MD09G1009800.v1.1

Nodulin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0010417
Physical Location & Seq
Forward (+)
673828 .. 676625
2798 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1009800.v1.1.491

Sequence Viewer

Length: 1788 bp
ATGGGTCGGGTGCAGGAGAAGCTGCGGTCCTTCTTCAGCAACCGATGGCTGGTTTTCGTGGCGGCAATGTGGGTGCAGTCCTGTGCGGGAATCGGCTACTTGTTCGGGAGCATATCACCGGTGATCAAGAGCTCCATGGACTACAATCAGCGGGAGATTGCGCGGCTGGGCGTGGCTAAAGATCTCGGGGACAGCGTTGGGTTTTTGGCGGGGAGTTTGTGCGAGGTGCTGCCTCTGTGGGCGGCGCTGCTCGTTGGTGCTCTGATGAATTTTGTTGGGTACGGTTGGGTGTGGCTTGTTGTTACTGGTCGAGCTCCTTCGCTGAACTTGTGGGCTATGTGCATTCTTATATTTGTGGGAACAAACGGCGAGACCTTCTTCAACACAGTTGCTCTGGTCTCTTGTGTGCAAAACTTCCCAAAAAGTCGGGGTCCCGTGGTTGGAATACTCAAGGGCTTTGCTGGGTTGAGCGGCGCAATTCTGACACAGATATATGTGATGATCCATTCCCCAGATCATGCATCTTTGATTTTCATGGTTGCGGTTGGTCCAGCAATGGTGGTTATTGCATTAATGTTTATAGTCAGACCGGTTGGAGGTCACAGACAAGTCCGGCCAACCGATTCCATGAGCTTCACGTTTATTTATAGCCTGTGCCTCCTATTAGCTGCTTATTTGATGGGGGTCATGCTAGTTGAAGATCTAATTGATTTGAGCCACACCGTGATGGTTATATTTACATCGGTTTTGTTTGTGCTCCTGTTGATTCCCGTTGTGATTCCCATTTCGTTGAGCATTTCCTCCGAGGCAAGATCTCTAGAAGAAGAGGCACTCCTACCCGAGCCACAGACACAAGACCGTGGGAAATCTGGGCACGATGCAAATGAGGTAATATTTAGTGAGGTGGAAGACGAGAAGCCTAAGGAAATGGACTTACTTCCAGCATCCGAAAGGCAAAAACGAATTGCGCAATTGCAGTCGAAACTATTCCAAGCAGCTGCCGAAGGAGCAGTTAGGATTAAGAGGAGGAGAGGTCCGCATAGAGGGGAGGACTTCACATTGACACAAGCTTTGATCAAAGCCGACTTTTGGCTTATTTTTTTCTCACTTCTCTTGGGTTCTGGATCTGGTTTAACGGTGATTGATAACCTCGGTCAGATGAGCCAGTCTCTCGGGTATGACAATACGCATATATTTGTGTCCATGATCAGCATCTGGAACTTTCTTGGTCGGGTTGGTGGCGGTTACTTCTCTGAGATCATTGTGAGGGACTTTGCTTATCCAAGACCGGTAGCAATGGCCGTGGCACAACTCCTTATGGCAGTTGGGCATATCTTCATTGCTTTCGGATGGCCTGGGGCAATGCACATTGCCACCATCTTGGTTGGGCTAGGCTATGGGGCTCATTGGGCTATCGTGCCAGCTGCTGCTTCTGAATTGTTTGGCTTGAAAAAGTTCGGGGCTTTATACAATTTCCTCACAATTGCAAACCCTGCTGGTTCGTTGCTCTTTTCTGGCCTGATTGCTAGCAGTATATACGACTTTGAAGCTGAGAAGCAAGCTCATCAGCACCATCACCCGCATATGAGTCCAGGAACATCAGTTTTCCAAGGCATGCTTCGAATGGACGCACCAAAGTGTGACGGTTCTATATGCTTCTTCTTAACTTCGTTAATCATGTCCGGATTATGCATTGTTGCCTTTGTTTTAAGCATGATTCTGGTACATCGGACTAAGATTGTATACGCCCACCTGTATGGAAAATCACGTCCAGCTGGGATTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nodulin-like

Protein Analysis

596

Amino Acids

64.95

Weight (kDa)

8.07

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nodulin-like PF06813 15 - 262 2.1e-95 Nodulin-like
NFD4_C PF23262 357 - 519 3.7e-16 NFD4, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010417)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01930 AT3G01930 AT5G14120
fragaria_vesca FvH4_6g53700 FvH4_6g53700 FvH4_6g53700
malus_domestica MD09G1009800.v1.1 MD17G1000700.v1.1
prunus_persica Prupe.3G307300_v2.0.a1
pyrus_communis pycom111g00780 pycom17g00820
rosa_chinensis RchiOBHm_Chr2g0175771
rosa_laevigata RLG00000022357
rosa_multiflora Rmu_sc0016745.1_g000001
rosa_roxburghii Rroxscaffold_2G00077030
rosa_rugosa Rorug02G0587600
rosa_samantha Rh2AG666600 Rh2BG678000 Rh2CG641100 Rh2DG691800
rosa_wichuraiana Rw2G054660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 969
AccBSI CCGCTC 1 cut(s) 471
AccI GTMKAC 1 cut(s) 1743
AccII CGCG 1 cut(s) 163
AccIII TCCGGA 1 cut(s) 1682
AclWI GGATC 2 cut(s) 496, 1132
AcoI YGGCCR 2 cut(s) 614, 1299
AcsI RAATTY 1 cut(s) 268
AcuI CTGAAG 1 cut(s) 19
AdeI CACNNNGTG 1 cut(s) 724
AfaI GTAC 2 cut(s) 281, 1725
AfiI CCNNNNNNNGG 5 cut(s) 49, 440, 596, 1043, 1089
AgeI ACCGGT 3 cut(s) 118, 589, 1288
AgsI TTSAA 4 cut(s) 382, 698, 1450, 1547
AjiI CACGTC 1 cut(s) 1769
AjnI CCWGG 2 cut(s) 1354, 1591
AjuI GAANNNNNNNTTGG 2 cut(s) 1602, 1634
AleI CACNNNNGTG 1 cut(s) 1636
Alw21I GWGCWC 4 cut(s) 134, 262, 316, 759
Alw26I GTCTC 3 cut(s) 365, 403, 1173
AlwI GGATC 2 cut(s) 496, 1132
AlwNI CAGNNNCTG 2 cut(s) 1215, 1427
Ama87I CYCGRG 3 cut(s) 185, 839, 1172
Aor13HI TCCGGA 1 cut(s) 1682
AoxI GGCC 4 cut(s) 614, 1299, 1352, 1516
ApeKI GCWGC 8 cut(s) 22, 229, 247, 668, 995, 998, 1424, 1427
ApoI RAATTY 1 cut(s) 268
ArsI GACNNNNNNTTYG 2 cut(s) 1054, 1086
AseI ATTAAT 1 cut(s) 572
AsiGI ACCGGT 3 cut(s) 118, 589, 1288
Asp700I GAANNNNTTC 2 cut(s) 986, 1454
AspLEI GCGC 4 cut(s) 163, 247, 476, 970
AspS9I GGNCC 4 cut(s) 27, 431, 548, 1034
AsuHPI GGTGA 4 cut(s) 108, 133, 1150, 1568
AsuII TTCGAA 1 cut(s) 1621
AsuNHI GCTAGC 1 cut(s) 1526
AvaI CYCGRG 3 cut(s) 185, 839, 1172
AvaII GGWCC 4 cut(s) 27, 431, 548, 1034
AxyI CCTNAGG 1 cut(s) 921
BaeGI GKGCMC 1 cut(s) 876
BanII GRGCYC 3 cut(s) 134, 316, 1405
BbsI GAAGAC 1 cut(s) 915
Bbv12I GWGCWC 4 cut(s) 134, 262, 316, 759
BbvI GCAGC 8 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414
BccI CCATC 6 cut(s) 39, 673, 721, 1344, 1385, 1581
BceAI ACGGC 2 cut(s) 382, 1286
BciT130I CCWGG 2 cut(s) 1356, 1593
BclI TGATCA 3 cut(s) 123, 1074, 1206
BcoDI GTCTC 3 cut(s) 365, 403, 1173
BfaI CTAG 4 cut(s) 692, 818, 1391, 1527
BfoI RGCGCY 1 cut(s) 248
BglII AGATCT 3 cut(s) 181, 700, 812
Bme1390I CCNGG 2 cut(s) 1356, 1593
Bme18I GGWCC 4 cut(s) 27, 431, 548, 1034
BmeT110I CYCGRG 3 cut(s) 185, 839, 1172
BmgBI CACGTC 1 cut(s) 1769
BmgT120I GGNCC 4 cut(s) 27, 431, 548, 1034
BmiI GGNNCC 2 cut(s) 432, 433
BmrFI CCNGG 2 cut(s) 1356, 1593
BmsI GCATC 4 cut(s) 530, 868, 953, 1221
BmtI GCTAGC 1 cut(s) 1530
BpiI GAAGAC 1 cut(s) 915
BplI GAGNNNNNCTC 2 cut(s) 1153, 1185
Bpu14I TTCGAA 1 cut(s) 1621
BpuEI CTTGAG 1 cut(s) 434
BsaBI GATNNNNATC 1 cut(s) 1211
BsaI GGTCTC 2 cut(s) 365, 403
BsaJI CCNNGG 8 cut(s) 135, 435, 804, 859, 1150, 1302, 1355, 1609
BsaWI WCCGGW 4 cut(s) 118, 589, 1288, 1682
BsaXI ACNNNNNCTCC 2 cut(s) 1018, 1048
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 440, 596, 1043, 1089
Bse118I RCCGGY 3 cut(s) 118, 589, 1288
Bse1I ACTGG 2 cut(s) 310, 1165
Bse21I CCTNAGG 1 cut(s) 921
Bse3DI GCAATG 6 cut(s) 72, 561, 1302, 1338, 1368, 1368
Bse8I GATNNNNATC 1 cut(s) 1211
BseAI TCCGGA 1 cut(s) 1682
BseBI CCWGG 2 cut(s) 1356, 1593
BseDI CCNNGG 8 cut(s) 135, 435, 804, 859, 1150, 1302, 1355, 1609
BseGI GGATG 2 cut(s) 944, 1355
BseJI GATNNNNATC 1 cut(s) 1211
BseLI CCNNNNNNNGG 5 cut(s) 49, 440, 596, 1043, 1089
BseMI GCAATG 6 cut(s) 72, 561, 1302, 1338, 1368, 1368
BseMII CTCAG 2 cut(s) 1245, 1542
BseNI ACTGG 2 cut(s) 310, 1165
BseRI GAGGAG 2 cut(s) 1039, 1042
BseSI GKGCMC 1 cut(s) 876
BseXI GCAGC 8 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414
BseYI CCCAGC 3 cut(s) 166, 461, 1775
BsgI GTGCAG 2 cut(s) 32, 95
Bsh1236I CGCG 1 cut(s) 163
BshFI GGCC 4 cut(s) 616, 1301, 1354, 1518
BshTI ACCGGT 3 cut(s) 118, 589, 1288
BsiHKAI GWGCWC 4 cut(s) 134, 262, 316, 759
BsiHKCI CYCGRG 3 cut(s) 185, 839, 1172
BsiSI CCGG 5 cut(s) 119, 590, 613, 1289, 1683
BslFI GGGAC 3 cut(s) 203, 417, 1283
BslI CCNNNNNNNGG 5 cut(s) 49, 440, 596, 1043, 1089
BsmAI GTCTC 3 cut(s) 365, 403, 1173
BsmFI GGGAC 3 cut(s) 203, 417, 1283
BsmI GAATGC 1 cut(s) 342
BsnI GGCC 4 cut(s) 616, 1301, 1354, 1518
Bso31I GGTCTC 2 cut(s) 365, 403
BsoBI CYCGRG 3 cut(s) 185, 839, 1172
Bsp119I TTCGAA 1 cut(s) 1621
Bsp1286I GDGCHC 6 cut(s) 134, 262, 316, 759, 876, 1405
Bsp13I TCCGGA 1 cut(s) 1682
Bsp19I CCATGG 1 cut(s) 135
BspANI GGCC 4 cut(s) 616, 1301, 1354, 1518
BspCNI CTCAG 2 cut(s) 1246, 1543
BspEI TCCGGA 1 cut(s) 1682
BspFNI CGCG 1 cut(s) 163
BspHI TCATGA 1 cut(s) 1784
BspLI GGNNCC 2 cut(s) 432, 433
BspOI GCTAGC 1 cut(s) 1530
BspPI GGATC 2 cut(s) 496, 1132
BspT104I TTCGAA 1 cut(s) 1621
BspTNI GGTCTC 2 cut(s) 365, 403
BsrBI CCGCTC 1 cut(s) 471
BsrDI GCAATG 6 cut(s) 72, 561, 1302, 1338, 1368, 1368
BsrFI RCCGGY 3 cut(s) 118, 589, 1288
BsrI ACTGG 2 cut(s) 310, 1165
BssAI RCCGGY 3 cut(s) 118, 589, 1288
BssECI CCNNGG 8 cut(s) 135, 435, 804, 859, 1150, 1302, 1355, 1609
BssNAI GTATAC 1 cut(s) 1744
BssT1I CCWWGG 2 cut(s) 135, 1609
Bst1107I GTATAC 1 cut(s) 1744
Bst2UI CCWGG 2 cut(s) 1356, 1593
Bst4CI ACNGT 6 cut(s) 284, 388, 724, 860, 1138, 1646
Bst6I CTCTTC 1 cut(s) 819
BstAPI GCANNNNNTGC 1 cut(s) 1493
BstBI TTCGAA 1 cut(s) 1621
BstC8I GCNNGC 4 cut(s) 1422, 1528, 1560, 1616
BstDEI CTNAG 4 cut(s) 921, 1254, 1551, 1734
BstDSI CCRYGG 4 cut(s) 135, 435, 859, 1302
BstF5I GGATG 2 cut(s) 944, 1355
BstFNI CGCG 1 cut(s) 163
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 4 cut(s) 163, 247, 476, 970
BstMAI GTCTC 3 cut(s) 365, 403, 1173
BstMWI GCNNNNNNNGC 4 cut(s) 19, 1007, 1409, 1493
BstNI CCWGG 2 cut(s) 1356, 1593
BstNSI RCATGY 1 cut(s) 1618
BstSCI CCNGG 2 cut(s) 1354, 1591
BstSLI GKGCMC 1 cut(s) 876
BstUI CGCG 1 cut(s) 163
BstV1I GCAGC 8 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414
BstV2I GAAGAC 1 cut(s) 915
BstX2I RGATCY 4 cut(s) 181, 700, 812, 1124
BstXI CCANNNNNNTGG 2 cut(s) 1381, 1757
BstYI RGATCY 4 cut(s) 181, 700, 812, 1124
BstZ17I GTATAC 1 cut(s) 1744
Bsu36I CCTNAGG 1 cut(s) 921
BsuRI GGCC 4 cut(s) 616, 1301, 1354, 1518
BtgI CCRYGG 4 cut(s) 135, 435, 859, 1302
BtrI CACGTC 1 cut(s) 1769
BtsCI GGATG 2 cut(s) 944, 1355
Cac8I GCNNGC 4 cut(s) 1422, 1528, 1560, 1616
CaiI CAGNNNCTG 2 cut(s) 1215, 1427
CciI TCATGA 1 cut(s) 1784
CfoI GCGC 4 cut(s) 163, 247, 476, 970
Cfr10I RCCGGY 3 cut(s) 118, 589, 1288
Cfr13I GGNCC 4 cut(s) 27, 431, 548, 1034
CseI GACGC 1 cut(s) 1637
Csp6I GTAC 2 cut(s) 280, 1724
CspAI ACCGGT 3 cut(s) 118, 589, 1288
CspCI CAANNNNNGTGG 2 cut(s) 1284, 1319
CviQI GTAC 2 cut(s) 280, 1724
DdeI CTNAG 4 cut(s) 921, 1254, 1551, 1734
DraIII CACNNNGTG 1 cut(s) 724
EaeI YGGCCR 2 cut(s) 614, 1299
Eam1104I CTCTTC 1 cut(s) 819
EarI CTCTTC 1 cut(s) 819
Ecl136II GAGCTC 2 cut(s) 132, 314
Eco130I CCWWGG 2 cut(s) 135, 1609
Eco24I GRGCYC 3 cut(s) 134, 316, 1405
Eco31I GGTCTC 2 cut(s) 365, 403
Eco47I GGWCC 4 cut(s) 27, 431, 548, 1034
Eco53kI GAGCTC 2 cut(s) 132, 314
Eco57I CTGAAG 1 cut(s) 19
Eco81I CCTNAGG 1 cut(s) 921
Eco88I CYCGRG 3 cut(s) 185, 839, 1172
EcoICRI GAGCTC 2 cut(s) 132, 314
EcoO109I RGGNCCY 1 cut(s) 431
EcoRII CCWGG 2 cut(s) 1354, 1591
EcoT14I CCWWGG 2 cut(s) 135, 1609
EcoT22I ATGCAT 2 cut(s) 523, 1694
EcoT38I GRGCYC 3 cut(s) 134, 316, 1405
ErhI CCWWGG 2 cut(s) 135, 1609
FalI AAGNNNNNCTT 2 cut(s) 1602, 1634
FaqI GGGAC 3 cut(s) 203, 417, 1283
FauI CCCGC 4 cut(s) 79, 144, 202, 1587
FauNDI CATATG 1 cut(s) 1584
FbaI TGATCA 3 cut(s) 123, 1074, 1206
FblI GTMKAC 1 cut(s) 1743
FokI GGATG 2 cut(s) 931, 1362
FriOI GRGCYC 3 cut(s) 134, 316, 1405
FspBI CTAG 4 cut(s) 692, 818, 1391, 1527
FspI TGCGCA 1 cut(s) 969
GlaI GCGC 4 cut(s) 162, 246, 475, 969
GsaI CCCAGC 3 cut(s) 170, 465, 1779
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 4 cut(s) 616, 1301, 1354, 1518
HapII CCGG 5 cut(s) 119, 590, 613, 1289, 1683
HgaI GACGC 1 cut(s) 1637
HhaI GCGC 4 cut(s) 163, 247, 476, 970
Hin6I GCGC 4 cut(s) 161, 245, 474, 968
HinP1I GCGC 4 cut(s) 161, 245, 474, 968
HindIII AAGCTT 1 cut(s) 1068
HinfI GANTC 6 cut(s) 90, 623, 766, 778, 1588, 1717
HpaII CCGG 5 cut(s) 119, 590, 613, 1289, 1683
HphI GGTGA 4 cut(s) 108, 133, 1150, 1568
Hpy166II GTNNAC 1 cut(s) 1744
Hpy188III TCNNGA 7 cut(s) 106, 127, 818, 1122, 1216, 1683, 1785
Hpy8I GTNNAC 1 cut(s) 1744
HpyAV CCTTC 4 cut(s) 40, 327, 385, 998
HpyCH4III ACNGT 6 cut(s) 284, 388, 724, 860, 1138, 1646
HpyCH4IV ACGT 2 cut(s) 638, 1768
HpyF10VI GCNNNNNNNGC 4 cut(s) 19, 1007, 1409, 1493
HpyF3I CTNAG 4 cut(s) 921, 1254, 1551, 1734
HpySE526I ACGT 2 cut(s) 638, 1768
HspAI GCGC 4 cut(s) 161, 245, 474, 968
KflI GGGWCCC 1 cut(s) 431
Kpn2I TCCGGA 1 cut(s) 1682
Ksp22I TGATCA 3 cut(s) 123, 1074, 1206
LmnI GCTCC 5 cut(s) 108, 137, 319, 762, 1007
Lsp1109I GCAGC 8 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414
LweI GCATC 4 cut(s) 530, 868, 953, 1221
MaeI CTAG 4 cut(s) 692, 818, 1391, 1527
MaeII ACGT 2 cut(s) 638, 1768
MaeIII GTNAC 4 cut(s) 301, 599, 1244, 1640
MbiI CCGCTC 1 cut(s) 471
MboII GAAGA 8 cut(s) 25, 370, 710, 833, 836, 920, 1327, 1651
MfeI CAATTG 2 cut(s) 971, 1482
MflI RGATCY 4 cut(s) 181, 700, 812, 1124
MhlI GDGCHC 6 cut(s) 134, 262, 316, 759, 876, 1405
MluCI AATT 8 cut(s) 268, 477, 705, 963, 971, 1436, 1471, 1482
MlyI GAGTC 1 cut(s) 1597
MmeI TCCRAC 2 cut(s) 421, 574
Mph1103I ATGCAT 2 cut(s) 523, 1694
MroI TCCGGA 1 cut(s) 1682
MroXI GAANNNNTTC 2 cut(s) 986, 1454
MseI TTAA 6 cut(s) 572, 1020, 1133, 1664, 1673, 1709
MslI CAYNNNNRTG 3 cut(s) 725, 1636, 1755
MspA1I CMGCKG 4 cut(s) 151, 998, 1424, 1775
MspI CCGG 5 cut(s) 119, 590, 613, 1289, 1683
MspR9I CCNGG 2 cut(s) 1356, 1593
MunI CAATTG 2 cut(s) 971, 1482
Mva1269I GAATGC 1 cut(s) 342
MvaI CCWGG 2 cut(s) 1356, 1593
MvnI CGCG 1 cut(s) 163
MwoI GCNNNNNNNGC 4 cut(s) 19, 1007, 1409, 1493
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 1 cut(s) 1584
NheI GCTAGC 1 cut(s) 1526
NlaIV GGNNCC 2 cut(s) 432, 433
NmuCI GTSAC 2 cut(s) 599, 1640
NsbI TGCGCA 1 cut(s) 969
NsiI ATGCAT 2 cut(s) 523, 1694
NspI RCATGY 1 cut(s) 1618
NspV TTCGAA 1 cut(s) 1621
OliI CACNNNNGTG 1 cut(s) 1636
PaeI GCATGC 1 cut(s) 1618
PagI TCATGA 1 cut(s) 1784
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PctI GAATGC 1 cut(s) 342
PdmI GAANNNNTTC 2 cut(s) 986, 1454
PfeI GAWTC 5 cut(s) 90, 623, 766, 778, 1717
PfoI TCCNGGA 1 cut(s) 1591
PinAI ACCGGT 3 cut(s) 118, 589, 1288
PleI GAGTC 1 cut(s) 1596
PpsI GAGTC 1 cut(s) 1596
PpuMI RGGWCCY 1 cut(s) 431
PshBI ATTAAT 1 cut(s) 572
Psp124BI GAGCTC 2 cut(s) 134, 316
Psp5II RGGWCCY 1 cut(s) 431
Psp6I CCWGG 2 cut(s) 1354, 1591
PspFI CCCAGC 3 cut(s) 166, 461, 1775
PspGI CCWGG 2 cut(s) 1354, 1591
PspN4I GGNNCC 2 cut(s) 432, 433
PspPI GGNCC 4 cut(s) 27, 431, 548, 1034
PspPPI RGGWCCY 1 cut(s) 431
PstNI CAGNNNCTG 2 cut(s) 1215, 1427
PsuI RGATCY 4 cut(s) 181, 700, 812, 1124
PvuII CAGCTG 3 cut(s) 998, 1424, 1775
RsaI GTAC 2 cut(s) 281, 1725
RsaNI GTAC 2 cut(s) 280, 1724
RseI CAYNNNNRTG 3 cut(s) 725, 1636, 1755
SacI GAGCTC 2 cut(s) 134, 316
SaqAI TTAA 6 cut(s) 572, 1020, 1133, 1664, 1673, 1709
Sau96I GGNCC 4 cut(s) 27, 431, 548, 1034
SchI GAGTC 1 cut(s) 1597
ScrFI CCNGG 2 cut(s) 1356, 1593
SduI GDGCHC 6 cut(s) 134, 262, 316, 759, 876, 1405
SfaNI GCATC 4 cut(s) 530, 868, 953, 1221
SfuI TTCGAA 1 cut(s) 1621
SgrAI CRCCGGYG 1 cut(s) 118
SinI GGWCC 4 cut(s) 27, 431, 548, 1034
SmiMI CAYNNNNRTG 3 cut(s) 725, 1636, 1755
SmlI CTYRAG 1 cut(s) 449
SmoI CTYRAG 1 cut(s) 449
SphI GCATGC 1 cut(s) 1618
Sse9I AATT 8 cut(s) 268, 477, 705, 963, 971, 1436, 1471, 1482
SspI AATATT 1 cut(s) 894
SspMI CTAG 4 cut(s) 692, 818, 1391, 1527
SstI GAGCTC 2 cut(s) 134, 316
StyD4I CCNGG 2 cut(s) 1354, 1591
StyI CCWWGG 2 cut(s) 135, 1609
TaaI ACNGT 6 cut(s) 284, 388, 724, 860, 1138, 1646
TaiI ACGT 2 cut(s) 641, 1771
TaqI TCGA 3 cut(s) 310, 980, 1621
TaqII GACCGA 1 cut(s) 1142
TasI AATT 8 cut(s) 268, 477, 705, 963, 971, 1436, 1471, 1482
TauI GCSGC 4 cut(s) 65, 166, 245, 474
TfiI GAWTC 5 cut(s) 90, 623, 766, 778, 1717
Tru1I TTAA 6 cut(s) 572, 1020, 1133, 1664, 1673, 1709
Tru9I TTAA 6 cut(s) 572, 1020, 1133, 1664, 1673, 1709
TseFI GTSAC 2 cut(s) 599, 1640
TseI GCWGC 8 cut(s) 22, 229, 247, 668, 995, 998, 1424, 1427
Tsp45I GTSAC 2 cut(s) 599, 1640
TspDTI ATGAA 4 cut(s) 281, 523, 1327, 1773
VpaK11BI GGWCC 4 cut(s) 27, 431, 548, 1034
VspI ATTAAT 1 cut(s) 572
XapI RAATTY 1 cut(s) 268
XbaI TCTAGA 1 cut(s) 817
XceI RCATGY 1 cut(s) 1618
XmiI GTMKAC 1 cut(s) 1743
XmnI GAANNNNTTC 2 cut(s) 986, 1454
XspI CTAG 4 cut(s) 692, 818, 1391, 1527
Zsp2I ATGCAT 2 cut(s) 523, 1694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.