Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0021001

Physical Location & Seq

Genomic Coordinates Forward (+)

30628021 .. 30630739

Gene Structure 2719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1240000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGACTTATCAAATTTCCAACCCAACAACAACAAGAAGCAGCAGCAGCAGCAAACCAACAACAACACTTCCACTTCCACTTCTAACAACAGCAACAACAACACAAGTCTCCAACACCACCATCTTCTTCCTCACCTTCAACAAAAATTCCAACACCACCACTCTTCCTCCTCTTCTTCTTCTTCTTCCCACTTTGTGGGCCCCTTTGATGGCATCAGATCTTCCTCAGGAGGAGGAGGGGGAGGAGGAGGACCCCCTTTCGTGGGCTCCATCTCAATTCAAGCTGGCCTCACCACCACTTCCCATTCTACCCCACCACCACCACCAACTTCTGCTCCTTCCTCCTCATCTTTCTCATCTTCCTCCTCCACCTCCTCCCCCTCCTCCACTTCCACCTCCGCCGCCCCTCCCCCTCACTTAGTCGACGCCTCCCTCGCCATCGCCACCAGATCCGATCCTCACCCACCCACCAGACCCGCCTCCCTCCTCGACTCCGCCAAAAATAACCAAACTCAACAGCAGTTGACCATTTCACCCGCCACCACTTCTCCTCCTTCAGCACCGGCAGCACCAGCGACCCAAGTGGCCAAACGATCCACCAAGGATCGACACACAAAAGTCGAAGGCAGAGGCCGCCGCATACGAATGCCGGCAACCTGCGCCGCCAGGGTCTTTCAGTTGACCAGAGAATTGGGCCACAAGTCCGACGGCGAGACCATTGAATGGCTCCTCCAGCAAGCCGAGCATGCCATCATCGCCACCACGGGAACCGGTACCATCCCCGCCAATTTCTCCACCTTGAACATCTCCCTGCGCAGCAGCGGATCAACGCTTTCTGCTCCGCCTTCCAAGTCCGCCCCTCACTCCTTTCCCGGCGCCTTGGCCCTCGCCCACCATCCTCACTACGACGAGGGTTTTGCCCATTCGGGTTTGTTGGGGTTTCATCAACAGCATCAACAACAGCAACATCAACAGCATCATCATCAGCCGCATCAGTCTCCTCTCATGACAGCAGATCAAATTGCAGAAGCGCTTCCAAGCGGCGGCGGAGACAGTGCTGGAGGCGGCGGTGGAGAGTCGACTGAGAATTATATGAGAAAACGCTTTAGAGAAGATTTGTTCAAGGATGACAATCAAGGGCAAGGCGAAAGCGGCAGCGGTGACGGAGGAGGGTCGCCGTCCAGGAATAAGGCATTTAAGGGCGCGAGTAGCGGCGGGTTACAACTGCCGAAACAGCAGCAGCAAGGAGCGGAAGTAGGATCTTCGGGGGTTTTGAGGCCTTCGAGCATCCTACCAGCCACTGCGATGTGGGCAGTGGCACCTGCCCCAACGAGCGGTGCTGGCAACACATTCTGGATGCTGCCAGTAACCGCTGGTCCCGGTGTACCCTCTATGGCAACCGCAACATTTGGGGCTGGTCCTTCAGAAGCTGCCCAAATGTGGACATTCCCGTCCTCAACCGCGAGTCACGGGAGCACATTGCAAGCGCCAATGCATTTCATGCCGAGGTTCAATCTTCCAAGCAGTCTTGAATTCCAGCAAGCAGCAGCCGGCGGCCGAGGGAGTCCCCTCCAATTGGGTTCCATGCTAATGCAGCAACCACCGTCGCAGCATCTCGGCCTCGGAGTTTCGGATTCGAATTTAGGCATGCTGGCGGCTCTTAATGCATACTCTAGAGGTGGTTTGAATATGAATTCCGATCAACACCAGCAGAATCATCATCATCCGTTGGATCATCATCATCAAGAACAACAACAACATCAGCCTCAAACTGCTGATAGTGGAGATGAAGCCCCAAACAATTTGGAAGTTGAATTCGTGATGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

610

Amino Acids

63.81

Weight (kDa)

7.11

Isoelectric Point (pI)

66.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	199 - 332	1.1e-33	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0021001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58100 AT1G58100
malus_domestica	MD08G1240000.v1.1 MD15G1431700.v1.1
prunus_persica	Prupe.1G576500_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1330
AasI	GACNNNNNNGTC	1 cut(s)	1450
Acc16I	TGCGCA	1 cut(s)	815
Acc36I	ACCTGC	2 cut(s)	665, 1330
Acc65I	GGTACC	1 cut(s)	773
AccB1I	GGYRCC	3 cut(s)	773, 875, 1318
AccB7I	CCANNNNNTGG	2 cut(s)	196, 723
AccBSI	CCGCTC	2 cut(s)	1250, 1335
AccI	GTMKAC	2 cut(s)	423, 1079
AccII	CGCG	2 cut(s)	1205, 1463
AclWI	GGATC	7 cut(s)	444, 449, 588, 612, 832, 1267, 1740
AcoI	YGGCCR	2 cut(s)	585, 1555
AcsI	RAATTY	6 cut(s)	13, 146, 1532, 1639, 1693, 1814
AcuI	CTGAAG	2 cut(s)	540, 1407
AcyI	GRCGYC	2 cut(s)	426, 876
AdeI	CACNNNGTG	1 cut(s)	196
AfaI	GTAC	2 cut(s)	775, 1386
AfeI	AGCGCT	1 cut(s)	1032
AfiI	CCNNNNNNNGG	9 cut(s)	196, 209, 262, 263, 723, 1043, 1334, 1440, 1576
AgeI	ACCGGT	1 cut(s)	770
AgsI	TTSAA	9 cut(s)	140, 281, 722, 802, 1123, 1513, 1532, 1687, 1814
AjnI	CCWGG	2 cut(s)	665, 1181
AluBI	AGCT	2 cut(s)	284, 1430
AluI	AGCT	2 cut(s)	284, 1430
Alw21I	GWGCWC	1 cut(s)	1478
Alw26I	GTCTC	4 cut(s)	113, 707, 1002, 1044
AlwI	GGATC	7 cut(s)	444, 449, 588, 612, 832, 1267, 1740
AlwNI	CAGNNNCTG	2 cut(s)	1301, 1430
Aor51HI	AGCGCT	1 cut(s)	1032
AoxI	GGCC	9 cut(s)	199, 286, 585, 631, 694, 882, 1277, 1555, 1618
ApaI	GGGCCC	1 cut(s)	203
ApoI	RAATTY	6 cut(s)	13, 146, 1532, 1639, 1693, 1814
ArsI	GACNNNNNNTTYG	2 cut(s)	899, 931
AsiGI	ACCGGT	1 cut(s)	770
Asp700I	GAANNNNTTC	1 cut(s)	1032
Asp718I	GGTACC	1 cut(s)	773
AspLEI	GCGC	6 cut(s)	662, 816, 878, 1033, 1205, 1489
AspS9I	GGNCC	7 cut(s)	199, 200, 251, 694, 883, 1376, 1418
AsuC2I	CCSGG	2 cut(s)	873, 1380
AsuHPI	GGTGA	5 cut(s)	125, 283, 452, 525, 1172
AsuII	TTCGAA	1 cut(s)	1637
AvaII	GGWCC	3 cut(s)	251, 1376, 1418
AxyI	CCTNAGG	1 cut(s)	226
BaeGI	GKGCMC	1 cut(s)	203
BalI	TGGCCA	1 cut(s)	587
BanI	GGYRCC	3 cut(s)	773, 875, 1318
BanII	GRGCYC	2 cut(s)	203, 269
Bbv12I	GWGCWC	1 cut(s)	1478
BccI	CCATC	7 cut(s)	129, 203, 278, 446, 758, 785, 903
BceAI	ACGGC	2 cut(s)	724, 1162
BcgI	CGANNNNNNTGC	2 cut(s)	899, 933
BciT130I	CCWGG	2 cut(s)	667, 1183
BcnI	CCSGG	2 cut(s)	873, 1380
BcoDI	GTCTC	4 cut(s)	113, 707, 1002, 1044
BfaI	CTAG	1 cut(s)	1674
BfoI	RGCGCY	3 cut(s)	879, 1034, 1490
BfuAI	ACCTGC	2 cut(s)	665, 1330
BglII	AGATCT	1 cut(s)	218
Bme1390I	CCNGG	4 cut(s)	667, 873, 1183, 1380
Bme18I	GGWCC	3 cut(s)	251, 1376, 1418
BmgT120I	GGNCC	7 cut(s)	199, 200, 251, 694, 883, 1376, 1418
BmrFI	CCNGG	4 cut(s)	667, 873, 1183, 1380
BmsI	GCATC	7 cut(s)	222, 961, 985, 1000, 1296, 1347, 1621
BpmI	CTGGAG	2 cut(s)	716, 1080
Bpu14I	TTCGAA	1 cut(s)	1637
BpuMI	CCSGG	2 cut(s)	873, 1380
BsaBI	GATNNNNATC	2 cut(s)	1131, 1737
BsaHI	GRCGYC	2 cut(s)	426, 876
BsaI	GGTCTC	1 cut(s)	707
BsaJI	CCNNGG	7 cut(s)	600, 666, 762, 879, 1505, 1558, 1621
BsaWI	WCCGGW	1 cut(s)	770
Bsc4I	CCNNNNNNNGG	9 cut(s)	196, 209, 262, 263, 723, 1043, 1334, 1440, 1576
Bse118I	RCCGGY	4 cut(s)	562, 649, 770, 1550
Bse1I	ACTGG	1 cut(s)	1364
Bse21I	CCTNAGG	1 cut(s)	226
Bse3DI	GCAATG	1 cut(s)	1478
Bse8I	GATNNNNATC	2 cut(s)	1131, 1737
BseBI	CCWGG	2 cut(s)	667, 1183
BseDI	CCNNGG	7 cut(s)	600, 666, 762, 879, 1505, 1558, 1621
BseGI	GGATG	6 cut(s)	777, 895, 1132, 1287, 1362, 1723
BseJI	GATNNNNATC	2 cut(s)	1131, 1737
BseLI	CCNNNNNNNGG	9 cut(s)	196, 209, 262, 263, 723, 1043, 1334, 1440, 1576
BseMI	GCAATG	1 cut(s)	1478
BseMII	CTCAG	2 cut(s)	240, 1074
BseNI	ACTGG	1 cut(s)	1364
BseSI	GKGCMC	1 cut(s)	203
BseX3I	CGGCCG	1 cut(s)	1555
Bsh1236I	CGCG	2 cut(s)	1205, 1463
Bsh1285I	CGRYCG	1 cut(s)	1558
BshFI	GGCC	9 cut(s)	201, 288, 587, 633, 696, 884, 1279, 1557, 1620
BshNI	GGYRCC	3 cut(s)	773, 875, 1318
BshTI	ACCGGT	1 cut(s)	770
BsiEI	CGRYCG	1 cut(s)	1558
BsiHKAI	GWGCWC	1 cut(s)	1478
BsiSI	CCGG	6 cut(s)	563, 650, 771, 873, 1380, 1551
BslFI	GGGAC	2 cut(s)	1362, 1551
BslI	CCNNNNNNNGG	9 cut(s)	196, 209, 262, 263, 723, 1043, 1334, 1440, 1576
BsmAI	GTCTC	4 cut(s)	113, 707, 1002, 1044
BsmFI	GGGAC	2 cut(s)	1362, 1551
BsmI	GAATGC	1 cut(s)	651
BsnI	GGCC	9 cut(s)	201, 288, 587, 633, 696, 884, 1279, 1557, 1620
Bso31I	GGTCTC	1 cut(s)	707
Bsp119I	TTCGAA	1 cut(s)	1637
Bsp120I	GGGCCC	1 cut(s)	199
Bsp1286I	GDGCHC	3 cut(s)	203, 269, 1478
BspANI	GGCC	9 cut(s)	201, 288, 587, 633, 696, 884, 1279, 1557, 1620
BspCNI	CTCAG	2 cut(s)	239, 1075
BspFNI	CGCG	2 cut(s)	1205, 1463
BspHI	TCATGA	1 cut(s)	1005
BspMI	ACCTGC	2 cut(s)	665, 1330
BspPI	GGATC	7 cut(s)	444, 449, 588, 612, 832, 1267, 1740
BspT104I	TTCGAA	1 cut(s)	1637
BspT107I	GGYRCC	3 cut(s)	773, 875, 1318
BspTNI	GGTCTC	1 cut(s)	707
BsrBI	CCGCTC	2 cut(s)	1250, 1335
BsrDI	GCAATG	1 cut(s)	1478
BsrFI	RCCGGY	4 cut(s)	562, 649, 770, 1550
BsrI	ACTGG	1 cut(s)	1364
BssAI	RCCGGY	4 cut(s)	562, 649, 770, 1550
BssECI	CCNNGG	7 cut(s)	600, 666, 762, 879, 1505, 1558, 1621
BssNI	GRCGYC	2 cut(s)	426, 876
BssT1I	CCWWGG	2 cut(s)	600, 879
Bst2UI	CCWGG	2 cut(s)	667, 1183
Bst4CI	ACNGT	2 cut(s)	1055, 1605
Bst6I	CTCTTC	2 cut(s)	169, 178
BstACI	GRCGYC	2 cut(s)	426, 876
BstAPI	GCANNNNNTGC	1 cut(s)	1501
BstBI	TTCGAA	1 cut(s)	1637
BstDEI	CTNAG	3 cut(s)	226, 418, 1083
BstDSI	CCRYGG	1 cut(s)	762
BstF5I	GGATG	6 cut(s)	777, 895, 1132, 1287, 1362, 1723
BstFNI	CGCG	2 cut(s)	1205, 1463
BstH2I	RGCGCY	3 cut(s)	879, 1034, 1490
BstHHI	GCGC	6 cut(s)	662, 816, 878, 1033, 1205, 1489
BstMAI	GTCTC	4 cut(s)	113, 707, 1002, 1044
BstMCI	CGRYCG	1 cut(s)	1558
BstNI	CCWGG	2 cut(s)	667, 1183
BstNSI	RCATGY	2 cut(s)	749, 1651
BstSCI	CCNGG	4 cut(s)	665, 871, 1181, 1378
BstSLI	GKGCMC	1 cut(s)	203
BstUI	CGCG	2 cut(s)	1205, 1463
BstX2I	RGATCY	3 cut(s)	218, 449, 1259
BstXI	CCANNNNNNTGG	1 cut(s)	691
BstYI	RGATCY	3 cut(s)	218, 449, 1259
BstZI	CGGCCG	1 cut(s)	1555
Bsu36I	CCTNAGG	1 cut(s)	226
BsuRI	GGCC	9 cut(s)	201, 288, 587, 633, 696, 884, 1279, 1557, 1620
BtgI	CCRYGG	1 cut(s)	762
BtgZI	GCGATG	3 cut(s)	424, 739, 1319
BtsCI	GGATG	6 cut(s)	777, 895, 1132, 1287, 1362, 1723
BtsI	GCAGTG	2 cut(s)	1299, 1320
BtsIMutI	CAGTG	3 cut(s)	1060, 1299, 1320
BveI	ACCTGC	2 cut(s)	665, 1330
CaiI	CAGNNNCTG	2 cut(s)	1301, 1430
CciI	TCATGA	1 cut(s)	1005
CfoI	GCGC	6 cut(s)	662, 816, 878, 1033, 1205, 1489
Cfr10I	RCCGGY	4 cut(s)	562, 649, 770, 1550
Cfr13I	GGNCC	7 cut(s)	199, 200, 251, 694, 883, 1376, 1418
CseI	GACGC	1 cut(s)	434
Csp6I	GTAC	2 cut(s)	774, 1385
CspAI	ACCGGT	1 cut(s)	770
CviAII	CATG	5 cut(s)	746, 1006, 1501, 1585, 1648
CviQI	GTAC	2 cut(s)	774, 1385
DdeI	CTNAG	3 cut(s)	226, 418, 1083
DinI	GGCGCC	1 cut(s)	877
DraIII	CACNNNGTG	1 cut(s)	196
DrdI	GACNNNNNNGTC	1 cut(s)	1450
DseDI	GACNNNNNNGTC	1 cut(s)	1450
EaeI	YGGCCR	2 cut(s)	585, 1555
EagI	CGGCCG	1 cut(s)	1555
Eam1104I	CTCTTC	2 cut(s)	169, 178
EarI	CTCTTC	2 cut(s)	169, 178
EciI	GGCGGA	5 cut(s)	388, 484, 831, 844, 1062
EclXI	CGGCCG	1 cut(s)	1555
Eco130I	CCWWGG	2 cut(s)	600, 879
Eco147I	AGGCCT	1 cut(s)	1279
Eco24I	GRGCYC	2 cut(s)	203, 269
Eco31I	GGTCTC	1 cut(s)	707
Eco47I	GGWCC	3 cut(s)	251, 1376, 1418
Eco47III	AGCGCT	1 cut(s)	1032
Eco52I	CGGCCG	1 cut(s)	1555
Eco57I	CTGAAG	2 cut(s)	540, 1407
Eco81I	CCTNAGG	1 cut(s)	226
EcoO109I	RGGNCCY	2 cut(s)	200, 251
EcoRI	GAATTC	3 cut(s)	1532, 1693, 1814
EcoRII	CCWGG	2 cut(s)	665, 1181
EcoT14I	CCWWGG	2 cut(s)	600, 879
EcoT22I	ATGCAT	2 cut(s)	1497, 1669
EcoT38I	GRGCYC	2 cut(s)	203, 269
EgeI	GGCGCC	1 cut(s)	877
EheI	GGCGCC	1 cut(s)	877
ErhI	CCWWGG	2 cut(s)	600, 879
FaeI	CATG	5 cut(s)	749, 1009, 1504, 1588, 1651
FaqI	GGGAC	2 cut(s)	1362, 1551
FatI	CATG	5 cut(s)	745, 1005, 1500, 1584, 1647
FauI	CCCGC	4 cut(s)	484, 544, 790, 1208
FblI	GTMKAC	2 cut(s)	423, 1079
FokI	GGATG	6 cut(s)	764, 882, 1139, 1274, 1369, 1710
FriOI	GRGCYC	2 cut(s)	203, 269
FspBI	CTAG	1 cut(s)	1674
FspI	TGCGCA	1 cut(s)	815
GlaI	GCGC	6 cut(s)	661, 815, 877, 1032, 1204, 1488
GsuI	CTGGAG	2 cut(s)	716, 1080
HaeII	RGCGCY	3 cut(s)	879, 1034, 1490
HaeIII	GGCC	9 cut(s)	201, 288, 587, 633, 696, 884, 1279, 1557, 1620
HapII	CCGG	6 cut(s)	563, 650, 771, 873, 1380, 1551
HgaI	GACGC	1 cut(s)	434
HhaI	GCGC	6 cut(s)	662, 816, 878, 1033, 1205, 1489
Hin1I	GRCGYC	2 cut(s)	426, 876
Hin1II	CATG	5 cut(s)	749, 1009, 1504, 1588, 1651
Hin6I	GCGC	6 cut(s)	660, 814, 876, 1031, 1203, 1487
HinP1I	GCGC	6 cut(s)	660, 814, 876, 1031, 1203, 1487
HincII	GTYRAC	4 cut(s)	424, 525, 681, 1080
HindII	GTYRAC	4 cut(s)	424, 525, 681, 1080
HinfI	GANTC	6 cut(s)	491, 1076, 1465, 1564, 1634, 1714
HpaII	CCGG	6 cut(s)	563, 650, 771, 873, 1380, 1551
HphI	GGTGA	5 cut(s)	125, 283, 452, 525, 1172
Hpy166II	GTNNAC	6 cut(s)	424, 525, 681, 1080, 1385, 1443
Hpy188I	TCNGA	7 cut(s)	218, 454, 706, 1426, 1625, 1633, 1699
Hpy188III	TCNNGA	7 cut(s)	228, 1006, 1354, 1529, 1674, 1745, 1819
Hpy8I	GTNNAC	6 cut(s)	424, 525, 681, 1080, 1385, 1443
Hpy99I	CGWCG	4 cut(s)	428, 710, 911, 1609
HpyAV	CCTTC	7 cut(s)	146, 348, 564, 617, 855, 1290, 1431
HpyCH4III	ACNGT	2 cut(s)	1055, 1605
HpyCH4V	TGCA	5 cut(s)	1025, 1483, 1495, 1594, 1667
HpyF3I	CTNAG	3 cut(s)	226, 418, 1083
Hsp92I	GRCGYC	2 cut(s)	426, 876
Hsp92II	CATG	5 cut(s)	749, 1009, 1504, 1588, 1651
HspAI	GCGC	6 cut(s)	660, 814, 876, 1031, 1203, 1487
KasI	GGCGCC	1 cut(s)	875
KpnI	GGTACC	1 cut(s)	777
KroI	GCCGGC	2 cut(s)	649, 1550
KroNI	GCCGGC	2 cut(s)	651, 1552
LmnI	GCTCC	6 cut(s)	272, 340, 732, 844, 1247, 1473
LweI	GCATC	7 cut(s)	222, 961, 985, 1000, 1296, 1347, 1621
MaeI	CTAG	1 cut(s)	1674
MaeIII	GTNAC	4 cut(s)	1160, 1218, 1366, 1466
MbiI	CCGCTC	2 cut(s)	1250, 1335
MfeI	CAATTG	1 cut(s)	1574
MflI	RGATCY	3 cut(s)	218, 449, 1259
MhlI	GDGCHC	3 cut(s)	203, 269, 1478
MlsI	TGGCCA	1 cut(s)	587
MluNI	TGGCCA	1 cut(s)	587
Mly113I	GGCGCC	1 cut(s)	876
MlyI	GAGTC	4 cut(s)	485, 1085, 1474, 1573
MmeI	TCCRAC	5 cut(s)	43, 136, 175, 729, 1710
Mox20I	TGGCCA	1 cut(s)	587
Mph1103I	ATGCAT	2 cut(s)	1497, 1669
MroNI	GCCGGC	2 cut(s)	649, 1550
MroXI	GAANNNNTTC	1 cut(s)	1032
MscI	TGGCCA	1 cut(s)	587
MseI	TTAA	2 cut(s)	1197, 1662
MslI	CAYNNNNRTG	3 cut(s)	644, 1304, 1589
Msp20I	TGGCCA	1 cut(s)	587
MspA1I	CMGCKG	3 cut(s)	822, 1158, 1373
MspI	CCGG	6 cut(s)	563, 650, 771, 873, 1380, 1551
MspR9I	CCNGG	4 cut(s)	667, 873, 1183, 1380
MunI	CAATTG	1 cut(s)	1574
Mva1269I	GAATGC	1 cut(s)	651
MvaI	CCWGG	2 cut(s)	667, 1183
MvnI	CGCG	2 cut(s)	1205, 1463
NaeI	GCCGGC	2 cut(s)	651, 1552
NarI	GGCGCC	1 cut(s)	876
NciI	CCSGG	2 cut(s)	873, 1380
NgoMIV	GCCGGC	2 cut(s)	649, 1550
NlaIII	CATG	5 cut(s)	749, 1009, 1504, 1588, 1651
NmeAIII	GCCGAG	4 cut(s)	766, 1530, 1583, 1596
NmuCI	GTSAC	2 cut(s)	1160, 1466
NsbI	TGCGCA	1 cut(s)	815
NsiI	ATGCAT	2 cut(s)	1497, 1669
NspI	RCATGY	2 cut(s)	749, 1651
NspV	TTCGAA	1 cut(s)	1637
PaeI	GCATGC	2 cut(s)	749, 1651
PagI	TCATGA	1 cut(s)	1005
PaqCI	CACCTGC	1 cut(s)	1330
PceI	AGGCCT	1 cut(s)	1279
PctI	GAATGC	1 cut(s)	651
PdiI	GCCGGC	2 cut(s)	651, 1552
PdmI	GAANNNNTTC	1 cut(s)	1032
PfeI	GAWTC	2 cut(s)	1634, 1714
PflMI	CCANNNNNTGG	2 cut(s)	196, 723
PfoI	TCCNGGA	1 cut(s)	1181
PinAI	ACCGGT	1 cut(s)	770
PleI	GAGTC	4 cut(s)	485, 1084, 1473, 1572
PluTI	GGCGCC	1 cut(s)	879
PpsI	GAGTC	4 cut(s)	485, 1084, 1473, 1572
PpuMI	RGGWCCY	1 cut(s)	251
Psp5II	RGGWCCY	1 cut(s)	251
Psp6I	CCWGG	2 cut(s)	665, 1181
PspGI	CCWGG	2 cut(s)	665, 1181
PspOMI	GGGCCC	1 cut(s)	199
PspPI	GGNCC	7 cut(s)	199, 200, 251, 694, 883, 1376, 1418
PspPPI	RGGWCCY	1 cut(s)	251
PstNI	CAGNNNCTG	2 cut(s)	1301, 1430
PsuI	RGATCY	3 cut(s)	218, 449, 1259
RsaI	GTAC	2 cut(s)	775, 1386
RsaNI	GTAC	2 cut(s)	774, 1385
RseI	CAYNNNNRTG	3 cut(s)	644, 1304, 1589
SalI	GTCGAC	2 cut(s)	422, 1078
SaqAI	TTAA	2 cut(s)	1197, 1662
Sau96I	GGNCC	7 cut(s)	199, 200, 251, 694, 883, 1376, 1418
SchI	GAGTC	4 cut(s)	485, 1085, 1474, 1573
ScrFI	CCNGG	4 cut(s)	667, 873, 1183, 1380
SduI	GDGCHC	3 cut(s)	203, 269, 1478
SfaNI	GCATC	7 cut(s)	222, 961, 985, 1000, 1296, 1347, 1621
SfoI	GGCGCC	1 cut(s)	877
SfuI	TTCGAA	1 cut(s)	1637
SinI	GGWCC	3 cut(s)	251, 1376, 1418
SmiMI	CAYNNNNRTG	3 cut(s)	644, 1304, 1589
SphI	GCATGC	2 cut(s)	749, 1651
SseBI	AGGCCT	1 cut(s)	1279
SspDI	GGCGCC	1 cut(s)	875
SspMI	CTAG	1 cut(s)	1674
StuI	AGGCCT	1 cut(s)	1279
StyD4I	CCNGG	4 cut(s)	665, 871, 1181, 1378
StyI	CCWWGG	2 cut(s)	600, 879
TaaI	ACNGT	2 cut(s)	1055, 1605
TaqI	TCGA	7 cut(s)	423, 489, 607, 621, 1079, 1283, 1637
TfiI	GAWTC	2 cut(s)	1634, 1714
Tru1I	TTAA	2 cut(s)	1197, 1662
Tru9I	TTAA	2 cut(s)	1197, 1662
TscAI	CASTG	3 cut(s)	1060, 1306, 1320
TseFI	GTSAC	2 cut(s)	1160, 1466
Tsp45I	GTSAC	2 cut(s)	1160, 1466
TspDTI	ATGAA	4 cut(s)	932, 1489, 1706, 1803
TspGWI	ACGGA	2 cut(s)	1179, 1716
TspRI	CASTG	3 cut(s)	1060, 1306, 1320
Van91I	CCANNNNNTGG	2 cut(s)	196, 723
VpaK11BI	GGWCC	3 cut(s)	251, 1376, 1418
XapI	RAATTY	6 cut(s)	13, 146, 1532, 1639, 1693, 1814
XbaI	TCTAGA	1 cut(s)	1673
XceI	RCATGY	2 cut(s)	749, 1651
XmiI	GTMKAC	2 cut(s)	423, 1079
XmnI	GAANNNNTTC	1 cut(s)	1032
XspI	CTAG	1 cut(s)	1674
Zsp2I	ATGCAT	2 cut(s)	1497, 1669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.