Fanconi anaemia protein FancD2 nuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14970 AT4G14970 AT4G14970 AT4G14970 AT4G14970 AT4G14970 |
| fragaria_vesca | FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 |
| malus_domestica | MD09G1135500.v1.1 |
| prunus_persica | Prupe.3G191100_v2.0.a1 Prupe.3G191100_v2.0.a1 |
| pyrus_communis | pycom09g05650 |
| rosa_chinensis | RchiOBHm_Chr2g0154431 |
| rosa_laevigata | RLG00000020777 |
| rosa_multiflora | Rmu_sc0003808.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00094340 |
| rosa_rugosa | Rorug02G0444300 |
| rosa_samantha | Rh2AG508900 Rh2BG520100 Rh2CG494300 Rh2DG530500 |
| rosa_wichuraiana | Rw2G041780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2211 |
| AatII | GACGTC | 1 cut(s) | 516 |
| Acc16I | TGCGCA | 2 cut(s) | 3599, 3704 |
| Acc36I | ACCTGC | 4 cut(s) | 583, 1648, 2211, 2739 |
| AccB1I | GGYRCC | 2 cut(s) | 406, 2710 |
| AccI | GTMKAC | 2 cut(s) | 473, 1560 |
| AccII | CGCG | 1 cut(s) | 470 |
| AccIII | TCCGGA | 1 cut(s) | 882 |
| AclI | AACGTT | 1 cut(s) | 1871 |
| AclWI | GGATC | 8 cut(s) | 557, 646, 758, 771, 1095, 2167, 2236, 3340 |
| AcoI | YGGCCR | 3 cut(s) | 38, 576, 1573 |
| AcsI | RAATTY | 9 cut(s) | 426, 917, 1969, 2351, 2773, 2808, 3059, 3524, 4224 |
| AcuI | CTGAAG | 5 cut(s) | 689, 1730, 3381, 3926, 4343 |
| AcvI | CACGTG | 1 cut(s) | 1405 |
| AcyI | GRCGYC | 4 cut(s) | 132, 513, 3438, 3476 |
| AfeI | AGCGCT | 1 cut(s) | 2402 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 36, 226, 547, 760, 1149, 2373, 2886, 3032 |
| AflII | CTTAAG | 1 cut(s) | 2512 |
| AflIII | ACRYGT | 2 cut(s) | 468, 1921 |
| AjnI | CCWGG | 7 cut(s) | 1310, 1695, 2361, 2992, 3041, 3388, 3576 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 743, 775, 1793, 1825 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3789, 3821 |
| Alw21I | GWGCWC | 6 cut(s) | 738, 831, 1797, 2459, 3118, 3928 |
| Alw26I | GTCTC | 5 cut(s) | 169, 498, 1439, 2247, 2283 |
| Alw44I | GTGCAC | 1 cut(s) | 3114 |
| AlwI | GGATC | 8 cut(s) | 557, 646, 758, 771, 1095, 2167, 2236, 3340 |
| Ama87I | CYCGRG | 2 cut(s) | 443, 692 |
| Aor13HI | TCCGGA | 1 cut(s) | 882 |
| Aor51HI | AGCGCT | 1 cut(s) | 2402 |
| ApaLI | GTGCAC | 1 cut(s) | 3114 |
| ApoI | RAATTY | 9 cut(s) | 426, 917, 1969, 2351, 2773, 2808, 3059, 3524, 4224 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 498, 530, 1438, 1470, 2735, 2767 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3897, 3948 |
| AspLEI | GCGC | 4 cut(s) | 2403, 3419, 3600, 3705 |
| AspS9I | GGNCC | 5 cut(s) | 209, 229, 488, 1693, 3517 |
| AsuII | TTCGAA | 1 cut(s) | 749 |
| AsuNHI | GCTAGC | 2 cut(s) | 1459, 3751 |
| AvaI | CYCGRG | 2 cut(s) | 443, 692 |
| AvaII | GGWCC | 3 cut(s) | 229, 488, 3517 |
| BaeGI | GKGCMC | 2 cut(s) | 411, 3118 |
| BalI | TGGCCA | 1 cut(s) | 1575 |
| BamHI | GGATCC | 1 cut(s) | 763 |
| BanI | GGYRCC | 2 cut(s) | 406, 2710 |
| BanII | GRGCYC | 2 cut(s) | 1412, 1797 |
| BbrPI | CACGTG | 1 cut(s) | 1405 |
| BbsI | GAAGAC | 4 cut(s) | 513, 1013, 1808, 2079 |
| Bbv12I | GWGCWC | 6 cut(s) | 738, 831, 1797, 2459, 3118, 3928 |
| BceAI | ACGGC | 3 cut(s) | 53, 119, 199 |
| BciT130I | CCWGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| BciVI | GTATCC | 3 cut(s) | 2295, 3363, 4366 |
| BclI | TGATCA | 3 cut(s) | 525, 1213, 1842 |
| BcoDI | GTCTC | 5 cut(s) | 169, 498, 1439, 2247, 2283 |
| BfmI | CTRYAG | 2 cut(s) | 720, 3222 |
| BfoI | RGCGCY | 2 cut(s) | 2404, 3420 |
| BfrI | CTTAAG | 1 cut(s) | 2512 |
| BfuAI | ACCTGC | 4 cut(s) | 583, 1648, 2211, 2739 |
| BfuI | GTATCC | 3 cut(s) | 2295, 3363, 4366 |
| BglII | AGATCT | 1 cut(s) | 4241 |
| BmcAI | AGTACT | 2 cut(s) | 1283, 3126 |
| Bme1390I | CCNGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| Bme18I | GGWCC | 3 cut(s) | 229, 488, 3517 |
| BmeT110I | CYCGRG | 2 cut(s) | 443, 692 |
| BmgT120I | GGNCC | 5 cut(s) | 209, 229, 488, 1693, 3517 |
| BmiI | GGNNCC | 3 cut(s) | 408, 765, 2712 |
| BmrFI | CCNGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| BmrI | ACTGGG | 1 cut(s) | 2349 |
| BmsI | GCATC | 9 cut(s) | 579, 816, 994, 1107, 1723, 2167, 2824, 2911, 2915 |
| BmtI | GCTAGC | 2 cut(s) | 1463, 3755 |
| BmuI | ACTGGG | 1 cut(s) | 2349 |
| BpiI | GAAGAC | 4 cut(s) | 513, 1013, 1808, 2079 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 2441, 2473, 2443, 2475, 2564, 2596 |
| BpmI | CTGGAG | 2 cut(s) | 1811, 3012 |
| Bpu10I | CCTNAGC | 2 cut(s) | 845, 1083 |
| Bpu14I | TTCGAA | 1 cut(s) | 749 |
| BpuEI | CTTGAG | 7 cut(s) | 94, 944, 1030, 2425, 3040, 3085, 3677 |
| Bsa29I | ATCGAT | 3 cut(s) | 153, 1101, 2832 |
| BsaAI | YACGTR | 1 cut(s) | 1405 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3651, 4446 |
| BsaHI | GRCGYC | 4 cut(s) | 132, 513, 3438, 3476 |
| BsaI | GGTCTC | 2 cut(s) | 169, 1439 |
| BsaJI | CCNNGG | 8 cut(s) | 987, 1311, 1449, 2155, 2823, 3388, 3389, 4035 |
| BsaWI | WCCGGW | 3 cut(s) | 485, 540, 882 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 225, 255 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 36, 226, 547, 760, 1149, 2373, 2886, 3032 |
| Bse118I | RCCGGY | 2 cut(s) | 311, 730 |
| Bse1I | ACTGG | 4 cut(s) | 418, 1794, 2344, 3029 |
| Bse3DI | GCAATG | 2 cut(s) | 2078, 2817 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3651, 4446 |
| BseAI | TCCGGA | 1 cut(s) | 882 |
| BseBI | CCWGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| BseCI | ATCGAT | 3 cut(s) | 153, 1101, 2832 |
| BseDI | CCNNGG | 8 cut(s) | 987, 1311, 1449, 2155, 2823, 3388, 3389, 4035 |
| BseJI | GATNNNNATC | 2 cut(s) | 3651, 4446 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 36, 226, 547, 760, 1149, 2373, 2886, 3032 |
| BseMI | GCAATG | 2 cut(s) | 2078, 2817 |
| BseMII | CTCAG | 8 cut(s) | 1097, 2223, 2852, 2922, 3579, 3762, 4368, 4446 |
| BseNI | ACTGG | 4 cut(s) | 418, 1794, 2344, 3029 |
| BseRI | GAGGAG | 3 cut(s) | 185, 1364, 4487 |
| BseSI | GKGCMC | 2 cut(s) | 411, 3118 |
| BseX3I | CGGCCG | 1 cut(s) | 38 |
| BsgI | GTGCAG | 4 cut(s) | 172, 1535, 1623, 3742 |
| Bsh1236I | CGCG | 1 cut(s) | 470 |
| Bsh1285I | CGRYCG | 1 cut(s) | 41 |
| BshNI | GGYRCC | 2 cut(s) | 406, 2710 |
| BshVI | ATCGAT | 3 cut(s) | 153, 1101, 2832 |
| BsiEI | CGRYCG | 1 cut(s) | 41 |
| BsiHKAI | GWGCWC | 6 cut(s) | 738, 831, 1797, 2459, 3118, 3928 |
| BsiHKCI | CYCGRG | 2 cut(s) | 443, 692 |
| BsiSI | CCGG | 8 cut(s) | 207, 312, 486, 541, 647, 731, 883, 2653 |
| BslFI | GGGAC | 4 cut(s) | 484, 3406, 3558, 4084 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 36, 226, 547, 760, 1149, 2373, 2886, 3032 |
| BsmAI | GTCTC | 5 cut(s) | 169, 498, 1439, 2247, 2283 |
| BsmBI | CGTCTC | 2 cut(s) | 498, 2283 |
| BsmFI | GGGAC | 4 cut(s) | 484, 3406, 3558, 4084 |
| BsmI | GAATGC | 5 cut(s) | 574, 1194, 1221, 3329, 4393 |
| Bso31I | GGTCTC | 2 cut(s) | 169, 1439 |
| BsoBI | CYCGRG | 2 cut(s) | 443, 692 |
| Bsp119I | TTCGAA | 1 cut(s) | 749 |
| Bsp1286I | GDGCHC | 8 cut(s) | 411, 738, 831, 1412, 1797, 2459, 3118, 3928 |
| Bsp13I | TCCGGA | 1 cut(s) | 882 |
| Bsp1407I | TGTACA | 4 cut(s) | 1243, 2075, 2327, 3208 |
| Bsp19I | CCATGG | 1 cut(s) | 4035 |
| BspCNI | CTCAG | 8 cut(s) | 1096, 2224, 2851, 2923, 3578, 3763, 4369, 4447 |
| BspDI | ATCGAT | 3 cut(s) | 153, 1101, 2832 |
| BspEI | TCCGGA | 1 cut(s) | 882 |
| BspFNI | CGCG | 1 cut(s) | 470 |
| BspHI | TCATGA | 1 cut(s) | 4074 |
| BspLI | GGNNCC | 3 cut(s) | 408, 765, 2712 |
| BspMAI | CTGCAG | 1 cut(s) | 3226 |
| BspMI | ACCTGC | 4 cut(s) | 583, 1648, 2211, 2739 |
| BspOI | GCTAGC | 2 cut(s) | 1463, 3755 |
| BspPI | GGATC | 8 cut(s) | 557, 646, 758, 771, 1095, 2167, 2236, 3340 |
| BspQI | GCTCTTC | 2 cut(s) | 3591, 4281 |
| BspT104I | TTCGAA | 1 cut(s) | 749 |
| BspT107I | GGYRCC | 2 cut(s) | 406, 2710 |
| BspTI | CTTAAG | 1 cut(s) | 2512 |
| BspTNI | GGTCTC | 2 cut(s) | 169, 1439 |
| BsrDI | GCAATG | 2 cut(s) | 2078, 2817 |
| BsrFI | RCCGGY | 2 cut(s) | 311, 730 |
| BsrGI | TGTACA | 4 cut(s) | 1243, 2075, 2327, 3208 |
| BsrI | ACTGG | 4 cut(s) | 418, 1794, 2344, 3029 |
| BssAI | RCCGGY | 2 cut(s) | 311, 730 |
| BssECI | CCNNGG | 8 cut(s) | 987, 1311, 1449, 2155, 2823, 3388, 3389, 4035 |
| BssNAI | GTATAC | 1 cut(s) | 474 |
| BssNI | GRCGYC | 4 cut(s) | 132, 513, 3438, 3476 |
| BssT1I | CCWWGG | 4 cut(s) | 1449, 2155, 2823, 4035 |
| Bst1107I | GTATAC | 1 cut(s) | 474 |
| Bst2UI | CCWGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| Bst4CI | ACNGT | 7 cut(s) | 679, 1041, 1900, 3052, 3871, 3969, 4098 |
| Bst6I | CTCTTC | 7 cut(s) | 55, 277, 325, 2472, 3591, 3852, 4281 |
| BstACI | GRCGYC | 4 cut(s) | 132, 513, 3438, 3476 |
| BstAFI | CTTAAG | 1 cut(s) | 2512 |
| BstAUI | TGTACA | 4 cut(s) | 1243, 2075, 2327, 3208 |
| BstBAI | YACGTR | 1 cut(s) | 1405 |
| BstBI | TTCGAA | 1 cut(s) | 749 |
| BstDSI | CCRYGG | 1 cut(s) | 4035 |
| BstEII | GGTNACC | 1 cut(s) | 784 |
| BstFNI | CGCG | 1 cut(s) | 470 |
| BstH2I | RGCGCY | 2 cut(s) | 2404, 3420 |
| BstHHI | GCGC | 4 cut(s) | 2403, 3419, 3600, 3705 |
| BstMAI | GTCTC | 5 cut(s) | 169, 498, 1439, 2247, 2283 |
| BstMCI | CGRYCG | 1 cut(s) | 41 |
| BstNI | CCWGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| BstNSI | RCATGY | 8 cut(s) | 439, 835, 977, 1327, 1925, 3456, 3562, 4034 |
| BstPI | GGTNACC | 1 cut(s) | 784 |
| BstSCI | CCNGG | 7 cut(s) | 1310, 1695, 2361, 2992, 3041, 3388, 3576 |
| BstSFI | CTRYAG | 2 cut(s) | 720, 3222 |
| BstSLI | GKGCMC | 2 cut(s) | 411, 3118 |
| BstUI | CGCG | 1 cut(s) | 470 |
| BstV2I | GAAGAC | 4 cut(s) | 513, 1013, 1808, 2079 |
| BstX2I | RGATCY | 5 cut(s) | 763, 2159, 2228, 3345, 4241 |
| BstYI | RGATCY | 5 cut(s) | 763, 2159, 2228, 3345, 4241 |
| BstZ17I | GTATAC | 1 cut(s) | 474 |
| BstZI | CGGCCG | 1 cut(s) | 38 |
| Bsu15I | ATCGAT | 3 cut(s) | 153, 1101, 2832 |
| BsuI | GTATCC | 3 cut(s) | 2295, 3363, 4366 |
| BsuTUI | ATCGAT | 3 cut(s) | 153, 1101, 2832 |
| BtgI | CCRYGG | 1 cut(s) | 4035 |
| BtsI | GCAGTG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 3 cut(s) | 99, 1787, 3057 |
| BveI | ACCTGC | 4 cut(s) | 583, 1648, 2211, 2739 |
| CciI | TCATGA | 1 cut(s) | 4074 |
| CfoI | GCGC | 4 cut(s) | 2403, 3419, 3600, 3705 |
| Cfr10I | RCCGGY | 2 cut(s) | 311, 730 |
| Cfr13I | GGNCC | 5 cut(s) | 209, 229, 488, 1693, 3517 |
| ClaI | ATCGAT | 3 cut(s) | 153, 1101, 2832 |
| CpoI | CGGWCCG | 1 cut(s) | 488 |
| CseI | GACGC | 6 cut(s) | 140, 188, 1144, 2265, 3427, 3465 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2650, 2685 |
| CspI | CGGWCCG | 1 cut(s) | 488 |
| DraI | TTTAAA | 1 cut(s) | 3633 |
| EaeI | YGGCCR | 3 cut(s) | 38, 576, 1573 |
| EagI | CGGCCG | 1 cut(s) | 38 |
| Eam1104I | CTCTTC | 7 cut(s) | 55, 277, 325, 2472, 3591, 3852, 4281 |
| EarI | CTCTTC | 7 cut(s) | 55, 277, 325, 2472, 3591, 3852, 4281 |
| EciI | GGCGGA | 3 cut(s) | 46, 233, 380 |
| Ecl136II | GAGCTC | 1 cut(s) | 1795 |
| EclXI | CGGCCG | 1 cut(s) | 38 |
| Eco130I | CCWWGG | 4 cut(s) | 1449, 2155, 2823, 4035 |
| Eco24I | GRGCYC | 2 cut(s) | 1412, 1797 |
| Eco31I | GGTCTC | 2 cut(s) | 169, 1439 |
| Eco47I | GGWCC | 3 cut(s) | 229, 488, 3517 |
| Eco47III | AGCGCT | 1 cut(s) | 2402 |
| Eco52I | CGGCCG | 1 cut(s) | 38 |
| Eco53kI | GAGCTC | 1 cut(s) | 1795 |
| Eco57I | CTGAAG | 5 cut(s) | 689, 1730, 3381, 3926, 4343 |
| Eco72I | CACGTG | 1 cut(s) | 1405 |
| Eco88I | CYCGRG | 2 cut(s) | 443, 692 |
| Eco91I | GGTNACC | 1 cut(s) | 784 |
| EcoICRI | GAGCTC | 1 cut(s) | 1795 |
| EcoO65I | GGTNACC | 1 cut(s) | 784 |
| EcoRI | GAATTC | 1 cut(s) | 3059 |
| EcoRII | CCWGG | 7 cut(s) | 1310, 1695, 2361, 2992, 3041, 3388, 3576 |
| EcoT14I | CCWWGG | 4 cut(s) | 1449, 2155, 2823, 4035 |
| EcoT22I | ATGCAT | 4 cut(s) | 574, 809, 1223, 1329 |
| EcoT38I | GRGCYC | 2 cut(s) | 1412, 1797 |
| ErhI | CCWWGG | 4 cut(s) | 1449, 2155, 2823, 4035 |
| Esp3I | CGTCTC | 2 cut(s) | 498, 2283 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2148, 2180, 3885, 3917 |
| FaqI | GGGAC | 4 cut(s) | 484, 3406, 3558, 4084 |
| FauI | CCCGC | 2 cut(s) | 38, 219 |
| FauNDI | CATATG | 2 cut(s) | 2529, 2755 |
| FbaI | TGATCA | 3 cut(s) | 525, 1213, 1842 |
| FblI | GTMKAC | 2 cut(s) | 473, 1560 |
| FriOI | GRGCYC | 2 cut(s) | 1412, 1797 |
| FspI | TGCGCA | 2 cut(s) | 3599, 3704 |
| GlaI | GCGC | 4 cut(s) | 2402, 3418, 3599, 3704 |
| GsuI | CTGGAG | 2 cut(s) | 1811, 3012 |
| HaeII | RGCGCY | 2 cut(s) | 2404, 3420 |
| HapII | CCGG | 8 cut(s) | 207, 312, 486, 541, 647, 731, 883, 2653 |
| HgaI | GACGC | 6 cut(s) | 140, 188, 1144, 2265, 3427, 3465 |
| HhaI | GCGC | 4 cut(s) | 2403, 3419, 3600, 3705 |
| Hin1I | GRCGYC | 4 cut(s) | 132, 513, 3438, 3476 |
| Hin6I | GCGC | 4 cut(s) | 2401, 3417, 3598, 3703 |
| HinP1I | GCGC | 4 cut(s) | 2401, 3417, 3598, 3703 |
| HincII | GTYRAC | 2 cut(s) | 2148, 3997 |
| HindII | GTYRAC | 2 cut(s) | 2148, 3997 |
| HindIII | AAGCTT | 1 cut(s) | 449 |
| HpaI | GTTAAC | 1 cut(s) | 3997 |
| HpaII | CCGG | 8 cut(s) | 207, 312, 486, 541, 647, 731, 883, 2653 |
| Hpy99I | CGWCG | 6 cut(s) | 134, 140, 182, 515, 518, 1160 |
| HpyCH4III | ACNGT | 7 cut(s) | 679, 1041, 1900, 3052, 3871, 3969, 4098 |
| HpyCH4IV | ACGT | 4 cut(s) | 513, 1404, 1871, 2738 |
| HpySE526I | ACGT | 4 cut(s) | 513, 1404, 1871, 2738 |
| Hsp92I | GRCGYC | 4 cut(s) | 132, 513, 3438, 3476 |
| HspAI | GCGC | 4 cut(s) | 2401, 3417, 3598, 3703 |
| Kpn2I | TCCGGA | 1 cut(s) | 882 |
| KroI | GCCGGC | 1 cut(s) | 311 |
| KroNI | GCCGGC | 1 cut(s) | 313 |
| Ksp22I | TGATCA | 3 cut(s) | 525, 1213, 1842 |
| KspAI | GTTAAC | 1 cut(s) | 3997 |
| LguI | GCTCTTC | 2 cut(s) | 3591, 4281 |
| LmnI | GCTCC | 5 cut(s) | 246, 1152, 1300, 1792, 2008 |
| LweI | GCATC | 9 cut(s) | 579, 816, 994, 1107, 1723, 2167, 2824, 2911, 2915 |
| MaeII | ACGT | 4 cut(s) | 513, 1404, 1871, 2738 |
| MfeI | CAATTG | 4 cut(s) | 2136, 2296, 2440, 3504 |
| MflI | RGATCY | 5 cut(s) | 763, 2159, 2228, 3345, 4241 |
| MhlI | GDGCHC | 8 cut(s) | 411, 738, 831, 1412, 1797, 2459, 3118, 3928 |
| MlsI | TGGCCA | 1 cut(s) | 1575 |
| MluI | ACGCGT | 1 cut(s) | 468 |
| MluNI | TGGCCA | 1 cut(s) | 1575 |
| MlyI | GAGTC | 6 cut(s) | 707, 1979, 2768, 2777, 3031, 3491 |
| MmeI | TCCRAC | 5 cut(s) | 143, 1681, 1854, 1919, 2805 |
| Mox20I | TGGCCA | 1 cut(s) | 1575 |
| Mph1103I | ATGCAT | 4 cut(s) | 574, 809, 1223, 1329 |
| MroI | TCCGGA | 1 cut(s) | 882 |
| MroNI | GCCGGC | 1 cut(s) | 311 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3897, 3948 |
| MscI | TGGCCA | 1 cut(s) | 1575 |
| MslI | CAYNNNNRTG | 4 cut(s) | 802, 1332, 2484, 3044 |
| Msp20I | TGGCCA | 1 cut(s) | 1575 |
| MspA1I | CMGCKG | 2 cut(s) | 1828, 4415 |
| MspCI | CTTAAG | 1 cut(s) | 2512 |
| MspI | CCGG | 8 cut(s) | 207, 312, 486, 541, 647, 731, 883, 2653 |
| MspR9I | CCNGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| MunI | CAATTG | 4 cut(s) | 2136, 2296, 2440, 3504 |
| Mva1269I | GAATGC | 5 cut(s) | 574, 1194, 1221, 3329, 4393 |
| MvaI | CCWGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| MvnI | CGCG | 1 cut(s) | 470 |
| NaeI | GCCGGC | 1 cut(s) | 313 |
| NcoI | CCATGG | 1 cut(s) | 4035 |
| NdeI | CATATG | 2 cut(s) | 2529, 2755 |
| NgoMIV | GCCGGC | 1 cut(s) | 311 |
| NheI | GCTAGC | 2 cut(s) | 1459, 3751 |
| NlaIV | GGNNCC | 3 cut(s) | 408, 765, 2712 |
| NmeAIII | GCCGAG | 3 cut(s) | 604, 695, 3646 |
| NmuCI | GTSAC | 5 cut(s) | 969, 1660, 1778, 3483, 4021 |
| NsbI | TGCGCA | 2 cut(s) | 3599, 3704 |
| NsiI | ATGCAT | 4 cut(s) | 574, 809, 1223, 1329 |
| NspI | RCATGY | 8 cut(s) | 439, 835, 977, 1327, 1925, 3456, 3562, 4034 |
| NspV | TTCGAA | 1 cut(s) | 749 |
| PaeI | GCATGC | 3 cut(s) | 1327, 3456, 4034 |
| PaeR7I | CTCGAG | 2 cut(s) | 443, 692 |
| PagI | TCATGA | 1 cut(s) | 4074 |
| PaqCI | CACCTGC | 1 cut(s) | 2211 |
| PasI | CCCWGGG | 1 cut(s) | 3389 |
| PciI | ACATGT | 1 cut(s) | 1921 |
| PciSI | GCTCTTC | 2 cut(s) | 3591, 4281 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 135, 510 |
| PctI | GAATGC | 5 cut(s) | 574, 1194, 1221, 3329, 4393 |
| PdiI | GCCGGC | 1 cut(s) | 313 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3897, 3948 |
| PflFI | GACNNNGTC | 2 cut(s) | 134, 512 |
| PfoI | TCCNGGA | 2 cut(s) | 2992, 3576 |
| PleI | GAGTC | 6 cut(s) | 707, 1979, 2767, 2777, 3030, 3490 |
| PmaCI | CACGTG | 1 cut(s) | 1405 |
| PmlI | CACGTG | 1 cut(s) | 1405 |
| PpsI | GAGTC | 6 cut(s) | 707, 1979, 2767, 2777, 3030, 3490 |
| Ppu21I | YACGTR | 1 cut(s) | 1405 |
| PscI | ACATGT | 1 cut(s) | 1921 |
| Psp124BI | GAGCTC | 1 cut(s) | 1797 |
| Psp1406I | AACGTT | 1 cut(s) | 1871 |
| Psp6I | CCWGG | 7 cut(s) | 1310, 1695, 2361, 2992, 3041, 3388, 3576 |
| PspCI | CACGTG | 1 cut(s) | 1405 |
| PspEI | GGTNACC | 1 cut(s) | 784 |
| PspGI | CCWGG | 7 cut(s) | 1310, 1695, 2361, 2992, 3041, 3388, 3576 |
| PspN4I | GGNNCC | 3 cut(s) | 408, 765, 2712 |
| PspPI | GGNCC | 5 cut(s) | 209, 229, 488, 1693, 3517 |
| PstI | CTGCAG | 1 cut(s) | 3226 |
| PsuI | RGATCY | 5 cut(s) | 763, 2159, 2228, 3345, 4241 |
| PsyI | GACNNNGTC | 2 cut(s) | 134, 512 |
| PvuII | CAGCTG | 1 cut(s) | 1828 |
| RseI | CAYNNNNRTG | 4 cut(s) | 802, 1332, 2484, 3044 |
| Rsr2I | CGGWCCG | 1 cut(s) | 488 |
| RsrII | CGGWCCG | 1 cut(s) | 488 |
| SacI | GAGCTC | 1 cut(s) | 1797 |
| SapI | GCTCTTC | 2 cut(s) | 3591, 4281 |
| Sau96I | GGNCC | 5 cut(s) | 209, 229, 488, 1693, 3517 |
| ScaI | AGTACT | 2 cut(s) | 1283, 3126 |
| SchI | GAGTC | 6 cut(s) | 707, 1979, 2768, 2777, 3031, 3491 |
| ScrFI | CCNGG | 7 cut(s) | 1312, 1697, 2363, 2994, 3043, 3390, 3578 |
| SduI | GDGCHC | 8 cut(s) | 411, 738, 831, 1412, 1797, 2459, 3118, 3928 |
| SfaNI | GCATC | 9 cut(s) | 579, 816, 994, 1107, 1723, 2167, 2824, 2911, 2915 |
| SfcI | CTRYAG | 2 cut(s) | 720, 3222 |
| Sfr274I | CTCGAG | 2 cut(s) | 443, 692 |
| SfuI | TTCGAA | 1 cut(s) | 749 |
| SinI | GGWCC | 3 cut(s) | 229, 488, 3517 |
| SlaI | CTCGAG | 2 cut(s) | 443, 692 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 802, 1332, 2484, 3044 |
| SphI | GCATGC | 3 cut(s) | 1327, 3456, 4034 |
| SspI | AATATT | 5 cut(s) | 461, 3166, 3240, 3404, 3699 |
| SstI | GAGCTC | 1 cut(s) | 1797 |
| StyD4I | CCNGG | 7 cut(s) | 1310, 1695, 2361, 2992, 3041, 3388, 3576 |
| StyI | CCWWGG | 4 cut(s) | 1449, 2155, 2823, 4035 |
| TaaI | ACNGT | 7 cut(s) | 679, 1041, 1900, 3052, 3871, 3969, 4098 |
| TaiI | ACGT | 4 cut(s) | 516, 1407, 1874, 2741 |
| TaqII | GACCGA | 2 cut(s) | 1584, 3505 |
| TatI | WGTACW | 7 cut(s) | 1243, 1281, 2075, 2327, 3124, 3208, 4301 |
| TauI | GCSGC | 3 cut(s) | 43, 249, 4415 |
| TscAI | CASTG | 3 cut(s) | 106, 1794, 3057 |
| TseFI | GTSAC | 5 cut(s) | 969, 1660, 1778, 3483, 4021 |
| Tsp45I | GTSAC | 5 cut(s) | 969, 1660, 1778, 3483, 4021 |
| TspGWI | ACGGA | 2 cut(s) | 480, 3146 |
| TspRI | CASTG | 3 cut(s) | 106, 1794, 3057 |
| Tth111I | GACNNNGTC | 2 cut(s) | 134, 512 |
| Vha464I | CTTAAG | 1 cut(s) | 2512 |
| VneI | GTGCAC | 1 cut(s) | 3114 |
| VpaK11BI | GGWCC | 3 cut(s) | 229, 488, 3517 |
| XapI | RAATTY | 9 cut(s) | 426, 917, 1969, 2351, 2773, 2808, 3059, 3524, 4224 |
| XbaI | TCTAGA | 1 cut(s) | 3496 |
| XceI | RCATGY | 8 cut(s) | 439, 835, 977, 1327, 1925, 3456, 3562, 4034 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2162, 3049 |
| XhoI | CTCGAG | 2 cut(s) | 443, 692 |
| XmiI | GTMKAC | 2 cut(s) | 473, 1560 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3897, 3948 |
| ZraI | GACGTC | 1 cut(s) | 514 |
| ZrmI | AGTACT | 2 cut(s) | 1283, 3126 |
| Zsp2I | ATGCAT | 4 cut(s) | 574, 809, 1223, 1329 |