Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0013064

Physical Location & Seq

Genomic Coordinates Forward (+)

51675222 .. 51685177

Gene Structure 9956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1415600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGTCGAGGGAGGAGGCGGAAAATGAAAAGAAATGGGCGGAGGAGGAGGAGGAGGAGCAGTGCCGTCTGTACGAGGCCTACAACGAACTCCACGGCCTCGCGCAGGCCTTCGACACTCCATTCGACGCGCCAGCGGTGCTTGTGGTGGGCCACCAGACCGACGGCAAGAGCGCCTTGGTGGAAGCACTTATGGGGTTCCAGTTCAACCATGTAGGCGGCGGCACCAAGACCCGCCGCCCAATTACCCTCCACATGAAGTACGACCCCCAAGCCCACTCCCCCGTCTGCCGCCTCCTCCTCCCCTCCGATTCCAGTTCCGATTACGAAAAGTCTCTCTCGCTCCAAGAAATTCAAGCCTACATTGAAGCTGAGAACATGAGGTTGGAGAAGGAGCCTTGTCTTTTCTCCGCTGAGGAGATCATCATTCGAGTCGAATACAAGTATTGCCCTAATCTTACCATTATCGACACTCCTGGACTAATCGCTCCTGCTCCTGGTCCAAAGAATCGAGCTTTACAGGGCCACGCTCGTGCTGTCGAAGCTCTAGTTCGTGCGAAAATGCAGCATAAAGAGTTCATAATTTTGTGTCTTGAAGATTGCAGTGACTGGAGTAATGCAACTACAAGAAGGGTTGTAATGCAGATTGATCCCGAGCTCTCAAGGACTGTGATTGTCTCAACCAAACTTGATACCAAAATACCCCAGTTTGCTCGTGCCTCGGATGTGGAAGTATTTCTCTCACCTCCCACTTGTATGCTCGATGGGTGTATCTTGGGAGACTCTCCCTTTTTCACTTCTGTGCCCTCTGGTAGAGTTGGCGTTGGCCATGATTCGGTTTACAGATGTAATGAAGATTTCAAAAAGGCAATATCATTAAGAGAGATGGAAGATGTTGCAAGCTTGGAGGAGAAAATGGGCCGGTCACTGTCAATACAAGAAAGAAGTCGAATAGGTGTAAGCAAACTTAGGTTGTTTTTGGAAGAATTACTACAGAAAAGGTATATGGATAATGTGCCACTAATCATTCCACTTCTTGAGAAGGAGTTCCGTAGCGCAACAAAAAAGATGAATGAAATAAATCAAGAACTCAGCACTTTGGATGAACTGAAACTGAAGGAGAAAGGAAGAATATTTCATGATCTGTTCTTGACAAAGTTATCATTGCTACTGAAAGGAACAGTTGTTGCACCTCCAGATAAATTTGGTGAAACGCTACAGGACGAGAGGACTAATGGAGGGGCATTTGTTAGCAGTGATGGCCTTCAGTTCCCCCACAAGCTTATACCCAATGCAGGAATGCGTCTATATGGGGGTGCACAATACCATCGTGCCATGGCTGAGTTCCGTTTTGTAGTTGGTGGTATAAAATGCCCTCCAATTACACGGGAAGAAATTGTAAATGCATGTGGAGTGGAAGATTTACATGATGGAACAAACTACTCAAGGACAGCTTGTGTAATAGCTGTTGCAAAGGCCCGTGATACATTTGAGCCTTTCCTCCATCAGTTAGGTTGTAGGCTCTTACACATTCTGAAGAGATTACTTCCTATATCAGTCTATCTTCTTCAGAAAGATGGTGAGTATTTAAGTGGCCATGAGGTGTTTCTGAGGCGTGTTGCCTCTGCTTTCAATGACTTTGCAGAATCTACTGAAAGGGCATGTCGTGAAAAATGCATGGAGGATTTAGTAAGCACCACCCGTTATGTCACCTGGTCTCTTCACAACAAGAATCGAGCTGGGTTACGTCAATTTTTAGACTCTTTCGCTGGAACAGAACATGCCACAACAGGTGGTAGTGGTGTATCTTCTGGTCTTTCCCAAGATTCATCCGTTGGGTCGGTCACCAGTGAGAAGGATACCAAGTCACGGGGAGATGTGAAGCTCAGCCATGTGGCCTCTGGCACTGATTTGACATCTTTTATTCATTCAACAGAAACAAGGCTGGCTGATCTTTTAGACAGTACACTTTGGAATAGGAGGCTTGCTCCTTCATCTGAAAGGATTGTTTATGCTTTGGTGCAGCAGATATTTCATGGCATAAAGGAATATTTCTTAGCCTCTGCAGAGTTGAAGTTCAACTGCTTTCTTCTGATGCCTGTTGTAGATAAGTTGCCTGCACTGCTTAGAGAAGACTTAAAATCTGCTTTTGAGGATGACTTGGATAATATTTTCGATATCACAAATCTGAGACGCTTATTAGGCCAGCGAAAGCGAGATGCAGAAATTGAGATTAAAAGGATCAAGAGGCTTAAGGACAAGTTCAGATCACTACATAAGCAGCTTAGTTCGAATCAAGCGATTGCTTCTGCCTTTCCCGACTACCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0007031 GO:0007623 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016559 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048511 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N WD40

Protein Analysis

776

Amino Acids

87.24

Weight (kDa)

6.24

Isoelectric Point (pI)

50.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	46 - 228	7.8e-31	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013064)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19720 AT3G19720 AT3G19720
fragaria_vesca	FvH4_5g30610 FvH4_5g30610 FvH4_5g30610
malus_domestica	MD08G1222200.v1.1 MD15G1415600.v1.1
prunus_persica	Prupe.1G560000_v2.0.a1
pyrus_communis	pycom08g19300
rosa_chinensis	RchiOBHm_Chr7g0225491
rosa_laevigata	RLG00000001812
rosa_multiflora	Rmu_sc0000259.1_g000003
rosa_roxburghii	Rroxscaffold_3G00233770
rosa_rugosa	Rorug07G0229900.1 Rorug07G0230000.1
rosa_samantha	Rh7AG373400
rosa_wichuraiana	Rw7G031700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	221
AccII	CGCG	2 cut(s)	101, 128
AciI	CCGC	9 cut(s)	17, 38, 134, 216, 219, 232, 235, 289, 408
AclWI	GGATC	2 cut(s)	641, 2246
AcoI	YGGCCR	2 cut(s)	823, 1591
AcsI	RAATTY	2 cut(s)	348, 1199
AcuI	CTGAAG	4 cut(s)	1133, 1247, 1550, 1553
AfaI	GTAC	3 cut(s)	71, 260, 1963
AfiI	CCNNNNNNNGG	5 cut(s)	103, 494, 832, 1292, 1866
AflII	CTTAAG	1 cut(s)	2249
AgsI	TTSAA	9 cut(s)	205, 353, 365, 593, 859, 1630, 1929, 2071, 2077
AjnI	CCWGG	3 cut(s)	472, 493, 1709
AjuI	GAANNNNNNNTTGG	2 cut(s)	365, 397
AleI	CACNNNNGTG	2 cut(s)	528, 797
Alw21I	GWGCWC	2 cut(s)	657, 1318
Alw26I	GTCTC	5 cut(s)	336, 679, 771, 1719, 2182
Alw44I	GTGCAC	1 cut(s)	1314
AlwI	GGATC	2 cut(s)	641, 2246
AlwNI	CAGNNNCTG	1 cut(s)	606
Ama87I	CYCGRG	1 cut(s)	650
ApaLI	GTGCAC	1 cut(s)	1314
ApeKI	GCWGC	3 cut(s)	562, 2020, 2278
ApoI	RAATTY	2 cut(s)	348, 1199
ArsI	GACNNNNNNTTYG	2 cut(s)	104, 136
Asp700I	GAANNNNTTC	2 cut(s)	732, 1043
AspLEI	GCGC	4 cut(s)	103, 130, 173, 1055
AspS9I	GGNCC	5 cut(s)	148, 497, 520, 916, 1474
AsuHPI	GGTGA	5 cut(s)	732, 1217, 1589, 1699, 1834
AsuII	TTCGAA	1 cut(s)	2288
AvaI	CYCGRG	1 cut(s)	650
AvaII	GGWCC	1 cut(s)	497
BaeGI	GKGCMC	2 cut(s)	804, 1318
BalI	TGGCCA	2 cut(s)	825, 1593
BanI	GGYRCC	1 cut(s)	221
BanII	GRGCYC	1 cut(s)	657
BarI	GAAGNNNNNNTAC	2 cut(s)	972, 1004
BauI	CACGAG	2 cut(s)	528, 711
BbsI	GAAGAC	1 cut(s)	2136
Bbv12I	GWGCWC	2 cut(s)	657, 1318
BbvCI	CCTCAGC	1 cut(s)	411
BbvI	GCAGC	3 cut(s)	574, 2032, 2290
BccI	CCATC	7 cut(s)	755, 877, 1250, 1332, 1421, 1509, 1568
BceAI	ACGGC	3 cut(s)	48, 109, 178
BciT130I	CCWGG	3 cut(s)	474, 495, 1711
BciVI	GTATCC	1 cut(s)	1849
BcoDI	GTCTC	5 cut(s)	336, 679, 771, 1719, 2182
BfaI	CTAG	1 cut(s)	545
BfmI	CTRYAG	3 cut(s)	989, 1214, 2061
BfoI	RGCGCY	1 cut(s)	174
BfrI	CTTAAG	1 cut(s)	2249
BfuI	GTATCC	1 cut(s)	1849
BisI	GCNGC	7 cut(s)	217, 220, 235, 289, 563, 2021, 2279
BlpI	GCTNAGC	1 cut(s)	1883
BlsI	GCNGC	7 cut(s)	218, 221, 236, 290, 564, 2022, 2280
Bme1390I	CCNGG	3 cut(s)	474, 495, 1711
Bme18I	GGWCC	1 cut(s)	497
BmeT110I	CYCGRG	1 cut(s)	650
BmgT120I	GGNCC	5 cut(s)	148, 497, 520, 916, 1474
BmiI	GGNNCC	3 cut(s)	197, 223, 393
BmrFI	CCNGG	3 cut(s)	474, 495, 1711
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	2 cut(s)	2082, 2206
BmuI	ACTGGG	1 cut(s)	697
BpiI	GAAGAC	1 cut(s)	2136
BplI	GAGNNNNNCTC	2 cut(s)	1969, 2001
BpmI	CTGGAG	2 cut(s)	628, 1176
Bpu10I	CCTNAGC	1 cut(s)	411
Bpu1102I	GCTNAGC	1 cut(s)	1883
Bpu14I	TTCGAA	1 cut(s)	2288
BpuEI	CTTGAG	3 cut(s)	643, 1055, 1426
BsaI	GGTCTC	1 cut(s)	1719
BsaJI	CCNNGG	4 cut(s)	91, 174, 717, 1332
BsaXI	ACNNNNNCTCC	2 cut(s)	44, 74
Bsc4I	CCNNNNNNNGG	5 cut(s)	103, 494, 832, 1292, 1866
Bse118I	RCCGGY	1 cut(s)	918
Bse1I	ACTGG	5 cut(s)	199, 312, 611, 703, 1845
Bse3DI	GCAATG	1 cut(s)	1160
BseBI	CCWGG	3 cut(s)	474, 495, 1711
BseDI	CCNNGG	4 cut(s)	91, 174, 717, 1332
BseGI	GGATG	4 cut(s)	727, 1105, 1826, 2158
BseLI	CCNNNNNNNGG	5 cut(s)	103, 494, 832, 1292, 1866
BseMI	GCAATG	1 cut(s)	1160
BseMII	CTCAG	7 cut(s)	360, 402, 1102, 1329, 1598, 1897, 2177
BseNI	ACTGG	5 cut(s)	199, 312, 611, 703, 1845
BseSI	GKGCMC	2 cut(s)	804, 1318
BseXI	GCAGC	3 cut(s)	574, 2032, 2290
BseYI	CCCAGC	1 cut(s)	1736
BsgI	GTGCAG	2 cut(s)	2039, 2100
Bsh1236I	CGCG	2 cut(s)	101, 128
BshNI	GGYRCC	1 cut(s)	221
BsiHKAI	GWGCWC	2 cut(s)	657, 1318
BsiHKCI	CYCGRG	1 cut(s)	650
BsiSI	CCGG	1 cut(s)	919
BslI	CCNNNNNNNGG	5 cut(s)	103, 494, 832, 1292, 1866
BsmAI	GTCTC	5 cut(s)	336, 679, 771, 1719, 2182
BsmBI	CGTCTC	1 cut(s)	2182
BsmI	GAATGC	1 cut(s)	1302
Bso31I	GGTCTC	1 cut(s)	1719
BsoBI	CYCGRG	1 cut(s)	650
Bsp119I	TTCGAA	1 cut(s)	2288
Bsp1286I	GDGCHC	3 cut(s)	657, 804, 1318
Bsp143I	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
Bsp1720I	GCTNAGC	1 cut(s)	1883
Bsp19I	CCATGG	1 cut(s)	1332
BspACI	CCGC	9 cut(s)	17, 38, 134, 216, 219, 232, 235, 289, 408
BspCNI	CTCAG	7 cut(s)	361, 403, 1101, 1330, 1599, 1896, 2178
BspFNI	CGCG	2 cut(s)	101, 128
BspHI	TCATGA	1 cut(s)	1135
BspLI	GGNNCC	3 cut(s)	197, 223, 393
BspMAI	CTGCAG	1 cut(s)	2065
BspPI	GGATC	2 cut(s)	641, 2246
BspT104I	TTCGAA	1 cut(s)	2288
BspT107I	GGYRCC	1 cut(s)	221
BspTI	CTTAAG	1 cut(s)	2249
BspTNI	GGTCTC	1 cut(s)	1719
BsrDI	GCAATG	1 cut(s)	1160
BsrFI	RCCGGY	1 cut(s)	918
BsrI	ACTGG	5 cut(s)	199, 312, 611, 703, 1845
BssAI	RCCGGY	1 cut(s)	918
BssECI	CCNNGG	4 cut(s)	91, 174, 717, 1332
BssMI	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
BssSI	CACGAG	2 cut(s)	528, 711
BssT1I	CCWWGG	2 cut(s)	174, 1332
Bst2BI	CACGAG	2 cut(s)	528, 711
Bst2UI	CCWGG	3 cut(s)	474, 495, 1711
Bst4CI	ACNGT	4 cut(s)	667, 927, 1180, 1961
Bst6I	CTCTTC	2 cut(s)	1529, 1722
BstAFI	CTTAAG	1 cut(s)	2249
BstBI	TTCGAA	1 cut(s)	2288
BstC8I	GCNNGC	7 cut(s)	105, 132, 898, 1944, 1983, 2115, 2204
BstDSI	CCRYGG	2 cut(s)	91, 1332
BstEII	GGTNACC	1 cut(s)	1840
BstENI	CCTNNNNNAGG	1 cut(s)	101
BstF5I	GGATG	4 cut(s)	727, 1105, 1826, 2158
BstFNI	CGCG	2 cut(s)	101, 128
BstH2I	RGCGCY	1 cut(s)	174
BstHHI	GCGC	4 cut(s)	103, 130, 173, 1055
BstKTI	GATC	6 cut(s)	420, 649, 1141, 1951, 2241, 2267
BstMAI	GTCTC	5 cut(s)	336, 679, 771, 1719, 2182
BstMBI	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
BstMWI	GCNNNNNNNGC	5 cut(s)	136, 539, 1257, 2119, 2199
BstNI	CCWGG	3 cut(s)	474, 495, 1711
BstNSI	RCATGY	3 cut(s)	1407, 1662, 1781
BstPI	GGTNACC	1 cut(s)	1840
BstSCI	CCNGG	3 cut(s)	472, 493, 1709
BstSFI	CTRYAG	3 cut(s)	989, 1214, 2061
BstSLI	GKGCMC	2 cut(s)	804, 1318
BstUI	CGCG	2 cut(s)	101, 128
BstV1I	GCAGC	3 cut(s)	574, 2032, 2290
BstV2I	GAAGAC	1 cut(s)	2136
BsuI	GTATCC	1 cut(s)	1849
BtgI	CCRYGG	2 cut(s)	91, 1332
BtsCI	GGATG	4 cut(s)	727, 1105, 1826, 2158
BtsI	GCAGTG	4 cut(s)	65, 607, 1258, 2117
BtsIMutI	CAGTG	7 cut(s)	65, 607, 923, 1258, 1852, 1902, 2117
Cac8I	GCNNGC	7 cut(s)	105, 132, 898, 1944, 1983, 2115, 2204
CaiI	CAGNNNCTG	1 cut(s)	606
CciI	TCATGA	1 cut(s)	1135
CfoI	GCGC	4 cut(s)	103, 130, 173, 1055
Cfr10I	RCCGGY	1 cut(s)	918
Cfr13I	GGNCC	5 cut(s)	148, 497, 520, 916, 1474
CseI	GACGC	3 cut(s)	134, 1289, 2199
CsiI	ACCWGGT	1 cut(s)	1709
Csp6I	GTAC	3 cut(s)	70, 259, 1962
CviQI	GTAC	3 cut(s)	70, 259, 1962
DpnI	GATC	6 cut(s)	419, 648, 1140, 1950, 2240, 2266
DpnII	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
EaeI	YGGCCR	2 cut(s)	823, 1591
Eam1104I	CTCTTC	2 cut(s)	1529, 1722
EarI	CTCTTC	2 cut(s)	1529, 1722
EciI	GGCGGA	2 cut(s)	32, 53
Ecl136II	GAGCTC	1 cut(s)	655
Eco130I	CCWWGG	2 cut(s)	174, 1332
Eco147I	AGGCCT	2 cut(s)	77, 107
Eco24I	GRGCYC	1 cut(s)	657
Eco31I	GGTCTC	1 cut(s)	1719
Eco32I	GATATC	1 cut(s)	2176
Eco47I	GGWCC	1 cut(s)	497
Eco53kI	GAGCTC	1 cut(s)	655
Eco57I	CTGAAG	4 cut(s)	1133, 1247, 1550, 1553
Eco88I	CYCGRG	1 cut(s)	650
Eco91I	GGTNACC	1 cut(s)	1840
EcoICRI	GAGCTC	1 cut(s)	655
EcoNI	CCTNNNNNAGG	1 cut(s)	101
EcoO65I	GGTNACC	1 cut(s)	1840
EcoRII	CCWGG	3 cut(s)	472, 493, 1709
EcoRV	GATATC	1 cut(s)	2176
EcoT14I	CCWWGG	2 cut(s)	174, 1332
EcoT22I	ATGCAT	2 cut(s)	1405, 1676
EcoT38I	GRGCYC	1 cut(s)	657
ErhI	CCWWGG	2 cut(s)	174, 1332
Esp3I	CGTCTC	1 cut(s)	2182
FalI	AAGNNNNNCTT	4 cut(s)	158, 190, 1435, 1467
FauI	CCCGC	1 cut(s)	239
Fnu4HI	GCNGC	7 cut(s)	217, 220, 235, 289, 563, 2021, 2279
FokI	GGATG	4 cut(s)	734, 1112, 1813, 2165
FriOI	GRGCYC	1 cut(s)	657
Fsp4HI	GCNGC	7 cut(s)	217, 220, 235, 289, 563, 2021, 2279
FspBI	CTAG	1 cut(s)	545
GlaI	GCGC	4 cut(s)	102, 129, 172, 1054
GluI	GCNGC	7 cut(s)	217, 220, 235, 289, 563, 2021, 2279
GsaI	CCCAGC	1 cut(s)	1740
GsuI	CTGGAG	2 cut(s)	628, 1176
HaeII	RGCGCY	1 cut(s)	174
HapII	CCGG	1 cut(s)	919
HgaI	GACGC	3 cut(s)	134, 1289, 2199
HhaI	GCGC	4 cut(s)	103, 130, 173, 1055
Hin6I	GCGC	4 cut(s)	101, 128, 171, 1053
HinP1I	GCGC	4 cut(s)	101, 128, 171, 1053
HindIII	AAGCTT	2 cut(s)	898, 1277
HpaII	CCGG	1 cut(s)	919
HphI	GGTGA	5 cut(s)	732, 1217, 1589, 1699, 1834
Hpy166II	GTNNAC	3 cut(s)	838, 1316, 1964
Hpy8I	GTNNAC	3 cut(s)	838, 1316, 1964
Hpy99I	CGWCG	2 cut(s)	128, 164
HpyAV	CCTTC	8 cut(s)	118, 382, 621, 1033, 1108, 1271, 1846, 1998
HpyCH4III	ACNGT	4 cut(s)	667, 927, 1180, 1961
HpyCH4IV	ACGT	1 cut(s)	1744
HpyF10VI	GCNNNNNNNGC	5 cut(s)	136, 539, 1257, 2119, 2199
HpySE526I	ACGT	1 cut(s)	1744
HspAI	GCGC	4 cut(s)	101, 128, 171, 1053
Kzo9I	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
LmnI	GCTCC	6 cut(s)	55, 345, 391, 490, 496, 1990
Lsp1109I	GCAGC	3 cut(s)	574, 2032, 2290
LweI	GCATC	2 cut(s)	2082, 2206
MabI	ACCWGGT	1 cut(s)	1709
MaeI	CTAG	1 cut(s)	545
MaeII	ACGT	1 cut(s)	1744
MaeIII	GTNAC	6 cut(s)	602, 921, 1705, 1740, 1840, 1863
MalI	GATC	6 cut(s)	419, 648, 1140, 1950, 2240, 2266
MboI	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
MhlI	GDGCHC	3 cut(s)	657, 804, 1318
MlsI	TGGCCA	2 cut(s)	825, 1593
MluCI	AATT	9 cut(s)	240, 348, 579, 983, 1199, 1377, 1392, 1748, 2223
MluNI	TGGCCA	2 cut(s)	825, 1593
MlyI	GAGTC	3 cut(s)	438, 773, 1751
MmeI	TCCRAC	1 cut(s)	363
Mox20I	TGGCCA	2 cut(s)	825, 1593
Mph1103I	ATGCAT	2 cut(s)	1405, 1676
MroXI	GAANNNNTTC	2 cut(s)	732, 1043
MscI	TGGCCA	2 cut(s)	825, 1593
MseI	TTAA	5 cut(s)	875, 1586, 2135, 2232, 2250
MslI	CAYNNNNRTG	3 cut(s)	528, 752, 797
Msp20I	TGGCCA	2 cut(s)	825, 1593
MspA1I	CMGCKG	2 cut(s)	134, 410
MspCI	CTTAAG	1 cut(s)	2249
MspI	CCGG	1 cut(s)	919
MspR9I	CCNGG	3 cut(s)	474, 495, 1711
Mva1269I	GAATGC	1 cut(s)	1302
MvaI	CCWGG	3 cut(s)	474, 495, 1711
MvnI	CGCG	2 cut(s)	101, 128
MwoI	GCNNNNNNNGC	5 cut(s)	136, 539, 1257, 2119, 2199
NcoI	CCATGG	1 cut(s)	1332
NdeII	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
NlaIV	GGNNCC	3 cut(s)	197, 223, 393
NmuCI	GTSAC	5 cut(s)	602, 921, 1705, 1840, 1863
NsiI	ATGCAT	2 cut(s)	1405, 1676
NspI	RCATGY	3 cut(s)	1407, 1662, 1781
NspV	TTCGAA	1 cut(s)	2288
OliI	CACNNNNGTG	2 cut(s)	528, 797
PagI	TCATGA	1 cut(s)	1135
PceI	AGGCCT	2 cut(s)	77, 107
PcsI	WCGNNNNNNNCGW	1 cut(s)	2294
PctI	GAATGC	1 cut(s)	1302
PdmI	GAANNNNTTC	2 cut(s)	732, 1043
PfeI	GAWTC	7 cut(s)	308, 505, 830, 1643, 1729, 1823, 2290
PfoI	TCCNGGA	1 cut(s)	472
PkrI	GCNGC	7 cut(s)	218, 221, 236, 290, 564, 2022, 2280
PleI	GAGTC	3 cut(s)	437, 773, 1751
PpsI	GAGTC	3 cut(s)	437, 773, 1751
Psp124BI	GAGCTC	1 cut(s)	657
Psp6I	CCWGG	3 cut(s)	472, 493, 1709
PspEI	GGTNACC	1 cut(s)	1840
PspFI	CCCAGC	1 cut(s)	1736
PspGI	CCWGG	3 cut(s)	472, 493, 1709
PspN4I	GGNNCC	3 cut(s)	197, 223, 393
PspPI	GGNCC	5 cut(s)	148, 497, 520, 916, 1474
PstI	CTGCAG	1 cut(s)	2065
PstNI	CAGNNNCTG	1 cut(s)	606
RsaI	GTAC	3 cut(s)	71, 260, 1963
RsaNI	GTAC	3 cut(s)	70, 259, 1962
RseI	CAYNNNNRTG	3 cut(s)	528, 752, 797
SacI	GAGCTC	1 cut(s)	657
SaqAI	TTAA	5 cut(s)	875, 1586, 2135, 2232, 2250
SatI	GCNGC	7 cut(s)	217, 220, 235, 289, 563, 2021, 2279
Sau3AI	GATC	6 cut(s)	417, 646, 1138, 1948, 2238, 2264
Sau96I	GGNCC	5 cut(s)	148, 497, 520, 916, 1474
SchI	GAGTC	3 cut(s)	438, 773, 1751
ScrFI	CCNGG	3 cut(s)	474, 495, 1711
SduI	GDGCHC	3 cut(s)	657, 804, 1318
SexAI	ACCWGGT	1 cut(s)	1709
SfaNI	GCATC	2 cut(s)	2082, 2206
SfcI	CTRYAG	3 cut(s)	989, 1214, 2061
SfuI	TTCGAA	1 cut(s)	2288
SinI	GGWCC	1 cut(s)	497
SmiMI	CAYNNNNRTG	3 cut(s)	528, 752, 797
SmlI	CTYRAG	4 cut(s)	658, 1034, 1441, 2249
SmoI	CTYRAG	4 cut(s)	658, 1034, 1441, 2249
Sse9I	AATT	9 cut(s)	240, 348, 579, 983, 1199, 1377, 1392, 1748, 2223
SseBI	AGGCCT	2 cut(s)	77, 107
SsiI	CCGC	9 cut(s)	17, 38, 134, 216, 219, 232, 235, 289, 408
SspI	AATATT	3 cut(s)	1131, 2048, 2167
SspMI	CTAG	1 cut(s)	545
SstI	GAGCTC	1 cut(s)	657
StuI	AGGCCT	2 cut(s)	77, 107
StyD4I	CCNGG	3 cut(s)	472, 493, 1709
StyI	CCWWGG	2 cut(s)	174, 1332
TaaI	ACNGT	4 cut(s)	667, 927, 1180, 1961
TaiI	ACGT	1 cut(s)	1747
TaqII	GACCGA	2 cut(s)	173, 1828
TasI	AATT	9 cut(s)	240, 348, 579, 983, 1199, 1377, 1392, 1748, 2223
TatI	WGTACW	1 cut(s)	1961
TauI	GCSGC	4 cut(s)	219, 222, 237, 291
TfiI	GAWTC	7 cut(s)	308, 505, 830, 1643, 1729, 1823, 2290
Tru1I	TTAA	5 cut(s)	875, 1586, 2135, 2232, 2250
Tru9I	TTAA	5 cut(s)	875, 1586, 2135, 2232, 2250
TscAI	CASTG	7 cut(s)	65, 607, 930, 1258, 1852, 1909, 2124
TseFI	GTSAC	5 cut(s)	602, 921, 1705, 1840, 1863
TseI	GCWGC	3 cut(s)	562, 2020, 2278
Tsp45I	GTSAC	5 cut(s)	602, 921, 1705, 1840, 1863
TspGWI	ACGGA	3 cut(s)	1037, 1334, 1819
TspRI	CASTG	7 cut(s)	65, 607, 930, 1258, 1852, 1909, 2124
Vha464I	CTTAAG	1 cut(s)	2249
VneI	GTGCAC	1 cut(s)	1314
VpaK11BI	GGWCC	1 cut(s)	497
XagI	CCTNNNNNAGG	1 cut(s)	101
XapI	RAATTY	2 cut(s)	348, 1199
XceI	RCATGY	3 cut(s)	1407, 1662, 1781
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1895
XmnI	GAANNNNTTC	2 cut(s)	732, 1043
XspI	CTAG	1 cut(s)	545
Zsp2I	ATGCAT	2 cut(s)	1405, 1676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.