TFIIS helical bundle-like domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g50290 FvH4_6g50290 FvH4_6g50290 FvH4_6g50290 FvH4_6g50290 |
| malus_domestica | MD09G1037500.v1.1 MD17G1038800.v1.1 |
| prunus_persica | Prupe.3G280200_v2.0.a1 Prupe.3G280200_v2.0.a1 |
| pyrus_communis | pycom111g03010 pycom17g03500 |
| rosa_chinensis | RchiOBHm_Chr2g0170611 |
| rosa_laevigata | RLG00000021968 |
| rosa_multiflora | Rmu_sc0003787.1_g000033 Rmu_sc0010307.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00081180 |
| rosa_rugosa | Rorug02G0549700 |
| rosa_samantha | Rh2AG622000 Rh2BG633300 Rh2CG602600 Rh2DG646100 |
| rosa_wichuraiana | Rw2G051570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 4450 |
| Acc16I | TGCGCA | 1 cut(s) | 3285 |
| Acc36I | ACCTGC | 6 cut(s) | 265, 349, 3011, 3203, 3760, 4450 |
| AccB1I | GGYRCC | 1 cut(s) | 1922 |
| AccI | GTMKAC | 2 cut(s) | 816, 2999 |
| AccII | CGCG | 2 cut(s) | 1080, 3656 |
| AccIII | TCCGGA | 1 cut(s) | 4754 |
| AciI | CCGC | 6 cut(s) | 176, 1511, 3341, 3697, 3835, 4086 |
| AclWI | GGATC | 8 cut(s) | 228, 1264, 1497, 1940, 2800, 3554, 4249, 4262 |
| AcoI | YGGCCR | 3 cut(s) | 889, 4143, 4306 |
| AcyI | GRCGYC | 2 cut(s) | 34, 4199 |
| AdeI | CACNNNGTG | 2 cut(s) | 2300, 3788 |
| AfaI | GTAC | 6 cut(s) | 954, 1780, 2038, 2219, 2287, 2938 |
| AfeI | AGCGCT | 1 cut(s) | 3742 |
| AflIII | ACRYGT | 4 cut(s) | 42, 1216, 3169, 3910 |
| AjiI | CACGTC | 1 cut(s) | 2710 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 866, 898 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1552, 1584 |
| Alw21I | GWGCWC | 3 cut(s) | 151, 1652, 4505 |
| Alw26I | GTCTC | 7 cut(s) | 289, 1486, 1584, 3221, 3939, 4194, 4210 |
| Alw44I | GTGCAC | 1 cut(s) | 147 |
| AlwI | GGATC | 8 cut(s) | 228, 1264, 1497, 1940, 2800, 3554, 4249, 4262 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3479, 3647 |
| Aor13HI | TCCGGA | 1 cut(s) | 4754 |
| Aor51HI | AGCGCT | 1 cut(s) | 3742 |
| ApaLI | GTGCAC | 1 cut(s) | 147 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 114, 146 |
| AseI | ATTAAT | 1 cut(s) | 486 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1336, 3103, 3307 |
| AspLEI | GCGC | 6 cut(s) | 98, 1082, 3286, 3658, 3743, 3950 |
| AsuC2I | CCSGG | 6 cut(s) | 2624, 2965, 4310, 4400, 4641, 4708 |
| AsuNHI | GCTAGC | 1 cut(s) | 2323 |
| AvaII | GGWCC | 5 cut(s) | 587, 3402, 4328, 4385, 4586 |
| AxyI | CCTNAGG | 2 cut(s) | 165, 1927 |
| BaeGI | GKGCMC | 1 cut(s) | 151 |
| BalI | TGGCCA | 1 cut(s) | 4145 |
| BamHI | GGATCC | 1 cut(s) | 4254 |
| BanI | GGYRCC | 1 cut(s) | 1922 |
| BanII | GRGCYC | 3 cut(s) | 698, 1652, 4505 |
| BauI | CACGAG | 1 cut(s) | 3936 |
| BbsI | GAAGAC | 4 cut(s) | 1422, 1725, 2868, 4050 |
| Bbv12I | GWGCWC | 3 cut(s) | 151, 1652, 4505 |
| BbvCI | CCTCAGC | 1 cut(s) | 3024 |
| BceAI | ACGGC | 3 cut(s) | 47, 902, 2919 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 537, 571 |
| BciVI | GTATCC | 1 cut(s) | 3460 |
| BclI | TGATCA | 2 cut(s) | 1603, 3868 |
| BcnI | CCSGG | 6 cut(s) | 2624, 2965, 4310, 4400, 4641, 4708 |
| BcoDI | GTCTC | 7 cut(s) | 289, 1486, 1584, 3221, 3939, 4194, 4210 |
| BfaI | CTAG | 9 cut(s) | 93, 290, 533, 1188, 1572, 2118, 2324, 2328, 2763 |
| BfmI | CTRYAG | 9 cut(s) | 1971, 2925, 3210, 3648, 3729, 3753, 4332, 4425, 4719 |
| BfoI | RGCGCY | 2 cut(s) | 3744, 3951 |
| BfuAI | ACCTGC | 6 cut(s) | 265, 349, 3011, 3203, 3760, 4450 |
| BfuI | GTATCC | 1 cut(s) | 3460 |
| BglII | AGATCT | 1 cut(s) | 1528 |
| Bme18I | GGWCC | 5 cut(s) | 587, 3402, 4328, 4385, 4586 |
| BmgBI | CACGTC | 1 cut(s) | 2710 |
| BmrI | ACTGGG | 2 cut(s) | 1779, 4773 |
| BmtI | GCTAGC | 1 cut(s) | 2327 |
| BmuI | ACTGGG | 2 cut(s) | 1779, 4773 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4202 |
| BpiI | GAAGAC | 4 cut(s) | 1422, 1725, 2868, 4050 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1334, 1366, 2380, 2412 |
| BpmI | CTGGAG | 6 cut(s) | 1842, 2361, 3972, 4084, 4245, 4734 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2004, 2406, 3024 |
| BpuMI | CCSGG | 6 cut(s) | 2624, 2965, 4310, 4400, 4641, 4708 |
| BsaAI | YACGTR | 1 cut(s) | 1154 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2061 |
| BsaHI | GRCGYC | 2 cut(s) | 34, 4199 |
| BsaI | GGTCTC | 3 cut(s) | 289, 3221, 3939 |
| BsaWI | WCCGGW | 2 cut(s) | 1875, 4754 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 798, 828, 1552, 1582, 3691, 3721 |
| Bse21I | CCTNAGG | 2 cut(s) | 165, 1927 |
| Bse3DI | GCAATG | 3 cut(s) | 1483, 1723, 2650 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2061 |
| BseAI | TCCGGA | 1 cut(s) | 4754 |
| BseJI | GATNNNNATC | 1 cut(s) | 2061 |
| BseMI | GCAATG | 3 cut(s) | 1483, 1723, 2650 |
| BseRI | GAGGAG | 2 cut(s) | 699, 3041 |
| BseSI | GKGCMC | 1 cut(s) | 151 |
| BseYI | CCCAGC | 2 cut(s) | 4167, 4337 |
| BsgI | GTGCAG | 3 cut(s) | 445, 572, 3891 |
| Bsh1236I | CGCG | 2 cut(s) | 1080, 3656 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3795 |
| BshNI | GGYRCC | 1 cut(s) | 1922 |
| BsiEI | CGRYCG | 1 cut(s) | 3795 |
| BsiHKAI | GWGCWC | 3 cut(s) | 151, 1652, 4505 |
| BsiSI | CCGG | 8 cut(s) | 1876, 2623, 2964, 4309, 4399, 4641, 4707, 4755 |
| BsiWI | CGTACG | 1 cut(s) | 2217 |
| BslFI | GGGAC | 6 cut(s) | 38, 3662, 4118, 4274, 4586, 4599 |
| BsmAI | GTCTC | 7 cut(s) | 289, 1486, 1584, 3221, 3939, 4194, 4210 |
| BsmFI | GGGAC | 6 cut(s) | 38, 3662, 4118, 4274, 4586, 4599 |
| BsmI | GAATGC | 5 cut(s) | 374, 903, 1288, 2248, 3466 |
| Bso31I | GGTCTC | 3 cut(s) | 289, 3221, 3939 |
| Bsp1286I | GDGCHC | 4 cut(s) | 151, 698, 1652, 4505 |
| Bsp13I | TCCGGA | 1 cut(s) | 4754 |
| Bsp1407I | TGTACA | 1 cut(s) | 952 |
| Bsp19I | CCATGG | 1 cut(s) | 1864 |
| BspACI | CCGC | 6 cut(s) | 176, 1511, 3341, 3697, 3835, 4086 |
| BspEI | TCCGGA | 1 cut(s) | 4754 |
| BspFNI | CGCG | 2 cut(s) | 1080, 3656 |
| BspHI | TCATGA | 1 cut(s) | 2806 |
| BspMAI | CTGCAG | 7 cut(s) | 1975, 3214, 3733, 3757, 4336, 4429, 4723 |
| BspMI | ACCTGC | 6 cut(s) | 265, 349, 3011, 3203, 3760, 4450 |
| BspOI | GCTAGC | 1 cut(s) | 2327 |
| BspPI | GGATC | 8 cut(s) | 228, 1264, 1497, 1940, 2800, 3554, 4249, 4262 |
| BspT107I | GGYRCC | 1 cut(s) | 1922 |
| BspTNI | GGTCTC | 3 cut(s) | 289, 3221, 3939 |
| BsrDI | GCAATG | 3 cut(s) | 1483, 1723, 2650 |
| BsrGI | TGTACA | 1 cut(s) | 952 |
| BssNI | GRCGYC | 2 cut(s) | 34, 4199 |
| BssSI | CACGAG | 1 cut(s) | 3936 |
| BssT1I | CCWWGG | 3 cut(s) | 1854, 1864, 3114 |
| Bst2BI | CACGAG | 1 cut(s) | 3936 |
| Bst6I | CTCTTC | 2 cut(s) | 3119, 4832 |
| BstACI | GRCGYC | 2 cut(s) | 34, 4199 |
| BstAUI | TGTACA | 1 cut(s) | 952 |
| BstBAI | YACGTR | 1 cut(s) | 1154 |
| BstC8I | GCNNGC | 9 cut(s) | 15, 786, 889, 2325, 2814, 2842, 3660, 4015, 4788 |
| BstDSI | CCRYGG | 1 cut(s) | 1864 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1917, 2484, 3663 |
| BstFNI | CGCG | 2 cut(s) | 1080, 3656 |
| BstH2I | RGCGCY | 2 cut(s) | 3744, 3951 |
| BstHHI | GCGC | 6 cut(s) | 98, 1082, 3286, 3658, 3743, 3950 |
| BstMAI | GTCTC | 7 cut(s) | 289, 1486, 1584, 3221, 3939, 4194, 4210 |
| BstMCI | CGRYCG | 1 cut(s) | 3795 |
| BstNSI | RCATGY | 7 cut(s) | 46, 2107, 2578, 2844, 3173, 3347, 3914 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4202 |
| BstSFI | CTRYAG | 9 cut(s) | 1971, 2925, 3210, 3648, 3729, 3753, 4332, 4425, 4719 |
| BstSLI | GKGCMC | 1 cut(s) | 151 |
| BstSNI | TACGTA | 1 cut(s) | 1154 |
| BstUI | CGCG | 2 cut(s) | 1080, 3656 |
| BstV2I | GAAGAC | 4 cut(s) | 1422, 1725, 2868, 4050 |
| BstX2I | RGATCY | 6 cut(s) | 1256, 1528, 1945, 2792, 3559, 4254 |
| BstYI | RGATCY | 6 cut(s) | 1256, 1528, 1945, 2792, 3559, 4254 |
| Bsu36I | CCTNAGG | 2 cut(s) | 165, 1927 |
| BsuI | GTATCC | 1 cut(s) | 3460 |
| BtgI | CCRYGG | 1 cut(s) | 1864 |
| BtgZI | GCGATG | 1 cut(s) | 1032 |
| BtrI | CACGTC | 1 cut(s) | 2710 |
| BtsI | GCAGTG | 4 cut(s) | 555, 1696, 4189, 4434 |
| BveI | ACCTGC | 6 cut(s) | 265, 349, 3011, 3203, 3760, 4450 |
| Cac8I | GCNNGC | 9 cut(s) | 15, 786, 889, 2325, 2814, 2842, 3660, 4015, 4788 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3479, 3647 |
| CciI | TCATGA | 1 cut(s) | 2806 |
| CfoI | GCGC | 6 cut(s) | 98, 1082, 3286, 3658, 3743, 3950 |
| CseI | GACGC | 4 cut(s) | 23, 132, 3453, 4207 |
| CsiI | ACCWGGT | 2 cut(s) | 2296, 4588 |
| Csp6I | GTAC | 6 cut(s) | 953, 1779, 2037, 2218, 2286, 2937 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 4539, 4574 |
| CviQI | GTAC | 6 cut(s) | 953, 1779, 2037, 2218, 2286, 2937 |
| DraI | TTTAAA | 2 cut(s) | 4116, 4176 |
| DraIII | CACNNNGTG | 2 cut(s) | 2300, 3788 |
| EaeI | YGGCCR | 3 cut(s) | 889, 4143, 4306 |
| Eam1104I | CTCTTC | 2 cut(s) | 3119, 4832 |
| EarI | CTCTTC | 2 cut(s) | 3119, 4832 |
| Ecl136II | GAGCTC | 2 cut(s) | 1650, 4503 |
| Eco105I | TACGTA | 1 cut(s) | 1154 |
| Eco130I | CCWWGG | 3 cut(s) | 1854, 1864, 3114 |
| Eco147I | AGGCCT | 1 cut(s) | 4131 |
| Eco24I | GRGCYC | 3 cut(s) | 698, 1652, 4505 |
| Eco31I | GGTCTC | 3 cut(s) | 289, 3221, 3939 |
| Eco32I | GATATC | 2 cut(s) | 411, 3997 |
| Eco47I | GGWCC | 5 cut(s) | 587, 3402, 4328, 4385, 4586 |
| Eco47III | AGCGCT | 1 cut(s) | 3742 |
| Eco53kI | GAGCTC | 2 cut(s) | 1650, 4503 |
| Eco81I | CCTNAGG | 2 cut(s) | 165, 1927 |
| EcoICRI | GAGCTC | 2 cut(s) | 1650, 4503 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1917, 2484, 3663 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2825 |
| EcoRI | GAATTC | 2 cut(s) | 2392, 3099 |
| EcoRV | GATATC | 2 cut(s) | 411, 3997 |
| EcoT14I | CCWWGG | 3 cut(s) | 1854, 1864, 3114 |
| EcoT22I | ATGCAT | 3 cut(s) | 6, 543, 4041 |
| EcoT38I | GRGCYC | 3 cut(s) | 698, 1652, 4505 |
| ErhI | CCWWGG | 3 cut(s) | 1854, 1864, 3114 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 795, 827, 3479, 3511, 4042, 4074 |
| FaqI | GGGAC | 6 cut(s) | 38, 3662, 4118, 4274, 4586, 4599 |
| FauI | CCCGC | 3 cut(s) | 183, 1504, 4079 |
| FauNDI | CATATG | 1 cut(s) | 4525 |
| FbaI | TGATCA | 2 cut(s) | 1603, 3868 |
| FblI | GTMKAC | 2 cut(s) | 816, 2999 |
| FriOI | GRGCYC | 3 cut(s) | 698, 1652, 4505 |
| FspBI | CTAG | 9 cut(s) | 93, 290, 533, 1188, 1572, 2118, 2324, 2328, 2763 |
| FspI | TGCGCA | 1 cut(s) | 3285 |
| GlaI | GCGC | 6 cut(s) | 97, 1081, 3285, 3657, 3742, 3949 |
| GsaI | CCCAGC | 2 cut(s) | 4171, 4341 |
| GsuI | CTGGAG | 6 cut(s) | 1842, 2361, 3972, 4084, 4245, 4734 |
| HaeII | RGCGCY | 2 cut(s) | 3744, 3951 |
| HapII | CCGG | 8 cut(s) | 1876, 2623, 2964, 4309, 4399, 4641, 4707, 4755 |
| HgaI | GACGC | 4 cut(s) | 23, 132, 3453, 4207 |
| HhaI | GCGC | 6 cut(s) | 98, 1082, 3286, 3658, 3743, 3950 |
| Hin1I | GRCGYC | 2 cut(s) | 34, 4199 |
| Hin6I | GCGC | 6 cut(s) | 96, 1080, 3284, 3656, 3741, 3948 |
| HinP1I | GCGC | 6 cut(s) | 96, 1080, 3284, 3656, 3741, 3948 |
| HincII | GTYRAC | 6 cut(s) | 468, 1449, 1861, 2477, 3536, 4749 |
| HindII | GTYRAC | 6 cut(s) | 468, 1449, 1861, 2477, 3536, 4749 |
| HindIII | AAGCTT | 1 cut(s) | 269 |
| HpaI | GTTAAC | 1 cut(s) | 468 |
| HpaII | CCGG | 8 cut(s) | 1876, 2623, 2964, 4309, 4399, 4641, 4707, 4755 |
| Hpy99I | CGWCG | 2 cut(s) | 39, 3469 |
| HpyCH4IV | ACGT | 3 cut(s) | 1153, 1216, 2709 |
| HpySE526I | ACGT | 3 cut(s) | 1153, 1216, 2709 |
| Hsp92I | GRCGYC | 2 cut(s) | 34, 4199 |
| HspAI | GCGC | 6 cut(s) | 96, 1080, 3284, 3656, 3741, 3948 |
| Kpn2I | TCCGGA | 1 cut(s) | 4754 |
| Ksp22I | TGATCA | 2 cut(s) | 1603, 3868 |
| KspAI | GTTAAC | 1 cut(s) | 468 |
| LmnI | GCTCC | 9 cut(s) | 993, 1560, 1647, 2240, 2931, 3382, 3627, 4508, 4715 |
| MabI | ACCWGGT | 2 cut(s) | 2296, 4588 |
| MaeI | CTAG | 9 cut(s) | 93, 290, 533, 1188, 1572, 2118, 2324, 2328, 2763 |
| MaeII | ACGT | 3 cut(s) | 1153, 1216, 2709 |
| MflI | RGATCY | 6 cut(s) | 1256, 1528, 1945, 2792, 3559, 4254 |
| MhlI | GDGCHC | 4 cut(s) | 151, 698, 1652, 4505 |
| MlsI | TGGCCA | 1 cut(s) | 4145 |
| MluNI | TGGCCA | 1 cut(s) | 4145 |
| MlyI | GAGTC | 9 cut(s) | 752, 837, 1609, 1792, 3119, 3185, 3359, 3997, 4091 |
| Mox20I | TGGCCA | 1 cut(s) | 4145 |
| Mph1103I | ATGCAT | 3 cut(s) | 6, 543, 4041 |
| MroI | TCCGGA | 1 cut(s) | 4754 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1336, 3103, 3307 |
| MscI | TGGCCA | 1 cut(s) | 4145 |
| MslI | CAYNNNNRTG | 4 cut(s) | 330, 421, 2638, 2755 |
| Msp20I | TGGCCA | 1 cut(s) | 4145 |
| MspA1I | CMGCKG | 5 cut(s) | 17, 1820, 3276, 4337, 4579 |
| MspI | CCGG | 8 cut(s) | 1876, 2623, 2964, 4309, 4399, 4641, 4707, 4755 |
| Mva1269I | GAATGC | 5 cut(s) | 374, 903, 1288, 2248, 3466 |
| MvnI | CGCG | 2 cut(s) | 1080, 3656 |
| NciI | CCSGG | 6 cut(s) | 2624, 2965, 4310, 4400, 4641, 4708 |
| NcoI | CCATGG | 1 cut(s) | 1864 |
| NdeI | CATATG | 1 cut(s) | 4525 |
| NheI | GCTAGC | 1 cut(s) | 2323 |
| NmeAIII | GCCGAG | 1 cut(s) | 4597 |
| NmuCI | GTSAC | 9 cut(s) | 140, 1157, 1672, 2367, 3059, 3317, 3351, 4002, 4341 |
| NsbI | TGCGCA | 1 cut(s) | 3285 |
| NsiI | ATGCAT | 3 cut(s) | 6, 543, 4041 |
| NspI | RCATGY | 7 cut(s) | 46, 2107, 2578, 2844, 3173, 3347, 3914 |
| PaeI | GCATGC | 1 cut(s) | 2844 |
| PagI | TCATGA | 1 cut(s) | 2806 |
| PaqCI | CACCTGC | 1 cut(s) | 4450 |
| PasI | CCCWGGG | 1 cut(s) | 2698 |
| PceI | AGGCCT | 1 cut(s) | 4131 |
| PciI | ACATGT | 3 cut(s) | 42, 3169, 3910 |
| PctI | GAATGC | 5 cut(s) | 374, 903, 1288, 2248, 3466 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1336, 3103, 3307 |
| Pfl23II | CGTACG | 1 cut(s) | 2217 |
| PfoI | TCCNGGA | 3 cut(s) | 2963, 3562, 4261 |
| PleI | GAGTC | 9 cut(s) | 751, 836, 1609, 1792, 3118, 3184, 3358, 3996, 4091 |
| PpsI | GAGTC | 9 cut(s) | 751, 836, 1609, 1792, 3118, 3184, 3358, 3996, 4091 |
| Ppu21I | YACGTR | 1 cut(s) | 1154 |
| PscI | ACATGT | 3 cut(s) | 42, 3169, 3910 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4202 |
| PshBI | ATTAAT | 1 cut(s) | 486 |
| Psp124BI | GAGCTC | 2 cut(s) | 1652, 4505 |
| PspFI | CCCAGC | 2 cut(s) | 4167, 4337 |
| PspLI | CGTACG | 1 cut(s) | 2217 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 936, 968 |
| PstI | CTGCAG | 7 cut(s) | 1975, 3214, 3733, 3757, 4336, 4429, 4723 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3479, 3647 |
| PsuI | RGATCY | 6 cut(s) | 1256, 1528, 1945, 2792, 3559, 4254 |
| PvuII | CAGCTG | 5 cut(s) | 17, 1820, 3276, 4337, 4579 |
| RsaI | GTAC | 6 cut(s) | 954, 1780, 2038, 2219, 2287, 2938 |
| RsaNI | GTAC | 6 cut(s) | 953, 1779, 2037, 2218, 2286, 2937 |
| RseI | CAYNNNNRTG | 4 cut(s) | 330, 421, 2638, 2755 |
| SacI | GAGCTC | 2 cut(s) | 1652, 4505 |
| SchI | GAGTC | 9 cut(s) | 752, 837, 1609, 1792, 3119, 3185, 3359, 3997, 4091 |
| SduI | GDGCHC | 4 cut(s) | 151, 698, 1652, 4505 |
| SexAI | ACCWGGT | 2 cut(s) | 2296, 4588 |
| SfcI | CTRYAG | 9 cut(s) | 1971, 2925, 3210, 3648, 3729, 3753, 4332, 4425, 4719 |
| SinI | GGWCC | 5 cut(s) | 587, 3402, 4328, 4385, 4586 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 330, 421, 2638, 2755 |
| SnaBI | TACGTA | 1 cut(s) | 1154 |
| SphI | GCATGC | 1 cut(s) | 2844 |
| SseBI | AGGCCT | 1 cut(s) | 4131 |
| SsiI | CCGC | 6 cut(s) | 176, 1511, 3341, 3697, 3835, 4086 |
| SspI | AATATT | 1 cut(s) | 2524 |
| SspMI | CTAG | 9 cut(s) | 93, 290, 533, 1188, 1572, 2118, 2324, 2328, 2763 |
| SstI | GAGCTC | 2 cut(s) | 1652, 4505 |
| StuI | AGGCCT | 1 cut(s) | 4131 |
| StyI | CCWWGG | 3 cut(s) | 1854, 1864, 3114 |
| TaiI | ACGT | 3 cut(s) | 1156, 1219, 2712 |
| TaqI | TCGA | 8 cut(s) | 26, 253, 507, 831, 1598, 3943, 4499, 4876 |
| TaqII | GACCGA | 1 cut(s) | 3809 |
| TatI | WGTACW | 2 cut(s) | 952, 2036 |
| TseFI | GTSAC | 9 cut(s) | 140, 1157, 1672, 2367, 3059, 3317, 3351, 4002, 4341 |
| Tsp45I | GTSAC | 9 cut(s) | 140, 1157, 1672, 2367, 3059, 3317, 3351, 4002, 4341 |
| TspGWI | ACGGA | 5 cut(s) | 351, 812, 3311, 4461, 4747 |
| VneI | GTGCAC | 1 cut(s) | 147 |
| VpaK11BI | GGWCC | 5 cut(s) | 587, 3402, 4328, 4385, 4586 |
| VspI | ATTAAT | 1 cut(s) | 486 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1917, 2484, 3663 |
| XceI | RCATGY | 7 cut(s) | 46, 2107, 2578, 2844, 3173, 3347, 3914 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1400 |
| XmiI | GTMKAC | 2 cut(s) | 816, 2999 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1336, 3103, 3307 |
| XspI | CTAG | 9 cut(s) | 93, 290, 533, 1188, 1572, 2118, 2324, 2328, 2763 |
| Zsp2I | ATGCAT | 3 cut(s) | 6, 543, 4041 |