Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0019631

Physical Location & Seq

Genomic Coordinates Reverse (-)

20959154 .. 20962281

Gene Structure 3128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1180400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGCGGCAGAGCTGTCAGACCCTGAAACACCAATGCCGCTACCGCCACCACCACCACTACTGCCGACGCTACCAGTACGGCCGCCGGCGCCGGTCGATCCTGAGATATTCTCTCTGTATGTGGGCGACCTGGACCCACAGGTCACCGAGGAAGACCTCCTCGCTACTTTTCGTTTCATGGGTCCCATCGCCTCCGTCCGTCTCTGCCGTGACTCCCACTCCGGCGAGTCCCTCCGCTACGGCTATGTCAACTTCTACTCCCACTCCCACGGTAACCAAAAACCCCACCGCCTCTCTCTCTTCTTTTCTGTCAACAATGGTAGCTCTGGTTCCCTGTATATCTCTCTGGAATTCTTGCTTAGTGGAGAAAATATTTTCAATTTCGAGAAAATGGGTTTCTGGTGGTTCTGTTTCTTGGGCTTAAGAATGTGTTTCTTGGGTTTAATTTGGGATTTTCGTACTCCATTTTTCTTAATTGGGATTTTGGTGCTCTTAATTTCTTCTCCTCTGTTATCACGTATGATTTTTCGGTTAGATTTGTTGATGTTTTTGTTACTTTATCTGTGTGATATCCATATGTTTTCGATCTTTGATGTTTTCGGTCTGTTTTGGTCAGCATCCAAGGCTATGGCTTGTCTGAATCACACTGAGCTGAAAGGGAAAACCATGAGAATAATGTGGTCTCAGAGGGATTCTGTTCCAAGGAAAACTGGTCTTGGCAATGTCTTTGTGAAGAACCTTGACCCTGAAATCACCAGCACTCACTTGCAGGACATGTTCGGGGAATTCGGGACTATACTTTCTTGCAAGGTAGCCGAACAAAATGGGAAGAGCAAGGGTTTCGGGTTTGTCCTGTTTGACAAAGAGGAATCGGCTGTGGCTGCTGTCAATGCTCTCAATGATACAATCATTAAGGGGAAGAAGCTATATGTGTCGAAATTTGTTAAGAAAAGTGACAGGATACCAGCCCAGAATGAATCCAAATTTACAAATCTGTTTGTGAAGAATCTTGATGAACATGTAACTGAGGATCTGCTTCGAGAGATGTTCTCTCGGTACGGAAGTGTTTATAGTCTTGCCATCATGAAGGATGAGAAAGGGAAGTCAAAAGGTTTTGGGTTTGCTAACTTTGAGTCGCCAGAAGAGGCTAAGAAGGCTGTTGAGGGCATGAATGGTGCACTGCTGGGATCAAAACATTTGTTTGTAGGAAGGGCTCAAAAGAAAGCTGAGAGGGAAAAGTTTCTAAAATGTAAAGAGGAAATGCTGAACAGTGAGATCGAGAAACTTAAGTCTATGAATCTCTATGTTAAGAATTTAGCTGAATCTGTTGATGATAGCAAATTAGGAGAACATTGCAGTGCCTTTGGGAAGATTCTGTCTGCCAAAGTGATGCGTGATGGTAACGGGATGAGCAGAGGTTTTGGTTTTGTTTGCTTCTCAACTCTTCAAGAAGCTGCCAAAGCTCTCAGTAATCTTAATGGAGCTATGTTGGAAGGAAGAAAACTTTATGTGGCTGTAGCTCAAAGCAAAGAAGATCGCTGCAAGGCTATGCAAGATTACTATACTCTTCAGCTGCCACAAAGATCTTTGCAATCTCCAAACTGGCCTGCCCTGCACCCGGTCCAGTATAGCGTTTCCCCAAGGCCACCTACAGCTCCTCTGCTATGCCCGCCAGTCATGTATCAAAGTTTTGGTACTAATGTCGTTGCGGATTATCCTTTTGTTCTAAGCAGAGAATCACAGTTGGGTAGCAGCAATGGAAATGATAATTTCCAGAATAAGTCCAGGACATATGCTAACTCAAATGTTCATACCAACTCTGGGAACCATGGAGGTTATGAAGCTACAGGATACCGGAAGAAGGTTTACAGACAGAGTGGAGCCACTGCAGGAAGTTCAAGATCAGCAACTACAGGAGGCAGAGTTCTTCTTACAGAAGCATCATCCACTGGAAACTCCAACTTGAAGACAACTCCAAGGGATCGGCGCCACTCTTTTGCTGAGAATCTTGAGCCTGGGCGTGCAGTACAGATAACAGGAACGTCGGGAATGCTGTGGGAGTTGAACAGTTCTGAGAAAGCAGCAGCTCAAGTTTTGAAGGTGGCAAATGGTACCAGGACCAGCGCAGATCATCACCCTGTGTTTGCTAAGTCTGGCCGCTACTTGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003682 GO:0003723 GO:0003727 GO:0004857 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005840 GO:0006139 GO:0006412 GO:0006413 GO:0006417 GO:0006446 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0008428 GO:0009058 GO:0009059 GO:0009889 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010494 GO:0010556 GO:0010608 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0030234 GO:0031323 GO:0031326 GO:0031329 GO:0032268 GO:0032991 GO:0034236 GO:0034248 GO:0034641 GO:0034645 GO:0035770 GO:0036464 GO:0043043 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050790 GO:0050794 GO:0051018 GO:0051171 GO:0051246 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0065009 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0098772 GO:1900151 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1903311 GO:1990841 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

RRM_1

Protein Analysis

724

Amino Acids

80.42

Weight (kDa)

9.06

Isoelectric Point (pI)

35.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	39 - 88	1.1e-09	RNA recognition motif
RRM_1	PF00076	242 - 309	1.8e-19	RNA recognition motif
RRM_1	PF00076	332 - 399	9.8e-21	RNA recognition motif
RRM_1	PF00076	434 - 502	1.7e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0019631)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16380
malus_domestica	MD09G1199800.v1.1 MD17G1180400.v1.1
prunus_persica	Prupe.3G056300_v2.0.a1 Prupe.3G056300_v2.0.a1
pyrus_communis	pycom09g11700 pycom17g18970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	140
Acc65I	GGTACC	1 cut(s)	2111
AccB1I	GGYRCC	3 cut(s)	88, 1986, 2111
AciI	CCGC	9 cut(s)	5, 38, 44, 83, 235, 289, 1670, 1709, 2158
AclWI	GGATC	4 cut(s)	92, 1038, 1195, 1989
AcoI	YGGCCR	2 cut(s)	80, 2155
AcsI	RAATTY	5 cut(s)	350, 785, 938, 983, 1312
AcuI	CTGAAG	1 cut(s)	1553
AcyI	GRCGYC	2 cut(s)	89, 1987
AdeI	CACNNNGTG	1 cut(s)	2140
AfaI	GTAC	6 cut(s)	78, 460, 1058, 1696, 2028, 2113
AfiI	CCNNNNNNNGG	3 cut(s)	1618, 1821, 1861
AflII	CTTAAG	2 cut(s)	421, 1286
AflIII	ACRYGT	2 cut(s)	774, 1018
AgsI	TTSAA	6 cut(s)	379, 1448, 1899, 1966, 2065, 2098
AjnI	CCWGG	4 cut(s)	129, 1784, 2014, 2114
AloI	GAACNNNNNNTCC	2 cut(s)	1908, 1940
Alw21I	GWGCWC	2 cut(s)	492, 1180
Alw26I	GTCTC	2 cut(s)	206, 687
Alw44I	GTGCAC	1 cut(s)	1176
AlwI	GGATC	4 cut(s)	92, 1038, 1195, 1989
AlwNI	CAGNNNCTG	1 cut(s)	23
AoxI	GGCC	4 cut(s)	80, 1604, 1643, 2155
ApaLI	GTGCAC	1 cut(s)	1176
ApeKI	GCWGC	7 cut(s)	881, 1454, 1539, 1573, 1752, 2081, 2084
ApoI	RAATTY	5 cut(s)	350, 785, 938, 983, 1312
Asp700I	GAANNNNTTC	1 cut(s)	1239
Asp718I	GGTACC	1 cut(s)	2111
AspLEI	GCGC	3 cut(s)	91, 1989, 2126
AspS9I	GGNCC	4 cut(s)	133, 182, 1621, 2118
AsuC2I	CCSGG	1 cut(s)	1619
AsuHPI	GGTGA	3 cut(s)	136, 745, 2126
AvaII	GGWCC	4 cut(s)	133, 182, 1621, 2118
BaeGI	GKGCMC	1 cut(s)	1180
BaeI	ACNNNNGTAYC	4 cut(s)	1048, 1081, 1686, 1719
BanI	GGYRCC	3 cut(s)	88, 1986, 2111
BanII	GRGCYC	1 cut(s)	1216
BarI	GAAGNNNNNNTAC	2 cut(s)	1850, 1882
BbsI	GAAGAC	2 cut(s)	159, 1973
Bbv12I	GWGCWC	2 cut(s)	492, 1180
BbvI	GCAGC	7 cut(s)	868, 1441, 1526, 1560, 1764, 2093, 2096
BccI	CCATC	3 cut(s)	194, 1088, 1391
BceAI	ACGGC	3 cut(s)	95, 192, 256
BcgI	CGANNNNNNTGC	2 cut(s)	823, 857
BciT130I	CCWGG	4 cut(s)	131, 1786, 2016, 2116
BciVI	GTATCC	2 cut(s)	954, 1844
BcnI	CCSGG	1 cut(s)	1619
BcoDI	GTCTC	2 cut(s)	206, 687
BfmI	CTRYAG	5 cut(s)	1515, 1650, 1845, 1887, 1911
BfoI	RGCGCY	2 cut(s)	92, 1990
BfrI	CTTAAG	2 cut(s)	421, 1286
BfuI	GTATCC	2 cut(s)	954, 1844
BglII	AGATCT	1 cut(s)	1583
Bme1390I	CCNGG	5 cut(s)	131, 1619, 1786, 2016, 2116
Bme18I	GGWCC	4 cut(s)	133, 182, 1621, 2118
BmgT120I	GGNCC	4 cut(s)	133, 182, 1621, 2118
BmiI	GGNNCC	9 cut(s)	90, 135, 183, 184, 331, 1826, 1882, 1988, 2113
BmrFI	CCNGG	5 cut(s)	131, 1619, 1786, 2016, 2116
BmsI	GCATC	3 cut(s)	626, 1380, 1949
BpiI	GAAGAC	2 cut(s)	159, 1973
BplI	GAGNNNNNCTC	4 cut(s)	95, 127, 1034, 1066
BpuEI	CTTGAG	2 cut(s)	2030, 2073
BpuMI	CCSGG	1 cut(s)	1619
BsaAI	YACGTR	1 cut(s)	518
BsaHI	GRCGYC	2 cut(s)	89, 1987
BsaI	GGTCTC	1 cut(s)	687
BsaJI	CCNNGG	8 cut(s)	147, 268, 621, 701, 1640, 1828, 1976, 2015
BsaWI	WCCGGW	1 cut(s)	1854
BsaXI	ACNNNNNCTCC	8 cut(s)	203, 233, 242, 248, 272, 278, 1908, 1938
Bsc4I	CCNNNNNNNGG	3 cut(s)	1618, 1821, 1861
Bse118I	RCCGGY	2 cut(s)	85, 91
Bse1I	ACTGG	6 cut(s)	74, 715, 1607, 1624, 1673, 1954
Bse3DI	GCAATG	3 cut(s)	727, 1351, 1762
BseBI	CCWGG	4 cut(s)	131, 1786, 2016, 2116
BseDI	CCNNGG	8 cut(s)	147, 268, 621, 701, 1640, 1828, 1976, 2015
BseGI	GGATG	4 cut(s)	617, 1096, 1413, 1943
BseLI	CCNNNNNNNGG	3 cut(s)	1618, 1821, 1861
BseMI	GCAATG	3 cut(s)	727, 1351, 1762
BseMII	CTCAG	8 cut(s)	93, 639, 698, 1017, 1218, 1480, 1992, 2064
BseNI	ACTGG	6 cut(s)	74, 715, 1607, 1624, 1673, 1954
BseRI	GAGGAG	3 cut(s)	149, 495, 1647
BseSI	GKGCMC	1 cut(s)	1180
BseX3I	CGGCCG	1 cut(s)	80
BseXI	GCAGC	7 cut(s)	868, 1441, 1526, 1560, 1764, 2093, 2096
BseYI	CCCAGC	1 cut(s)	1183
BsgI	GTGCAG	2 cut(s)	1598, 2043
Bsh1285I	CGRYCG	2 cut(s)	83, 96
BshFI	GGCC	4 cut(s)	82, 1606, 1645, 2157
BshNI	GGYRCC	3 cut(s)	88, 1986, 2111
BsiEI	CGRYCG	2 cut(s)	83, 96
BsiHKAI	GWGCWC	2 cut(s)	492, 1180
BsiSI	CCGG	5 cut(s)	86, 92, 222, 1619, 1855
BslFI	GGGAC	3 cut(s)	168, 214, 805
BslI	CCNNNNNNNGG	3 cut(s)	1618, 1821, 1861
BsmAI	GTCTC	2 cut(s)	206, 687
BsmBI	CGTCTC	1 cut(s)	206
BsmFI	GGGAC	3 cut(s)	168, 214, 805
BsmI	GAATGC	1 cut(s)	2055
BsnI	GGCC	4 cut(s)	82, 1606, 1645, 2157
Bso31I	GGTCTC	1 cut(s)	687
Bsp1286I	GDGCHC	3 cut(s)	492, 1180, 1216
Bsp19I	CCATGG	1 cut(s)	1828
BspACI	CCGC	9 cut(s)	5, 38, 44, 83, 235, 289, 1670, 1709, 2158
BspANI	GGCC	4 cut(s)	82, 1606, 1645, 2157
BspCNI	CTCAG	8 cut(s)	94, 640, 697, 1018, 1219, 1479, 1993, 2065
BspHI	TCATGA	1 cut(s)	1083
BspLI	GGNNCC	9 cut(s)	90, 135, 183, 184, 331, 1826, 1882, 1988, 2113
BspMAI	CTGCAG	1 cut(s)	1891
BspPI	GGATC	4 cut(s)	92, 1038, 1195, 1989
BspQI	GCTCTTC	1 cut(s)	824
BspT107I	GGYRCC	3 cut(s)	88, 1986, 2111
BspTI	CTTAAG	2 cut(s)	421, 1286
BspTNI	GGTCTC	1 cut(s)	687
BsrDI	GCAATG	3 cut(s)	727, 1351, 1762
BsrFI	RCCGGY	2 cut(s)	85, 91
BsrI	ACTGG	6 cut(s)	74, 715, 1607, 1624, 1673, 1954
BssAI	RCCGGY	2 cut(s)	85, 91
BssECI	CCNNGG	8 cut(s)	147, 268, 621, 701, 1640, 1828, 1976, 2015
BssNI	GRCGYC	2 cut(s)	89, 1987
BssT1I	CCWWGG	5 cut(s)	621, 701, 1640, 1828, 1976
Bst2UI	CCWGG	4 cut(s)	131, 1786, 2016, 2116
Bst4CI	ACNGT	4 cut(s)	272, 1271, 1743, 2069
Bst6I	CTCTTC	5 cut(s)	305, 824, 1137, 1449, 1572
BstACI	GRCGYC	2 cut(s)	89, 1987
BstAFI	CTTAAG	2 cut(s)	421, 1286
BstBAI	YACGTR	1 cut(s)	518
BstC8I	GCNNGC	4 cut(s)	87, 1608, 1670, 2022
BstDSI	CCRYGG	2 cut(s)	268, 1828
BstEII	GGTNACC	2 cut(s)	142, 272
BstF5I	GGATG	4 cut(s)	617, 1096, 1413, 1943
BstH2I	RGCGCY	2 cut(s)	92, 1990
BstHHI	GCGC	3 cut(s)	91, 1989, 2126
BstMAI	GTCTC	2 cut(s)	206, 687
BstMCI	CGRYCG	2 cut(s)	83, 96
BstNI	CCWGG	4 cut(s)	131, 1786, 2016, 2116
BstNSI	RCATGY	2 cut(s)	778, 1022
BstPI	GGTNACC	2 cut(s)	142, 272
BstSCI	CCNGG	5 cut(s)	129, 1617, 1784, 2014, 2114
BstSFI	CTRYAG	5 cut(s)	1515, 1650, 1845, 1887, 1911
BstSLI	GKGCMC	1 cut(s)	1180
BstV1I	GCAGC	7 cut(s)	868, 1441, 1526, 1560, 1764, 2093, 2096
BstV2I	GAAGAC	2 cut(s)	159, 1973
BstX2I	RGATCY	2 cut(s)	1030, 1583
BstXI	CCANNNNNNTGG	1 cut(s)	628
BstYI	RGATCY	2 cut(s)	1030, 1583
BstZI	CGGCCG	1 cut(s)	80
BsuI	GTATCC	2 cut(s)	954, 1844
BsuRI	GGCC	4 cut(s)	82, 1606, 1645, 2157
BtgI	CCRYGG	2 cut(s)	268, 1828
BtgZI	GCGATG	1 cut(s)	172
BtsCI	GGATG	4 cut(s)	617, 1096, 1413, 1943
BtsI	GCAGTG	3 cut(s)	1178, 1363, 1884
BtsIMutI	CAGTG	6 cut(s)	645, 1178, 1276, 1363, 1884, 1947
Cac8I	GCNNGC	4 cut(s)	87, 1608, 1670, 2022
CaiI	CAGNNNCTG	1 cut(s)	23
CciI	TCATGA	1 cut(s)	1083
CfoI	GCGC	3 cut(s)	91, 1989, 2126
Cfr10I	RCCGGY	2 cut(s)	85, 91
Cfr13I	GGNCC	4 cut(s)	133, 182, 1621, 2118
CseI	GACGC	1 cut(s)	76
Csp6I	GTAC	6 cut(s)	77, 459, 1057, 1695, 2027, 2112
CviAII	CATG	8 cut(s)	178, 667, 775, 1019, 1084, 1168, 1678, 1829
CviQI	GTAC	6 cut(s)	77, 459, 1057, 1695, 2027, 2112
DinI	GGCGCC	2 cut(s)	90, 1988
DraIII	CACNNNGTG	1 cut(s)	2140
DrdI	GACNNNNNNGTC	1 cut(s)	140
DseDI	GACNNNNNNGTC	1 cut(s)	140
EaeI	YGGCCR	2 cut(s)	80, 2155
EagI	CGGCCG	1 cut(s)	80
Eam1104I	CTCTTC	5 cut(s)	305, 824, 1137, 1449, 1572
EarI	CTCTTC	5 cut(s)	305, 824, 1137, 1449, 1572
EclXI	CGGCCG	1 cut(s)	80
Eco130I	CCWWGG	5 cut(s)	621, 701, 1640, 1828, 1976
Eco24I	GRGCYC	1 cut(s)	1216
Eco31I	GGTCTC	1 cut(s)	687
Eco32I	GATATC	1 cut(s)	571
Eco47I	GGWCC	4 cut(s)	133, 182, 1621, 2118
Eco52I	CGGCCG	1 cut(s)	80
Eco57I	CTGAAG	1 cut(s)	1553
Eco91I	GGTNACC	2 cut(s)	142, 272
EcoO109I	RGGNCCY	1 cut(s)	182
EcoO65I	GGTNACC	2 cut(s)	142, 272
EcoRI	GAATTC	2 cut(s)	350, 785
EcoRII	CCWGG	4 cut(s)	129, 1784, 2014, 2114
EcoRV	GATATC	1 cut(s)	571
EcoT14I	CCWWGG	5 cut(s)	621, 701, 1640, 1828, 1976
EcoT38I	GRGCYC	1 cut(s)	1216
EgeI	GGCGCC	2 cut(s)	90, 1988
EheI	GGCGCC	2 cut(s)	90, 1988
ErhI	CCWWGG	5 cut(s)	621, 701, 1640, 1828, 1976
Esp3I	CGTCTC	1 cut(s)	206
FaeI	CATG	8 cut(s)	181, 670, 778, 1022, 1087, 1171, 1681, 1832
FaqI	GGGAC	3 cut(s)	168, 214, 805
FatI	CATG	8 cut(s)	177, 666, 774, 1018, 1083, 1167, 1677, 1828
FauI	CCCGC	1 cut(s)	1677
FauNDI	CATATG	2 cut(s)	576, 1792
FokI	GGATG	4 cut(s)	604, 1103, 1420, 1930
FriOI	GRGCYC	1 cut(s)	1216
GlaI	GCGC	3 cut(s)	90, 1988, 2125
GsaI	CCCAGC	1 cut(s)	1187
HaeII	RGCGCY	2 cut(s)	92, 1990
HaeIII	GGCC	4 cut(s)	82, 1606, 1645, 2157
HapII	CCGG	5 cut(s)	86, 92, 222, 1619, 1855
HgaI	GACGC	1 cut(s)	76
HhaI	GCGC	3 cut(s)	91, 1989, 2126
Hin1I	GRCGYC	2 cut(s)	89, 1987
Hin1II	CATG	8 cut(s)	181, 670, 778, 1022, 1087, 1171, 1681, 1832
Hin6I	GCGC	3 cut(s)	89, 1987, 2124
HinP1I	GCGC	3 cut(s)	89, 1987, 2124
HincII	GTYRAC	2 cut(s)	250, 313
HindII	GTYRAC	2 cut(s)	250, 313
HpaII	CCGG	5 cut(s)	86, 92, 222, 1619, 1855
HphI	GGTGA	3 cut(s)	136, 745, 2126
Hpy166II	GTNNAC	4 cut(s)	250, 313, 1178, 1867
Hpy188I	TCNGA	4 cut(s)	19, 639, 687, 2074
Hpy8I	GTNNAC	4 cut(s)	250, 313, 1178, 1867
Hpy99I	CGWCG	2 cut(s)	70, 2047
HpyAV	CCTTC	6 cut(s)	1081, 1147, 1203, 1487, 1855, 2092
HpyCH4III	ACNGT	4 cut(s)	272, 1271, 1743, 2069
HpyCH4IV	ACGT	2 cut(s)	517, 2042
HpySE526I	ACGT	2 cut(s)	517, 2042
Hsp92I	GRCGYC	2 cut(s)	89, 1987
Hsp92II	CATG	8 cut(s)	181, 670, 778, 1022, 1087, 1171, 1681, 1832
HspAI	GCGC	3 cut(s)	89, 1987, 2124
KasI	GGCGCC	2 cut(s)	88, 1986
KflI	GGGWCCC	1 cut(s)	182
KpnI	GGTACC	1 cut(s)	2115
KroI	GCCGGC	1 cut(s)	85
KroNI	GCCGGC	1 cut(s)	87
LguI	GCTCTTC	1 cut(s)	824
LmnI	GCTCC	3 cut(s)	1481, 1660, 1880
Lsp1109I	GCAGC	7 cut(s)	868, 1441, 1526, 1560, 1764, 2093, 2096
LweI	GCATC	3 cut(s)	626, 1380, 1949
MaeII	ACGT	2 cut(s)	517, 2042
MaeIII	GTNAC	7 cut(s)	142, 209, 272, 552, 953, 1021, 1400
MflI	RGATCY	2 cut(s)	1030, 1583
MhlI	GDGCHC	3 cut(s)	492, 1180, 1216
Mly113I	GGCGCC	2 cut(s)	89, 1987
MlyI	GAGTC	3 cut(s)	206, 236, 1142
MmeI	TCCRAC	2 cut(s)	1470, 1983
MreI	CGCCGGCG	1 cut(s)	85
MroNI	GCCGGC	1 cut(s)	85
MroXI	GAANNNNTTC	1 cut(s)	1239
MseI	TTAA	9 cut(s)	422, 443, 473, 494, 912, 945, 1287, 1308, 1476
MslI	CAYNNNNRTG	1 cut(s)	1356
MspA1I	CMGCKG	1 cut(s)	1573
MspCI	CTTAAG	2 cut(s)	421, 1286
MspI	CCGG	5 cut(s)	86, 92, 222, 1619, 1855
MspR9I	CCNGG	5 cut(s)	131, 1619, 1786, 2016, 2116
Mva1269I	GAATGC	1 cut(s)	2055
MvaI	CCWGG	4 cut(s)	131, 1786, 2016, 2116
NaeI	GCCGGC	1 cut(s)	87
NarI	GGCGCC	2 cut(s)	89, 1987
NciI	CCSGG	1 cut(s)	1619
NcoI	CCATGG	1 cut(s)	1828
NdeI	CATATG	2 cut(s)	576, 1792
NgoMIV	GCCGGC	1 cut(s)	85
NlaIII	CATG	8 cut(s)	181, 670, 778, 1022, 1087, 1171, 1681, 1832
NlaIV	GGNNCC	9 cut(s)	90, 135, 183, 184, 331, 1826, 1882, 1988, 2113
NmuCI	GTSAC	3 cut(s)	142, 209, 953
NspI	RCATGY	2 cut(s)	778, 1022
PagI	TCATGA	1 cut(s)	1083
PciI	ACATGT	2 cut(s)	774, 1018
PciSI	GCTCTTC	1 cut(s)	824
PctI	GAATGC	1 cut(s)	2055
PdiI	GCCGGC	1 cut(s)	87
PdmI	GAANNNNTTC	1 cut(s)	1239
PfoI	TCCNGGA	1 cut(s)	1784
PleI	GAGTC	3 cut(s)	206, 235, 1141
PluTI	GGCGCC	2 cut(s)	92, 1990
PpsI	GAGTC	3 cut(s)	206, 235, 1141
Ppu21I	YACGTR	1 cut(s)	518
PpuMI	RGGWCCY	1 cut(s)	182
PscI	ACATGT	2 cut(s)	774, 1018
Psp5II	RGGWCCY	1 cut(s)	182
Psp6I	CCWGG	4 cut(s)	129, 1784, 2014, 2114
PspEI	GGTNACC	2 cut(s)	142, 272
PspFI	CCCAGC	1 cut(s)	1183
PspGI	CCWGG	4 cut(s)	129, 1784, 2014, 2114
PspN4I	GGNNCC	9 cut(s)	90, 135, 183, 184, 331, 1826, 1882, 1988, 2113
PspPI	GGNCC	4 cut(s)	133, 182, 1621, 2118
PspPPI	RGGWCCY	1 cut(s)	182
PsrI	GAACNNNNNNTAC	2 cut(s)	313, 345
PstI	CTGCAG	1 cut(s)	1891
PstNI	CAGNNNCTG	1 cut(s)	23
PsuI	RGATCY	2 cut(s)	1030, 1583
PvuII	CAGCTG	1 cut(s)	1573
RsaI	GTAC	6 cut(s)	78, 460, 1058, 1696, 2028, 2113
RsaNI	GTAC	6 cut(s)	77, 459, 1057, 1695, 2027, 2112
RseI	CAYNNNNRTG	1 cut(s)	1356
SapI	GCTCTTC	1 cut(s)	824
SaqAI	TTAA	9 cut(s)	422, 443, 473, 494, 912, 945, 1287, 1308, 1476
Sau96I	GGNCC	4 cut(s)	133, 182, 1621, 2118
SchI	GAGTC	3 cut(s)	206, 236, 1142
ScrFI	CCNGG	5 cut(s)	131, 1619, 1786, 2016, 2116
SduI	GDGCHC	3 cut(s)	492, 1180, 1216
SfaNI	GCATC	3 cut(s)	626, 1380, 1949
SfcI	CTRYAG	5 cut(s)	1515, 1650, 1845, 1887, 1911
SfoI	GGCGCC	2 cut(s)	90, 1988
SgrAI	CRCCGGYG	1 cut(s)	85
SinI	GGWCC	4 cut(s)	133, 182, 1621, 2118
SmiMI	CAYNNNNRTG	1 cut(s)	1356
SmlI	CTYRAG	5 cut(s)	421, 1286, 2009, 2088, 2164
SmoI	CTYRAG	5 cut(s)	421, 1286, 2009, 2088, 2164
SsiI	CCGC	9 cut(s)	5, 38, 44, 83, 235, 289, 1670, 1709, 2158
SspDI	GGCGCC	2 cut(s)	88, 1986
SspI	AATATT	1 cut(s)	373
StyD4I	CCNGG	5 cut(s)	129, 1617, 1784, 2014, 2114
StyI	CCWWGG	5 cut(s)	621, 701, 1640, 1828, 1976
TaaI	ACNGT	4 cut(s)	272, 1271, 1743, 2069
TaiI	ACGT	2 cut(s)	520, 2045
TaqI	TCGA	6 cut(s)	96, 384, 584, 935, 1039, 1278
TaqII	GACCGA	1 cut(s)	590
TatI	WGTACW	1 cut(s)	2026
TauI	GCSGC	4 cut(s)	8, 40, 85, 2160
Tru1I	TTAA	9 cut(s)	422, 443, 473, 494, 912, 945, 1287, 1308, 1476
Tru9I	TTAA	9 cut(s)	422, 443, 473, 494, 912, 945, 1287, 1308, 1476
TscAI	CASTG	6 cut(s)	652, 1185, 1276, 1363, 1891, 1954
TseFI	GTSAC	3 cut(s)	142, 209, 953
TseI	GCWGC	7 cut(s)	881, 1454, 1539, 1573, 1752, 2081, 2084
Tsp45I	GTSAC	3 cut(s)	142, 209, 953
TspDTI	ATGAA	8 cut(s)	166, 990, 1029, 1100, 1184, 1310, 1799, 1854
TspGWI	ACGGA	3 cut(s)	184, 188, 1074
TspRI	CASTG	6 cut(s)	652, 1185, 1276, 1363, 1891, 1954
Vha464I	CTTAAG	2 cut(s)	421, 1286
VneI	GTGCAC	1 cut(s)	1176
VpaK11BI	GGWCC	4 cut(s)	133, 182, 1621, 2118
XapI	RAATTY	5 cut(s)	350, 785, 938, 983, 1312
XceI	RCATGY	2 cut(s)	778, 1022
XmnI	GAANNNNTTC	1 cut(s)	1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.