Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0019631

Physical Location & Seq

Genomic Coordinates Reverse (-)

18310472 .. 18313778

Gene Structure 3307 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1199800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGCGGCAGAGCTCTCAGACCCCAAAACCCCAGTGCCGCCACCACCACCAGCCCCTCCACTAACGCCGACAGTAACGGTGCGACCGCAGGCGCCGGCCGATCCTGAGAAGAAGTTCTCGCTGTATGTAGGCGACCTGGACCCATACGTCACCGACGACGACCTCCTCGCTACTTTTCGTTTCATCGGTCCCATCGCCTCCGTCCGTGTCTGCCGTGACTCTCACTCCGGCGAGTCCCTCCGCTACGGCTATGTCAACTTCTACTCACACTCTCACGCATCCAAGGCTATGGCTTGTCTGAACTACACTGAGCTGAAAGGGAAAACCATGAGAATAATGTGGTATCAGAGGGATCCCGCTCCAAGGAAAACTGGTCTTGGAAATGTCTTTGTGAAGAACCTGAACCCTGAAATCACCAGCACTCACTTGCAGGACATGTTCAGGGAGTTCGGGACTATACTCTCTTGCAAGGTAGCCGAAATAAATGGGAAGAGCAAGGGTTTTGGGTTTGTCCAGTTTGAAAAAGAGGAATCGGCTATGGCTGCTGTCAATGCTCTCAATGATACAATCATTAAGGGGAAGAAGTTATATGTATCGAAATTTGTGAAGAAAAGTGAGAGGATACCAGCCCAGGATGAATCCAAATTTACGAATCTGTTTGTGAAAAATCTGGATGAACATGTAACTGAAGATCTGCTTCGAGAGATGTTCTCTCAGTACGGAAGTGTTCATAGTCTTGTCATCATGAAGGATGAGAAAGGGAAGTCAAAAGGTTTCGGGTTTGTCAACTTTGAGTCACCAGAAGAGGCTAAGAAGGCTGTTGAGGGAATGAATGGTGCACTGCTGGGATCAAAACATTTGTTTGTAGGAAGGGCTCAAAGGAAAGCTGAGAGGGAAAGGCTTTTAAAATGTAAAGAGGAAATGCTGAACAGTCAGATTGAGAAACTTGAGTCTATGAATCTCTATGTTAAGAATCTAGCTGAATCTGTTGATGATAGCAAATTAGGAGAACATTTCAGTGCCTTTGGGAAGATTCTATCTGCGAAAGTGATGCGTGATGGCAACGGGATGAGCAGAGGTTTTGGTTTTGTTTGCTTCTCAACTCTTCAAGAAGCTGCAAAAGCTCGCAGTAATCTTAATGGAGCTATGTTTGAAGGACGAAAACTTTATGTGGCTGTAGCTCAACGAAAAGAAGATCGCTGCAAGGCTTTGCAAGATTACTGTACTCTTCAGCTACCACAAAGATCTTTGCAATCTCCAAACTGGCCTGCCCTGCACCCGGTCCAGTACAGCGTTTCCCCAAGGCCTCCTACGGTTCCTCTGTTATGCCCGCCAGTCATGCATCAAAGTTTTGGTACTAATGTTGATGCGCATTACCCTTTTGTTCTAAGCAGACAACCACAGTGGGGTAGCAGCACTAGGAATGAGAATTTCCAGAAGAATTCCAGGACATATGCTAACTCAAATGTTCATACCAACTCTTGGAATCATGGAGGTTATGAAGCTACAGGAAACCGGAAGAAGGTTTACAAACAGAGTGGAGCCGCTGCAGGAAGTTCAAGATCAGCAACTACAGGAGGCAGAGCTCCTCTCACTGAAGCATCAATCACTGGGAGCTCCAACTCGAAGACAACTCTAAGGGATCGACGCCGCTTGTTTGTTGAGAACCTTCAGCCTGGGCGTGCAGCACAGATAACAGGAACATCGGGAATGCTGTGGGAGTTGAACAGTTCTGAGAAAGCAGCAGCTCAAGTTTTGAAGGTGGCAAATGGTACCAGGACCAGCGCAGATCGTCCATGTTCGCTAAGGGTGGCCGCTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003682 GO:0003723 GO:0003727 GO:0004857 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005840 GO:0006139 GO:0006412 GO:0006413 GO:0006417 GO:0006446 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0008428 GO:0009058 GO:0009059 GO:0009889 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010494 GO:0010556 GO:0010608 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0030234 GO:0031323 GO:0031326 GO:0031329 GO:0032268 GO:0032991 GO:0034236 GO:0034248 GO:0034641 GO:0034645 GO:0035770 GO:0036464 GO:0043043 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050790 GO:0050794 GO:0051018 GO:0051171 GO:0051246 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0065009 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0098772 GO:1900151 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1903311 GO:1990841 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

RRM_1

Protein Analysis

608

Amino Acids

67.21

Weight (kDa)

9.5

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	41 - 111	1.5e-16	RNA recognition motif
RRM_1	PF00076	129 - 196	2.2e-20	RNA recognition motif
RRM_1	PF00076	219 - 286	1.7e-23	RNA recognition motif
RRM_1	PF00076	321 - 389	1.9e-19	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0019631)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16380
malus_domestica	MD09G1199800.v1.1 MD17G1180400.v1.1
prunus_persica	Prupe.3G056300_v2.0.a1 Prupe.3G056300_v2.0.a1
pyrus_communis	pycom09g11700 pycom17g18970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	146
Acc16I	TGCGCA	1 cut(s)	1371
Acc65I	GGTACC	1 cut(s)	1772
AccB1I	GGYRCC	2 cut(s)	91, 1772
AccB7I	CCANNNNNTGG	1 cut(s)	1482
AccBSI	CCGCTC	1 cut(s)	359
AciI	CCGC	9 cut(s)	5, 38, 86, 241, 357, 1331, 1545, 1651, 1815
AclWI	GGATC	5 cut(s)	95, 347, 360, 856, 1650
AcoI	YGGCCR	2 cut(s)	96, 1812
AcsI	RAATTY	4 cut(s)	599, 644, 1429, 1441
AcuI	CTGAAG	4 cut(s)	708, 1214, 1617, 1655
AcyI	GRCGYC	2 cut(s)	92, 1648
AfaI	GTAC	5 cut(s)	719, 1225, 1289, 1357, 1774
AfiI	CCNNNNNNNGG	5 cut(s)	363, 1279, 1406, 1482, 1522
AflIII	ACRYGT	2 cut(s)	435, 679
AgsI	TTSAA	6 cut(s)	521, 1109, 1154, 1560, 1726, 1759
AjnI	CCWGG	5 cut(s)	135, 630, 1445, 1675, 1775
Alw21I	GWGCWC	4 cut(s)	15, 841, 1588, 1619
Alw44I	GTGCAC	1 cut(s)	837
AlwI	GGATC	5 cut(s)	95, 347, 360, 856, 1650
AoxI	GGCC	4 cut(s)	96, 1265, 1304, 1812
ApaLI	GTGCAC	1 cut(s)	837
ApeKI	GCWGC	8 cut(s)	542, 1115, 1200, 1413, 1547, 1685, 1742, 1745
ApoI	RAATTY	4 cut(s)	599, 644, 1429, 1441
Asp700I	GAANNNNTTC	1 cut(s)	113
Asp718I	GGTACC	1 cut(s)	1772
AspLEI	GCGC	3 cut(s)	94, 1372, 1787
AspS9I	GGNCC	4 cut(s)	139, 188, 1282, 1779
AsuC2I	CCSGG	1 cut(s)	1280
AsuHPI	GGTGA	3 cut(s)	142, 406, 789
AvaII	GGWCC	4 cut(s)	139, 188, 1282, 1779
BaeGI	GKGCMC	1 cut(s)	841
BaeI	ACNNNNGTAYC	2 cut(s)	1347, 1380
BamHI	GGATCC	1 cut(s)	352
BanI	GGYRCC	2 cut(s)	91, 1772
BanII	GRGCYC	4 cut(s)	15, 877, 1588, 1619
BarI	GAAGNNNNNNTAC	2 cut(s)	1511, 1543
BbsI	GAAGAC	1 cut(s)	1634
Bbv12I	GWGCWC	4 cut(s)	15, 841, 1588, 1619
BbvI	GCAGC	8 cut(s)	529, 1102, 1187, 1425, 1534, 1697, 1754, 1757
BccI	CCATC	2 cut(s)	200, 1052
BceAI	ACGGC	2 cut(s)	198, 262
BcgI	CGANNNNNNTGC	2 cut(s)	1033, 1067
BciT130I	CCWGG	5 cut(s)	137, 632, 1447, 1677, 1777
BciVI	GTATCC	1 cut(s)	615
BcnI	CCSGG	1 cut(s)	1280
BfaI	CTAG	2 cut(s)	977, 1419
BfmI	CTRYAG	4 cut(s)	1176, 1506, 1548, 1572
BfoI	RGCGCY	1 cut(s)	95
BfuI	GTATCC	1 cut(s)	615
BglII	AGATCT	2 cut(s)	691, 1244
Bme1390I	CCNGG	6 cut(s)	137, 632, 1280, 1447, 1677, 1777
Bme18I	GGWCC	4 cut(s)	139, 188, 1282, 1779
BmgT120I	GGNCC	4 cut(s)	139, 188, 1282, 1779
BmiI	GGNNCC	7 cut(s)	93, 141, 190, 354, 1317, 1543, 1774
BmrFI	CCNGG	6 cut(s)	137, 632, 1280, 1447, 1677, 1777
BmrI	ACTGGG	2 cut(s)	26, 1620
BmsI	GCATC	5 cut(s)	287, 1041, 1351, 1357, 1610
BmuI	ACTGGG	2 cut(s)	26, 1620
BpiI	GAAGAC	1 cut(s)	1634
BplI	GAGNNNNNCTC	4 cut(s)	695, 727, 1575, 1607
Bpu10I	CCTNAGC	1 cut(s)	1805
BpuEI	CTTGAG	2 cut(s)	968, 1734
BpuMI	CCSGG	1 cut(s)	1280
BsaHI	GRCGYC	2 cut(s)	92, 1648
BsaJI	CCNNGG	5 cut(s)	282, 362, 630, 1301, 1676
BsaWI	WCCGGW	1 cut(s)	1515
BsaXI	ACNNNNNCTCC	2 cut(s)	209, 239
Bsc4I	CCNNNNNNNGG	5 cut(s)	363, 1279, 1406, 1482, 1522
Bse118I	RCCGGY	1 cut(s)	94
Bse1I	ACTGG	7 cut(s)	32, 376, 514, 1268, 1285, 1334, 1615
BseBI	CCWGG	5 cut(s)	137, 632, 1447, 1677, 1777
BseDI	CCNNGG	5 cut(s)	282, 362, 630, 1301, 1676
BseGI	GGATG	5 cut(s)	278, 640, 679, 757, 1074
BseLI	CCNNNNNNNGG	5 cut(s)	363, 1279, 1406, 1482, 1522
BseMII	CTCAG	6 cut(s)	30, 96, 300, 728, 879, 1725
BseNI	ACTGG	7 cut(s)	32, 376, 514, 1268, 1285, 1334, 1615
BseRI	GAGGAG	2 cut(s)	155, 1578
BseSI	GKGCMC	1 cut(s)	841
BseX3I	CGGCCG	1 cut(s)	96
BseXI	GCAGC	8 cut(s)	529, 1102, 1187, 1425, 1534, 1697, 1754, 1757
BseYI	CCCAGC	1 cut(s)	844
BsgI	GTGCAG	2 cut(s)	1259, 1704
Bsh1285I	CGRYCG	2 cut(s)	86, 99
BshFI	GGCC	4 cut(s)	98, 1267, 1306, 1814
BshNI	GGYRCC	2 cut(s)	91, 1772
BsiEI	CGRYCG	2 cut(s)	86, 99
BsiHKAI	GWGCWC	4 cut(s)	15, 841, 1588, 1619
BsiSI	CCGG	4 cut(s)	95, 228, 1280, 1516
BslFI	GGGAC	3 cut(s)	174, 220, 466
BslI	CCNNNNNNNGG	5 cut(s)	363, 1279, 1406, 1482, 1522
BsmFI	GGGAC	3 cut(s)	174, 220, 466
BsmI	GAATGC	1 cut(s)	1716
BsnI	GGCC	4 cut(s)	98, 1267, 1306, 1814
Bsp1286I	GDGCHC	5 cut(s)	15, 841, 877, 1588, 1619
Bsp143I	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
BspACI	CCGC	9 cut(s)	5, 38, 86, 241, 357, 1331, 1545, 1651, 1815
BspANI	GGCC	4 cut(s)	98, 1267, 1306, 1814
BspCNI	CTCAG	6 cut(s)	29, 97, 301, 727, 880, 1726
BspHI	TCATGA	1 cut(s)	744
BspLI	GGNNCC	7 cut(s)	93, 141, 190, 354, 1317, 1543, 1774
BspMAI	CTGCAG	1 cut(s)	1552
BspPI	GGATC	5 cut(s)	95, 347, 360, 856, 1650
BspQI	GCTCTTC	1 cut(s)	485
BspT107I	GGYRCC	2 cut(s)	91, 1772
BsrBI	CCGCTC	1 cut(s)	359
BsrFI	RCCGGY	1 cut(s)	94
BsrI	ACTGG	7 cut(s)	32, 376, 514, 1268, 1285, 1334, 1615
BssAI	RCCGGY	1 cut(s)	94
BssECI	CCNNGG	5 cut(s)	282, 362, 630, 1301, 1676
BssMI	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
BssNI	GRCGYC	2 cut(s)	92, 1648
BssT1I	CCWWGG	3 cut(s)	282, 362, 1301
Bst2UI	CCWGG	5 cut(s)	137, 632, 1447, 1677, 1777
Bst4CI	ACNGT	7 cut(s)	73, 79, 932, 1223, 1315, 1404, 1730
Bst6I	CTCTTC	4 cut(s)	485, 798, 1110, 1233
BstACI	GRCGYC	2 cut(s)	92, 1648
BstC8I	GCNNGC	6 cut(s)	90, 96, 1126, 1269, 1331, 1683
BstF5I	GGATG	5 cut(s)	278, 640, 679, 757, 1074
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	3 cut(s)	94, 1372, 1787
BstKTI	GATC	9 cut(s)	103, 355, 694, 851, 1198, 1247, 1565, 1645, 1792
BstMBI	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
BstMCI	CGRYCG	2 cut(s)	86, 99
BstMWI	GCNNNNNNNGC	7 cut(s)	284, 542, 551, 815, 1121, 1273, 1339
BstNI	CCWGG	5 cut(s)	137, 632, 1447, 1677, 1777
BstNSI	RCATGY	2 cut(s)	439, 683
BstSCI	CCNGG	6 cut(s)	135, 630, 1278, 1445, 1675, 1775
BstSFI	CTRYAG	4 cut(s)	1176, 1506, 1548, 1572
BstSLI	GKGCMC	1 cut(s)	841
BstV1I	GCAGC	8 cut(s)	529, 1102, 1187, 1425, 1534, 1697, 1754, 1757
BstV2I	GAAGAC	1 cut(s)	1634
BstX2I	RGATCY	3 cut(s)	352, 691, 1244
BstXI	CCANNNNNNTGG	1 cut(s)	289
BstYI	RGATCY	3 cut(s)	352, 691, 1244
BstZI	CGGCCG	1 cut(s)	96
BsuI	GTATCC	1 cut(s)	615
BsuRI	GGCC	4 cut(s)	98, 1267, 1306, 1814
BtgZI	GCGATG	1 cut(s)	178
BtsCI	GGATG	5 cut(s)	278, 640, 679, 757, 1074
BtsI	GCAGTG	1 cut(s)	839
BtsIMutI	CAGTG	7 cut(s)	39, 306, 839, 1024, 1409, 1593, 1608
Cac8I	GCNNGC	6 cut(s)	90, 96, 1126, 1269, 1331, 1683
CciI	TCATGA	1 cut(s)	744
CfoI	GCGC	3 cut(s)	94, 1372, 1787
Cfr10I	RCCGGY	1 cut(s)	94
Cfr13I	GGNCC	4 cut(s)	139, 188, 1282, 1779
CseI	GACGC	1 cut(s)	1656
Csp6I	GTAC	5 cut(s)	718, 1224, 1288, 1356, 1773
CspCI	CAANNNNNGTGG	4 cut(s)	1385, 1420, 1519, 1554
CviAII	CATG	7 cut(s)	328, 436, 680, 745, 1339, 1490, 1797
CviQI	GTAC	5 cut(s)	718, 1224, 1288, 1356, 1773
DinI	GGCGCC	1 cut(s)	93
DpnI	GATC	9 cut(s)	102, 354, 693, 850, 1197, 1246, 1564, 1644, 1791
DpnII	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
DraI	TTTAAA	1 cut(s)	906
DrdI	GACNNNNNNGTC	1 cut(s)	146
DseDI	GACNNNNNNGTC	1 cut(s)	146
EaeI	YGGCCR	2 cut(s)	96, 1812
EagI	CGGCCG	1 cut(s)	96
Eam1104I	CTCTTC	4 cut(s)	485, 798, 1110, 1233
EarI	CTCTTC	4 cut(s)	485, 798, 1110, 1233
Ecl136II	GAGCTC	3 cut(s)	13, 1586, 1617
EclXI	CGGCCG	1 cut(s)	96
Eco130I	CCWWGG	3 cut(s)	282, 362, 1301
Eco147I	AGGCCT	1 cut(s)	1306
Eco24I	GRGCYC	4 cut(s)	15, 877, 1588, 1619
Eco47I	GGWCC	4 cut(s)	139, 188, 1282, 1779
Eco52I	CGGCCG	1 cut(s)	96
Eco53kI	GAGCTC	3 cut(s)	13, 1586, 1617
Eco57I	CTGAAG	4 cut(s)	708, 1214, 1617, 1655
EcoICRI	GAGCTC	3 cut(s)	13, 1586, 1617
EcoRI	GAATTC	1 cut(s)	1441
EcoRII	CCWGG	5 cut(s)	135, 630, 1445, 1675, 1775
EcoT14I	CCWWGG	3 cut(s)	282, 362, 1301
EcoT22I	ATGCAT	1 cut(s)	1344
EcoT38I	GRGCYC	4 cut(s)	15, 877, 1588, 1619
EgeI	GGCGCC	1 cut(s)	93
EheI	GGCGCC	1 cut(s)	93
ErhI	CCWWGG	3 cut(s)	282, 362, 1301
FaeI	CATG	7 cut(s)	331, 439, 683, 748, 1342, 1493, 1800
FalI	AAGNNNNNCTT	2 cut(s)	681, 713
FaqI	GGGAC	3 cut(s)	174, 220, 466
FatI	CATG	7 cut(s)	327, 435, 679, 744, 1338, 1489, 1796
FauI	CCCGC	2 cut(s)	364, 1338
FauNDI	CATATG	1 cut(s)	1453
FokI	GGATG	5 cut(s)	265, 647, 686, 764, 1081
FriOI	GRGCYC	4 cut(s)	15, 877, 1588, 1619
FspAI	RTGCGCAY	1 cut(s)	1371
FspBI	CTAG	2 cut(s)	977, 1419
FspI	TGCGCA	1 cut(s)	1371
GlaI	GCGC	3 cut(s)	93, 1371, 1786
GsaI	CCCAGC	1 cut(s)	848
HaeII	RGCGCY	1 cut(s)	95
HaeIII	GGCC	4 cut(s)	98, 1267, 1306, 1814
HapII	CCGG	4 cut(s)	95, 228, 1280, 1516
HgaI	GACGC	1 cut(s)	1656
HhaI	GCGC	3 cut(s)	94, 1372, 1787
Hin1I	GRCGYC	2 cut(s)	92, 1648
Hin1II	CATG	7 cut(s)	331, 439, 683, 748, 1342, 1493, 1800
Hin6I	GCGC	3 cut(s)	92, 1370, 1785
HinP1I	GCGC	3 cut(s)	92, 1370, 1785
HincII	GTYRAC	2 cut(s)	256, 787
HindII	GTYRAC	2 cut(s)	256, 787
HpaII	CCGG	4 cut(s)	95, 228, 1280, 1516
HphI	GGTGA	3 cut(s)	142, 406, 789
Hpy166II	GTNNAC	4 cut(s)	256, 787, 839, 1528
Hpy188I	TCNGA	5 cut(s)	19, 300, 348, 936, 1735
Hpy188III	TCNNGA	9 cut(s)	104, 451, 671, 701, 745, 1109, 1435, 1560, 1707
Hpy8I	GTNNAC	4 cut(s)	256, 787, 839, 1528
Hpy99I	CGWCG	3 cut(s)	158, 161, 1650
HpyAV	CCTTC	7 cut(s)	742, 808, 864, 1148, 1516, 1679, 1753
HpyCH4III	ACNGT	7 cut(s)	73, 79, 932, 1223, 1315, 1404, 1730
HpyCH4IV	ACGT	1 cut(s)	147
HpyF10VI	GCNNNNNNNGC	7 cut(s)	284, 542, 551, 815, 1121, 1273, 1339
HpySE526I	ACGT	1 cut(s)	147
Hsp92I	GRCGYC	2 cut(s)	92, 1648
Hsp92II	CATG	7 cut(s)	331, 439, 683, 748, 1342, 1493, 1800
HspAI	GCGC	3 cut(s)	92, 1370, 1785
KasI	GGCGCC	1 cut(s)	91
KpnI	GGTACC	1 cut(s)	1776
KroI	GCCGGC	1 cut(s)	94
KroNI	GCCGGC	1 cut(s)	96
Kzo9I	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
LguI	GCTCTTC	1 cut(s)	485
LmnI	GCTCC	6 cut(s)	364, 1142, 1541, 1591, 1614, 1622
Lsp1109I	GCAGC	8 cut(s)	529, 1102, 1187, 1425, 1534, 1697, 1754, 1757
LweI	GCATC	5 cut(s)	287, 1041, 1351, 1357, 1610
MaeI	CTAG	2 cut(s)	977, 1419
MaeII	ACGT	1 cut(s)	147
MaeIII	GTNAC	5 cut(s)	73, 148, 215, 682, 795
MalI	GATC	9 cut(s)	102, 354, 693, 850, 1197, 1246, 1564, 1644, 1791
MbiI	CCGCTC	1 cut(s)	359
MboI	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
MflI	RGATCY	3 cut(s)	352, 691, 1244
MhlI	GDGCHC	5 cut(s)	15, 841, 877, 1588, 1619
MluCI	AATT	5 cut(s)	599, 644, 1001, 1429, 1441
Mly113I	GGCGCC	1 cut(s)	92
MlyI	GAGTC	4 cut(s)	212, 242, 803, 959
MmeI	TCCRAC	1 cut(s)	1644
Mph1103I	ATGCAT	1 cut(s)	1344
MroNI	GCCGGC	1 cut(s)	94
MroXI	GAANNNNTTC	1 cut(s)	113
MseI	TTAA	4 cut(s)	573, 905, 969, 1137
MslI	CAYNNNNRTG	1 cut(s)	1017
MspA1I	CMGCKG	1 cut(s)	1547
MspI	CCGG	4 cut(s)	95, 228, 1280, 1516
MspR9I	CCNGG	6 cut(s)	137, 632, 1280, 1447, 1677, 1777
Mva1269I	GAATGC	1 cut(s)	1716
MvaI	CCWGG	5 cut(s)	137, 632, 1447, 1677, 1777
MwoI	GCNNNNNNNGC	7 cut(s)	284, 542, 551, 815, 1121, 1273, 1339
NaeI	GCCGGC	1 cut(s)	96
NarI	GGCGCC	1 cut(s)	92
NciI	CCSGG	1 cut(s)	1280
NdeI	CATATG	1 cut(s)	1453
NdeII	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
NgoMIV	GCCGGC	1 cut(s)	94
NlaIII	CATG	7 cut(s)	331, 439, 683, 748, 1342, 1493, 1800
NlaIV	GGNNCC	7 cut(s)	93, 141, 190, 354, 1317, 1543, 1774
NmuCI	GTSAC	3 cut(s)	148, 215, 795
NsbI	TGCGCA	1 cut(s)	1371
NsiI	ATGCAT	1 cut(s)	1344
NspI	RCATGY	2 cut(s)	439, 683
PagI	TCATGA	1 cut(s)	744
PceI	AGGCCT	1 cut(s)	1306
PciI	ACATGT	2 cut(s)	435, 679
PciSI	GCTCTTC	1 cut(s)	485
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PctI	GAATGC	1 cut(s)	1716
PdiI	GCCGGC	1 cut(s)	96
PdmI	GAANNNNTTC	1 cut(s)	113
PfeI	GAWTC	8 cut(s)	530, 638, 652, 958, 973, 983, 1033, 1486
PflMI	CCANNNNNTGG	1 cut(s)	1482
PfoI	TCCNGGA	1 cut(s)	1445
PleI	GAGTC	4 cut(s)	212, 241, 802, 958
PluTI	GGCGCC	1 cut(s)	95
PpsI	GAGTC	4 cut(s)	212, 241, 802, 958
PscI	ACATGT	2 cut(s)	435, 679
Psp124BI	GAGCTC	3 cut(s)	15, 1588, 1619
Psp6I	CCWGG	5 cut(s)	135, 630, 1445, 1675, 1775
PspFI	CCCAGC	1 cut(s)	844
PspGI	CCWGG	5 cut(s)	135, 630, 1445, 1675, 1775
PspN4I	GGNNCC	7 cut(s)	93, 141, 190, 354, 1317, 1543, 1774
PspPI	GGNCC	4 cut(s)	139, 188, 1282, 1779
PstI	CTGCAG	1 cut(s)	1552
PsuI	RGATCY	3 cut(s)	352, 691, 1244
RsaI	GTAC	5 cut(s)	719, 1225, 1289, 1357, 1774
RsaNI	GTAC	5 cut(s)	718, 1224, 1288, 1356, 1773
RseI	CAYNNNNRTG	1 cut(s)	1017
SacI	GAGCTC	3 cut(s)	15, 1588, 1619
SapI	GCTCTTC	1 cut(s)	485
SaqAI	TTAA	4 cut(s)	573, 905, 969, 1137
Sau3AI	GATC	9 cut(s)	100, 352, 691, 848, 1195, 1244, 1562, 1642, 1789
Sau96I	GGNCC	4 cut(s)	139, 188, 1282, 1779
SchI	GAGTC	4 cut(s)	212, 242, 803, 959
ScrFI	CCNGG	6 cut(s)	137, 632, 1280, 1447, 1677, 1777
SduI	GDGCHC	5 cut(s)	15, 841, 877, 1588, 1619
SfaNI	GCATC	5 cut(s)	287, 1041, 1351, 1357, 1610
SfcI	CTRYAG	4 cut(s)	1176, 1506, 1548, 1572
SfoI	GGCGCC	1 cut(s)	93
SinI	GGWCC	4 cut(s)	139, 188, 1282, 1779
SmiMI	CAYNNNNRTG	1 cut(s)	1017
SmlI	CTYRAG	2 cut(s)	947, 1749
SmoI	CTYRAG	2 cut(s)	947, 1749
Sse9I	AATT	5 cut(s)	599, 644, 1001, 1429, 1441
SseBI	AGGCCT	1 cut(s)	1306
SsiI	CCGC	9 cut(s)	5, 38, 86, 241, 357, 1331, 1545, 1651, 1815
SspDI	GGCGCC	1 cut(s)	91
SspMI	CTAG	2 cut(s)	977, 1419
SstI	GAGCTC	3 cut(s)	15, 1588, 1619
StuI	AGGCCT	1 cut(s)	1306
StyD4I	CCNGG	6 cut(s)	135, 630, 1278, 1445, 1675, 1775
StyI	CCWWGG	3 cut(s)	282, 362, 1301
TaaI	ACNGT	7 cut(s)	73, 79, 932, 1223, 1315, 1404, 1730
TaiI	ACGT	1 cut(s)	150
TaqI	TCGA	4 cut(s)	596, 700, 1625, 1645
TaqII	GACCGA	1 cut(s)	176
TasI	AATT	5 cut(s)	599, 644, 1001, 1429, 1441
TatI	WGTACW	2 cut(s)	1223, 1287
TauI	GCSGC	5 cut(s)	8, 40, 1547, 1653, 1817
TfiI	GAWTC	8 cut(s)	530, 638, 652, 958, 973, 983, 1033, 1486
Tru1I	TTAA	4 cut(s)	573, 905, 969, 1137
Tru9I	TTAA	4 cut(s)	573, 905, 969, 1137
TscAI	CASTG	7 cut(s)	39, 313, 846, 1024, 1409, 1600, 1615
TseFI	GTSAC	3 cut(s)	148, 215, 795
TseI	GCWGC	8 cut(s)	542, 1115, 1200, 1413, 1547, 1685, 1742, 1745
Tsp45I	GTSAC	3 cut(s)	148, 215, 795
TspDTI	ATGAA	9 cut(s)	172, 651, 690, 719, 761, 845, 971, 1460, 1515
TspGWI	ACGGA	3 cut(s)	190, 194, 735
TspRI	CASTG	7 cut(s)	39, 313, 846, 1024, 1409, 1600, 1615
Van91I	CCANNNNNTGG	1 cut(s)	1482
VneI	GTGCAC	1 cut(s)	837
VpaK11BI	GGWCC	4 cut(s)	139, 188, 1282, 1779
XapI	RAATTY	4 cut(s)	599, 644, 1429, 1441
XceI	RCATGY	2 cut(s)	439, 683
XmnI	GAANNNNTTC	1 cut(s)	113
XspI	CTAG	2 cut(s)	977, 1419
Zsp2I	ATGCAT	1 cut(s)	1344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.