polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16380 |
| malus_domestica | MD09G1199800.v1.1 MD17G1180400.v1.1 |
| prunus_persica | Prupe.3G056300_v2.0.a1 Prupe.3G056300_v2.0.a1 |
| pyrus_communis | pycom09g11700 pycom17g18970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 146 |
| AccB1I | GGYRCC | 1 cut(s) | 91 |
| AccI | GTMKAC | 1 cut(s) | 953 |
| AciI | CCGC | 5 cut(s) | 5, 38, 65, 86, 241 |
| AclWI | GGATC | 5 cut(s) | 95, 347, 360, 699, 856 |
| AcoI | YGGCCR | 1 cut(s) | 96 |
| AcsI | RAATTY | 2 cut(s) | 599, 644 |
| AcuI | CTGAAG | 1 cut(s) | 1307 |
| AcyI | GRCGYC | 1 cut(s) | 92 |
| AfaI | GTAC | 1 cut(s) | 719 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 363, 1196 |
| AflIII | ACRYGT | 3 cut(s) | 145, 435, 679 |
| AgsI | TTSAA | 3 cut(s) | 521, 1109, 1247 |
| AjiI | CACGTC | 1 cut(s) | 148 |
| AjnI | CCWGG | 2 cut(s) | 135, 630 |
| Alw21I | GWGCWC | 2 cut(s) | 15, 841 |
| Alw44I | GTGCAC | 1 cut(s) | 837 |
| AlwI | GGATC | 5 cut(s) | 95, 347, 360, 699, 856 |
| AoxI | GGCC | 1 cut(s) | 96 |
| ApaLI | GTGCAC | 1 cut(s) | 837 |
| ApeKI | GCWGC | 4 cut(s) | 542, 1115, 1293, 1327 |
| ApoI | RAATTY | 2 cut(s) | 599, 644 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 113 |
| AspLEI | GCGC | 2 cut(s) | 55, 94 |
| AspS9I | GGNCC | 2 cut(s) | 139, 188 |
| AsuHPI | GGTGA | 4 cut(s) | 142, 406, 789, 1060 |
| AvaII | GGWCC | 2 cut(s) | 139, 188 |
| BaeGI | GKGCMC | 2 cut(s) | 841, 1024 |
| BamHI | GGATCC | 1 cut(s) | 352 |
| BanI | GGYRCC | 1 cut(s) | 91 |
| BanII | GRGCYC | 2 cut(s) | 15, 877 |
| Bbv12I | GWGCWC | 2 cut(s) | 15, 841 |
| BbvI | GCAGC | 4 cut(s) | 529, 1102, 1280, 1314 |
| BccI | CCATC | 2 cut(s) | 200, 1052 |
| BceAI | ACGGC | 2 cut(s) | 198, 262 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1033, 1067 |
| BciT130I | CCWGG | 2 cut(s) | 137, 632 |
| BciVI | GTATCC | 1 cut(s) | 615 |
| BfaI | CTAG | 1 cut(s) | 977 |
| BfmI | CTRYAG | 1 cut(s) | 1269 |
| BfoI | RGCGCY | 2 cut(s) | 56, 95 |
| BfuI | GTATCC | 1 cut(s) | 615 |
| BglII | AGATCT | 1 cut(s) | 1150 |
| BisI | GCNGC | 6 cut(s) | 6, 38, 543, 1116, 1294, 1328 |
| BlsI | GCNGC | 6 cut(s) | 7, 39, 544, 1117, 1295, 1329 |
| Bme1390I | CCNGG | 2 cut(s) | 137, 632 |
| Bme18I | GGWCC | 2 cut(s) | 139, 188 |
| BmgBI | CACGTC | 1 cut(s) | 148 |
| BmgT120I | GGNCC | 2 cut(s) | 139, 188 |
| BmiI | GGNNCC | 4 cut(s) | 93, 141, 190, 354 |
| BmrFI | CCNGG | 2 cut(s) | 137, 632 |
| BmrI | ACTGGG | 1 cut(s) | 26 |
| BmsI | GCATC | 3 cut(s) | 287, 1041, 1187 |
| BmuI | ACTGGG | 1 cut(s) | 26 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 695, 727 |
| BpuEI | CTTGAG | 1 cut(s) | 968 |
| BsaHI | GRCGYC | 1 cut(s) | 92 |
| BsaJI | CCNNGG | 4 cut(s) | 282, 362, 630, 1024 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 209, 239, 484, 514 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 363, 1196 |
| Bse118I | RCCGGY | 1 cut(s) | 94 |
| Bse1I | ACTGG | 3 cut(s) | 32, 376, 514 |
| BseBI | CCWGG | 2 cut(s) | 137, 632 |
| BseDI | CCNNGG | 4 cut(s) | 282, 362, 630, 1024 |
| BseGI | GGATG | 5 cut(s) | 278, 640, 679, 757, 1074 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 363, 1196 |
| BseMII | CTCAG | 8 cut(s) | 30, 96, 300, 678, 728, 879, 1141, 1245 |
| BseNI | ACTGG | 3 cut(s) | 32, 376, 514 |
| BseRI | GAGGAG | 2 cut(s) | 155, 505 |
| BseSI | GKGCMC | 2 cut(s) | 841, 1024 |
| BseX3I | CGGCCG | 1 cut(s) | 96 |
| BseXI | GCAGC | 4 cut(s) | 529, 1102, 1280, 1314 |
| BseYI | CCCAGC | 1 cut(s) | 844 |
| Bsh1285I | CGRYCG | 2 cut(s) | 86, 99 |
| BshFI | GGCC | 1 cut(s) | 98 |
| BshNI | GGYRCC | 1 cut(s) | 91 |
| BsiEI | CGRYCG | 2 cut(s) | 86, 99 |
| BsiHKAI | GWGCWC | 2 cut(s) | 15, 841 |
| BsiSI | CCGG | 2 cut(s) | 95, 228 |
| BslFI | GGGAC | 3 cut(s) | 174, 220, 466 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 363, 1196 |
| BsmFI | GGGAC | 3 cut(s) | 174, 220, 466 |
| BsnI | GGCC | 1 cut(s) | 98 |
| Bsp1286I | GDGCHC | 4 cut(s) | 15, 841, 877, 1024 |
| Bsp143I | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| BspACI | CCGC | 5 cut(s) | 5, 38, 65, 86, 241 |
| BspANI | GGCC | 1 cut(s) | 98 |
| BspCNI | CTCAG | 8 cut(s) | 29, 97, 301, 679, 727, 880, 1140, 1244 |
| BspHI | TCATGA | 1 cut(s) | 744 |
| BspLI | GGNNCC | 4 cut(s) | 93, 141, 190, 354 |
| BspPI | GGATC | 5 cut(s) | 95, 347, 360, 699, 856 |
| BspT107I | GGYRCC | 1 cut(s) | 91 |
| BsrFI | RCCGGY | 1 cut(s) | 94 |
| BsrI | ACTGG | 3 cut(s) | 32, 376, 514 |
| BssAI | RCCGGY | 1 cut(s) | 94 |
| BssECI | CCNNGG | 4 cut(s) | 282, 362, 630, 1024 |
| BssMI | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| BssNI | GRCGYC | 1 cut(s) | 92 |
| BssT1I | CCWWGG | 3 cut(s) | 282, 362, 1024 |
| Bst2UI | CCWGG | 2 cut(s) | 137, 632 |
| Bst4CI | ACNGT | 4 cut(s) | 73, 79, 932, 1142 |
| Bst6I | CTCTTC | 3 cut(s) | 798, 1110, 1326 |
| BstACI | GRCGYC | 1 cut(s) | 92 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 96 |
| BstDEI | CTNAG | 9 cut(s) | 16, 105, 309, 687, 714, 810, 888, 1127, 1231 |
| BstF5I | GGATG | 5 cut(s) | 278, 640, 679, 757, 1074 |
| BstH2I | RGCGCY | 2 cut(s) | 56, 95 |
| BstHHI | GCGC | 2 cut(s) | 55, 94 |
| BstKTI | GATC | 6 cut(s) | 103, 355, 694, 851, 1153, 1291 |
| BstMBI | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| BstMCI | CGRYCG | 2 cut(s) | 86, 99 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 284, 542, 551, 815, 1121 |
| BstNI | CCWGG | 2 cut(s) | 137, 632 |
| BstNSI | RCATGY | 2 cut(s) | 439, 683 |
| BstSCI | CCNGG | 2 cut(s) | 135, 630 |
| BstSFI | CTRYAG | 1 cut(s) | 1269 |
| BstSLI | GKGCMC | 2 cut(s) | 841, 1024 |
| BstV1I | GCAGC | 4 cut(s) | 529, 1102, 1280, 1314 |
| BstX2I | RGATCY | 3 cut(s) | 352, 691, 1150 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 289 |
| BstYI | RGATCY | 3 cut(s) | 352, 691, 1150 |
| BstZI | CGGCCG | 1 cut(s) | 96 |
| BsuI | GTATCC | 1 cut(s) | 615 |
| BsuRI | GGCC | 1 cut(s) | 98 |
| BtgZI | GCGATG | 1 cut(s) | 178 |
| BtrI | CACGTC | 1 cut(s) | 148 |
| BtsCI | GGATG | 5 cut(s) | 278, 640, 679, 757, 1074 |
| BtsI | GCAGTG | 1 cut(s) | 839 |
| BtsIMutI | CAGTG | 5 cut(s) | 39, 84, 306, 839, 1024 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 96 |
| CciI | TCATGA | 1 cut(s) | 744 |
| CfoI | GCGC | 2 cut(s) | 55, 94 |
| Cfr10I | RCCGGY | 1 cut(s) | 94 |
| Cfr13I | GGNCC | 2 cut(s) | 139, 188 |
| Csp6I | GTAC | 1 cut(s) | 718 |
| CviAII | CATG | 4 cut(s) | 328, 436, 680, 745 |
| CviQI | GTAC | 1 cut(s) | 718 |
| DdeI | CTNAG | 9 cut(s) | 16, 105, 309, 687, 714, 810, 888, 1127, 1231 |
| DinI | GGCGCC | 1 cut(s) | 93 |
| DpnI | GATC | 6 cut(s) | 102, 354, 693, 850, 1152, 1290 |
| DpnII | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| DraI | TTTAAA | 1 cut(s) | 906 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 146 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 146 |
| EaeI | YGGCCR | 1 cut(s) | 96 |
| EagI | CGGCCG | 1 cut(s) | 96 |
| Eam1104I | CTCTTC | 3 cut(s) | 798, 1110, 1326 |
| EarI | CTCTTC | 3 cut(s) | 798, 1110, 1326 |
| Ecl136II | GAGCTC | 1 cut(s) | 13 |
| EclXI | CGGCCG | 1 cut(s) | 96 |
| Eco130I | CCWWGG | 3 cut(s) | 282, 362, 1024 |
| Eco24I | GRGCYC | 2 cut(s) | 15, 877 |
| Eco47I | GGWCC | 2 cut(s) | 139, 188 |
| Eco52I | CGGCCG | 1 cut(s) | 96 |
| Eco53kI | GAGCTC | 1 cut(s) | 13 |
| Eco57I | CTGAAG | 1 cut(s) | 1307 |
| EcoICRI | GAGCTC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 2 cut(s) | 135, 630 |
| EcoT14I | CCWWGG | 3 cut(s) | 282, 362, 1024 |
| EcoT38I | GRGCYC | 2 cut(s) | 15, 877 |
| EgeI | GGCGCC | 1 cut(s) | 93 |
| EheI | GGCGCC | 1 cut(s) | 93 |
| ErhI | CCWWGG | 3 cut(s) | 282, 362, 1024 |
| FaeI | CATG | 4 cut(s) | 331, 439, 683, 748 |
| FaqI | GGGAC | 3 cut(s) | 174, 220, 466 |
| FatI | CATG | 4 cut(s) | 327, 435, 679, 744 |
| FblI | GTMKAC | 1 cut(s) | 953 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 38, 543, 1116, 1294, 1328 |
| FokI | GGATG | 5 cut(s) | 265, 647, 686, 764, 1081 |
| FriOI | GRGCYC | 2 cut(s) | 15, 877 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 38, 543, 1116, 1294, 1328 |
| FspBI | CTAG | 1 cut(s) | 977 |
| GlaI | GCGC | 2 cut(s) | 54, 93 |
| GluI | GCNGC | 6 cut(s) | 6, 38, 543, 1116, 1294, 1328 |
| GsaI | CCCAGC | 1 cut(s) | 848 |
| HaeII | RGCGCY | 2 cut(s) | 56, 95 |
| HaeIII | GGCC | 1 cut(s) | 98 |
| HapII | CCGG | 2 cut(s) | 95, 228 |
| HhaI | GCGC | 2 cut(s) | 55, 94 |
| Hin1I | GRCGYC | 1 cut(s) | 92 |
| Hin1II | CATG | 4 cut(s) | 331, 439, 683, 748 |
| Hin6I | GCGC | 2 cut(s) | 53, 92 |
| HinP1I | GCGC | 2 cut(s) | 53, 92 |
| HincII | GTYRAC | 2 cut(s) | 256, 787 |
| HindII | GTYRAC | 2 cut(s) | 256, 787 |
| HindIII | AAGCTT | 1 cut(s) | 899 |
| HpaI | GTTAAC | 1 cut(s) | 787 |
| HpaII | CCGG | 2 cut(s) | 95, 228 |
| HphI | GGTGA | 4 cut(s) | 142, 406, 789, 1060 |
| Hpy166II | GTNNAC | 5 cut(s) | 256, 787, 839, 954, 1145 |
| Hpy188I | TCNGA | 5 cut(s) | 19, 300, 348, 936, 1213 |
| Hpy188III | TCNNGA | 6 cut(s) | 104, 671, 701, 745, 1109, 1233 |
| Hpy8I | GTNNAC | 5 cut(s) | 256, 787, 839, 954, 1145 |
| Hpy99I | CGWCG | 2 cut(s) | 158, 161 |
| HpyAV | CCTTC | 5 cut(s) | 742, 808, 864, 1039, 1241 |
| HpyCH4III | ACNGT | 4 cut(s) | 73, 79, 932, 1142 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpyCH4V | TGCA | 7 cut(s) | 430, 468, 839, 1118, 1178, 1296, 1306 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 284, 542, 551, 815, 1121 |
| HpyF3I | CTNAG | 9 cut(s) | 16, 105, 309, 687, 714, 810, 888, 1127, 1231 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| Hsp92I | GRCGYC | 1 cut(s) | 92 |
| Hsp92II | CATG | 4 cut(s) | 331, 439, 683, 748 |
| HspAI | GCGC | 2 cut(s) | 53, 92 |
| KasI | GGCGCC | 1 cut(s) | 91 |
| KroI | GCCGGC | 1 cut(s) | 94 |
| KroNI | GCCGGC | 1 cut(s) | 96 |
| KspAI | GTTAAC | 1 cut(s) | 787 |
| Kzo9I | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| LmnI | GCTCC | 2 cut(s) | 492, 1235 |
| Lsp1109I | GCAGC | 4 cut(s) | 529, 1102, 1280, 1314 |
| LweI | GCATC | 3 cut(s) | 287, 1041, 1187 |
| MaeI | CTAG | 1 cut(s) | 977 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MaeIII | GTNAC | 5 cut(s) | 73, 148, 215, 682, 795 |
| MalI | GATC | 6 cut(s) | 102, 354, 693, 850, 1152, 1290 |
| MboI | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| MboII | GAAGA | 9 cut(s) | 406, 592, 619, 815, 1042, 1097, 1263, 1298, 1313 |
| MflI | RGATCY | 3 cut(s) | 352, 691, 1150 |
| MhlI | GDGCHC | 4 cut(s) | 15, 841, 877, 1024 |
| MluCI | AATT | 4 cut(s) | 112, 599, 644, 1001 |
| Mly113I | GGCGCC | 1 cut(s) | 92 |
| MlyI | GAGTC | 4 cut(s) | 212, 242, 803, 959 |
| MroNI | GCCGGC | 1 cut(s) | 94 |
| MroXI | GAANNNNTTC | 1 cut(s) | 113 |
| MseI | TTAA | 6 cut(s) | 573, 786, 905, 969, 1137, 1185 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1017 |
| MspA1I | CMGCKG | 1 cut(s) | 1327 |
| MspI | CCGG | 2 cut(s) | 95, 228 |
| MspR9I | CCNGG | 2 cut(s) | 137, 632 |
| MvaI | CCWGG | 2 cut(s) | 137, 632 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 284, 542, 551, 815, 1121 |
| NaeI | GCCGGC | 1 cut(s) | 96 |
| NarI | GGCGCC | 1 cut(s) | 92 |
| NdeII | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| NgoMIV | GCCGGC | 1 cut(s) | 94 |
| NlaIII | CATG | 4 cut(s) | 331, 439, 683, 748 |
| NlaIV | GGNNCC | 4 cut(s) | 93, 141, 190, 354 |
| NmuCI | GTSAC | 3 cut(s) | 148, 215, 795 |
| NspI | RCATGY | 2 cut(s) | 439, 683 |
| PagI | TCATGA | 1 cut(s) | 744 |
| PciI | ACATGT | 2 cut(s) | 435, 679 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 153 |
| PdiI | GCCGGC | 1 cut(s) | 96 |
| PdmI | GAANNNNTTC | 1 cut(s) | 113 |
| PfeI | GAWTC | 7 cut(s) | 530, 638, 652, 958, 973, 983, 1033 |
| PkrI | GCNGC | 6 cut(s) | 7, 39, 544, 1117, 1295, 1329 |
| PleI | GAGTC | 4 cut(s) | 212, 241, 802, 958 |
| PluTI | GGCGCC | 1 cut(s) | 95 |
| PpsI | GAGTC | 4 cut(s) | 212, 241, 802, 958 |
| PscI | ACATGT | 2 cut(s) | 435, 679 |
| Psp124BI | GAGCTC | 1 cut(s) | 15 |
| Psp6I | CCWGG | 2 cut(s) | 135, 630 |
| PspFI | CCCAGC | 1 cut(s) | 844 |
| PspGI | CCWGG | 2 cut(s) | 135, 630 |
| PspN4I | GGNNCC | 4 cut(s) | 93, 141, 190, 354 |
| PspPI | GGNCC | 2 cut(s) | 139, 188 |
| PsuI | RGATCY | 3 cut(s) | 352, 691, 1150 |
| PvuII | CAGCTG | 1 cut(s) | 1327 |
| RsaI | GTAC | 1 cut(s) | 719 |
| RsaNI | GTAC | 1 cut(s) | 718 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1017 |
| SacI | GAGCTC | 1 cut(s) | 15 |
| SaqAI | TTAA | 6 cut(s) | 573, 786, 905, 969, 1137, 1185 |
| SatI | GCNGC | 6 cut(s) | 6, 38, 543, 1116, 1294, 1328 |
| Sau3AI | GATC | 6 cut(s) | 100, 352, 691, 848, 1150, 1288 |
| Sau96I | GGNCC | 2 cut(s) | 139, 188 |
| SchI | GAGTC | 4 cut(s) | 212, 242, 803, 959 |
| ScrFI | CCNGG | 2 cut(s) | 137, 632 |
| SduI | GDGCHC | 4 cut(s) | 15, 841, 877, 1024 |
| SfaNI | GCATC | 3 cut(s) | 287, 1041, 1187 |
| SfcI | CTRYAG | 1 cut(s) | 1269 |
| SfoI | GGCGCC | 1 cut(s) | 93 |
| SinI | GGWCC | 2 cut(s) | 139, 188 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1017 |
| SmlI | CTYRAG | 1 cut(s) | 947 |
| SmoI | CTYRAG | 1 cut(s) | 947 |
| Sse9I | AATT | 4 cut(s) | 112, 599, 644, 1001 |
| SsiI | CCGC | 5 cut(s) | 5, 38, 65, 86, 241 |
| SspDI | GGCGCC | 1 cut(s) | 91 |
| SspMI | CTAG | 1 cut(s) | 977 |
| SstI | GAGCTC | 1 cut(s) | 15 |
| StyD4I | CCNGG | 2 cut(s) | 135, 630 |
| StyI | CCWWGG | 3 cut(s) | 282, 362, 1024 |
| TaaI | ACNGT | 4 cut(s) | 73, 79, 932, 1142 |
| TaiI | ACGT | 1 cut(s) | 150 |
| TaqI | TCGA | 2 cut(s) | 596, 700 |
| TaqII | GACCGA | 1 cut(s) | 176 |
| TasI | AATT | 4 cut(s) | 112, 599, 644, 1001 |
| TauI | GCSGC | 2 cut(s) | 8, 40 |
| TfiI | GAWTC | 7 cut(s) | 530, 638, 652, 958, 973, 983, 1033 |
| Tru1I | TTAA | 6 cut(s) | 573, 786, 905, 969, 1137, 1185 |
| Tru9I | TTAA | 6 cut(s) | 573, 786, 905, 969, 1137, 1185 |
| TscAI | CASTG | 5 cut(s) | 39, 84, 313, 846, 1024 |
| TseFI | GTSAC | 3 cut(s) | 148, 215, 795 |
| TseI | GCWGC | 4 cut(s) | 542, 1115, 1293, 1327 |
| Tsp45I | GTSAC | 3 cut(s) | 148, 215, 795 |
| TspDTI | ATGAA | 6 cut(s) | 172, 651, 690, 719, 761, 845 |
| TspGWI | ACGGA | 3 cut(s) | 190, 194, 735 |
| TspRI | CASTG | 5 cut(s) | 39, 84, 313, 846, 1024 |
| VneI | GTGCAC | 1 cut(s) | 837 |
| VpaK11BI | GGWCC | 2 cut(s) | 139, 188 |
| XapI | RAATTY | 2 cut(s) | 599, 644 |
| XceI | RCATGY | 2 cut(s) | 439, 683 |
| XmiI | GTMKAC | 1 cut(s) | 953 |
| XmnI | GAANNNNTTC | 1 cut(s) | 113 |
| XspI | CTAG | 1 cut(s) | 977 |