Prupe.3G191100_v2.0.a1

Fanconi anaemia protein FancD2 nuclease

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
20380260 .. 20390907
10648 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G191100.1

Sequence Viewer

Length: 4590 bp
ATGGTGTTCCTCCACCAGCAAATCCCTTCACGCAAGCGACCGGCCTCCTCTTCTTTTGTCCCTCCTTTGCCTCCCCCAAAATCTTCCAAACCCTCCACCACCAATCCGACCCCAAACGACGTCGTCGAGACCCCAGCCATCGACAAAATGGCGTCTATACTCGCCGACGCTGGCTGCACCCTCCTCAACCACTCGGGCCCACCGTGCCTCCCTTCGGACTCACACAAGCTCCGCCGCCACCTCCACCGCACTTTCTCCTCTTCTGAAAATGCCCCTTCTCTTCTCTCTGATTTCCTCTCCGGCCTCTCCACCTATATCAACTCCTCCAAAAACCTCCGCAGGATTCTCACCACCTCCGGCAGAAGCGAGAGCTTAGTCCGGCACCTACTGCTGGTCCCCTCCATCCAATTACAGATTCAGAACATGCTTCTCGAGAAGCTTCCGGAGTATTTCCATGTATATCCGGAACATTCCGGTCCATCGCTGTCTCTTGAAGACGACATCGCTAGGCTTATCATCAATCACTTCCGGTGGCTCGATTTCATTGTCGATCCGAATGCCTTGGCCGAGAAATTGATGCTGGTTCTTTCGATTTGCCCTCTGCATTTGAAGAAAGAGATCATCGGATCGTTGCCGGAGATCATCGGAGATCAGAATAACCAGACTGTGGTTCGATCTCTTGAGAAATTGCTCCAGGAAGACTTGGCTGTTGTTGTGCCTGTGCTTGACTCCTTTTCAAATCTTAATTTGGATCCTCTGTTGCAAGAGCAGGTAATCACCATAGCATTGTCATGCATCAGAACAATTGATGCGGAGCACATGCCTCATCTGCTTAGGTTTTTACTGCTTTCAGCGACACTGTCAAATGCACGGAGAATAATCTCACAGATCCGTCAGCAGTTAAAATTTGTTGGAGTTTCAAATTATCGTACATCAGAAAAGAGTAAACTCAAAGGGAAGTCGCGTGCGGACAACACAGAGGCTTCAATTCTTGATGCGTTGAGATCAAGTCTTCGATTTAAGAATATACTATGTCAGGAGATTTTGAAAGAGTTAAACAGTCTTGAGAAACCTCAGGATCACAAAGTCATTGATATATGGCTACTTATGCTGATATACATGAATGGTGAATCCCTGCAAAGGAGCATTGAAAAGGTATTCAAGAAGAAAATTATTGAAGATTGCATTCAGGAAGCTATGTTTGATCAATGCATTCATGGACACAAGGAGCTGGTACAGGATTACTTTCTATCTTTCATTTCTTTGTCTGAGTACCTGTTGGCTTGCAAAGAGCCAAAAGCCCGGGAGTTTGGCATCCATATGTATGTTTGTCTCTTTGAGGAGTTTGCTGATACTTATTCAAGACAGGAAGTTCTTGGTTCGCTGGTTACCCATGTGGGCTCAAGTGTGGGTTTTGAAGTCAGTTCTGCTTTAGAGACAATGGCTTTGCTGGCCTCCAAATATTCACAGCAATTAATTCCTCTTTCTTCTCATATTAATGGTATCCTCGATTACTTAGAGGGATTTAGCGTTGAAAATTTGCACAAGGTCTACGAGATTTTTGGCCATCTGGCACTTTTGGCTCGGTCTAGTGCAGATTCATATGGTTCTTCCTTTGCAAATGAACTTTTGATGATAGTACGGAAGCAGGTCAGTCATCCAGAGCTGAATTACAAGAAGATGGGCCTTGTCGGAACTCTGAAGATGGTTTCCTGTCTAGGAGATGCAACTGATGTTACCTGTTCATCCTCATCTCAAAAATCAAATTGTGACGAGGCTTTGGAACTCTTGAAAATAGCTTTGGACTCTTGCAAACAGTTGCCCTTACCTTTGATCATGTTTTATGACGAACTGACTGAAATGATGGATTATAAAACACTTCATCCAACAGTTATGGAATGGATTGGGAAACATGTAGGAGAGTTTGAACCTCTGTTTCTGTCTGATCTTGATGGTGGGAATTTGGCTGTTAAGGACTCATATTGTGGTTTAGAAGGGGAGCTGTGGATGAACTTGGATGGTGATATATCCCCAATATGTCTAAACATTTTGCCATTAGCTTCCTCTTCATCGCAGTCTGCTTCTTCTTTACAAGTTCTTCCTGCTAACTTCCTTTTATTATCTGCAATTGAAAGGCTGACGAATCAAGGATCCCTTGGTGGAATTGATGCACTACTTGGCTGCCCTTTGCATCTGCCTTCTTCTAAGTATTTCTTTGGATCTGAGTGGAAGTCTCTGACAGGGAAGCAGAAACAGATTTTGTGTGCCTCTCTATATTATGCTGCCAATTGGATACGGGAGCTACTCAATGCCTTCTGTACACAAGTTACTGGGATATTTGAATTTACAAGCCAGGCTACAAAGGAGGATATAATTTCCAAGCTATTGAAGCGTTTGAGGAACCTTCTATTTTTGGAAAGCTTGTTAAACAATTGCATTGGGAGGTACTCTCTATCTCTTCCTGAACTTCATCCTTATGTGGATGTCTACCGTTCTTCTGCGTTAAACCAACCTCACCGTATGGGGCACATTGAAAAGAAACTTGACCATAAGAAAAAACATGAGGAAATCTCTCCAAGTGGCACAAGGACAAATAAAAAGACATCAAAGGAAACAACATCAGATACCAACCGGAATCTCCGGCAGCCTACATTATTGGATGTCTTAGAGAAAGCGGGAGTTCTACCAGGCCAAGATGTGCCAAATGAGGATTCTTCTGGTTTATCTACAAAGGGAAGGTCATATGAGTCATCAGACAAAAATTCCCATGACTCTGACGAGGCATCCTCTATAGAAATTTCTGCTGTTGGCAAGGCTATCGAAGCTCAGAGGATTAATTTCAGACCCCTCCTAGTTCATTGTTATGCCATTTTGACATTTTCAAAGAGTGAAGCCTCCTGTTGTATCGATGCTGCTGCTGAGTTACCCCTATATCTGTACCTTATGCGGGATCTTCACTACAAGCTGGATTTCTTCACTCCTGGAAAACAATTGTGGGGTAGATGCTTGAGTGCTCCAGTTGGGTTCACCAGGTTGACGGTAGATGGATTTTTGAGCAAAATTAAACCACTCTTTCCAAGTATTAAGAGGCATTTTGATAGTGCAGTTTTGTTACTTAAGGAAGGGGATGAAACTTGTGAAGAACATTGGAATATTCAATCTACTTTTGCTGGAAATCCAAATATTCCCAATCTTGTACTTTCAAAATCTGCAGTTTCTACTTCAGTATTCAAAGAAGTGCTTCATTGCTTCAGTGCGATATTAAACCTTCCTGGTATTCAGACAGACAAGTCAGCTCTCTCATGTCTGCTAGAAGCATTCCAGCCTACAGAGATTCCAGATAGCTTAATGGCAGACATACAACCTAACCTTTCTCCTGGGACTACAGAGTATTTATATTTGGGTGCTTATGCATTTTTTGAAGGTGTCTTGGACATAGCATGCTCTTTCTCCTTTATGCTGGCTTCAGAATCACTTTTTACTCTAGAATCGGTTGTAACCTCAATCCAGAAATTCATCAGTAAGTTGGAGGGAAATAGTAAAAACGTGCACTCAGAATTTATCCAGGAAGCTCTTCCAACTTTGCGCAGCAAACTTGGTATTTCTGCTCAGAATATTTTAAGGCATAGTTGGGATAATGAAAATGTTGAGAATGGTTGGAAGAGAAAAGGAGAAACAGTACAGAGAATATTGCGCATCTACCTGGACAGCAGCAACTCAACTTCTGACCTGCTGGATAAGCTAGCCTGCTCTATTTTGCCTCAGGCTTTATGCGAACGAATTGGAGAAGATGATCATCATGGTTTCCCATCTCTAAGTTCTGGAACATTTGTTGTGTGGTACAAGATACTGCATGAAGAGAATCTTTCTGTTCTTAACAAATTGGTCAAGGAAGCTGTTCTCCTAAAGAAAACCAGTACTCGTGCTCAACCCGAAACTATTGAAAAACTTCTAAGCAAGCTACAACAGTCTGTAAATGTGGTTGTGTCATTAGTTAACCTTTGTAAAACTTGTGCCAAGGTGACTCTGCATGCCATGGCTGTTGGTTATGGAGGGAAGTTTGTTGATTCCTTCCTGAAAGTTTTTGACTTCTTAGAGTCCCACTTTCAAGTTCACAATGAGCATATAATCCACTTGGTTTTAGAGCTTCAAAAGGCCACAAGAACAATACAGACCCTATGTTCTGAAGCAAAGGGCTTGAGACAAACAAGTATAACCAGAAAAATTCCTGCTACAAAGAGATCTATGGAACGGTTTTTATTCTGTGTGAAAGCTCTTCTCCATACAACATCAAATGGTTCTTCCTTCTGGATGGGCAACCTGAAGCATAAAGACTTGAAAGGTCAGGTGGTGAGTTCCCAAGTGTATGTAGATTCTGAAGATGACCACGTTGATGAAGAGCCAGCCGAAGGTGCTGATGAGGAGCCAGCCGAAGCTGCTGATGAAGAGCCAGCGGAAGCTGCTGATGAAGAGCAAGCCGAAGCTGCTAATGAAGAGCAAGCCGAAGCTGCTGATGAAGAGCCAGCCGAAGCTGCTGATGATTATCCACCTGTTAGTGTTGCTAGTGAAGAGGACAGAGAAACAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1530

Amino Acids

170.44

Weight (kDa)

5.62

Isoelectric Point (pI)

50.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1872
AasI GACNNNNNNGTC 1 cut(s) 3289
AatII GACGTC 1 cut(s) 123
Acc16I TGCGCA 2 cut(s) 3587, 3695
Acc36I ACCTGC 3 cut(s) 760, 1639, 3738
AccB1I GGYRCC 1 cut(s) 381
AccB7I CCANNNNNTGG 1 cut(s) 667
AccI GTMKAC 2 cut(s) 1551, 2487
AccII CGCG 1 cut(s) 964
AccIII TCCGGA 2 cut(s) 442, 463
AciI CCGC 9 cut(s) 232, 235, 247, 337, 812, 968, 2675, 2947, 4454
AcoI YGGCCR 2 cut(s) 564, 1564
AcsI RAATTY 9 cut(s) 905, 1537, 1960, 2342, 2761, 2796, 3512, 3557, 4224
AcuI CTGAAG 7 cut(s) 1721, 3207, 3235, 3450, 4206, 4343, 4398
AcyI GRCGYC 2 cut(s) 120, 152
AfiI CCNNNNNNNGG 6 cut(s) 214, 391, 667, 1140, 2947, 4409
AflII CTTAAG 1 cut(s) 3116
AflIII ACRYGT 1 cut(s) 1912
AjnI CCWGG 9 cut(s) 693, 2352, 2686, 2980, 3029, 3271, 3376, 3564, 3702
AjuI GAANNNNNNNTTGG 6 cut(s) 399, 431, 1784, 1816, 2695, 2727
Alw21I GWGCWC 4 cut(s) 819, 3016, 3552, 3928
Alw26I GTCTC 6 cut(s) 122, 492, 1337, 1430, 2238, 4195
Alw44I GTGCAC 1 cut(s) 3548
Ama87I CYCGRG 3 cut(s) 193, 431, 1302
Aor13HI TCCGGA 2 cut(s) 442, 463
AoxI GGCC 9 cut(s) 42, 196, 301, 564, 1452, 1564, 1684, 2689, 4155
ApaI GGGCCC 1 cut(s) 200
ApaLI GTGCAC 1 cut(s) 3548
ApoI RAATTY 9 cut(s) 905, 1537, 1960, 2342, 2761, 2796, 3512, 3557, 4224
ArsI GACNNNNNNTTYG 4 cut(s) 1429, 1461, 2723, 2755
AseI ATTAAT 3 cut(s) 1475, 1497, 2835
Asp700I GAANNNNTTC 4 cut(s) 3240, 3573, 3897, 3948
AspLEI GCGC 2 cut(s) 3588, 3696
AspS9I GGNCC 5 cut(s) 196, 197, 394, 476, 1684
AsuC2I CCSGG 2 cut(s) 1303, 1304
AsuHPI GGTGA 8 cut(s) 340, 769, 1139, 2033, 2507, 3019, 4033, 4363
AsuNHI GCTAGC 1 cut(s) 3742
AvaI CYCGRG 3 cut(s) 193, 431, 1302
AvaII GGWCC 2 cut(s) 394, 476
AxyI CCTNAGG 2 cut(s) 1074, 3762
BaeGI GKGCMC 3 cut(s) 200, 2529, 3552
BalI TGGCCA 1 cut(s) 1566
BamHI GGATCC 2 cut(s) 751, 2150
BanI GGYRCC 1 cut(s) 381
BanII GRGCYC 2 cut(s) 200, 1403
BauI CACGAG 1 cut(s) 3921
BbsI GAAGAC 3 cut(s) 501, 705, 1004
Bbv12I GWGCWC 4 cut(s) 819, 3016, 3552, 3928
BcgI CGANNNNNNTGC 6 cut(s) 539, 573, 2800, 2834, 2897, 2931
BciT130I CCWGG 9 cut(s) 695, 2354, 2688, 2982, 3031, 3273, 3378, 3566, 3704
BciVI GTATCC 2 cut(s) 1514, 2286
BclI TGATCA 3 cut(s) 1204, 1833, 3793
BcnI CCSGG 2 cut(s) 1303, 1304
BcoDI GTCTC 6 cut(s) 122, 492, 1337, 1430, 2238, 4195
BfaI CTAG 8 cut(s) 507, 1590, 1718, 2852, 3311, 3485, 3743, 4563
BfmI CTRYAG 4 cut(s) 2790, 3210, 3327, 3384
BfrI CTTAAG 1 cut(s) 3116
BfuAI ACCTGC 3 cut(s) 760, 1639, 3738
BfuI GTATCC 2 cut(s) 1514, 2286
BglII AGATCT 1 cut(s) 4241
BmcAI AGTACT 1 cut(s) 3919
Bme18I GGWCC 2 cut(s) 394, 476
BmeT110I CYCGRG 3 cut(s) 193, 431, 1302
BmgT120I GGNCC 5 cut(s) 196, 197, 394, 476, 1684
BmiI GGNNCC 7 cut(s) 198, 383, 396, 753, 2152, 2402, 4425
BmrI ACTGGG 1 cut(s) 2340
BmtI GCTAGC 1 cut(s) 3746
BmuI ACTGGG 1 cut(s) 2340
BpiI GAAGAC 3 cut(s) 501, 705, 1004
BplI GAGNNNNNCTC 6 cut(s) 2434, 2466, 2555, 2587, 2771, 2803
BpmI CTGGAG 2 cut(s) 677, 3000
Bpu10I CCTNAGC 1 cut(s) 833
BpuEI CTTGAG 5 cut(s) 701, 1085, 1387, 3028, 4219
BpuMI CCSGG 2 cut(s) 1303, 1304
Bsa29I ATCGAT 1 cut(s) 2907
BsaBI GATNNNNATC 2 cut(s) 3795, 4542
BsaHI GRCGYC 2 cut(s) 120, 152
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 6 cut(s) 561, 1302, 2155, 3377, 4017, 4035
BsaWI WCCGGW 5 cut(s) 442, 463, 473, 528, 2631
BsaXI ACNNNNNCTCC 6 cut(s) 192, 213, 222, 243, 3663, 3693
Bsc4I CCNNNNNNNGG 6 cut(s) 214, 391, 667, 1140, 2947, 4409
Bse118I RCCGGY 1 cut(s) 40
Bse1I ACTGG 3 cut(s) 2335, 3017, 3915
Bse21I CCTNAGG 2 cut(s) 1074, 3762
Bse3DI GCAATG 1 cut(s) 3244
Bse8I GATNNNNATC 2 cut(s) 3795, 4542
BseAI TCCGGA 2 cut(s) 442, 463
BseBI CCWGG 9 cut(s) 695, 2354, 2688, 2982, 3031, 3273, 3378, 3566, 3704
BseCI ATCGAT 1 cut(s) 2907
BseDI CCNNGG 6 cut(s) 561, 1302, 2155, 3377, 4017, 4035
BseJI GATNNNNATC 2 cut(s) 3795, 4542
BseLI CCNNNNNNNGG 6 cut(s) 214, 391, 667, 1140, 2947, 4409
BseMI GCAATG 1 cut(s) 3244
BseMII CTCAG 8 cut(s) 1088, 1260, 2214, 2840, 2910, 3567, 3623, 3776
BseNI ACTGG 3 cut(s) 2335, 3017, 3915
BseRI GAGGAG 6 cut(s) 37, 173, 247, 313, 1355, 4436
BseSI GKGCMC 3 cut(s) 200, 2529, 3552
BseYI CCCAGC 1 cut(s) 133
BsgI GTGCAG 3 cut(s) 160, 1614, 3123
Bsh1236I CGCG 1 cut(s) 964
Bsh1285I CGRYCG 1 cut(s) 41
BshFI GGCC 9 cut(s) 44, 198, 303, 566, 1454, 1566, 1686, 2691, 4157
BshNI GGYRCC 1 cut(s) 381
BshVI ATCGAT 1 cut(s) 2907
BsiEI CGRYCG 1 cut(s) 41
BsiHKAI GWGCWC 4 cut(s) 819, 3016, 3552, 3928
BsiHKCI CYCGRG 3 cut(s) 193, 431, 1302
BslFI GGGAC 4 cut(s) 44, 380, 3394, 4084
BslI CCNNNNNNNGG 6 cut(s) 214, 391, 667, 1140, 2947, 4409
BsmAI GTCTC 6 cut(s) 122, 492, 1337, 1430, 2238, 4195
BsmFI GGGAC 4 cut(s) 44, 380, 3394, 4084
BsmI GAATGC 4 cut(s) 562, 1185, 1212, 3317
BsnI GGCC 9 cut(s) 44, 198, 303, 566, 1454, 1566, 1686, 2691, 4157
Bso31I GGTCTC 1 cut(s) 122
BsoBI CYCGRG 3 cut(s) 193, 431, 1302
Bsp120I GGGCCC 1 cut(s) 196
Bsp1286I GDGCHC 7 cut(s) 200, 819, 1403, 2529, 3016, 3552, 3928
Bsp13I TCCGGA 2 cut(s) 442, 463
Bsp1407I TGTACA 1 cut(s) 2318
Bsp19I CCATGG 1 cut(s) 4035
BspACI CCGC 9 cut(s) 232, 235, 247, 337, 812, 968, 2675, 2947, 4454
BspANI GGCC 9 cut(s) 44, 198, 303, 566, 1454, 1566, 1686, 2691, 4157
BspCNI CTCAG 8 cut(s) 1087, 1261, 2215, 2839, 2911, 3566, 3622, 3775
BspDI ATCGAT 1 cut(s) 2907
BspEI TCCGGA 2 cut(s) 442, 463
BspFNI CGCG 1 cut(s) 964
BspLI GGNNCC 7 cut(s) 198, 383, 396, 753, 2152, 2402, 4425
BspMAI CTGCAG 1 cut(s) 3214
BspMI ACCTGC 3 cut(s) 760, 1639, 3738
BspOI GCTAGC 1 cut(s) 3746
BspQI GCTCTTC 7 cut(s) 3579, 4281, 4392, 4440, 4464, 4488, 4512
BspT107I GGYRCC 1 cut(s) 381
BspTI CTTAAG 1 cut(s) 3116
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 3244
BsrFI RCCGGY 1 cut(s) 40
BsrGI TGTACA 1 cut(s) 2318
BsrI ACTGG 3 cut(s) 2335, 3017, 3915
BssAI RCCGGY 1 cut(s) 40
BssECI CCNNGG 6 cut(s) 561, 1302, 2155, 3377, 4017, 4035
BssNI GRCGYC 2 cut(s) 120, 152
BssSI CACGAG 1 cut(s) 3921
BssT1I CCWWGG 4 cut(s) 561, 2155, 4017, 4035
Bst2BI CACGAG 1 cut(s) 3921
Bst2UI CCWGG 9 cut(s) 695, 2354, 2688, 2982, 3031, 3273, 3378, 3566, 3704
BstACI GRCGYC 2 cut(s) 120, 152
BstAFI CTTAAG 1 cut(s) 3116
BstAPI GCANNNNNTGC 1 cut(s) 388
BstAUI TGTACA 1 cut(s) 2318
BstDSI CCRYGG 1 cut(s) 4035
BstEII GGTNACC 1 cut(s) 1387
BstFNI CGCG 1 cut(s) 964
BstHHI GCGC 2 cut(s) 3588, 3696
BstMAI GTCTC 6 cut(s) 122, 492, 1337, 1430, 2238, 4195
BstMCI CGRYCG 1 cut(s) 41
BstNI CCWGG 9 cut(s) 695, 2354, 2688, 2982, 3031, 3273, 3378, 3566, 3704
BstNSI RCATGY 5 cut(s) 427, 823, 1916, 3444, 4034
BstPI GGTNACC 1 cut(s) 1387
BstSFI CTRYAG 4 cut(s) 2790, 3210, 3327, 3384
BstSLI GKGCMC 3 cut(s) 200, 2529, 3552
BstUI CGCG 1 cut(s) 964
BstV2I GAAGAC 3 cut(s) 501, 705, 1004
BstX2I RGATCY 6 cut(s) 751, 888, 2150, 2219, 2950, 4241
BstYI RGATCY 6 cut(s) 751, 888, 2150, 2219, 2950, 4241
Bsu15I ATCGAT 1 cut(s) 2907
Bsu36I CCTNAGG 2 cut(s) 1074, 3762
BsuI GTATCC 2 cut(s) 1514, 2286
BsuRI GGCC 9 cut(s) 44, 198, 303, 566, 1454, 1566, 1686, 2691, 4157
BsuTUI ATCGAT 1 cut(s) 2907
BtgI CCRYGG 1 cut(s) 4035
BtgZI GCGATG 3 cut(s) 465, 487, 2055
BtsIMutI CAGTG 2 cut(s) 857, 3259
BveI ACCTGC 3 cut(s) 760, 1639, 3738
CfoI GCGC 2 cut(s) 3588, 3696
Cfr10I RCCGGY 1 cut(s) 40
Cfr13I GGNCC 5 cut(s) 196, 197, 394, 476, 1684
Cfr9I CCCGGG 1 cut(s) 1302
ClaI ATCGAT 1 cut(s) 2907
CseI GACGC 2 cut(s) 141, 176
CsiI ACCWGGT 1 cut(s) 3029
DrdI GACNNNNNNGTC 1 cut(s) 3289
DseDI GACNNNNNNGTC 1 cut(s) 3289
EaeI YGGCCR 2 cut(s) 564, 1564
EciI GGCGGA 1 cut(s) 221
Eco130I CCWWGG 4 cut(s) 561, 2155, 4017, 4035
Eco24I GRGCYC 2 cut(s) 200, 1403
Eco31I GGTCTC 1 cut(s) 122
Eco47I GGWCC 2 cut(s) 394, 476
Eco57I CTGAAG 7 cut(s) 1721, 3207, 3235, 3450, 4206, 4343, 4398
Eco81I CCTNAGG 2 cut(s) 1074, 3762
Eco88I CYCGRG 3 cut(s) 193, 431, 1302
Eco91I GGTNACC 1 cut(s) 1387
EcoO65I GGTNACC 1 cut(s) 1387
EcoRII CCWGG 9 cut(s) 693, 2352, 2686, 2980, 3029, 3271, 3376, 3564, 3702
EcoT14I CCWWGG 4 cut(s) 561, 2155, 4017, 4035
EcoT22I ATGCAT 3 cut(s) 797, 1214, 3415
EcoT38I GRGCYC 2 cut(s) 200, 1403
ErhI CCWWGG 4 cut(s) 561, 2155, 4017, 4035
FalI AAGNNNNNCTT 8 cut(s) 2139, 2171, 2198, 2230, 3225, 3257, 3849, 3881
FaqI GGGAC 4 cut(s) 44, 380, 3394, 4084
FauI CCCGC 2 cut(s) 2668, 2940
FauNDI CATATG 3 cut(s) 1320, 1603, 2743
FbaI TGATCA 3 cut(s) 1204, 1833, 3793
FblI GTMKAC 2 cut(s) 1551, 2487
FriOI GRGCYC 2 cut(s) 200, 1403
FspBI CTAG 8 cut(s) 507, 1590, 1718, 2852, 3311, 3485, 3743, 4563
FspI TGCGCA 2 cut(s) 3587, 3695
GlaI GCGC 2 cut(s) 3587, 3695
GsaI CCCAGC 1 cut(s) 137
GsuI CTGGAG 2 cut(s) 677, 3000
HaeIII GGCC 9 cut(s) 44, 198, 303, 566, 1454, 1566, 1686, 2691, 4157
HgaI GACGC 2 cut(s) 141, 176
HhaI GCGC 2 cut(s) 3588, 3696
Hin1I GRCGYC 2 cut(s) 120, 152
Hin6I GCGC 2 cut(s) 3586, 3694
HinP1I GCGC 2 cut(s) 3586, 3694
HincII GTYRAC 2 cut(s) 3036, 3997
HindII GTYRAC 2 cut(s) 3036, 3997
HindIII AAGCTT 2 cut(s) 437, 2419
HpaI GTTAAC 1 cut(s) 3997
HphI GGTGA 8 cut(s) 340, 769, 1139, 2033, 2507, 3019, 4033, 4363
Hpy166II GTNNAC 9 cut(s) 947, 1552, 2321, 2488, 3027, 3036, 3550, 3997, 4114
Hpy8I GTNNAC 9 cut(s) 947, 1552, 2321, 2488, 3027, 3036, 3550, 3997, 4114
Hpy99I CGWCG 4 cut(s) 122, 125, 128, 170
HpyCH4IV ACGT 3 cut(s) 120, 3546, 4389
HpySE526I ACGT 3 cut(s) 120, 3546, 4389
Hsp92I GRCGYC 2 cut(s) 120, 152
HspAI GCGC 2 cut(s) 3586, 3694
Kpn2I TCCGGA 2 cut(s) 442, 463
Ksp22I TGATCA 3 cut(s) 1204, 1833, 3793
KspAI GTTAAC 1 cut(s) 3997
LguI GCTCTTC 7 cut(s) 3579, 4281, 4392, 4440, 4464, 4488, 4512
LmnI GCTCC 9 cut(s) 234, 696, 814, 1143, 1228, 1999, 2299, 3019, 4423
MabI ACCWGGT 1 cut(s) 3029
MaeI CTAG 8 cut(s) 507, 1590, 1718, 2852, 3311, 3485, 3743, 4563
MaeII ACGT 3 cut(s) 120, 3546, 4389
MaeIII GTNAC 8 cut(s) 1387, 1735, 1769, 2326, 2922, 3111, 3496, 4021
MfeI CAATTG 5 cut(s) 804, 2127, 2287, 2431, 2990
MflI RGATCY 6 cut(s) 751, 888, 2150, 2219, 2950, 4241
MhlI GDGCHC 7 cut(s) 200, 819, 1403, 2529, 3016, 3552, 3928
MlsI TGGCCA 1 cut(s) 1566
MluNI TGGCCA 1 cut(s) 1566
MlyI GAGTC 8 cut(s) 212, 722, 1799, 1970, 2756, 2765, 4018, 4106
MmeI TCCRAC 7 cut(s) 131, 892, 1672, 1910, 3507, 3602, 3638
Mox20I TGGCCA 1 cut(s) 1566
Mph1103I ATGCAT 3 cut(s) 797, 1214, 3415
MroI TCCGGA 2 cut(s) 442, 463
MroXI GAANNNNTTC 4 cut(s) 3240, 3573, 3897, 3948
MscI TGGCCA 1 cut(s) 1566
MslI CAYNNNNRTG 7 cut(s) 790, 1319, 1323, 1497, 2475, 2862, 4392
Msp20I TGGCCA 1 cut(s) 1566
MspA1I CMGCKG 1 cut(s) 4454
MspCI CTTAAG 1 cut(s) 3116
MunI CAATTG 5 cut(s) 804, 2127, 2287, 2431, 2990
Mva1269I GAATGC 4 cut(s) 562, 1185, 1212, 3317
MvaI CCWGG 9 cut(s) 695, 2354, 2688, 2982, 3031, 3273, 3378, 3566, 3704
MvnI CGCG 1 cut(s) 964
NciI CCSGG 2 cut(s) 1303, 1304
NcoI CCATGG 1 cut(s) 4035
NdeI CATATG 3 cut(s) 1320, 1603, 2743
NheI GCTAGC 1 cut(s) 3742
NlaIV GGNNCC 7 cut(s) 198, 383, 396, 753, 2152, 2402, 4425
NmeAIII GCCGAG 1 cut(s) 592
NmuCI GTSAC 2 cut(s) 1769, 4021
NsbI TGCGCA 2 cut(s) 3587, 3695
NsiI ATGCAT 3 cut(s) 797, 1214, 3415
NspI RCATGY 5 cut(s) 427, 823, 1916, 3444, 4034
PaeI GCATGC 2 cut(s) 3444, 4034
PaeR7I CTCGAG 1 cut(s) 431
PciI ACATGT 1 cut(s) 1912
PciSI GCTCTTC 7 cut(s) 3579, 4281, 4392, 4440, 4464, 4488, 4512
PcsI WCGNNNNNNNCGW 2 cut(s) 123, 200
PctI GAATGC 4 cut(s) 562, 1185, 1212, 3317
PdmI GAANNNNTTC 4 cut(s) 3240, 3573, 3897, 3948
PflFI GACNNNGTC 2 cut(s) 122, 859
PflMI CCANNNNNTGG 1 cut(s) 667
PfoI TCCNGGA 3 cut(s) 693, 2980, 3564
PleI GAGTC 8 cut(s) 212, 722, 1799, 1970, 2755, 2765, 4018, 4105
PpsI GAGTC 8 cut(s) 212, 722, 1799, 1970, 2755, 2765, 4018, 4105
PscI ACATGT 1 cut(s) 1912
PshBI ATTAAT 3 cut(s) 1475, 1497, 2835
PsiI TTATAA 1 cut(s) 1872
Psp6I CCWGG 9 cut(s) 693, 2352, 2686, 2980, 3029, 3271, 3376, 3564, 3702
PspEI GGTNACC 1 cut(s) 1387
PspFI CCCAGC 1 cut(s) 133
PspGI CCWGG 9 cut(s) 693, 2352, 2686, 2980, 3029, 3271, 3376, 3564, 3702
PspN4I GGNNCC 7 cut(s) 198, 383, 396, 753, 2152, 2402, 4425
PspOMI GGGCCC 1 cut(s) 196
PspPI GGNCC 5 cut(s) 196, 197, 394, 476, 1684
PstI CTGCAG 1 cut(s) 3214
PsuI RGATCY 6 cut(s) 751, 888, 2150, 2219, 2950, 4241
PsyI GACNNNGTC 2 cut(s) 122, 859
RseI CAYNNNNRTG 7 cut(s) 790, 1319, 1323, 1497, 2475, 2862, 4392
SapI GCTCTTC 7 cut(s) 3579, 4281, 4392, 4440, 4464, 4488, 4512
Sau96I GGNCC 5 cut(s) 196, 197, 394, 476, 1684
ScaI AGTACT 1 cut(s) 3919
SchI GAGTC 8 cut(s) 212, 722, 1799, 1970, 2756, 2765, 4018, 4106
SduI GDGCHC 7 cut(s) 200, 819, 1403, 2529, 3016, 3552, 3928
SexAI ACCWGGT 1 cut(s) 3029
SfcI CTRYAG 4 cut(s) 2790, 3210, 3327, 3384
Sfr274I CTCGAG 1 cut(s) 431
SinI GGWCC 2 cut(s) 394, 476
SlaI CTCGAG 1 cut(s) 431
SmaI CCCGGG 1 cut(s) 1304
SmiMI CAYNNNNRTG 7 cut(s) 790, 1319, 1323, 1497, 2475, 2862, 4392
SmlI CTYRAG 7 cut(s) 431, 680, 1064, 1402, 3007, 3116, 4198
SmoI CTYRAG 7 cut(s) 431, 680, 1064, 1402, 3007, 3116, 4198
SphI GCATGC 2 cut(s) 3444, 4034
SsiI CCGC 9 cut(s) 232, 235, 247, 337, 812, 968, 2675, 2947, 4454
SspI AATATT 5 cut(s) 1463, 3154, 3184, 3616, 3690
SspMI CTAG 8 cut(s) 507, 1590, 1718, 2852, 3311, 3485, 3743, 4563
StyI CCWWGG 4 cut(s) 561, 2155, 4017, 4035
TaiI ACGT 3 cut(s) 123, 3549, 4392
TaqII GACCGA 1 cut(s) 1575
TatI WGTACW 4 cut(s) 2318, 3196, 3679, 3917
TauI GCSGC 1 cut(s) 237
TscAI CASTG 2 cut(s) 864, 3259
TseFI GTSAC 2 cut(s) 1769, 4021
Tsp45I GTSAC 2 cut(s) 1769, 4021
TspGWI ACGGA 3 cut(s) 881, 886, 1657
TspMI CCCGGG 1 cut(s) 1302
TspRI CASTG 2 cut(s) 864, 3259
Tth111I GACNNNGTC 2 cut(s) 122, 859
Van91I CCANNNNNTGG 1 cut(s) 667
Vha464I CTTAAG 1 cut(s) 3116
VneI GTGCAC 1 cut(s) 3548
VpaK11BI GGWCC 2 cut(s) 394, 476
VspI ATTAAT 3 cut(s) 1475, 1497, 2835
XapI RAATTY 9 cut(s) 905, 1537, 1960, 2342, 2761, 2796, 3512, 3557, 4224
XbaI TCTAGA 1 cut(s) 3484
XceI RCATGY 5 cut(s) 427, 823, 1916, 3444, 4034
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XhoI CTCGAG 1 cut(s) 431
XmaI CCCGGG 1 cut(s) 1302
XmiI GTMKAC 2 cut(s) 1551, 2487
XmnI GAANNNNTTC 4 cut(s) 3240, 3573, 3897, 3948
XspI CTAG 8 cut(s) 507, 1590, 1718, 2852, 3311, 3485, 3743, 4563
ZraI GACGTC 1 cut(s) 121
ZrmI AGTACT 1 cut(s) 3919
Zsp2I ATGCAT 3 cut(s) 797, 1214, 3415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.