MD17G1000700.v1.1

Nodulin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0010417
Physical Location & Seq
Reverse (-)
32743 .. 36101
3359 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1000700.v1.1.491

Sequence Viewer

Length: 1788 bp
ATGGGTCGGGTGCAGGAGAAGCTGCGGTCCTTCTTCAACAACAGATGGCTGGTTTTTGTGGCGGCAATGTGGGTGCAGTCCTGTGCGGGAATTGGCTACCTGTTCGGGAGCATATCGCCGGTGATCAAGAGCTCCATGGACTACAATCAGCGGCAGATTGCGCGGCTGGGTGTGGCTAAAGATCTCGGGGACAGCGTTGGGTTTTTGGCGGGGAGCTTGTGCGAGGTGCTGCCATTGTGGGCGGCGCTGCTCGTTGGTGCTCTGATGAACTTTGTTGGGTACGGTTGGGTTTGGCTTGTTGTTACTGGTCGAGCTCCTTCTTTGAATTTGTGGGCTATGTGTATTCTTATATTTGTGGGAACAAATGGCGAGACCTTCTTCAATACAGTTGCTTTGGTCTCTTGTGTGCAAAACTTCCCAAAAAGTCGGGGTCCTGTGGTTGGAATTCTCAAGGGCTTTGCTGGGTTGGGCGGCGCAATTCTGACTCAGATATATGTGATGATCCATTCACCAGATCATGCATCTTTGATTTTCATGGTTGCGGTTGGTCCAGCAATGGTGGTTATTGCTTTAATGTTTATTGTCAGACCGGTTGGAGGTCACAGACAAGTCCGACCAACTGATGACATGAGCTTCACGTTTATTTATAGTCTGTGCCTCCTATTAGCTGCTTATTTGATGGGGGTCATGCTAGTTGAAGATCTAATTGATTTGAGCCACACCGTGTTGATTATATTTACAGCGATTTTGTTTGTGCTCCTGTTGATTCCCGTAGTGATTCCCATTTCGTTGAGCTTTTCTTCTGAGTCAAGATCTCTAGAAGAAGAGGCACTCCTACCCGAGCCACAGAAACAAGACCCTGGGAAATCTGGGCACGATGCTAATGAGGTAATATTTAGTGAGGTGGAAGATGAGAAGCCTAAGGAAATGGACTTACTTCCAGCATCTGAAAGGCAAAAACGAATTGCACAATTGCAATCGAAACTATTCCAAGCAGCTGCCGATGGAGCAGTTAGGGTTAAGAGGAGGACCGGTCCGCGTAGAGGGGAAGACTTCACCTTGACACAAGCTTTGATCAAAGCAGACTTTTGGCTGATTTTTTTCTCACTTCTCTTGGGTTCAGGATCTGGTTTGACAGTGATTGATAACCTCGGTCAGATGAGCCAGTCTCTCGGGTATGATGATACACATATATTTGTATCCATGATCAGCATCTGGAACTTTCTTGGTCGGGTTGGTGGCGGTTACTTCTCTGAGATTATTGTGAGGGACTATGCTTATCCAAGACCGGTAGCAATGGCTGTGGCACAATTCATTATGGCAATTGGGCATATCTTCATTGCTTTCGGATGGCCTGGGGCAATGCACATTGCCACCATCTTGGTTGGGCTAGGCTATGGGGCACATTGGGCGATAGTGCCAGCTGCTGCTTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTGTACAATTTCCTCACAATTGCAAACCCTGCTGGTTCGTTGCTCTTTTCTGGCGTGATTGCTAGCAGCATATACGACTTTGAAGCTGAGAAGCAAGCTCATCAGCACCATCACCTGCATATGAGTCCAGGAACATCAGTTTTCCAAGGCATGCTTCGAATGGACGCGCCAAAGTGTGACGGTTCTATATGCTTCTTCTTAACTTCGTTAATCATGTCCGGATTATGCATTGTTGCCTTTGTTTTAAGCATGATTCTGGTACATCGGACTAAGATTGTATATGCCAACCTGTATGGAAAATCACGTCCAGCTGGGCTTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nodulin-like

Protein Analysis

596

Amino Acids

64.97

Weight (kDa)

7.66

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nodulin-like PF06813 15 - 262 1.1e-95 Nodulin-like
NFD4_C PF23262 357 - 519 5.9e-15 NFD4, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010417)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01930 AT3G01930 AT5G14120
fragaria_vesca FvH4_6g53700 FvH4_6g53700 FvH4_6g53700
malus_domestica MD09G1009800.v1.1 MD17G1000700.v1.1
prunus_persica Prupe.3G307300_v2.0.a1
pyrus_communis pycom111g00780 pycom17g00820
rosa_chinensis RchiOBHm_Chr2g0175771
rosa_laevigata RLG00000022357
rosa_multiflora Rmu_sc0016745.1_g000001
rosa_roxburghii Rroxscaffold_2G00077030
rosa_rugosa Rorug02G0587600
rosa_samantha Rh2AG666600 Rh2BG678000 Rh2CG641100 Rh2DG691800
rosa_wichuraiana Rw2G054660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1587
Acc36I ACCTGC 1 cut(s) 1587
AccII CGCG 3 cut(s) 163, 1039, 1631
AccIII TCCGGA 1 cut(s) 1682
AclWI GGATC 2 cut(s) 496, 1132
AcsI RAATTY 2 cut(s) 325, 444
AdeI CACNNNGTG 1 cut(s) 724
AfaI GTAC 3 cut(s) 281, 1469, 1725
AfiI CCNNNNNNNGG 3 cut(s) 440, 596, 1043
AgeI ACCGGT 3 cut(s) 589, 1031, 1288
AgsI TTSAA 6 cut(s) 37, 325, 382, 698, 1450, 1547
AjiI CACGTC 1 cut(s) 1769
AjnI CCWGG 3 cut(s) 859, 1354, 1591
AjuI GAANNNNNNNTTGG 2 cut(s) 1602, 1634
Alw21I GWGCWC 4 cut(s) 134, 262, 316, 759
Alw26I GTCTC 3 cut(s) 365, 403, 1173
AlwI GGATC 2 cut(s) 496, 1132
AlwNI CAGNNNCTG 4 cut(s) 947, 1127, 1215, 1427
Ama87I CYCGRG 3 cut(s) 185, 839, 1172
Aor13HI TCCGGA 1 cut(s) 1682
AoxI GGCC 1 cut(s) 1352
ApeKI GCWGC 9 cut(s) 22, 229, 247, 668, 995, 998, 1424, 1427, 1530
ApoI RAATTY 2 cut(s) 325, 444
ArsI GACNNNNNNTTYG 2 cut(s) 1054, 1086
AsiGI ACCGGT 3 cut(s) 589, 1031, 1288
Asp700I GAANNNNTTC 1 cut(s) 986
AspLEI GCGC 4 cut(s) 163, 247, 476, 1633
AspS9I GGNCC 5 cut(s) 27, 431, 548, 1029, 1034
AsuHPI GGTGA 4 cut(s) 133, 501, 1048, 1568
AsuII TTCGAA 1 cut(s) 1621
AsuNHI GCTAGC 1 cut(s) 1526
AvaI CYCGRG 3 cut(s) 185, 839, 1172
AvaII GGWCC 5 cut(s) 27, 431, 548, 1029, 1034
AxyI CCTNAGG 1 cut(s) 921
BaeGI GKGCMC 2 cut(s) 876, 1405
BanII GRGCYC 2 cut(s) 134, 316
BbsI GAAGAC 1 cut(s) 1056
Bbv12I GWGCWC 4 cut(s) 134, 262, 316, 759
BbvI GCAGC 9 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414, 1542
BccI CCATC 6 cut(s) 39, 673, 998, 1344, 1385, 1581
BciT130I CCWGG 3 cut(s) 861, 1356, 1593
BciVI GTATCC 1 cut(s) 1210
BclI TGATCA 3 cut(s) 123, 1074, 1206
BcoDI GTCTC 3 cut(s) 365, 403, 1173
BfaI CTAG 4 cut(s) 692, 818, 1391, 1527
BfoI RGCGCY 1 cut(s) 248
BfuAI ACCTGC 1 cut(s) 1587
BfuI GTATCC 1 cut(s) 1210
BglII AGATCT 3 cut(s) 181, 700, 812
Bme1390I CCNGG 3 cut(s) 861, 1356, 1593
Bme18I GGWCC 5 cut(s) 27, 431, 548, 1029, 1034
BmeT110I CYCGRG 3 cut(s) 185, 839, 1172
BmgBI CACGTC 1 cut(s) 1769
BmgT120I GGNCC 5 cut(s) 27, 431, 548, 1029, 1034
BmiI GGNNCC 1 cut(s) 432
BmrFI CCNGG 3 cut(s) 861, 1356, 1593
BmsI GCATC 4 cut(s) 530, 868, 953, 1221
BmtI GCTAGC 1 cut(s) 1530
BpiI GAAGAC 1 cut(s) 1056
BplI GAGNNNNNCTC 2 cut(s) 1153, 1185
Bpu14I TTCGAA 1 cut(s) 1621
BpuEI CTTGAG 1 cut(s) 434
BsaBI GATNNNNATC 1 cut(s) 1211
BsaI GGTCTC 2 cut(s) 365, 403
BsaJI CCNNGG 6 cut(s) 135, 859, 860, 1150, 1355, 1609
BsaWI WCCGGW 4 cut(s) 589, 1031, 1288, 1682
BsaXI ACNNNNNCTCC 2 cut(s) 1018, 1048
Bsc4I CCNNNNNNNGG 3 cut(s) 440, 596, 1043
Bse118I RCCGGY 4 cut(s) 118, 589, 1031, 1288
Bse1I ACTGG 2 cut(s) 310, 1165
Bse21I CCTNAGG 1 cut(s) 921
Bse3DI GCAATG 6 cut(s) 72, 561, 1302, 1338, 1368, 1368
Bse8I GATNNNNATC 1 cut(s) 1211
BseAI TCCGGA 1 cut(s) 1682
BseBI CCWGG 3 cut(s) 861, 1356, 1593
BseDI CCNNGG 6 cut(s) 135, 859, 860, 1150, 1355, 1609
BseGI GGATG 1 cut(s) 1355
BseJI GATNNNNATC 1 cut(s) 1211
BseLI CCNNNNNNNGG 3 cut(s) 440, 596, 1043
BseMI GCAATG 6 cut(s) 72, 561, 1302, 1338, 1368, 1368
BseMII CTCAG 4 cut(s) 500, 795, 1245, 1542
BseNI ACTGG 2 cut(s) 310, 1165
BseRI GAGGAG 1 cut(s) 1039
BseSI GKGCMC 2 cut(s) 876, 1405
BseXI GCAGC 9 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414, 1542
BseYI CCCAGC 3 cut(s) 166, 461, 1775
BsgI GTGCAG 2 cut(s) 32, 95
Bsh1236I CGCG 3 cut(s) 163, 1039, 1631
BshFI GGCC 1 cut(s) 1354
BshTI ACCGGT 3 cut(s) 589, 1031, 1288
BsiHKAI GWGCWC 4 cut(s) 134, 262, 316, 759
BsiHKCI CYCGRG 3 cut(s) 185, 839, 1172
BsiSI CCGG 5 cut(s) 119, 590, 1032, 1289, 1683
BslFI GGGAC 2 cut(s) 203, 1283
BslI CCNNNNNNNGG 3 cut(s) 440, 596, 1043
BsmAI GTCTC 3 cut(s) 365, 403, 1173
BsmFI GGGAC 2 cut(s) 203, 1283
BsnI GGCC 1 cut(s) 1354
Bso31I GGTCTC 2 cut(s) 365, 403
BsoBI CYCGRG 3 cut(s) 185, 839, 1172
Bsp119I TTCGAA 1 cut(s) 1621
Bsp1286I GDGCHC 6 cut(s) 134, 262, 316, 759, 876, 1405
Bsp13I TCCGGA 1 cut(s) 1682
Bsp1407I TGTACA 1 cut(s) 1467
Bsp143I GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
Bsp19I CCATGG 1 cut(s) 135
BspANI GGCC 1 cut(s) 1354
BspCNI CTCAG 4 cut(s) 499, 796, 1246, 1543
BspEI TCCGGA 1 cut(s) 1682
BspFNI CGCG 3 cut(s) 163, 1039, 1631
BspLI GGNNCC 1 cut(s) 432
BspMI ACCTGC 1 cut(s) 1587
BspOI GCTAGC 1 cut(s) 1530
BspPI GGATC 2 cut(s) 496, 1132
BspT104I TTCGAA 1 cut(s) 1621
BspTNI GGTCTC 2 cut(s) 365, 403
BsrDI GCAATG 6 cut(s) 72, 561, 1302, 1338, 1368, 1368
BsrFI RCCGGY 4 cut(s) 118, 589, 1031, 1288
BsrGI TGTACA 1 cut(s) 1467
BsrI ACTGG 2 cut(s) 310, 1165
BssAI RCCGGY 4 cut(s) 118, 589, 1031, 1288
BssECI CCNNGG 6 cut(s) 135, 859, 860, 1150, 1355, 1609
BssMI GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
BssT1I CCWWGG 2 cut(s) 135, 1609
Bst2UI CCWGG 3 cut(s) 861, 1356, 1593
Bst4CI ACNGT 5 cut(s) 284, 388, 724, 1138, 1646
Bst6I CTCTTC 1 cut(s) 819
BstAPI GCANNNNNTGC 1 cut(s) 1493
BstAUI TGTACA 1 cut(s) 1467
BstBI TTCGAA 1 cut(s) 1621
BstC8I GCNNGC 4 cut(s) 1422, 1528, 1560, 1616
BstDEI CTNAG 6 cut(s) 486, 804, 921, 1254, 1551, 1734
BstDSI CCRYGG 1 cut(s) 135
BstF5I GGATG 1 cut(s) 1355
BstFNI CGCG 3 cut(s) 163, 1039, 1631
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 4 cut(s) 163, 247, 476, 1633
BstKTI GATC 9 cut(s) 126, 184, 504, 517, 703, 815, 1077, 1127, 1209
BstMAI GTCTC 3 cut(s) 365, 403, 1173
BstMBI GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
BstMWI GCNNNNNNNGC 5 cut(s) 19, 160, 1007, 1409, 1493
BstNI CCWGG 3 cut(s) 861, 1356, 1593
BstNSI RCATGY 1 cut(s) 1618
BstSCI CCNGG 3 cut(s) 859, 1354, 1591
BstSLI GKGCMC 2 cut(s) 876, 1405
BstUI CGCG 3 cut(s) 163, 1039, 1631
BstV1I GCAGC 9 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414, 1542
BstV2I GAAGAC 1 cut(s) 1056
BstX2I RGATCY 4 cut(s) 181, 700, 812, 1124
BstXI CCANNNNNNTGG 1 cut(s) 1381
BstYI RGATCY 4 cut(s) 181, 700, 812, 1124
Bsu36I CCTNAGG 1 cut(s) 921
BsuI GTATCC 1 cut(s) 1210
BsuRI GGCC 1 cut(s) 1354
BtgI CCRYGG 1 cut(s) 135
BtrI CACGTC 1 cut(s) 1769
BtsCI GGATG 1 cut(s) 1355
BtsIMutI CAGTG 1 cut(s) 1143
BveI ACCTGC 1 cut(s) 1587
Cac8I GCNNGC 4 cut(s) 1422, 1528, 1560, 1616
CaiI CAGNNNCTG 4 cut(s) 947, 1127, 1215, 1427
CfoI GCGC 4 cut(s) 163, 247, 476, 1633
Cfr10I RCCGGY 4 cut(s) 118, 589, 1031, 1288
Cfr13I GGNCC 5 cut(s) 27, 431, 548, 1029, 1034
CpoI CGGWCCG 1 cut(s) 1034
CseI GACGC 1 cut(s) 1637
Csp6I GTAC 3 cut(s) 280, 1468, 1724
CspAI ACCGGT 3 cut(s) 589, 1031, 1288
CspCI CAANNNNNGTGG 2 cut(s) 1284, 1319
CspI CGGWCCG 1 cut(s) 1034
CviAII CATG 9 cut(s) 136, 518, 535, 628, 688, 1204, 1615, 1678, 1714
CviQI GTAC 3 cut(s) 280, 1468, 1724
DdeI CTNAG 6 cut(s) 486, 804, 921, 1254, 1551, 1734
DpnI GATC 9 cut(s) 125, 183, 503, 516, 702, 814, 1076, 1126, 1208
DpnII GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
DraIII CACNNNGTG 1 cut(s) 724
Eam1104I CTCTTC 1 cut(s) 819
EarI CTCTTC 1 cut(s) 819
Ecl136II GAGCTC 2 cut(s) 132, 314
Eco130I CCWWGG 2 cut(s) 135, 1609
Eco24I GRGCYC 2 cut(s) 134, 316
Eco31I GGTCTC 2 cut(s) 365, 403
Eco47I GGWCC 5 cut(s) 27, 431, 548, 1029, 1034
Eco53kI GAGCTC 2 cut(s) 132, 314
Eco81I CCTNAGG 1 cut(s) 921
Eco88I CYCGRG 3 cut(s) 185, 839, 1172
EcoICRI GAGCTC 2 cut(s) 132, 314
EcoO109I RGGNCCY 1 cut(s) 431
EcoRI GAATTC 1 cut(s) 444
EcoRII CCWGG 3 cut(s) 859, 1354, 1591
EcoT14I CCWWGG 2 cut(s) 135, 1609
EcoT22I ATGCAT 2 cut(s) 523, 1694
EcoT38I GRGCYC 2 cut(s) 134, 316
ErhI CCWWGG 2 cut(s) 135, 1609
FaeI CATG 9 cut(s) 139, 521, 538, 631, 691, 1207, 1618, 1681, 1717
FalI AAGNNNNNCTT 2 cut(s) 1602, 1634
FaqI GGGAC 2 cut(s) 203, 1283
FatI CATG 9 cut(s) 135, 517, 534, 627, 687, 1203, 1614, 1677, 1713
FauI CCCGC 2 cut(s) 79, 202
FauNDI CATATG 1 cut(s) 1584
FbaI TGATCA 3 cut(s) 123, 1074, 1206
FokI GGATG 1 cut(s) 1362
FriOI GRGCYC 2 cut(s) 134, 316
FspBI CTAG 4 cut(s) 692, 818, 1391, 1527
GlaI GCGC 4 cut(s) 162, 246, 475, 1632
GsaI CCCAGC 3 cut(s) 170, 465, 1779
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 1 cut(s) 1354
HapII CCGG 5 cut(s) 119, 590, 1032, 1289, 1683
HgaI GACGC 1 cut(s) 1637
HhaI GCGC 4 cut(s) 163, 247, 476, 1633
Hin1II CATG 9 cut(s) 139, 521, 538, 631, 691, 1207, 1618, 1681, 1717
Hin6I GCGC 4 cut(s) 161, 245, 474, 1631
HinP1I GCGC 4 cut(s) 161, 245, 474, 1631
HindIII AAGCTT 1 cut(s) 1068
HinfI GANTC 6 cut(s) 484, 766, 778, 806, 1588, 1717
HpaII CCGG 5 cut(s) 119, 590, 1032, 1289, 1683
HphI GGTGA 4 cut(s) 133, 501, 1048, 1568
Hpy188III TCNNGA 7 cut(s) 106, 127, 810, 818, 1122, 1216, 1683
HpyAV CCTTC 3 cut(s) 40, 327, 385
HpyCH4III ACNGT 5 cut(s) 284, 388, 724, 1138, 1646
HpyCH4IV ACGT 2 cut(s) 638, 1768
HpyF10VI GCNNNNNNNGC 5 cut(s) 19, 160, 1007, 1409, 1493
HpyF3I CTNAG 6 cut(s) 486, 804, 921, 1254, 1551, 1734
HpySE526I ACGT 2 cut(s) 638, 1768
Hsp92II CATG 9 cut(s) 139, 521, 538, 631, 691, 1207, 1618, 1681, 1717
HspAI GCGC 4 cut(s) 161, 245, 474, 1631
Kpn2I TCCGGA 1 cut(s) 1682
Ksp22I TGATCA 3 cut(s) 123, 1074, 1206
Kzo9I GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
LmnI GCTCC 6 cut(s) 108, 137, 213, 319, 762, 1007
Lsp1109I GCAGC 9 cut(s) 9, 216, 234, 655, 985, 1007, 1411, 1414, 1542
LweI GCATC 4 cut(s) 530, 868, 953, 1221
MaeI CTAG 4 cut(s) 692, 818, 1391, 1527
MaeII ACGT 2 cut(s) 638, 1768
MaeIII GTNAC 4 cut(s) 301, 599, 1244, 1640
MalI GATC 9 cut(s) 125, 183, 503, 516, 702, 814, 1076, 1126, 1208
MboI GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
MfeI CAATTG 3 cut(s) 971, 1323, 1482
MflI RGATCY 4 cut(s) 181, 700, 812, 1124
MhlI GDGCHC 6 cut(s) 134, 262, 316, 759, 876, 1405
MlyI GAGTC 3 cut(s) 478, 815, 1597
MmeI TCCRAC 3 cut(s) 421, 574, 637
Mph1103I ATGCAT 2 cut(s) 523, 1694
MroI TCCGGA 1 cut(s) 1682
MroXI GAANNNNTTC 1 cut(s) 986
MseI TTAA 5 cut(s) 572, 1020, 1664, 1673, 1709
MspA1I CMGCKG 4 cut(s) 151, 998, 1424, 1775
MspI CCGG 5 cut(s) 119, 590, 1032, 1289, 1683
MspR9I CCNGG 3 cut(s) 861, 1356, 1593
MunI CAATTG 3 cut(s) 971, 1323, 1482
MvaI CCWGG 3 cut(s) 861, 1356, 1593
MvnI CGCG 3 cut(s) 163, 1039, 1631
MwoI GCNNNNNNNGC 5 cut(s) 19, 160, 1007, 1409, 1493
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 1 cut(s) 1584
NdeII GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
NheI GCTAGC 1 cut(s) 1526
NlaIII CATG 9 cut(s) 139, 521, 538, 631, 691, 1207, 1618, 1681, 1717
NlaIV GGNNCC 1 cut(s) 432
NmuCI GTSAC 2 cut(s) 599, 1640
NsiI ATGCAT 2 cut(s) 523, 1694
NspI RCATGY 1 cut(s) 1618
NspV TTCGAA 1 cut(s) 1621
PaeI GCATGC 1 cut(s) 1618
PaqCI CACCTGC 1 cut(s) 1587
PasI CCCWGGG 1 cut(s) 860
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PdmI GAANNNNTTC 1 cut(s) 986
PfeI GAWTC 3 cut(s) 766, 778, 1717
PfoI TCCNGGA 1 cut(s) 1591
PinAI ACCGGT 3 cut(s) 589, 1031, 1288
PleI GAGTC 3 cut(s) 478, 814, 1596
PpsI GAGTC 3 cut(s) 478, 814, 1596
PpuMI RGGWCCY 1 cut(s) 431
Psp124BI GAGCTC 2 cut(s) 134, 316
Psp5II RGGWCCY 1 cut(s) 431
Psp6I CCWGG 3 cut(s) 859, 1354, 1591
PspFI CCCAGC 3 cut(s) 166, 461, 1775
PspGI CCWGG 3 cut(s) 859, 1354, 1591
PspN4I GGNNCC 1 cut(s) 432
PspPI GGNCC 5 cut(s) 27, 431, 548, 1029, 1034
PspPPI RGGWCCY 1 cut(s) 431
PstNI CAGNNNCTG 4 cut(s) 947, 1127, 1215, 1427
PsuI RGATCY 4 cut(s) 181, 700, 812, 1124
PvuII CAGCTG 3 cut(s) 998, 1424, 1775
RsaI GTAC 3 cut(s) 281, 1469, 1725
RsaNI GTAC 3 cut(s) 280, 1468, 1724
Rsr2I CGGWCCG 1 cut(s) 1034
RsrII CGGWCCG 1 cut(s) 1034
SacI GAGCTC 2 cut(s) 134, 316
SaqAI TTAA 5 cut(s) 572, 1020, 1664, 1673, 1709
Sau3AI GATC 9 cut(s) 123, 181, 501, 514, 700, 812, 1074, 1124, 1206
Sau96I GGNCC 5 cut(s) 27, 431, 548, 1029, 1034
SchI GAGTC 3 cut(s) 478, 815, 1597
ScrFI CCNGG 3 cut(s) 861, 1356, 1593
SduI GDGCHC 6 cut(s) 134, 262, 316, 759, 876, 1405
SfaNI GCATC 4 cut(s) 530, 868, 953, 1221
SfuI TTCGAA 1 cut(s) 1621
SgrAI CRCCGGYG 1 cut(s) 118
SinI GGWCC 5 cut(s) 27, 431, 548, 1029, 1034
SmlI CTYRAG 1 cut(s) 449
SmoI CTYRAG 1 cut(s) 449
SphI GCATGC 1 cut(s) 1618
SspI AATATT 1 cut(s) 894
SspMI CTAG 4 cut(s) 692, 818, 1391, 1527
SstI GAGCTC 2 cut(s) 134, 316
StyD4I CCNGG 3 cut(s) 859, 1354, 1591
StyI CCWWGG 2 cut(s) 135, 1609
TaaI ACNGT 5 cut(s) 284, 388, 724, 1138, 1646
TaiI ACGT 2 cut(s) 641, 1771
TaqI TCGA 3 cut(s) 310, 980, 1621
TaqII GACCGA 1 cut(s) 1142
TatI WGTACW 1 cut(s) 1467
TauI GCSGC 5 cut(s) 65, 154, 166, 245, 474
TfiI GAWTC 3 cut(s) 766, 778, 1717
Tru1I TTAA 5 cut(s) 572, 1020, 1664, 1673, 1709
Tru9I TTAA 5 cut(s) 572, 1020, 1664, 1673, 1709
TscAI CASTG 1 cut(s) 1143
TseFI GTSAC 2 cut(s) 599, 1640
TseI GCWGC 9 cut(s) 22, 229, 247, 668, 995, 998, 1424, 1427, 1530
Tsp45I GTSAC 2 cut(s) 599, 1640
TspDTI ATGAA 5 cut(s) 281, 523, 1303, 1327, 1773
TspRI CASTG 1 cut(s) 1143
VpaK11BI GGWCC 5 cut(s) 27, 431, 548, 1029, 1034
XapI RAATTY 2 cut(s) 325, 444
XbaI TCTAGA 1 cut(s) 817
XceI RCATGY 1 cut(s) 1618
XmnI GAANNNNTTC 1 cut(s) 986
XspI CTAG 4 cut(s) 692, 818, 1391, 1527
Zsp2I ATGCAT 2 cut(s) 523, 1694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.