Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0013064

Physical Location & Seq

Genomic Coordinates Forward (+)

48216080 .. 48224809

Gene Structure 8730 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG373400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGGATAGGGACGAACGAAGCGAATGGGAGGAGCAGTGCCGTCTGTACGAGGCCTACAACGAGCTCCACGGCCTCGCCCAAGCCTTCGACACTCCCTTCGACGCTCCCGCCGTCCTCGTCGTCGGCCACCAGACAGATGGCAAGAGCGCATTGGTCGAAGCCCTCATGGGCTTCCAGTTCAACCACGTCGGTGGCGGCACCAAGACCCGCCGCCCCATCACTCTCCACATGAAGTACGACCCGGACTCCCACTCCCCTCTCTGCCGCCTCGTCTCCGACTCCGACCCGGCCCAGGCCCACCCCAAGTCCCTCCAGGACATCCAGGCTTACATTGAGGCCGAGAACATGAGGCTCGAGAAGGAGCCTTGTCTCTTCTCGGCCAAGGAGATCATTATTAGAGTGGAGTACAAGTACTGCCCCAACCTCACCATTATCGACACTCCTGGCCTCATTGCTCCTGCTCCCGGCCCCAAAAATCGAGCATTGCAGGTTCAAGCTCGTGCGGTGGAAGCACTCGTACGAGCTAAAATGCAGCATAAAGAGCTCATTATATTGTGTCTTGAAGATTGCAGTGACTGGAGTAATGCAACTACGCGGAGGGTAGTAATGCAAATCGATCCTGAGCTCTCGAGGACTGTAATTGTTTCAACCAAGCTCGATACGAAAATACCCCAGTTTGCACGGTCATCAGACGTGGAAGTGTTTCTGTCACCTCCCACATGTATGCTCGATGGGTGCATCTTGGGAGACTCGCCTTTCTTTACTTCTGTGCCGTCTGGAAGAGTTGGTTTTGGACATGATTCGGTTTACAGATCTAATGATGAGTTTAAACAGGCAATATCTGTAAGAGAAAAGGAAGATGTTGCAAGCTTAGAGGAAAAATTGGGCCGGTCACTGTCTGTACAAGAGAGAAGTAGGATAGGTGTAAGTAAACTTAGGTGTTTTCTGGAAGAATTGCTACAGAAAAGGTACATGGAAAATGTACCACTGATCATTCCACTTCTTGAGAAGGAATACCGGAGTGCAACAAGAAGGATGAATGAAATAAATCAAGAACTCAGCACTTTGGATGAACTGAAACTAAAGGAGAAAGGGAGATTATTTCACGATATGTTCTTGACGAAGTTATCATTGCTATTGAAAGGAACAGTTGTTGCACCGCCAGACAAATTTGGAGAAACACTACAAGATGAGCGAACTAACGGAGGAGCATTTGTCAGTAGCGATGGCCTTCAGTTCCCTCACAAGCTTATACCTAATGCAGGAATGCGTCTTTATGGGGGTGCACAATACCATCGTGCCATGGCTGAGTTTCGTTTTGTAGTTGGAGGAACAAAATGCCCTCCAATTACAAGGGAAGAAATCGTGAATGCATGTGGAGTTGAAGATTTACATGATGGAACAAACTACTCTAGGACAGCTTGTGTAATAGCTGTTGCAAAGGCTCGTGATACATTTGAGCCTTTCCTTCATCAGTTGGGTGGTAGACTCTTGCATATTCTGAAGAGATTGCTTCCAATATCTGTTTATCTTCTTCAGAAAGATGGTGAGTATTTGAGTGGCCATGAGGTGTTTCTCAGGCGTGTTGCCTCTGCATTCAATGACTTTGCAGAATCTACCGAAAGGGCATGTCGTGAAAAATGTATGGAGGATTTAGTAAGCACTACACGCTACGTCACATGGTCTCTTCACAATAAGAATCGTGCTGGGTTACGTCAGTTCTTGGACTCGTTTTCTGGAACAGAACATACCACTGTGGGTGGTACTTCTGTGTCTTCTGGTCTTTCTCAAGATTCAGCAGTTGGGTCAGTCGCCAATGAGAAGGACACCAAGTCACGGGCAGATGTGAAGCTCAGTCATCTGGCCTCTGGCAATGACTTGACTTCTATTCAAACTACAGAAACAAGGCTGGCTGATCTGCTAGATAGTACACTTTGGAATAGGAAACTTGCTCCTTCATCTGAAAGGATTGTTTATGCTTTGGTGCAGCAGATATTTCATGGCATAAGAGAATATTTCTTGGCCTCCGCAGAGTTGAAGTTCAACTGCTTTCTCTTGATGCCTGTTGTAGATAAGTTGCCTGCACTCCTTAGAGAAGACTTGAAATCTGCTTTTGAAGATGATTTGGATAATATTTTTGATATCACAAACCTGCGGAACTTATTGGGCCAGCGAAAGCGAGACGTAGAGGTTGAGCTTAAAAGGATCAAGAGGCTTAAGGATAAATTCAGATCACTACATGAGCAGCTGAGTTCGGTTAGACGCAATGCTAATGTCTTTTCTGACTCCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0007031 GO:0007623 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016559 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048511 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N WD40

Protein Analysis

764

Amino Acids

86.05

Weight (kDa)

6.5

Isoelectric Point (pI)

46.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	38 - 218	9.3e-31	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013064)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19720 AT3G19720 AT3G19720
fragaria_vesca	FvH4_5g30610 FvH4_5g30610 FvH4_5g30610
malus_domestica	MD08G1222200.v1.1 MD15G1415600.v1.1
prunus_persica	Prupe.1G560000_v2.0.a1
pyrus_communis	pycom08g19300
rosa_chinensis	RchiOBHm_Chr7g0225491
rosa_laevigata	RLG00000001812
rosa_multiflora	Rmu_sc0000259.1_g000003
rosa_roxburghii	Rroxscaffold_3G00233770
rosa_rugosa	Rorug07G0229900.1 Rorug07G0230000.1
rosa_samantha	Rh7AG373400
rosa_wichuraiana	Rw7G031700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	478, 2160
AccB1I	GGYRCC	1 cut(s)	197
AccI	GTMKAC	1 cut(s)	1486
AccII	CGCG	1 cut(s)	595
AclWI	GGATC	2 cut(s)	611, 2213
AcoI	YGGCCR	3 cut(s)	124, 378, 1561
AcsI	RAATTY	2 cut(s)	1169, 2225
AcuI	CTGAAG	3 cut(s)	1217, 1520, 1523
AfiI	CCNNNNNNNGG	4 cut(s)	292, 464, 1262, 1836
AflII	CTTAAG	1 cut(s)	2216
AflIII	ACRYGT	1 cut(s)	719
AhdI	GACNNNNNGTC	1 cut(s)	1831
AjiI	CACGTC	2 cut(s)	187, 694
AjnI	CCWGG	4 cut(s)	291, 312, 321, 442
AleI	CACNNNNGTG	1 cut(s)	189
Alw21I	GWGCWC	4 cut(s)	66, 546, 627, 1288
Alw26I	GTCTC	5 cut(s)	277, 374, 741, 1689, 2175
Alw44I	GTGCAC	1 cut(s)	1284
AlwI	GGATC	2 cut(s)	611, 2213
AlwNI	CAGNNNCTG	1 cut(s)	576
Ama87I	CYCGRG	2 cut(s)	353, 628
ApaLI	GTGCAC	1 cut(s)	1284
ApeKI	GCWGC	3 cut(s)	532, 1987, 2245
ApoI	RAATTY	2 cut(s)	1169, 2225
ArsI	GACNNNNNNTTYG	2 cut(s)	80, 112
Asp700I	GAANNNNTTC	1 cut(s)	702
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	5 cut(s)	289, 295, 467, 886, 2167
AsuC2I	CCSGG	3 cut(s)	242, 287, 465
AsuHPI	GGTGA	3 cut(s)	418, 702, 1559
AvaI	CYCGRG	2 cut(s)	353, 628
BaeGI	GKGCMC	1 cut(s)	1288
BaeI	ACNNNNGTAYC	2 cut(s)	1755, 1788
BalI	TGGCCA	1 cut(s)	1563
BanI	GGYRCC	1 cut(s)	197
BanII	GRGCYC	3 cut(s)	66, 546, 627
BarI	GAAGNNNNNNTAC	4 cut(s)	501, 533, 942, 974
BauI	CACGAG	2 cut(s)	498, 1446
BbsI	GAAGAC	2 cut(s)	1767, 2103
Bbv12I	GWGCWC	4 cut(s)	66, 546, 627, 1288
BbvI	GCAGC	3 cut(s)	544, 1999, 2257
BccI	CCATC	7 cut(s)	131, 224, 725, 1220, 1302, 1391, 1538
BceAI	ACGGC	4 cut(s)	24, 85, 95, 757
BciT130I	CCWGG	4 cut(s)	293, 314, 323, 444
BclI	TGATCA	1 cut(s)	990
BcnI	CCSGG	3 cut(s)	242, 287, 465
BcoDI	GTCTC	5 cut(s)	277, 374, 741, 1689, 2175
BfaI	CTAG	2 cut(s)	1413, 1922
BfmI	CTRYAG	2 cut(s)	959, 1896
BfrI	CTTAAG	1 cut(s)	2216
BfuAI	ACCTGC	2 cut(s)	478, 2160
BglII	AGATCT	1 cut(s)	812
BisI	GCNGC	6 cut(s)	196, 211, 265, 533, 1988, 2246
BlsI	GCNGC	6 cut(s)	197, 212, 266, 534, 1989, 2247
BmcAI	AGTACT	1 cut(s)	413
Bme1390I	CCNGG	7 cut(s)	242, 287, 293, 314, 323, 444, 465
BmeRI	GACNNNNNGTC	1 cut(s)	1831
BmeT110I	CYCGRG	2 cut(s)	353, 628
BmgBI	CACGTC	2 cut(s)	187, 694
BmgT120I	GGNCC	5 cut(s)	289, 295, 467, 886, 2167
BmiI	GGNNCC	3 cut(s)	199, 363, 469
BmrFI	CCNGG	7 cut(s)	242, 287, 293, 314, 323, 444, 465
BmrI	ACTGGG	1 cut(s)	667
BmsI	GCATC	2 cut(s)	747, 2049
BmuI	ACTGGG	1 cut(s)	667
BpiI	GAAGAC	2 cut(s)	1767, 2103
BpmI	CTGGAG	3 cut(s)	296, 598, 2272
Bpu10I	CCTNAGC	1 cut(s)	621
BpuEI	CTTGAG	2 cut(s)	1025, 1773
BpuMI	CCSGG	3 cut(s)	242, 287, 465
Bsa29I	ATCGAT	1 cut(s)	615
BsaI	GGTCTC	1 cut(s)	1689
BsaJI	CCNNGG	4 cut(s)	67, 291, 381, 1302
BsaWI	WCCGGW	1 cut(s)	1017
Bsc4I	CCNNNNNNNGG	4 cut(s)	292, 464, 1262, 1836
Bse118I	RCCGGY	1 cut(s)	888
Bse1I	ACTGG	4 cut(s)	175, 581, 673, 2289
Bse3DI	GCAATG	5 cut(s)	450, 482, 1130, 1879, 2272
BseBI	CCWGG	4 cut(s)	293, 314, 323, 444
BseCI	ATCGAT	1 cut(s)	615
BseDI	CCNNGG	4 cut(s)	67, 291, 381, 1302
BseGI	GGATG	3 cut(s)	318, 1041, 1075
BseLI	CCNNNNNNNGG	4 cut(s)	292, 464, 1262, 1836
BseMI	GCAATG	5 cut(s)	450, 482, 1130, 1879, 2272
BseMII	CTCAG	6 cut(s)	612, 1072, 1299, 1591, 1867, 2240
BseNI	ACTGG	4 cut(s)	175, 581, 673, 2289
BseRI	GAGGAG	2 cut(s)	44, 1221
BseSI	GKGCMC	1 cut(s)	1288
BseXI	GCAGC	3 cut(s)	544, 1999, 2257
BseYI	CCCAGC	1 cut(s)	1706
BsgI	GTGCAG	2 cut(s)	2006, 2067
Bsh1236I	CGCG	1 cut(s)	595
BshNI	GGYRCC	1 cut(s)	197
BshVI	ATCGAT	1 cut(s)	615
BsiHKAI	GWGCWC	4 cut(s)	66, 546, 627, 1288
BsiHKCI	CYCGRG	2 cut(s)	353, 628
BsiSI	CCGG	5 cut(s)	242, 287, 465, 889, 1018
BsiWI	CGTACG	1 cut(s)	517
BslFI	GGGAC	2 cut(s)	23, 292
BslI	CCNNNNNNNGG	4 cut(s)	292, 464, 1262, 1836
BsmAI	GTCTC	5 cut(s)	277, 374, 741, 1689, 2175
BsmBI	CGTCTC	2 cut(s)	277, 2175
BsmFI	GGGAC	2 cut(s)	23, 292
BsmI	GAATGC	3 cut(s)	1272, 1375, 1595
Bso31I	GGTCTC	1 cut(s)	1689
BsoBI	CYCGRG	2 cut(s)	353, 628
Bsp1286I	GDGCHC	4 cut(s)	66, 546, 627, 1288
Bsp1407I	TGTACA	1 cut(s)	901
Bsp143I	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
Bsp19I	CCATGG	1 cut(s)	1302
BspCNI	CTCAG	6 cut(s)	613, 1071, 1300, 1590, 1866, 2241
BspDI	ATCGAT	1 cut(s)	615
BspFNI	CGCG	1 cut(s)	595
BspLI	GGNNCC	3 cut(s)	199, 363, 469
BspMI	ACCTGC	2 cut(s)	478, 2160
BspPI	GGATC	2 cut(s)	611, 2213
BspT107I	GGYRCC	1 cut(s)	197
BspTI	CTTAAG	1 cut(s)	2216
BspTNI	GGTCTC	1 cut(s)	1689
BsrDI	GCAATG	5 cut(s)	450, 482, 1130, 1879, 2272
BsrFI	RCCGGY	1 cut(s)	888
BsrGI	TGTACA	1 cut(s)	901
BsrI	ACTGG	4 cut(s)	175, 581, 673, 2289
BssAI	RCCGGY	1 cut(s)	888
BssECI	CCNNGG	4 cut(s)	67, 291, 381, 1302
BssMI	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
BssSI	CACGAG	2 cut(s)	498, 1446
BssT1I	CCWWGG	2 cut(s)	381, 1302
Bst2BI	CACGAG	2 cut(s)	498, 1446
Bst2UI	CCWGG	4 cut(s)	293, 314, 323, 444
Bst4CI	ACNGT	5 cut(s)	637, 684, 897, 1150, 1756
Bst6I	CTCTTC	4 cut(s)	377, 775, 1499, 1692
BstAFI	CTTAAG	1 cut(s)	2216
BstAUI	TGTACA	1 cut(s)	901
BstC8I	GCNNGC	4 cut(s)	868, 1911, 2082, 2171
BstDEI	CTNAG	9 cut(s)	621, 871, 935, 1058, 1308, 1577, 1853, 2090, 2249
BstDSI	CCRYGG	2 cut(s)	67, 1302
BstENI	CCTNNNNNAGG	1 cut(s)	1260
BstF5I	GGATG	3 cut(s)	318, 1041, 1075
BstFNI	CGCG	1 cut(s)	595
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	7 cut(s)	390, 619, 815, 993, 1918, 2208, 2234
BstMAI	GTCTC	5 cut(s)	277, 374, 741, 1689, 2175
BstMBI	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
BstMWI	GCNNNNNNNGC	3 cut(s)	509, 541, 1668
BstNI	CCWGG	4 cut(s)	293, 314, 323, 444
BstNSI	RCATGY	3 cut(s)	723, 1377, 1632
BstSCI	CCNGG	7 cut(s)	240, 285, 291, 312, 321, 442, 463
BstSFI	CTRYAG	2 cut(s)	959, 1896
BstSLI	GKGCMC	1 cut(s)	1288
BstUI	CGCG	1 cut(s)	595
BstV1I	GCAGC	3 cut(s)	544, 1999, 2257
BstV2I	GAAGAC	2 cut(s)	1767, 2103
BstX2I	RGATCY	1 cut(s)	812
BstXI	CCANNNNNNTGG	2 cut(s)	137, 191
BstYI	RGATCY	1 cut(s)	812
Bsu15I	ATCGAT	1 cut(s)	615
BsuTUI	ATCGAT	1 cut(s)	615
BtgI	CCRYGG	2 cut(s)	67, 1302
BtgZI	GCGATG	1 cut(s)	1239
BtrI	CACGTC	2 cut(s)	187, 694
BtsCI	GGATG	3 cut(s)	318, 1041, 1075
BtsI	GCAGTG	2 cut(s)	41, 577
BtsIMutI	CAGTG	5 cut(s)	41, 577, 893, 986, 1752
BveI	ACCTGC	2 cut(s)	478, 2160
Cac8I	GCNNGC	4 cut(s)	868, 1911, 2082, 2171
CaiI	CAGNNNCTG	1 cut(s)	576
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	1 cut(s)	888
Cfr13I	GGNCC	5 cut(s)	289, 295, 467, 886, 2167
ClaI	ATCGAT	1 cut(s)	615
CseI	GACGC	3 cut(s)	110, 1259, 2271
DdeI	CTNAG	9 cut(s)	621, 871, 935, 1058, 1308, 1577, 1853, 2090, 2249
DpnI	GATC	7 cut(s)	389, 618, 814, 992, 1917, 2207, 2233
DpnII	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
DraI	TTTAAA	1 cut(s)	829
DriI	GACNNNNNGTC	1 cut(s)	1831
EaeI	YGGCCR	3 cut(s)	124, 378, 1561
Eam1104I	CTCTTC	4 cut(s)	377, 775, 1499, 1692
Eam1105I	GACNNNNNGTC	1 cut(s)	1831
EarI	CTCTTC	4 cut(s)	377, 775, 1499, 1692
Ecl136II	GAGCTC	3 cut(s)	64, 544, 625
Eco130I	CCWWGG	2 cut(s)	381, 1302
Eco147I	AGGCCT	1 cut(s)	53
Eco24I	GRGCYC	3 cut(s)	66, 546, 627
Eco31I	GGTCTC	1 cut(s)	1689
Eco32I	GATATC	1 cut(s)	2143
Eco53kI	GAGCTC	3 cut(s)	64, 544, 625
Eco57I	CTGAAG	3 cut(s)	1217, 1520, 1523
Eco88I	CYCGRG	2 cut(s)	353, 628
EcoICRI	GAGCTC	3 cut(s)	64, 544, 625
EcoNI	CCTNNNNNAGG	1 cut(s)	1260
EcoRII	CCWGG	4 cut(s)	291, 312, 321, 442
EcoRV	GATATC	1 cut(s)	2143
EcoT14I	CCWWGG	2 cut(s)	381, 1302
EcoT22I	ATGCAT	1 cut(s)	1375
EcoT38I	GRGCYC	3 cut(s)	66, 546, 627
ErhI	CCWWGG	2 cut(s)	381, 1302
Esp3I	CGTCTC	2 cut(s)	277, 2175
FaqI	GGGAC	2 cut(s)	23, 292
FauI	CCCGC	2 cut(s)	115, 215
FbaI	TGATCA	1 cut(s)	990
FblI	GTMKAC	1 cut(s)	1486
Fnu4HI	GCNGC	6 cut(s)	196, 211, 265, 533, 1988, 2246
FokI	GGATG	3 cut(s)	305, 1048, 1082
FriOI	GRGCYC	3 cut(s)	66, 546, 627
Fsp4HI	GCNGC	6 cut(s)	196, 211, 265, 533, 1988, 2246
FspBI	CTAG	2 cut(s)	1413, 1922
GlaI	GCGC	1 cut(s)	148
GluI	GCNGC	6 cut(s)	196, 211, 265, 533, 1988, 2246
GsaI	CCCAGC	1 cut(s)	1710
GsuI	CTGGAG	3 cut(s)	296, 598, 2272
HapII	CCGG	5 cut(s)	242, 287, 465, 889, 1018
HgaI	GACGC	3 cut(s)	110, 1259, 2271
HhaI	GCGC	1 cut(s)	149
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HindIII	AAGCTT	2 cut(s)	868, 1247
HpaII	CCGG	5 cut(s)	242, 287, 465, 889, 1018
HphI	GGTGA	3 cut(s)	418, 702, 1559
Hpy166II	GTNNAC	5 cut(s)	808, 932, 1286, 1487, 1931
Hpy188I	TCNGA	8 cut(s)	277, 283, 691, 1503, 1539, 1963, 2231, 2284
Hpy8I	GTNNAC	5 cut(s)	808, 932, 1286, 1487, 1931
Hpy99I	CGWCG	4 cut(s)	104, 122, 125, 191
HpyAV	CCTTC	9 cut(s)	94, 106, 352, 1003, 1026, 1241, 1478, 1816, 1965
HpyCH4III	ACNGT	5 cut(s)	637, 684, 897, 1150, 1756
HpyCH4IV	ACGT	5 cut(s)	186, 693, 1674, 1714, 2184
HpyF10VI	GCNNNNNNNGC	3 cut(s)	509, 541, 1668
HpyF3I	CTNAG	9 cut(s)	621, 871, 935, 1058, 1308, 1577, 1853, 2090, 2249
HpySE526I	ACGT	5 cut(s)	186, 693, 1674, 1714, 2184
HspAI	GCGC	1 cut(s)	147
Ksp22I	TGATCA	1 cut(s)	990
Kzo9I	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
LmnI	GCTCC	8 cut(s)	31, 69, 109, 361, 460, 466, 1208, 1957
Lsp1109I	GCAGC	3 cut(s)	544, 1999, 2257
LweI	GCATC	2 cut(s)	747, 2049
MaeI	CTAG	2 cut(s)	1413, 1922
MaeII	ACGT	5 cut(s)	186, 693, 1674, 1714, 2184
MaeIII	GTNAC	6 cut(s)	572, 708, 891, 1675, 1710, 1833
MalI	GATC	7 cut(s)	389, 618, 814, 992, 1917, 2207, 2233
MboI	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
MflI	RGATCY	1 cut(s)	812
MhlI	GDGCHC	4 cut(s)	66, 546, 627, 1288
MlsI	TGGCCA	1 cut(s)	1563
MluCI	AATT	6 cut(s)	639, 881, 953, 1169, 1347, 2225
MluNI	TGGCCA	1 cut(s)	1563
MlyI	GAGTC	6 cut(s)	239, 272, 743, 1482, 1721, 2279
MmeI	TCCRAC	3 cut(s)	300, 306, 1306
Mox20I	TGGCCA	1 cut(s)	1563
Mph1103I	ATGCAT	1 cut(s)	1375
MroXI	GAANNNNTTC	1 cut(s)	702
MscI	TGGCCA	1 cut(s)	1563
MseI	TTAA	3 cut(s)	828, 2199, 2217
MslI	CAYNNNNRTG	2 cut(s)	189, 722
Msp20I	TGGCCA	1 cut(s)	1563
MspA1I	CMGCKG	1 cut(s)	2248
MspCI	CTTAAG	1 cut(s)	2216
MspI	CCGG	5 cut(s)	242, 287, 465, 889, 1018
MspR9I	CCNGG	7 cut(s)	242, 287, 293, 314, 323, 444, 465
MssI	GTTTAAAC	1 cut(s)	829
Mva1269I	GAATGC	3 cut(s)	1272, 1375, 1595
MvaI	CCWGG	4 cut(s)	293, 314, 323, 444
MvnI	CGCG	1 cut(s)	595
MwoI	GCNNNNNNNGC	3 cut(s)	509, 541, 1668
NciI	CCSGG	3 cut(s)	242, 287, 465
NcoI	CCATGG	1 cut(s)	1302
NdeII	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
NlaIV	GGNNCC	3 cut(s)	199, 363, 469
NmeAIII	GCCGAG	2 cut(s)	356, 364
NmuCI	GTSAC	5 cut(s)	572, 708, 891, 1675, 1833
NsiI	ATGCAT	1 cut(s)	1375
NspI	RCATGY	3 cut(s)	723, 1377, 1632
OliI	CACNNNNGTG	1 cut(s)	189
PaeR7I	CTCGAG	2 cut(s)	353, 628
PceI	AGGCCT	1 cut(s)	53
PciI	ACATGT	1 cut(s)	719
PcsI	WCGNNNNNNNCGW	2 cut(s)	18, 108
PctI	GAATGC	3 cut(s)	1272, 1375, 1595
PdmI	GAANNNNTTC	1 cut(s)	702
PfeI	GAWTC	4 cut(s)	800, 1613, 1699, 1793
Pfl23II	CGTACG	1 cut(s)	517
PfoI	TCCNGGA	1 cut(s)	312
PkrI	GCNGC	6 cut(s)	197, 212, 266, 534, 1989, 2247
PleI	GAGTC	6 cut(s)	239, 272, 743, 1482, 1721, 2279
PmeI	GTTTAAAC	1 cut(s)	829
PpsI	GAGTC	6 cut(s)	239, 272, 743, 1482, 1721, 2279
PscI	ACATGT	1 cut(s)	719
Psp124BI	GAGCTC	3 cut(s)	66, 546, 627
Psp6I	CCWGG	4 cut(s)	291, 312, 321, 442
PspFI	CCCAGC	1 cut(s)	1706
PspGI	CCWGG	4 cut(s)	291, 312, 321, 442
PspLI	CGTACG	1 cut(s)	517
PspN4I	GGNNCC	3 cut(s)	199, 363, 469
PspPI	GGNCC	5 cut(s)	289, 295, 467, 886, 2167
PsrI	GAACNNNNNNTAC	2 cut(s)	1732, 1764
PstNI	CAGNNNCTG	1 cut(s)	576
PsuI	RGATCY	1 cut(s)	812
PvuII	CAGCTG	1 cut(s)	2248
RseI	CAYNNNNRTG	2 cut(s)	189, 722
SacI	GAGCTC	3 cut(s)	66, 546, 627
SaqAI	TTAA	3 cut(s)	828, 2199, 2217
SatI	GCNGC	6 cut(s)	196, 211, 265, 533, 1988, 2246
Sau3AI	GATC	7 cut(s)	387, 616, 812, 990, 1915, 2205, 2231
Sau96I	GGNCC	5 cut(s)	289, 295, 467, 886, 2167
ScaI	AGTACT	1 cut(s)	413
SchI	GAGTC	6 cut(s)	239, 272, 743, 1482, 1721, 2279
ScrFI	CCNGG	7 cut(s)	242, 287, 293, 314, 323, 444, 465
SduI	GDGCHC	4 cut(s)	66, 546, 627, 1288
SfaNI	GCATC	2 cut(s)	747, 2049
SfcI	CTRYAG	2 cut(s)	959, 1896
Sfr274I	CTCGAG	2 cut(s)	353, 628
SlaI	CTCGAG	2 cut(s)	353, 628
SmiMI	CAYNNNNRTG	2 cut(s)	189, 722
SmlI	CTYRAG	5 cut(s)	353, 628, 1004, 1788, 2216
SmoI	CTYRAG	5 cut(s)	353, 628, 1004, 1788, 2216
Sse9I	AATT	6 cut(s)	639, 881, 953, 1169, 1347, 2225
SseBI	AGGCCT	1 cut(s)	53
SspI	AATATT	2 cut(s)	2015, 2134
SspMI	CTAG	2 cut(s)	1413, 1922
SstI	GAGCTC	3 cut(s)	66, 546, 627
StuI	AGGCCT	1 cut(s)	53
StyD4I	CCNGG	7 cut(s)	240, 285, 291, 312, 321, 442, 463
StyI	CCWWGG	2 cut(s)	381, 1302
TaaI	ACNGT	5 cut(s)	637, 684, 897, 1150, 1756
TaiI	ACGT	5 cut(s)	189, 696, 1677, 1717, 2187
TasI	AATT	6 cut(s)	639, 881, 953, 1169, 1347, 2225
TatI	WGTACW	4 cut(s)	405, 411, 901, 1928
TauI	GCSGC	3 cut(s)	198, 213, 267
TfiI	GAWTC	4 cut(s)	800, 1613, 1699, 1793
Tru1I	TTAA	3 cut(s)	828, 2199, 2217
Tru9I	TTAA	3 cut(s)	828, 2199, 2217
TscAI	CASTG	5 cut(s)	41, 577, 900, 993, 1759
TseFI	GTSAC	5 cut(s)	572, 708, 891, 1675, 1833
TseI	GCWGC	3 cut(s)	532, 1987, 2245
Tsp45I	GTSAC	5 cut(s)	572, 708, 891, 1675, 1833
TspDTI	ATGAA	7 cut(s)	245, 1052, 1056, 1086, 1460, 1947, 1988
TspGWI	ACGGA	1 cut(s)	1218
TspRI	CASTG	5 cut(s)	41, 577, 900, 993, 1759
Vha464I	CTTAAG	1 cut(s)	2216
VneI	GTGCAC	1 cut(s)	1284
XagI	CCTNNNNNAGG	1 cut(s)	1260
XapI	RAATTY	2 cut(s)	1169, 2225
XceI	RCATGY	3 cut(s)	723, 1377, 1632
XcmI	CCANNNNNNNNNTGG	1 cut(s)	134
XhoI	CTCGAG	2 cut(s)	353, 628
XmiI	GTMKAC	1 cut(s)	1486
XmnI	GAANNNNTTC	1 cut(s)	702
XspI	CTAG	2 cut(s)	1413, 1922
ZrmI	AGTACT	1 cut(s)	413
Zsp2I	ATGCAT	1 cut(s)	1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.