Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0021001

Physical Location & Seq

Genomic Coordinates Forward (+)

53149356 .. 53150897

Gene Structure 1542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1431700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGGCTCCATCTCAATTCAAGCTGGCCTCACCACCACTTCCCATTCTACCCCACCACCACCAACAACTTCTGCTCCTTCCTCCTCATCTTTCTCCTCTTCCTCCTCCACCTCCTCCCCCTCCTCCACTTCCACCTCCACCGCCCCTCCCCAACTAGTCGACGCCTCCCTCGCCATCGCCACCAGATCCGATCCCCACCCACCCACCAGACCCGGCTCCCTTCTCGACTCCGCCAAAAATAACCAAATTCAACAGCAACTGACCATTTCACCCGCCACCACTCCGCCTCCAGCAGCAGCAGCAACAACGACTCCAGTGGCCAAACGATCCACCAAGGACCGACACACAAAAGTTGAAGGCAGAGGCCGACGCATACGAATGCCGGCAACCTGCGCGGCCAGAGTCTTCCAGTTGACCAGAGAACTGGGACATAAGTCTGACGGCGAGACCATCGAGTGGCTCCTCCAGCAAGCTGAGCCTTCCATCATCGCCACTACCGGAACAGGCACCATCCCAGCCAATTTCTCAACCTTGAACATATCCCTGCGCAGCAGTGGGTCAAGTCTCTCTGCTCCGCCTTCCAAGTCCGCCCCTCACTCCTTTCACGGCGCCTTGGCTCTCACCCACCGCCCTCACTACGACGAGGGTTTTGCCCATTCGGGTCTGTTGGGGTTTCATCAACAACCTCAACAGCAGCAGCAGCAGCATCCACAGCATCATCATCAGCCGCATCAGTCTCCTCTCATGACAGCAGATGAAATTGCAGAAGCGCTTCCAAGTGGCGGCGGAGACAGTGGCGGAGGCGGCGGTGGAGAATCGACTGAGAATTATATGAGAAAACGCTTTAGAGAAGATTTGTTCAAGGATGACAATCAAGAGCGAGGAGAAAGCGGCAGCGGTGGTGGAGTAGGATCGCCGTCCAGGAACAAGGCATTTAAGGGTGGGAGTAGTTGTGGGTTACAATTGCCAAAACAGCAGCAGCAGGGAGAGGAGCTAGGATCTTATTCTTCCGGGGTTTTGAGGCCTTCAAACATCTTACCCGCCACTGCGATGTGGGCAGTGGCACCAGCCCCAACAAGCGGTGCTGGCAGCACATTCTGGATGCTGCCAGTAACTGCTGGTTCGGCTGTACCTTCTATGGCCACCGGAACATCTGGGGCAGGTCCTTCAGAAGCAACCCAAATGTGGACATTCCCGTCCGCAACCGCCAGTCACGTAAGCACATTGCAAGCGCCATTACATTTCATGCCGAGGTTCAATCTTCCGGGCAGTCTTGAATTCCAGCAAGCCGGCAGCCGAGGGAGTCCCCTCCAGTTGGGCTCCATGCTAATGCAGCAACAACCGTCTCAGCATCTCGGCCTCGGAGTTTCCGAGTCGAATTTAGGCATGCTGGCAGCGCTTAATGCTTACTCTAGAGGAGGTTTAAATATGAATTCCGATCACCAGCAGAATCATCAGCATCCGTTGGATCATCATCAACAACAACACCACCAGCATCAAACTACGGATAGTGGAGATGAAGGCCCAAACAGTTCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

514

Amino Acids

53.75

Weight (kDa)

6.97

Isoelectric Point (pI)

67.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	110 - 242	2.6e-33	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0021001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58100 AT1G58100
malus_domestica	MD08G1240000.v1.1 MD15G1431700.v1.1
prunus_persica	Prupe.1G576500_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1195
Acc16I	TGCGCA	1 cut(s)	548
Acc36I	ACCTGC	2 cut(s)	398, 1151
AccB1I	GGYRCC	3 cut(s)	506, 608, 1063
AccB7I	CCANNNNNTGG	1 cut(s)	456
AccI	GTMKAC	1 cut(s)	159
AccII	CGCG	1 cut(s)	395
AclWI	GGATC	6 cut(s)	180, 185, 321, 919, 1006, 1476
AcoI	YGGCCR	3 cut(s)	318, 396, 1140
AcsI	RAATTY	4 cut(s)	246, 1277, 1378, 1432
AcuI	CTGAAG	1 cut(s)	1152
AcyI	GRCGYC	2 cut(s)	162, 609
AfaI	GTAC	1 cut(s)	1131
AfeI	AGCGCT	2 cut(s)	771, 1398
AfiI	CCNNNNNNNGG	5 cut(s)	456, 782, 1079, 1185, 1315
AgsI	TTSAA	8 cut(s)	20, 251, 356, 535, 862, 1029, 1258, 1277
AhlI	ACTAGT	1 cut(s)	154
AjnI	CCWGG	1 cut(s)	920
AluBI	AGCT	3 cut(s)	23, 473, 994
AluI	AGCT	3 cut(s)	23, 473, 994
Alw26I	GTCTC	5 cut(s)	440, 569, 741, 783, 1350
AlwI	GGATC	6 cut(s)	180, 185, 321, 919, 1006, 1476
AlwNI	CAGNNNCTG	2 cut(s)	259, 1115
Aor51HI	AGCGCT	2 cut(s)	771, 1398
AoxI	GGCC	8 cut(s)	25, 318, 364, 396, 1022, 1140, 1357, 1522
ApoI	RAATTY	4 cut(s)	246, 1277, 1378, 1432
ArsI	GACNNNNNNTTYG	2 cut(s)	632, 664
Asp700I	GAANNNNTTC	1 cut(s)	771
AspLEI	GCGC	6 cut(s)	395, 549, 611, 772, 1234, 1399
AspS9I	GGNCC	3 cut(s)	337, 1163, 1523
AsuC2I	CCSGG	3 cut(s)	213, 1012, 1266
AsuHPI	GGTGA	4 cut(s)	22, 261, 613, 1433
AvaII	GGWCC	2 cut(s)	337, 1163
BalI	TGGCCA	2 cut(s)	320, 1142
BanI	GGYRCC	3 cut(s)	506, 608, 1063
BanII	GRGCYC	2 cut(s)	8, 1322
BbsI	GAAGAC	1 cut(s)	397
BccI	CCATC	5 cut(s)	17, 182, 458, 491, 518
BceAI	ACGGC	3 cut(s)	457, 622, 901
BcgI	CGANNNNNNTGC	2 cut(s)	632, 666
BciT130I	CCWGG	1 cut(s)	922
BcnI	CCSGG	3 cut(s)	213, 1012, 1266
BcoDI	GTCTC	5 cut(s)	440, 569, 741, 783, 1350
BcuI	ACTAGT	1 cut(s)	154
BfaI	CTAG	3 cut(s)	155, 995, 1413
BfoI	RGCGCY	4 cut(s)	612, 773, 1235, 1400
BfuAI	ACCTGC	2 cut(s)	398, 1151
BlpI	GCTNAGC	1 cut(s)	474
Bme1390I	CCNGG	4 cut(s)	213, 922, 1012, 1266
Bme18I	GGWCC	2 cut(s)	337, 1163
BmgT120I	GGNCC	3 cut(s)	337, 1163, 1523
BmiI	GGNNCC	7 cut(s)	7, 217, 461, 508, 610, 1065, 1321
BmrFI	CCNGG	4 cut(s)	213, 922, 1012, 1266
BmrI	ACTGGG	1 cut(s)	434
BmsI	GCATC	7 cut(s)	715, 724, 739, 1092, 1360, 1468, 1504
BmuI	ACTGGG	1 cut(s)	434
BoxI	GACNNNNGTC	1 cut(s)	433
BpiI	GAAGAC	1 cut(s)	397
BpmI	CTGGAG	4 cut(s)	273, 297, 449, 1295
Bpu1102I	GCTNAGC	1 cut(s)	474
BpuMI	CCSGG	3 cut(s)	213, 1012, 1266
BsaAI	YACGTR	1 cut(s)	1216
BsaBI	GATNNNNATC	2 cut(s)	870, 1473
BsaHI	GRCGYC	2 cut(s)	162, 609
BsaI	GGTCTC	1 cut(s)	440
BsaJI	CCNNGG	6 cut(s)	333, 612, 1011, 1250, 1297, 1360
BsaWI	WCCGGW	2 cut(s)	497, 1145
Bsc4I	CCNNNNNNNGG	5 cut(s)	456, 782, 1079, 1185, 1315
Bse118I	RCCGGY	2 cut(s)	382, 1289
Bse1I	ACTGG	6 cut(s)	314, 409, 429, 1109, 1209, 1312
Bse3DI	GCAATG	1 cut(s)	1223
Bse8I	GATNNNNATC	2 cut(s)	870, 1473
BseBI	CCWGG	1 cut(s)	922
BseDI	CCNNGG	6 cut(s)	333, 612, 1011, 1250, 1297, 1360
BseGI	GGATG	5 cut(s)	510, 706, 871, 1107, 1459
BseJI	GATNNNNATC	2 cut(s)	870, 1473
BseLI	CCNNNNNNNGG	5 cut(s)	456, 782, 1079, 1185, 1315
BseMI	GCAATG	1 cut(s)	1223
BseMII	CTCAG	3 cut(s)	465, 813, 1361
BseNI	ACTGG	6 cut(s)	314, 409, 429, 1109, 1209, 1312
BseYI	CCCAGC	1 cut(s)	514
Bsh1236I	CGCG	1 cut(s)	395
BshFI	GGCC	8 cut(s)	27, 320, 366, 398, 1024, 1142, 1359, 1524
BshNI	GGYRCC	3 cut(s)	506, 608, 1063
BsiSI	CCGG	7 cut(s)	213, 383, 498, 1011, 1146, 1265, 1290
BslFI	GGGAC	2 cut(s)	441, 1290
BslI	CCNNNNNNNGG	5 cut(s)	456, 782, 1079, 1185, 1315
BsmAI	GTCTC	5 cut(s)	440, 569, 741, 783, 1350
BsmBI	CGTCTC	1 cut(s)	1350
BsmFI	GGGAC	2 cut(s)	441, 1290
BsmI	GAATGC	1 cut(s)	384
BsnI	GGCC	8 cut(s)	27, 320, 366, 398, 1024, 1142, 1359, 1524
Bso31I	GGTCTC	1 cut(s)	440
Bsp1286I	GDGCHC	2 cut(s)	8, 1322
Bsp143I	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
Bsp1720I	GCTNAGC	1 cut(s)	474
BspANI	GGCC	8 cut(s)	27, 320, 366, 398, 1024, 1142, 1359, 1524
BspCNI	CTCAG	3 cut(s)	466, 814, 1360
BspFNI	CGCG	1 cut(s)	395
BspHI	TCATGA	1 cut(s)	744
BspLI	GGNNCC	7 cut(s)	7, 217, 461, 508, 610, 1065, 1321
BspMI	ACCTGC	2 cut(s)	398, 1151
BspPI	GGATC	6 cut(s)	180, 185, 321, 919, 1006, 1476
BspT107I	GGYRCC	3 cut(s)	506, 608, 1063
BspTNI	GGTCTC	1 cut(s)	440
BsrDI	GCAATG	1 cut(s)	1223
BsrFI	RCCGGY	2 cut(s)	382, 1289
BsrI	ACTGG	6 cut(s)	314, 409, 429, 1109, 1209, 1312
BssAI	RCCGGY	2 cut(s)	382, 1289
BssECI	CCNNGG	6 cut(s)	333, 612, 1011, 1250, 1297, 1360
BssMI	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
BssNI	GRCGYC	2 cut(s)	162, 609
BssT1I	CCWWGG	2 cut(s)	333, 612
Bst2UI	CCWGG	1 cut(s)	922
Bst4CI	ACNGT	3 cut(s)	794, 1344, 1532
Bst6I	CTCTTC	1 cut(s)	103
BstACI	GRCGYC	2 cut(s)	162, 609
BstBAI	YACGTR	1 cut(s)	1216
BstC8I	GCNNGC	9 cut(s)	25, 384, 471, 1087, 1230, 1287, 1291, 1388, 1392
BstDEI	CTNAG	3 cut(s)	474, 822, 1347
BstF5I	GGATG	5 cut(s)	510, 706, 871, 1107, 1459
BstFNI	CGCG	1 cut(s)	395
BstH2I	RGCGCY	4 cut(s)	612, 773, 1235, 1400
BstHHI	GCGC	6 cut(s)	395, 549, 611, 772, 1234, 1399
BstKTI	GATC	7 cut(s)	188, 193, 329, 914, 1001, 1441, 1471
BstMAI	GTCTC	5 cut(s)	440, 569, 741, 783, 1350
BstMBI	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
BstNI	CCWGG	1 cut(s)	922
BstNSI	RCATGY	1 cut(s)	1390
BstPAI	GACNNNNGTC	1 cut(s)	433
BstSCI	CCNGG	4 cut(s)	211, 920, 1010, 1264
BstUI	CGCG	1 cut(s)	395
BstV2I	GAAGAC	1 cut(s)	397
BstX2I	RGATCY	2 cut(s)	185, 998
BstXI	CCANNNNNNTGG	1 cut(s)	424
BstYI	RGATCY	2 cut(s)	185, 998
BsuRI	GGCC	8 cut(s)	27, 320, 366, 398, 1024, 1142, 1359, 1524
BtgZI	GCGATG	3 cut(s)	160, 472, 1064
BtsCI	GGATG	5 cut(s)	510, 706, 871, 1107, 1459
BtsI	GCAGTG	3 cut(s)	559, 1044, 1065
BtsIMutI	CAGTG	5 cut(s)	321, 559, 799, 1044, 1065
BveI	ACCTGC	2 cut(s)	398, 1151
Cac8I	GCNNGC	9 cut(s)	25, 384, 471, 1087, 1230, 1287, 1291, 1388, 1392
CaiI	CAGNNNCTG	2 cut(s)	259, 1115
CciI	TCATGA	1 cut(s)	744
CfoI	GCGC	6 cut(s)	395, 549, 611, 772, 1234, 1399
Cfr10I	RCCGGY	2 cut(s)	382, 1289
Cfr13I	GGNCC	3 cut(s)	337, 1163, 1523
CseI	GACGC	2 cut(s)	170, 378
Csp6I	GTAC	1 cut(s)	1130
CviAII	CATG	4 cut(s)	745, 1246, 1324, 1387
CviQI	GTAC	1 cut(s)	1130
DdeI	CTNAG	3 cut(s)	474, 822, 1347
DinI	GGCGCC	1 cut(s)	610
DpnI	GATC	7 cut(s)	187, 192, 328, 913, 1000, 1440, 1470
DpnII	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
DraI	TTTAAA	1 cut(s)	1425
DrdI	GACNNNNNNGTC	1 cut(s)	1195
DseDI	GACNNNNNNGTC	1 cut(s)	1195
EaeI	YGGCCR	3 cut(s)	318, 396, 1140
Eam1104I	CTCTTC	1 cut(s)	103
EarI	CTCTTC	1 cut(s)	103
EciI	GGCGGA	6 cut(s)	220, 273, 564, 577, 801, 813
Eco130I	CCWWGG	2 cut(s)	333, 612
Eco147I	AGGCCT	1 cut(s)	1024
Eco24I	GRGCYC	2 cut(s)	8, 1322
Eco31I	GGTCTC	1 cut(s)	440
Eco47I	GGWCC	2 cut(s)	337, 1163
Eco47III	AGCGCT	2 cut(s)	771, 1398
Eco57I	CTGAAG	1 cut(s)	1152
EcoO109I	RGGNCCY	1 cut(s)	1163
EcoRI	GAATTC	2 cut(s)	1277, 1432
EcoRII	CCWGG	1 cut(s)	920
EcoT14I	CCWWGG	2 cut(s)	333, 612
EcoT38I	GRGCYC	2 cut(s)	8, 1322
EgeI	GGCGCC	1 cut(s)	610
EheI	GGCGCC	1 cut(s)	610
ErhI	CCWWGG	2 cut(s)	333, 612
Esp3I	CGTCTC	1 cut(s)	1350
FaeI	CATG	4 cut(s)	748, 1249, 1327, 1390
FaqI	GGGAC	2 cut(s)	441, 1290
FatI	CATG	4 cut(s)	744, 1245, 1323, 1386
FauI	CCCGC	2 cut(s)	280, 1048
FblI	GTMKAC	1 cut(s)	159
FokI	GGATG	5 cut(s)	497, 693, 878, 1114, 1446
FriOI	GRGCYC	2 cut(s)	8, 1322
FspBI	CTAG	3 cut(s)	155, 995, 1413
FspI	TGCGCA	1 cut(s)	548
GlaI	GCGC	6 cut(s)	394, 548, 610, 771, 1233, 1398
GsaI	CCCAGC	1 cut(s)	518
GsuI	CTGGAG	4 cut(s)	273, 297, 449, 1295
HaeII	RGCGCY	4 cut(s)	612, 773, 1235, 1400
HaeIII	GGCC	8 cut(s)	27, 320, 366, 398, 1024, 1142, 1359, 1524
HapII	CCGG	7 cut(s)	213, 383, 498, 1011, 1146, 1265, 1290
HgaI	GACGC	2 cut(s)	170, 378
HhaI	GCGC	6 cut(s)	395, 549, 611, 772, 1234, 1399
Hin1I	GRCGYC	2 cut(s)	162, 609
Hin1II	CATG	4 cut(s)	748, 1249, 1327, 1390
Hin6I	GCGC	6 cut(s)	393, 547, 609, 770, 1232, 1397
HinP1I	GCGC	6 cut(s)	393, 547, 609, 770, 1232, 1397
HincII	GTYRAC	2 cut(s)	160, 414
HindII	GTYRAC	2 cut(s)	160, 414
HinfI	GANTC	7 cut(s)	227, 310, 402, 815, 1303, 1373, 1450
HpaII	CCGG	7 cut(s)	213, 383, 498, 1011, 1146, 1265, 1290
HphI	GGTGA	4 cut(s)	22, 261, 613, 1433
Hpy166II	GTNNAC	3 cut(s)	160, 414, 1188
Hpy188I	TCNGA	6 cut(s)	190, 439, 1171, 1364, 1372, 1438
Hpy188III	TCNNGA	6 cut(s)	224, 745, 875, 1099, 1274, 1413
Hpy8I	GTNNAC	3 cut(s)	160, 414, 1188
Hpy99I	CGWCG	3 cut(s)	164, 372, 644
HpyAV	CCTTC	9 cut(s)	87, 230, 350, 489, 588, 1035, 1143, 1176, 1514
HpyCH4III	ACNGT	3 cut(s)	794, 1344, 1532
HpyCH4IV	ACGT	1 cut(s)	1215
HpyCH4V	TGCA	3 cut(s)	764, 1228, 1333
HpyF3I	CTNAG	3 cut(s)	474, 822, 1347
HpySE526I	ACGT	1 cut(s)	1215
Hsp92I	GRCGYC	2 cut(s)	162, 609
Hsp92II	CATG	4 cut(s)	748, 1249, 1327, 1390
HspAI	GCGC	6 cut(s)	393, 547, 609, 770, 1232, 1397
KasI	GGCGCC	1 cut(s)	608
KroI	GCCGGC	2 cut(s)	382, 1289
KroNI	GCCGGC	2 cut(s)	384, 1291
Kzo9I	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
LmnI	GCTCC	7 cut(s)	11, 79, 221, 465, 577, 991, 1325
LweI	GCATC	7 cut(s)	715, 724, 739, 1092, 1360, 1468, 1504
MaeI	CTAG	3 cut(s)	155, 995, 1413
MaeII	ACGT	1 cut(s)	1215
MaeIII	GTNAC	3 cut(s)	957, 1111, 1211
MalI	GATC	7 cut(s)	187, 192, 328, 913, 1000, 1440, 1470
MboI	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
MboII	GAAGA	5 cut(s)	90, 397, 863, 999, 1253
MfeI	CAATTG	1 cut(s)	962
MflI	RGATCY	2 cut(s)	185, 998
MhlI	GDGCHC	2 cut(s)	8, 1322
MlsI	TGGCCA	2 cut(s)	320, 1142
MluCI	AATT	9 cut(s)	15, 246, 520, 759, 826, 962, 1277, 1378, 1432
MluNI	TGGCCA	2 cut(s)	320, 1142
Mly113I	GGCGCC	1 cut(s)	609
MlyI	GAGTC	5 cut(s)	221, 304, 411, 1312, 1382
MmeI	TCCRAC	1 cut(s)	1446
Mox20I	TGGCCA	2 cut(s)	320, 1142
MroNI	GCCGGC	2 cut(s)	382, 1289
MroXI	GAANNNNTTC	1 cut(s)	771
MscI	TGGCCA	2 cut(s)	320, 1142
MseI	TTAA	3 cut(s)	936, 1401, 1424
MslI	CAYNNNNRTG	3 cut(s)	377, 1049, 1328
Msp20I	TGGCCA	2 cut(s)	320, 1142
MspA1I	CMGCKG	1 cut(s)	897
MspI	CCGG	7 cut(s)	213, 383, 498, 1011, 1146, 1265, 1290
MspR9I	CCNGG	4 cut(s)	213, 922, 1012, 1266
MunI	CAATTG	1 cut(s)	962
Mva1269I	GAATGC	1 cut(s)	384
MvaI	CCWGG	1 cut(s)	922
MvnI	CGCG	1 cut(s)	395
NaeI	GCCGGC	2 cut(s)	384, 1291
NarI	GGCGCC	1 cut(s)	609
NciI	CCSGG	3 cut(s)	213, 1012, 1266
NdeII	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
NgoMIV	GCCGGC	2 cut(s)	382, 1289
NlaIII	CATG	4 cut(s)	748, 1249, 1327, 1390
NlaIV	GGNNCC	7 cut(s)	7, 217, 461, 508, 610, 1065, 1321
NmeAIII	GCCGAG	3 cut(s)	1275, 1322, 1335
NmuCI	GTSAC	1 cut(s)	1211
NsbI	TGCGCA	1 cut(s)	548
NspI	RCATGY	1 cut(s)	1390
PaeI	GCATGC	1 cut(s)	1390
PagI	TCATGA	1 cut(s)	744
PceI	AGGCCT	1 cut(s)	1024
PcsI	WCGNNNNNNNCGW	1 cut(s)	1368
PctI	GAATGC	1 cut(s)	384
PdiI	GCCGGC	2 cut(s)	384, 1291
PdmI	GAANNNNTTC	1 cut(s)	771
PfeI	GAWTC	2 cut(s)	815, 1450
PflMI	CCANNNNNTGG	1 cut(s)	456
PfoI	TCCNGGA	1 cut(s)	920
PleI	GAGTC	5 cut(s)	221, 304, 410, 1311, 1381
PluTI	GGCGCC	1 cut(s)	612
PpsI	GAGTC	5 cut(s)	221, 304, 410, 1311, 1381
Ppu21I	YACGTR	1 cut(s)	1216
PpuMI	RGGWCCY	1 cut(s)	1163
PshAI	GACNNNNGTC	1 cut(s)	433
Psp5II	RGGWCCY	1 cut(s)	1163
Psp6I	CCWGG	1 cut(s)	920
PspFI	CCCAGC	1 cut(s)	514
PspGI	CCWGG	1 cut(s)	920
PspN4I	GGNNCC	7 cut(s)	7, 217, 461, 508, 610, 1065, 1321
PspPI	GGNCC	3 cut(s)	337, 1163, 1523
PspPPI	RGGWCCY	1 cut(s)	1163
PstNI	CAGNNNCTG	2 cut(s)	259, 1115
PsuI	RGATCY	2 cut(s)	185, 998
RsaI	GTAC	1 cut(s)	1131
RsaNI	GTAC	1 cut(s)	1130
RseI	CAYNNNNRTG	3 cut(s)	377, 1049, 1328
SalI	GTCGAC	1 cut(s)	158
SaqAI	TTAA	3 cut(s)	936, 1401, 1424
Sau3AI	GATC	7 cut(s)	185, 190, 326, 911, 998, 1438, 1468
Sau96I	GGNCC	3 cut(s)	337, 1163, 1523
SchI	GAGTC	5 cut(s)	221, 304, 411, 1312, 1382
ScrFI	CCNGG	4 cut(s)	213, 922, 1012, 1266
SduI	GDGCHC	2 cut(s)	8, 1322
SfaNI	GCATC	7 cut(s)	715, 724, 739, 1092, 1360, 1468, 1504
SfoI	GGCGCC	1 cut(s)	610
SinI	GGWCC	2 cut(s)	337, 1163
SmiMI	CAYNNNNRTG	3 cut(s)	377, 1049, 1328
SpeI	ACTAGT	1 cut(s)	154
SphI	GCATGC	1 cut(s)	1390
Sse9I	AATT	9 cut(s)	15, 246, 520, 759, 826, 962, 1277, 1378, 1432
SseBI	AGGCCT	1 cut(s)	1024
SspDI	GGCGCC	1 cut(s)	608
SspMI	CTAG	3 cut(s)	155, 995, 1413
StuI	AGGCCT	1 cut(s)	1024
StyD4I	CCNGG	4 cut(s)	211, 920, 1010, 1264
StyI	CCWWGG	2 cut(s)	333, 612
TaaI	ACNGT	3 cut(s)	794, 1344, 1532
TaiI	ACGT	1 cut(s)	1218
TaqI	TCGA	5 cut(s)	159, 225, 453, 818, 1376
TaqII	GACCGA	1 cut(s)	354
TasI	AATT	9 cut(s)	15, 246, 520, 759, 826, 962, 1277, 1378, 1432
TauI	GCSGC	5 cut(s)	398, 730, 786, 807, 894
TfiI	GAWTC	2 cut(s)	815, 1450
Tru1I	TTAA	3 cut(s)	936, 1401, 1424
Tru9I	TTAA	3 cut(s)	936, 1401, 1424
TscAI	CASTG	5 cut(s)	321, 559, 799, 1051, 1065
TseFI	GTSAC	1 cut(s)	1211
Tsp45I	GTSAC	1 cut(s)	1211
TspDTI	ATGAA	5 cut(s)	665, 771, 1234, 1445, 1533
TspGWI	ACGGA	2 cut(s)	1452, 1520
TspRI	CASTG	5 cut(s)	321, 559, 799, 1051, 1065
Van91I	CCANNNNNTGG	1 cut(s)	456
VpaK11BI	GGWCC	2 cut(s)	337, 1163
XapI	RAATTY	4 cut(s)	246, 1277, 1378, 1432
XbaI	TCTAGA	1 cut(s)	1412
XceI	RCATGY	1 cut(s)	1390
XmiI	GTMKAC	1 cut(s)	159
XmnI	GAANNNNTTC	1 cut(s)	771
XspI	CTAG	3 cut(s)	155, 995, 1413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.