TFIIS helical bundle-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g50290 FvH4_6g50290 FvH4_6g50290 FvH4_6g50290 FvH4_6g50290 |
| malus_domestica | MD09G1037500.v1.1 MD17G1038800.v1.1 |
| prunus_persica | Prupe.3G280200_v2.0.a1 Prupe.3G280200_v2.0.a1 |
| pyrus_communis | pycom111g03010 pycom17g03500 |
| rosa_chinensis | RchiOBHm_Chr2g0170611 |
| rosa_laevigata | RLG00000021968 |
| rosa_multiflora | Rmu_sc0003787.1_g000033 Rmu_sc0010307.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00081180 |
| rosa_rugosa | Rorug02G0549700 |
| rosa_samantha | Rh2AG622000 Rh2BG633300 Rh2CG602600 Rh2DG646100 |
| rosa_wichuraiana | Rw2G051570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 2580, 4113 |
| Acc36I | ACCTGC | 7 cut(s) | 265, 349, 649, 712, 2580, 3592, 4113 |
| Acc65I | GGTACC | 1 cut(s) | 1922 |
| AccB1I | GGYRCC | 2 cut(s) | 1514, 1922 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1901, 2582 |
| AccBSI | CCGCTC | 2 cut(s) | 2489, 3364 |
| AccI | GTMKAC | 1 cut(s) | 1733 |
| AclI | AACGTT | 2 cut(s) | 718, 1508 |
| AclWI | GGATC | 8 cut(s) | 1264, 1456, 1940, 2086, 2797, 3386, 3565, 3757 |
| AcoI | YGGCCR | 2 cut(s) | 889, 3492 |
| AcsI | RAATTY | 9 cut(s) | 129, 1058, 1234, 1498, 1680, 1792, 2317, 2392, 2647 |
| AcuI | CTGAAG | 8 cut(s) | 387, 1284, 1509, 1866, 2112, 2718, 2805, 2892 |
| AdeI | CACNNNGTG | 1 cut(s) | 2300 |
| AfaI | GTAC | 6 cut(s) | 954, 1780, 1924, 2857, 3535, 4012 |
| AflIII | ACRYGT | 3 cut(s) | 42, 1216, 3088 |
| AgeI | ACCGGT | 1 cut(s) | 3256 |
| AjiI | CACGTC | 1 cut(s) | 2525 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 866, 898 |
| AleI | CACNNNNGTG | 1 cut(s) | 2013 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1606, 1638 |
| Alw21I | GWGCWC | 4 cut(s) | 151, 1084, 1652, 4366 |
| Alw44I | GTGCAC | 2 cut(s) | 147, 1080 |
| AlwI | GGATC | 8 cut(s) | 1264, 1456, 1940, 2086, 2797, 3386, 3565, 3757 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 923, 2882 |
| Ama87I | CYCGRG | 2 cut(s) | 1927, 4429 |
| ApaI | GGGCCC | 1 cut(s) | 4319 |
| ApaLI | GTGCAC | 2 cut(s) | 147, 1080 |
| ApoI | RAATTY | 9 cut(s) | 129, 1058, 1234, 1498, 1680, 1792, 2317, 2392, 2647 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 114, 146, 3257, 3289 |
| AseI | ATTAAT | 1 cut(s) | 486 |
| AsiGI | ACCGGT | 1 cut(s) | 3256 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3723 |
| Asp718I | GGTACC | 1 cut(s) | 1922 |
| AspLEI | GCGC | 1 cut(s) | 1114 |
| AsuC2I | CCSGG | 2 cut(s) | 3864, 4522 |
| AsuHPI | GGTGA | 9 cut(s) | 1028, 1434, 2150, 2159, 2286, 2361, 2729, 3267, 3551 |
| AsuII | TTCGAA | 2 cut(s) | 2972, 3263 |
| AsuNHI | GCTAGC | 2 cut(s) | 2323, 2327 |
| AvaI | CYCGRG | 2 cut(s) | 1927, 4429 |
| AvaII | GGWCC | 4 cut(s) | 1492, 4199, 4400, 4604 |
| AxyI | CCTNAGG | 1 cut(s) | 1741 |
| BaeGI | GKGCMC | 4 cut(s) | 151, 1084, 1854, 4319 |
| BanI | GGYRCC | 2 cut(s) | 1514, 1922 |
| BanII | GRGCYC | 4 cut(s) | 698, 1652, 3767, 4319 |
| BauI | CACGAG | 2 cut(s) | 1917, 3753 |
| BbsI | GAAGAC | 1 cut(s) | 3438 |
| Bbv12I | GWGCWC | 4 cut(s) | 151, 1084, 1652, 4366 |
| BbvCI | CCTCAGC | 1 cut(s) | 1053 |
| BceAI | ACGGC | 1 cut(s) | 18 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 537, 571, 1632, 1666 |
| BciVI | GTATCC | 2 cut(s) | 1837, 3205 |
| BclI | TGATCA | 2 cut(s) | 1603, 3700 |
| BcnI | CCSGG | 2 cut(s) | 3864, 4522 |
| BfmI | CTRYAG | 8 cut(s) | 75, 1115, 2112, 3216, 3480, 3585, 4210, 4533 |
| BfuAI | ACCTGC | 7 cut(s) | 265, 349, 649, 712, 2580, 3592, 4113 |
| BfuI | GTATCC | 2 cut(s) | 1837, 3205 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4714 |
| BglII | AGATCT | 1 cut(s) | 1528 |
| Bme18I | GGWCC | 4 cut(s) | 1492, 4199, 4400, 4604 |
| BmeT110I | CYCGRG | 2 cut(s) | 1927, 4429 |
| BmgBI | CACGTC | 1 cut(s) | 2525 |
| BmrI | ACTGGG | 3 cut(s) | 2456, 4449, 4587 |
| BmtI | GCTAGC | 2 cut(s) | 2327, 2331 |
| BmuI | ACTGGG | 3 cut(s) | 2456, 4449, 4587 |
| BpiI | GAAGAC | 1 cut(s) | 3438 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1900, 1932, 2380, 2412 |
| BpmI | CTGGAG | 6 cut(s) | 1106, 2361, 3789, 3898, 4059, 4548 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1053, 3207 |
| Bpu14I | TTCGAA | 2 cut(s) | 2972, 3263 |
| BpuEI | CTTGAG | 2 cut(s) | 1471, 2716 |
| BpuMI | CCSGG | 2 cut(s) | 3864, 4522 |
| BsaI | GGTCTC | 4 cut(s) | 289, 1968, 4161, 4426 |
| BsaJI | CCNNGG | 9 cut(s) | 165, 940, 1854, 1864, 1926, 2384, 3375, 4117, 4277 |
| BsaWI | WCCGGW | 5 cut(s) | 3131, 3163, 3256, 3881, 4606 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1407, 1437, 3523, 3553 |
| Bse118I | RCCGGY | 3 cut(s) | 1875, 3256, 3490 |
| Bse21I | CCTNAGG | 1 cut(s) | 1741 |
| Bse3DI | GCAATG | 3 cut(s) | 1723, 2107, 2531 |
| BseDI | CCNNGG | 9 cut(s) | 165, 940, 1854, 1864, 1926, 2384, 3375, 4117, 4277 |
| BseMI | GCAATG | 3 cut(s) | 1723, 2107, 2531 |
| BseRI | GAGGAG | 4 cut(s) | 699, 1383, 1956, 3374 |
| BseSI | GKGCMC | 4 cut(s) | 151, 1084, 1854, 4319 |
| BseYI | CCCAGC | 3 cut(s) | 2512, 3981, 4151 |
| BsgI | GTGCAG | 3 cut(s) | 445, 572, 3126 |
| BshNI | GGYRCC | 2 cut(s) | 1514, 1922 |
| BshTI | ACCGGT | 1 cut(s) | 3256 |
| BsiHKAI | GWGCWC | 4 cut(s) | 151, 1084, 1652, 4366 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1927, 4429 |
| BslFI | GGGAC | 5 cut(s) | 38, 1505, 3494, 4088, 4413 |
| BsmBI | CGTCTC | 1 cut(s) | 3347 |
| BsmFI | GGGAC | 5 cut(s) | 38, 1505, 3494, 4088, 4413 |
| BsmI | GAATGC | 4 cut(s) | 374, 903, 2248, 3575 |
| Bso31I | GGTCTC | 4 cut(s) | 289, 1968, 4161, 4426 |
| BsoBI | CYCGRG | 2 cut(s) | 1927, 4429 |
| Bsp119I | TTCGAA | 2 cut(s) | 2972, 3263 |
| Bsp120I | GGGCCC | 1 cut(s) | 4315 |
| Bsp1286I | GDGCHC | 8 cut(s) | 151, 698, 1084, 1652, 1854, 3767, 4319, 4366 |
| Bsp1407I | TGTACA | 1 cut(s) | 952 |
| Bsp19I | CCATGG | 2 cut(s) | 1854, 1864 |
| BspHI | TCATGA | 1 cut(s) | 2803 |
| BspMAI | CTGCAG | 2 cut(s) | 1119, 3589 |
| BspMI | ACCTGC | 7 cut(s) | 265, 349, 649, 712, 2580, 3592, 4113 |
| BspOI | GCTAGC | 2 cut(s) | 2327, 2331 |
| BspPI | GGATC | 8 cut(s) | 1264, 1456, 1940, 2086, 2797, 3386, 3565, 3757 |
| BspT104I | TTCGAA | 2 cut(s) | 2972, 3263 |
| BspT107I | GGYRCC | 2 cut(s) | 1514, 1922 |
| BspTNI | GGTCTC | 4 cut(s) | 289, 1968, 4161, 4426 |
| BsrBI | CCGCTC | 2 cut(s) | 2489, 3364 |
| BsrDI | GCAATG | 3 cut(s) | 1723, 2107, 2531 |
| BsrFI | RCCGGY | 3 cut(s) | 1875, 3256, 3490 |
| BsrGI | TGTACA | 1 cut(s) | 952 |
| BssAI | RCCGGY | 3 cut(s) | 1875, 3256, 3490 |
| BssECI | CCNNGG | 9 cut(s) | 165, 940, 1854, 1864, 1926, 2384, 3375, 4117, 4277 |
| BssSI | CACGAG | 2 cut(s) | 1917, 3753 |
| BssT1I | CCWWGG | 3 cut(s) | 940, 1854, 1864 |
| Bst2BI | CACGAG | 2 cut(s) | 1917, 3753 |
| Bst6I | CTCTTC | 2 cut(s) | 3038, 4646 |
| BstAUI | TGTACA | 1 cut(s) | 952 |
| BstBI | TTCGAA | 2 cut(s) | 2972, 3263 |
| BstC8I | GCNNGC | 7 cut(s) | 15, 889, 1293, 1675, 2325, 2329, 2944 |
| BstDSI | CCRYGG | 2 cut(s) | 1854, 1864 |
| BstEII | GGTNACC | 1 cut(s) | 4560 |
| BstHHI | GCGC | 1 cut(s) | 1114 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 10, 46, 863, 1288, 1572, 2171, 2333, 4714 |
| BstNSI | RCATGY | 3 cut(s) | 46, 1295, 3092 |
| BstPI | GGTNACC | 1 cut(s) | 4560 |
| BstSFI | CTRYAG | 8 cut(s) | 75, 1115, 2112, 3216, 3480, 3585, 4210, 4533 |
| BstSLI | GKGCMC | 4 cut(s) | 151, 1084, 1854, 4319 |
| BstV2I | GAAGAC | 1 cut(s) | 3438 |
| BstX2I | RGATCY | 7 cut(s) | 1256, 1528, 1945, 2789, 3391, 3557, 3749 |
| BstYI | RGATCY | 7 cut(s) | 1256, 1528, 1945, 2789, 3391, 3557, 3749 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1741 |
| BsuI | GTATCC | 2 cut(s) | 1837, 3205 |
| BtgI | CCRYGG | 2 cut(s) | 1854, 1864 |
| BtrI | CACGTC | 1 cut(s) | 2525 |
| BtsI | GCAGTG | 3 cut(s) | 555, 2524, 3138 |
| BveI | ACCTGC | 7 cut(s) | 265, 349, 649, 712, 2580, 3592, 4113 |
| Cac8I | GCNNGC | 7 cut(s) | 15, 889, 1293, 1675, 2325, 2329, 2944 |
| CaiI | CAGNNNCTG | 2 cut(s) | 923, 2882 |
| CciI | TCATGA | 1 cut(s) | 2803 |
| CfoI | GCGC | 1 cut(s) | 1114 |
| Cfr10I | RCCGGY | 3 cut(s) | 1875, 3256, 3490 |
| CseI | GACGC | 2 cut(s) | 132, 2738 |
| CsiI | ACCWGGT | 1 cut(s) | 4402 |
| Csp6I | GTAC | 6 cut(s) | 953, 1779, 1923, 2856, 3534, 4011 |
| CspAI | ACCGGT | 1 cut(s) | 3256 |
| CviQI | GTAC | 6 cut(s) | 953, 1779, 1923, 2856, 3534, 4011 |
| DraI | TTTAAA | 3 cut(s) | 2961, 3930, 3990 |
| DraIII | CACNNNGTG | 1 cut(s) | 2300 |
| EaeI | YGGCCR | 2 cut(s) | 889, 3492 |
| Eam1104I | CTCTTC | 2 cut(s) | 3038, 4646 |
| EarI | CTCTTC | 2 cut(s) | 3038, 4646 |
| EciI | GGCGGA | 1 cut(s) | 3656 |
| Ecl136II | GAGCTC | 1 cut(s) | 1650 |
| Eco130I | CCWWGG | 3 cut(s) | 940, 1854, 1864 |
| Eco147I | AGGCCT | 1 cut(s) | 3945 |
| Eco24I | GRGCYC | 4 cut(s) | 698, 1652, 3767, 4319 |
| Eco31I | GGTCTC | 4 cut(s) | 289, 1968, 4161, 4426 |
| Eco32I | GATATC | 1 cut(s) | 411 |
| Eco47I | GGWCC | 4 cut(s) | 1492, 4199, 4400, 4604 |
| Eco53kI | GAGCTC | 1 cut(s) | 1650 |
| Eco57I | CTGAAG | 8 cut(s) | 387, 1284, 1509, 1866, 2112, 2718, 2805, 2892 |
| Eco81I | CCTNAGG | 1 cut(s) | 1741 |
| Eco88I | CYCGRG | 2 cut(s) | 1927, 4429 |
| Eco91I | GGTNACC | 1 cut(s) | 4560 |
| EcoICRI | GAGCTC | 1 cut(s) | 1650 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4316, 4400 |
| EcoO65I | GGTNACC | 1 cut(s) | 4560 |
| EcoRI | GAATTC | 1 cut(s) | 2392 |
| EcoRV | GATATC | 1 cut(s) | 411 |
| EcoT14I | CCWWGG | 3 cut(s) | 940, 1854, 1864 |
| EcoT22I | ATGCAT | 4 cut(s) | 6, 543, 1297, 2062 |
| EcoT38I | GRGCYC | 4 cut(s) | 698, 1652, 3767, 4319 |
| ErhI | CCWWGG | 3 cut(s) | 940, 1854, 1864 |
| Esp3I | CGTCTC | 1 cut(s) | 3347 |
| FaqI | GGGAC | 5 cut(s) | 38, 1505, 3494, 4088, 4413 |
| FauI | CCCGC | 2 cut(s) | 2612, 4113 |
| FauNDI | CATATG | 1 cut(s) | 2218 |
| FbaI | TGATCA | 2 cut(s) | 1603, 3700 |
| FblI | GTMKAC | 1 cut(s) | 1733 |
| FriOI | GRGCYC | 4 cut(s) | 698, 1652, 3767, 4319 |
| GlaI | GCGC | 1 cut(s) | 1113 |
| GsaI | CCCAGC | 3 cut(s) | 2516, 3985, 4155 |
| GsuI | CTGGAG | 6 cut(s) | 1106, 2361, 3789, 3898, 4059, 4548 |
| HgaI | GACGC | 2 cut(s) | 132, 2738 |
| HhaI | GCGC | 1 cut(s) | 1114 |
| Hin6I | GCGC | 1 cut(s) | 1112 |
| HinP1I | GCGC | 1 cut(s) | 1112 |
| HincII | GTYRAC | 6 cut(s) | 468, 1861, 1954, 2050, 2477, 3907 |
| HindII | GTYRAC | 6 cut(s) | 468, 1861, 1954, 2050, 2477, 3907 |
| HindIII | AAGCTT | 3 cut(s) | 269, 1773, 1838 |
| HpaI | GTTAAC | 3 cut(s) | 468, 1954, 2050 |
| HphI | GGTGA | 9 cut(s) | 1028, 1434, 2150, 2159, 2286, 2361, 2729, 3267, 3551 |
| Hpy99I | CGWCG | 2 cut(s) | 39, 3014 |
| HpyCH4IV | ACGT | 5 cut(s) | 223, 718, 1216, 1508, 2524 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 10, 46, 863, 1288, 1572, 2171, 2333, 4714 |
| HpySE526I | ACGT | 5 cut(s) | 223, 718, 1216, 1508, 2524 |
| HspAI | GCGC | 1 cut(s) | 1112 |
| KpnI | GGTACC | 1 cut(s) | 1926 |
| Ksp22I | TGATCA | 2 cut(s) | 1603, 3700 |
| KspAI | GTTAAC | 3 cut(s) | 468, 1954, 2050 |
| MabI | ACCWGGT | 1 cut(s) | 4402 |
| MaeII | ACGT | 5 cut(s) | 223, 718, 1216, 1508, 2524 |
| MbiI | CCGCTC | 2 cut(s) | 2489, 3364 |
| MfeI | CAATTG | 2 cut(s) | 451, 2936 |
| MflI | RGATCY | 7 cut(s) | 1256, 1528, 1945, 2789, 3391, 3557, 3749 |
| MhlI | GDGCHC | 8 cut(s) | 151, 698, 1084, 1652, 1854, 3767, 4319, 4366 |
| MlyI | GAGTC | 7 cut(s) | 752, 1918, 2522, 2729, 3281, 3814, 3905 |
| MmeI | TCCRAC | 7 cut(s) | 87, 108, 868, 912, 957, 3604, 3825 |
| Mph1103I | ATGCAT | 4 cut(s) | 6, 543, 1297, 2062 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3723 |
| MslI | CAYNNNNRTG | 5 cut(s) | 330, 421, 2013, 2614, 2752 |
| MspA1I | CMGCKG | 3 cut(s) | 17, 1052, 2633 |
| MunI | CAATTG | 2 cut(s) | 451, 2936 |
| Mva1269I | GAATGC | 4 cut(s) | 374, 903, 2248, 3575 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 10, 46, 863, 1288, 1572, 2171, 2333, 4714 |
| NciI | CCSGG | 2 cut(s) | 3864, 4522 |
| NcoI | CCATGG | 2 cut(s) | 1854, 1864 |
| NdeI | CATATG | 1 cut(s) | 2218 |
| NheI | GCTAGC | 2 cut(s) | 2323, 2327 |
| NmeAIII | GCCGAG | 1 cut(s) | 3356 |
| NmuCI | GTSAC | 6 cut(s) | 2194, 2367, 2525, 2726, 3134, 3273 |
| NsiI | ATGCAT | 4 cut(s) | 6, 543, 1297, 2062 |
| NspI | RCATGY | 3 cut(s) | 46, 1295, 3092 |
| NspV | TTCGAA | 2 cut(s) | 2972, 3263 |
| OliI | CACNNNNGTG | 1 cut(s) | 2013 |
| PaeI | GCATGC | 1 cut(s) | 1295 |
| PagI | TCATGA | 1 cut(s) | 2803 |
| PaqCI | CACCTGC | 2 cut(s) | 2580, 4113 |
| PceI | AGGCCT | 1 cut(s) | 3945 |
| PciI | ACATGT | 2 cut(s) | 42, 3088 |
| PctI | GAATGC | 4 cut(s) | 374, 903, 2248, 3575 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3723 |
| PfeI | GAWTC | 9 cut(s) | 104, 170, 1102, 1757, 2969, 3018, 3029, 3344, 4346 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1901, 2582 |
| PfoI | TCCNGGA | 2 cut(s) | 3394, 4075 |
| PinAI | ACCGGT | 1 cut(s) | 3256 |
| PleI | GAGTC | 7 cut(s) | 751, 1917, 2522, 2728, 3280, 3813, 3905 |
| PpsI | GAGTC | 7 cut(s) | 751, 1917, 2522, 2728, 3280, 3813, 3905 |
| PpuMI | RGGWCCY | 1 cut(s) | 4400 |
| PscI | ACATGT | 2 cut(s) | 42, 3088 |
| PshBI | ATTAAT | 1 cut(s) | 486 |
| Psp124BI | GAGCTC | 1 cut(s) | 1652 |
| Psp1406I | AACGTT | 2 cut(s) | 718, 1508 |
| Psp5II | RGGWCCY | 1 cut(s) | 4400 |
| PspEI | GGTNACC | 1 cut(s) | 4560 |
| PspFI | CCCAGC | 3 cut(s) | 2512, 3981, 4151 |
| PspOMI | GGGCCC | 1 cut(s) | 4315 |
| PspPPI | RGGWCCY | 1 cut(s) | 4400 |
| PstI | CTGCAG | 2 cut(s) | 1119, 3589 |
| PstNI | CAGNNNCTG | 2 cut(s) | 923, 2882 |
| PsuI | RGATCY | 7 cut(s) | 1256, 1528, 1945, 2789, 3391, 3557, 3749 |
| PvuII | CAGCTG | 2 cut(s) | 17, 2633 |
| RsaI | GTAC | 6 cut(s) | 954, 1780, 1924, 2857, 3535, 4012 |
| RsaNI | GTAC | 6 cut(s) | 953, 1779, 1923, 2856, 3534, 4011 |
| RseI | CAYNNNNRTG | 5 cut(s) | 330, 421, 2013, 2614, 2752 |
| SacI | GAGCTC | 1 cut(s) | 1652 |
| SchI | GAGTC | 7 cut(s) | 752, 1918, 2522, 2729, 3281, 3814, 3905 |
| SduI | GDGCHC | 8 cut(s) | 151, 698, 1084, 1652, 1854, 3767, 4319, 4366 |
| SexAI | ACCWGGT | 1 cut(s) | 4402 |
| SfcI | CTRYAG | 8 cut(s) | 75, 1115, 2112, 3216, 3480, 3585, 4210, 4533 |
| SfuI | TTCGAA | 2 cut(s) | 2972, 3263 |
| SinI | GGWCC | 4 cut(s) | 1492, 4199, 4400, 4604 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 330, 421, 2013, 2614, 2752 |
| SmlI | CTYRAG | 2 cut(s) | 1486, 2695 |
| SmoI | CTYRAG | 2 cut(s) | 1486, 2695 |
| SphI | GCATGC | 1 cut(s) | 1295 |
| SseBI | AGGCCT | 1 cut(s) | 3945 |
| SspI | AATATT | 1 cut(s) | 207 |
| SstI | GAGCTC | 1 cut(s) | 1652 |
| StuI | AGGCCT | 1 cut(s) | 3945 |
| StyI | CCWWGG | 3 cut(s) | 940, 1854, 1864 |
| TaiI | ACGT | 5 cut(s) | 226, 721, 1219, 1511, 2527 |
| TaqI | TCGA | 7 cut(s) | 26, 253, 2972, 3012, 3263, 3924, 4690 |
| TatI | WGTACW | 2 cut(s) | 952, 2855 |
| TauI | GCSGC | 3 cut(s) | 3367, 3823, 4006 |
| TfiI | GAWTC | 9 cut(s) | 104, 170, 1102, 1757, 2969, 3018, 3029, 3344, 4346 |
| TseFI | GTSAC | 6 cut(s) | 2194, 2367, 2525, 2726, 3134, 3273 |
| Tsp45I | GTSAC | 6 cut(s) | 2194, 2367, 2525, 2726, 3134, 3273 |
| TspGWI | ACGGA | 5 cut(s) | 351, 579, 3371, 3641, 4561 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1901, 2582 |
| VneI | GTGCAC | 2 cut(s) | 147, 1080 |
| VpaK11BI | GGWCC | 4 cut(s) | 1492, 4199, 4400, 4604 |
| VspI | ATTAAT | 1 cut(s) | 486 |
| XapI | RAATTY | 9 cut(s) | 129, 1058, 1234, 1498, 1680, 1792, 2317, 2392, 2647 |
| XceI | RCATGY | 3 cut(s) | 46, 1295, 3092 |
| XmiI | GTMKAC | 1 cut(s) | 1733 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3723 |
| Zsp2I | ATGCAT | 4 cut(s) | 6, 543, 1297, 2062 |