Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0013542

Physical Location & Seq

Genomic Coordinates Forward (+)

24473931 .. 24477506

Gene Structure 3576 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1156200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGTCTCGAGCTCAAAACCACGAGTTTCAAGAATGGTGGAACAAGCAGAGACAGACCAACCACGACCTCCTCCTCTCCTCCGACGAATCCAGCCACCTCCTCACCGTCGATATCCACAGCCCCCGCCCCGATCGTACGGTCGGAAAAGACCGGTCCCGGAGCGCCCGCCAGTTGTCCTGGGTCTGCCGCCTCAAATTCCAGCAAATCGCCGCCTCCCTCGCCTCCGTGGCCAACTCCTTCCTCGTCCTTCTCCTGACCGCCAATCGCCGCGTCACCTCCCCCGATTCGCCGGCCGACTCGGCCTCCTCCCGCCTCTACCGCGCGATCAAGGTTTTCCTGGTCGTCGTGCTGCTGCTGCTCTGCTTTGAGCTCGTGGCTTACTTCAAGGGATGGCATTTCAGTCCGCCGTCCGTGAGATCGGGGGAGCTGGCGGAGCTCGTGTACGCCAATTGGCTCCACGTTCGAGTCAATTACCTGGCGCCGCCGCTGCAGAGCTTCACCAATGTCTGCATCGTGCTCTTCCTGATTCAGTCGGTGGATCGCGTCGTTTTGGTGCTCGGATGCTTCTGGATCAAGTTTCGGAGAGTCAAGCCCAAGGCGGTCATGGAGTACAAAACGACGTCGTCGCCTTCGTCGTCCAATGTGGAGGAGGGAAATGCTGAGAAAGTGAATTTGGAGGATTATCCGATGGTGTTGCTGCAGATTCCTATGTGCAATGAGAGGGAGGTTTACCATCAATCAATTGCCGCGGTTTGTATTCAGGACTGGCCGAATGAGAGAATGCTTGTACAGGTTTTGGACGATTCTGATGATATAGAGGTTCAACAACTTATTAAGGCAGAAGTAAACAAGTGGCAACAACGGGGTGTCCCCATATTGTACAGACATCGGCTTATACGCACAGGGTATAAGGCAGGGAATCTGAAATCTGCTATGAGCTGCGATTATGTTAAAAATTATGAATTTGTGGCCATATTTGATTCAGATTTTCAGCCGGAACCTGAATTCTTGAAGAAAACCATTCCTTATTTCAAGGGGAATGATGATCTAGGATTGGTCCAGACAAGGTGGTCTTTTGTAAACAAGGATGAGAACTTGCTTACTAGACTGCAGAATATAAACTTGTCTTTCCACTTTGAGGTTGAACAACAGGTCAATGGTGTGTTTATCAACTTCTTTGGTTTTAACGGTACAGCTGGTGTGTGGAGGATTAAGGCCCTTGAGGAGTGCGGTGGTTGGTTGGAACGAACGACCGTCGAAGACATGGATGTTGCAGTTCGCGCTCATCTTTGTGGGTGGAAGTTCATATATCTGAATGATGTCAAGTGCGTTTGTGAACTTCCAGAGTCCTATGGTGCATACAAGAAACAGCAACATCGCTGGCATTCTGGTCCAATGCAGTTATTCCGCATGTGTTTCTTTGACATACTCCGTTCAAAGGTGAGTGTGACCAAGAAAGCGAATTTGATATTTCTCTTCTTCCTCCTGCGGAAGCTCATACTGCCGTTTTATTCATTCACTCTATTTTGCATCATTCTTCCACTGACAATGTTCCTGCCAGAAGCTCAGCTACCAGCATGGGTTGTTTGTTATGTTCCTGGAATTATGTCTGTCTTGAATATTCTTCCTGCACCACGTTCATTCCCATTTATCGTCCCCTACCTTCTGTTTGAGAATACCATGTCAGTGACGAAATTTAATGCAATGATATCAGGATTGTTTCAGTTTGGGAGTTCTTATGAGTGGATAGTGACAAAGAAACTGGGAAGATCATCGGAAACAGATCTAATTGCCTTTGAAAGGGAGTCTGTGCCTCTGGTGCCAACTACCGGTCTTCATAGGTCGGCCTCAGAATCGGGGCTTGAGGAGCTGACTAAGCTAGAGACAACTAAAAAAAGTGGGAAAAAGAGAAGAAACCGTTTATACAGAAAAGAACTTGTAATTGCCTTTGTACTGTTGACTGCTTCAGCAAGAAGCTTGCTCTCTGCCCAAGGAATTCACTTCTACTTCCTACTGTTTCAAGGGATCACCTTTCTAGTTGTTGGTCTTGATTTGATAGGAGAGCAGGTGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0009856 GO:0012505 GO:0022414 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0048856 GO:0048868 GO:0051704 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

692

Amino Acids

79.39

Weight (kDa)

8.93

Isoelectric Point (pI)

47.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_tranf_2_3	PF13641	230 - 462	6.7e-13	Glycosyltransferase like family 2
Glycos_transf_2	PF00535	235 - 370	1.3e-07	Glycosyl transferase family 2
Glyco_trans_2_3	PF13632	323 - 519	5.5e-16	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07330 AT3G07330
fragaria_vesca	FvH4_2g18120
malus_domestica	MD05G1166000.v1.1 MD10G1156200.v1.1
prunus_persica	Prupe.8G194000_v2.0.a1
pyrus_communis	pycom05g15460 pycom10g13440
rosa_chinensis	RchiOBHm_Chr6g0283521
rosa_laevigata	RLG00000012820
rosa_multiflora	Rmu_sc0005719.1_g000002 Rmu_sc0007194.1_g000007
rosa_roxburghii	Rroxscaffold_7G00185470
rosa_rugosa	Rorug06G0155100
rosa_samantha	Rh6AG267300 Rh6BG269800 Rh6CG269600
rosa_wichuraiana	Rw6G023140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2056
AasI	GACNNNNNNGTC	1 cut(s)	1069
AatII	GACGTC	1 cut(s)	623
Acc36I	ACCTGC	1 cut(s)	2056
AccB1I	GGYRCC	2 cut(s)	478, 1819
AccII	CGCG	6 cut(s)	270, 321, 323, 543, 749, 1281
AclWI	GGATC	3 cut(s)	546, 578, 2033
AcoI	YGGCCR	4 cut(s)	228, 291, 767, 969
AcsI	RAATTY	7 cut(s)	194, 670, 962, 1004, 1462, 1694, 1995
AcuI	CTGAAG	1 cut(s)	1950
AcyI	GRCGYC	2 cut(s)	479, 620
AfaI	GTAC	7 cut(s)	136, 443, 611, 789, 881, 1192, 1953
AfiI	CCNNNNNNNGG	4 cut(s)	1138, 1438, 1800, 1829
AgeI	ACCGGT	2 cut(s)	150, 1829
AjnI	CCWGG	4 cut(s)	176, 336, 474, 1597
AjuI	GAANNNNNNNTTGG	2 cut(s)	656, 688
Alw21I	GWGCWC	5 cut(s)	13, 372, 438, 519, 558
Alw26I	GTCTC	3 cut(s)	9, 43, 1877
AlwI	GGATC	3 cut(s)	546, 578, 2033
Ama87I	CYCGRG	1 cut(s)	6
AoxI	GGCC	7 cut(s)	228, 291, 300, 767, 969, 1215, 1845
ApeKI	GCWGC	6 cut(s)	349, 352, 355, 487, 697, 939
ApoI	RAATTY	7 cut(s)	194, 670, 962, 1004, 1462, 1694, 1995
AsiGI	ACCGGT	2 cut(s)	150, 1829
AspLEI	GCGC	4 cut(s)	164, 323, 481, 1283
AspS9I	GGNCC	4 cut(s)	153, 1057, 1216, 1391
AsuC2I	CCSGG	1 cut(s)	157
AsuHPI	GGTGA	5 cut(s)	94, 265, 490, 1453, 2020
AvaI	CYCGRG	1 cut(s)	6
AvaII	GGWCC	3 cut(s)	153, 1057, 1391
BalI	TGGCCA	2 cut(s)	230, 971
BanI	GGYRCC	2 cut(s)	478, 1819
BanII	GRGCYC	3 cut(s)	13, 372, 438
BarI	GAAGNNNNNNTAC	2 cut(s)	1554, 1586
BauI	CACGAG	3 cut(s)	20, 371, 437
BbsI	GAAGAC	2 cut(s)	1266, 1826
Bbv12I	GWGCWC	5 cut(s)	13, 372, 438, 519, 558
BbvI	GCAGC	6 cut(s)	336, 339, 342, 474, 684, 926
BccI	CCATC	3 cut(s)	384, 682, 741
BceAI	ACGGC	2 cut(s)	391, 1489
BcgI	CGANNNNNNTGC	2 cut(s)	676, 710
BciT130I	CCWGG	4 cut(s)	178, 338, 476, 1599
BcnI	CCSGG	1 cut(s)	157
BcoDI	GTCTC	3 cut(s)	9, 43, 1877
BfaI	CTAG	4 cut(s)	1049, 1104, 1880, 2036
BfmI	CTRYAG	3 cut(s)	488, 698, 1109
BfoI	RGCGCY	2 cut(s)	165, 482
BfuAI	ACCTGC	1 cut(s)	2056
BglI	GCCNNNNNGGC	2 cut(s)	227, 299
BglII	AGATCT	1 cut(s)	1783
BlpI	GCTNAGC	1 cut(s)	1566
Bme1390I	CCNGG	5 cut(s)	157, 178, 338, 476, 1599
Bme18I	GGWCC	3 cut(s)	153, 1057, 1391
BmeT110I	CYCGRG	1 cut(s)	6
BmgT120I	GGNCC	4 cut(s)	153, 1057, 1216, 1391
BmiI	GGNNCC	5 cut(s)	155, 455, 480, 999, 1821
BmrFI	CCNGG	5 cut(s)	157, 178, 338, 476, 1599
BmrI	ACTGGG	1 cut(s)	1772
BmsI	GCATC	3 cut(s)	519, 551, 1539
BmuI	ACTGGG	1 cut(s)	1772
BpiI	GAAGAC	2 cut(s)	1266, 1826
Bpu1102I	GCTNAGC	1 cut(s)	1566
BpuEI	CTTGAG	2 cut(s)	1241, 1883
BpuMI	CCSGG	1 cut(s)	157
BsaHI	GRCGYC	2 cut(s)	479, 620
BsaJI	CCNNGG	5 cut(s)	177, 225, 594, 747, 1990
BsaWI	WCCGGW	2 cut(s)	150, 1829
BsaXI	ACNNNNNCTCC	5 cut(s)	287, 317, 425, 455, 2052
Bsc4I	CCNNNNNNNGG	4 cut(s)	1138, 1438, 1800, 1829
Bse118I	RCCGGY	3 cut(s)	150, 289, 1829
Bse1I	ACTGG	3 cut(s)	169, 770, 1767
Bse3DI	GCAATG	2 cut(s)	721, 1710
BseBI	CCWGG	4 cut(s)	178, 338, 476, 1599
BseDI	CCNNGG	5 cut(s)	177, 225, 594, 747, 1990
BseGI	GGATG	4 cut(s)	395, 566, 1093, 1273
BseLI	CCNNNNNNNGG	4 cut(s)	1138, 1438, 1800, 1829
BseMI	GCAATG	2 cut(s)	721, 1710
BseMII	CTCAG	3 cut(s)	651, 1580, 1863
BseNI	ACTGG	3 cut(s)	169, 770, 1767
BseRI	GAGGAG	8 cut(s)	59, 62, 67, 89, 295, 662, 1238, 1880
BseX3I	CGGCCG	1 cut(s)	291
BseXI	GCAGC	6 cut(s)	336, 339, 342, 474, 684, 926
BsgI	GTGCAG	1 cut(s)	1614
Bsh1236I	CGCG	6 cut(s)	270, 321, 323, 543, 749, 1281
Bsh1285I	CGRYCG	4 cut(s)	133, 141, 294, 1254
BshFI	GGCC	7 cut(s)	230, 293, 302, 769, 971, 1217, 1847
BshNI	GGYRCC	2 cut(s)	478, 1819
BshTI	ACCGGT	2 cut(s)	150, 1829
BsiEI	CGRYCG	4 cut(s)	133, 141, 294, 1254
BsiHKAI	GWGCWC	5 cut(s)	13, 372, 438, 519, 558
BsiHKCI	CYCGRG	1 cut(s)	6
BsiSI	CCGG	5 cut(s)	151, 157, 290, 995, 1830
BsiWI	CGTACG	1 cut(s)	134
BslFI	GGGAC	3 cut(s)	139, 854, 1640
BslI	CCNNNNNNNGG	4 cut(s)	1138, 1438, 1800, 1829
BsmAI	GTCTC	3 cut(s)	9, 43, 1877
BsmFI	GGGAC	3 cut(s)	139, 854, 1640
BsmI	GAATGC	2 cut(s)	786, 1384
BsnI	GGCC	7 cut(s)	230, 293, 302, 769, 971, 1217, 1847
BsoBI	CYCGRG	1 cut(s)	6
Bsp1286I	GDGCHC	5 cut(s)	13, 372, 438, 519, 558
Bsp1407I	TGTACA	2 cut(s)	787, 879
Bsp143I	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
Bsp1720I	GCTNAGC	1 cut(s)	1566
BspANI	GGCC	7 cut(s)	230, 293, 302, 769, 971, 1217, 1847
BspCNI	CTCAG	3 cut(s)	652, 1579, 1862
BspFNI	CGCG	6 cut(s)	270, 321, 323, 543, 749, 1281
BspLI	GGNNCC	5 cut(s)	155, 455, 480, 999, 1821
BspMAI	CTGCAG	3 cut(s)	492, 702, 1113
BspMI	ACCTGC	1 cut(s)	2056
BspPI	GGATC	3 cut(s)	546, 578, 2033
BspQI	GCTCTTC	1 cut(s)	524
BspT107I	GGYRCC	2 cut(s)	478, 1819
BsrDI	GCAATG	2 cut(s)	721, 1710
BsrFI	RCCGGY	3 cut(s)	150, 289, 1829
BsrGI	TGTACA	2 cut(s)	787, 879
BsrI	ACTGG	3 cut(s)	169, 770, 1767
BssAI	RCCGGY	3 cut(s)	150, 289, 1829
BssECI	CCNNGG	5 cut(s)	177, 225, 594, 747, 1990
BssMI	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
BssNI	GRCGYC	2 cut(s)	479, 620
BssSI	CACGAG	3 cut(s)	20, 371, 437
BssT1I	CCWWGG	2 cut(s)	594, 1990
Bst2BI	CACGAG	3 cut(s)	20, 371, 437
Bst2UI	CCWGG	4 cut(s)	178, 338, 476, 1599
Bst4CI	ACNGT	7 cut(s)	106, 139, 1190, 1255, 1919, 1956, 2016
Bst6I	CTCTTC	2 cut(s)	524, 1481
BstACI	GRCGYC	2 cut(s)	479, 620
BstAUI	TGTACA	2 cut(s)	787, 879
BstC8I	GCNNGC	5 cut(s)	166, 291, 429, 1382, 1979
BstDEI	CTNAG	4 cut(s)	660, 1566, 1849, 1875
BstDSI	CCRYGG	2 cut(s)	225, 747
BstENI	CCTNNNNNAGG	1 cut(s)	1798
BstF5I	GGATG	4 cut(s)	395, 566, 1093, 1273
BstFNI	CGCG	6 cut(s)	270, 321, 323, 543, 749, 1281
BstH2I	RGCGCY	2 cut(s)	165, 482
BstHHI	GCGC	4 cut(s)	164, 323, 481, 1283
BstKTI	GATC	9 cut(s)	133, 327, 419, 541, 573, 1048, 1772, 1786, 2028
BstMAI	GTCTC	3 cut(s)	9, 43, 1877
BstMBI	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
BstMCI	CGRYCG	4 cut(s)	133, 141, 294, 1254
BstNI	CCWGG	4 cut(s)	178, 338, 476, 1599
BstNSI	RCATGY	1 cut(s)	1414
BstSCI	CCNGG	5 cut(s)	155, 176, 336, 474, 1597
BstSFI	CTRYAG	3 cut(s)	488, 698, 1109
BstUI	CGCG	6 cut(s)	270, 321, 323, 543, 749, 1281
BstV1I	GCAGC	6 cut(s)	336, 339, 342, 474, 684, 926
BstV2I	GAAGAC	2 cut(s)	1266, 1826
BstX2I	RGATCY	1 cut(s)	1783
BstYI	RGATCY	1 cut(s)	1783
BstZI	CGGCCG	1 cut(s)	291
BsuRI	GGCC	7 cut(s)	230, 293, 302, 769, 971, 1217, 1847
BtgI	CCRYGG	2 cut(s)	225, 747
BtgZI	GCGATG	1 cut(s)	1361
BtsCI	GGATG	4 cut(s)	395, 566, 1093, 1273
BtsIMutI	CAGTG	2 cut(s)	1541, 1692
BveI	ACCTGC	1 cut(s)	2056
Cac8I	GCNNGC	5 cut(s)	166, 291, 429, 1382, 1979
CfoI	GCGC	4 cut(s)	164, 323, 481, 1283
Cfr10I	RCCGGY	3 cut(s)	150, 289, 1829
Cfr13I	GGNCC	4 cut(s)	153, 1057, 1216, 1391
Cfr42I	CCGCGG	1 cut(s)	750
CseI	GACGC	2 cut(s)	259, 532
Csp6I	GTAC	7 cut(s)	135, 442, 610, 788, 880, 1191, 1952
CspAI	ACCGGT	2 cut(s)	150, 1829
CspCI	CAANNNNNGTGG	2 cut(s)	17, 52
CviAII	CATG	5 cut(s)	604, 1264, 1411, 1578, 1681
CviQI	GTAC	7 cut(s)	135, 442, 610, 788, 880, 1191, 1952
DdeI	CTNAG	4 cut(s)	660, 1566, 1849, 1875
DinI	GGCGCC	1 cut(s)	480
DpnI	GATC	9 cut(s)	132, 326, 418, 540, 572, 1047, 1771, 1785, 2027
DpnII	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
DrdI	GACNNNNNNGTC	1 cut(s)	1069
DseDI	GACNNNNNNGTC	1 cut(s)	1069
EaeI	YGGCCR	4 cut(s)	228, 291, 767, 969
EagI	CGGCCG	1 cut(s)	291
Eam1104I	CTCTTC	2 cut(s)	524, 1481
EarI	CTCTTC	2 cut(s)	524, 1481
EciI	GGCGGA	2 cut(s)	393, 446
Ecl136II	GAGCTC	3 cut(s)	11, 370, 436
EclXI	CGGCCG	1 cut(s)	291
Eco130I	CCWWGG	2 cut(s)	594, 1990
Eco24I	GRGCYC	3 cut(s)	13, 372, 438
Eco32I	GATATC	2 cut(s)	112, 1710
Eco47I	GGWCC	3 cut(s)	153, 1057, 1391
Eco52I	CGGCCG	1 cut(s)	291
Eco53kI	GAGCTC	3 cut(s)	11, 370, 436
Eco57I	CTGAAG	1 cut(s)	1950
Eco88I	CYCGRG	1 cut(s)	6
EcoICRI	GAGCTC	3 cut(s)	11, 370, 436
EcoNI	CCTNNNNNAGG	1 cut(s)	1798
EcoO109I	RGGNCCY	1 cut(s)	1216
EcoRI	GAATTC	2 cut(s)	1004, 1995
EcoRII	CCWGG	4 cut(s)	176, 336, 474, 1597
EcoRV	GATATC	2 cut(s)	112, 1710
EcoT14I	CCWWGG	2 cut(s)	594, 1990
EcoT38I	GRGCYC	3 cut(s)	13, 372, 438
EgeI	GGCGCC	1 cut(s)	480
EheI	GGCGCC	1 cut(s)	480
ErhI	CCWWGG	2 cut(s)	594, 1990
FaeI	CATG	5 cut(s)	607, 1267, 1414, 1581, 1684
FalI	AAGNNNNNCTT	2 cut(s)	1057, 1089
FaqI	GGGAC	3 cut(s)	139, 854, 1640
FatI	CATG	5 cut(s)	603, 1263, 1410, 1577, 1680
FauI	CCCGC	3 cut(s)	131, 173, 317
FokI	GGATG	4 cut(s)	402, 573, 1100, 1280
FriOI	GRGCYC	3 cut(s)	13, 372, 438
FspBI	CTAG	4 cut(s)	1049, 1104, 1880, 2036
GlaI	GCGC	4 cut(s)	163, 322, 480, 1282
HaeII	RGCGCY	2 cut(s)	165, 482
HaeIII	GGCC	7 cut(s)	230, 293, 302, 769, 971, 1217, 1847
HapII	CCGG	5 cut(s)	151, 157, 290, 995, 1830
HgaI	GACGC	2 cut(s)	259, 532
HhaI	GCGC	4 cut(s)	164, 323, 481, 1283
Hin1I	GRCGYC	2 cut(s)	479, 620
Hin1II	CATG	5 cut(s)	607, 1267, 1414, 1581, 1684
Hin6I	GCGC	4 cut(s)	162, 321, 479, 1281
HinP1I	GCGC	4 cut(s)	162, 321, 479, 1281
HincII	GTYRAC	1 cut(s)	1959
HindII	GTYRAC	1 cut(s)	1959
HindIII	AAGCTT	1 cut(s)	1975
HpaII	CCGG	5 cut(s)	151, 157, 290, 995, 1830
HphI	GGTGA	5 cut(s)	94, 265, 490, 1453, 2020
Hpy166II	GTNNAC	6 cut(s)	442, 730, 847, 1081, 1337, 1959
Hpy8I	GTNNAC	6 cut(s)	442, 730, 847, 1081, 1337, 1959
Hpy99I	CGWCG	9 cut(s)	86, 110, 347, 548, 622, 625, 628, 637, 1259
HpyAV	CCTTC	4 cut(s)	247, 257, 639, 1673
HpyCH4III	ACNGT	7 cut(s)	106, 139, 1190, 1255, 1919, 1956, 2016
HpyCH4IV	ACGT	3 cut(s)	459, 620, 1636
HpyF3I	CTNAG	4 cut(s)	660, 1566, 1849, 1875
HpySE526I	ACGT	3 cut(s)	459, 620, 1636
Hsp92I	GRCGYC	2 cut(s)	479, 620
Hsp92II	CATG	5 cut(s)	607, 1267, 1414, 1581, 1684
HspAI	GCGC	4 cut(s)	162, 321, 479, 1281
KasI	GGCGCC	1 cut(s)	478
KroI	GCCGGC	1 cut(s)	289
KroNI	GCCGGC	1 cut(s)	291
KspI	CCGCGG	1 cut(s)	750
Kzo9I	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
LguI	GCTCTTC	1 cut(s)	524
LmnI	GCTCC	5 cut(s)	159, 424, 433, 459, 1867
Lsp1109I	GCAGC	6 cut(s)	336, 339, 342, 474, 684, 926
LweI	GCATC	3 cut(s)	519, 551, 1539
MaeI	CTAG	4 cut(s)	1049, 1104, 1880, 2036
MaeII	ACGT	3 cut(s)	459, 620, 1636
MaeIII	GTNAC	4 cut(s)	271, 1447, 1687, 1750
MalI	GATC	9 cut(s)	132, 326, 418, 540, 572, 1047, 1771, 1785, 2027
MboI	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
MfeI	CAATTG	2 cut(s)	448, 741
MflI	RGATCY	1 cut(s)	1783
MhlI	GDGCHC	5 cut(s)	13, 372, 438, 519, 558
MlsI	TGGCCA	2 cut(s)	230, 971
MluNI	TGGCCA	2 cut(s)	230, 971
Mly113I	GGCGCC	1 cut(s)	479
MlyI	GAGTC	5 cut(s)	290, 474, 594, 1355, 1814
MmeI	TCCRAC	3 cut(s)	105, 121, 1221
Mox20I	TGGCCA	2 cut(s)	230, 971
MroNI	GCCGGC	1 cut(s)	289
MscI	TGGCCA	2 cut(s)	230, 971
MseI	TTAA	6 cut(s)	834, 951, 1185, 1212, 1698, 2074
MslI	CAYNNNNRTG	2 cut(s)	1290, 1685
Msp20I	TGGCCA	2 cut(s)	230, 971
MspA1I	CMGCKG	3 cut(s)	487, 749, 1196
MspI	CCGG	5 cut(s)	151, 157, 290, 995, 1830
MspR9I	CCNGG	5 cut(s)	157, 178, 338, 476, 1599
MunI	CAATTG	2 cut(s)	448, 741
Mva1269I	GAATGC	2 cut(s)	786, 1384
MvaI	CCWGG	4 cut(s)	178, 338, 476, 1599
MvnI	CGCG	6 cut(s)	270, 321, 323, 543, 749, 1281
NaeI	GCCGGC	1 cut(s)	291
NarI	GGCGCC	1 cut(s)	479
NciI	CCSGG	1 cut(s)	157
NdeII	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
NgoMIV	GCCGGC	1 cut(s)	289
NlaIII	CATG	5 cut(s)	607, 1267, 1414, 1581, 1684
NlaIV	GGNNCC	5 cut(s)	155, 455, 480, 999, 1821
NmeAIII	GCCGAG	1 cut(s)	278
NmuCI	GTSAC	4 cut(s)	271, 1447, 1687, 1750
NspI	RCATGY	1 cut(s)	1414
PaeR7I	CTCGAG	1 cut(s)	6
PaqCI	CACCTGC	1 cut(s)	2056
PciSI	GCTCTTC	1 cut(s)	524
PcsI	WCGNNNNNNNCGW	2 cut(s)	629, 632
PctI	GAATGC	2 cut(s)	786, 1384
PdiI	GCCGGC	1 cut(s)	291
PfeI	GAWTC	8 cut(s)	86, 284, 526, 703, 803, 919, 980, 1853
Pfl23II	CGTACG	1 cut(s)	134
PflFI	GACNNNGTC	1 cut(s)	622
PfoI	TCCNGGA	2 cut(s)	155, 1597
PinAI	ACCGGT	2 cut(s)	150, 1829
Ple19I	CGATCG	1 cut(s)	133
PleI	GAGTC	5 cut(s)	290, 473, 593, 1354, 1813
PluTI	GGCGCC	1 cut(s)	482
PpsI	GAGTC	5 cut(s)	290, 473, 593, 1354, 1813
Psp124BI	GAGCTC	3 cut(s)	13, 372, 438
Psp6I	CCWGG	4 cut(s)	176, 336, 474, 1597
PspGI	CCWGG	4 cut(s)	176, 336, 474, 1597
PspLI	CGTACG	1 cut(s)	134
PspN4I	GGNNCC	5 cut(s)	155, 455, 480, 999, 1821
PspPI	GGNCC	4 cut(s)	153, 1057, 1216, 1391
PstI	CTGCAG	3 cut(s)	492, 702, 1113
PsuI	RGATCY	1 cut(s)	1783
PsyI	GACNNNGTC	1 cut(s)	622
PvuI	CGATCG	1 cut(s)	133
PvuII	CAGCTG	1 cut(s)	1196
RsaI	GTAC	7 cut(s)	136, 443, 611, 789, 881, 1192, 1953
RsaNI	GTAC	7 cut(s)	135, 442, 610, 788, 880, 1191, 1952
RseI	CAYNNNNRTG	2 cut(s)	1290, 1685
SacI	GAGCTC	3 cut(s)	13, 372, 438
SacII	CCGCGG	1 cut(s)	750
SapI	GCTCTTC	1 cut(s)	524
SaqAI	TTAA	6 cut(s)	834, 951, 1185, 1212, 1698, 2074
Sau3AI	GATC	9 cut(s)	130, 324, 416, 538, 570, 1045, 1769, 1783, 2025
Sau96I	GGNCC	4 cut(s)	153, 1057, 1216, 1391
SchI	GAGTC	5 cut(s)	290, 474, 594, 1355, 1814
ScrFI	CCNGG	5 cut(s)	157, 178, 338, 476, 1599
SduI	GDGCHC	5 cut(s)	13, 372, 438, 519, 558
SfaNI	GCATC	3 cut(s)	519, 551, 1539
SfcI	CTRYAG	3 cut(s)	488, 698, 1109
SfiI	GGCCNNNNNGGCC	1 cut(s)	299
SfoI	GGCGCC	1 cut(s)	480
Sfr274I	CTCGAG	1 cut(s)	6
Sfr303I	CCGCGG	1 cut(s)	750
SgrBI	CCGCGG	1 cut(s)	750
SinI	GGWCC	3 cut(s)	153, 1057, 1391
SlaI	CTCGAG	1 cut(s)	6
SmiMI	CAYNNNNRTG	2 cut(s)	1290, 1685
SmlI	CTYRAG	3 cut(s)	6, 1220, 1862
SmoI	CTYRAG	3 cut(s)	6, 1220, 1862
SspDI	GGCGCC	1 cut(s)	478
SspI	AATATT	1 cut(s)	1621
SspMI	CTAG	4 cut(s)	1049, 1104, 1880, 2036
SstI	GAGCTC	3 cut(s)	13, 372, 438
StyD4I	CCNGG	5 cut(s)	155, 176, 336, 474, 1597
StyI	CCWWGG	2 cut(s)	594, 1990
TaaI	ACNGT	7 cut(s)	106, 139, 1190, 1255, 1919, 1956, 2016
TaiI	ACGT	3 cut(s)	462, 623, 1639
TaqI	TCGA	4 cut(s)	7, 108, 463, 1257
TatI	WGTACW	4 cut(s)	609, 787, 879, 1951
TauI	GCSGC	6 cut(s)	189, 212, 270, 484, 487, 749
TfiI	GAWTC	8 cut(s)	86, 284, 526, 703, 803, 919, 980, 1853
Tru1I	TTAA	6 cut(s)	834, 951, 1185, 1212, 1698, 2074
Tru9I	TTAA	6 cut(s)	834, 951, 1185, 1212, 1698, 2074
TscAI	CASTG	2 cut(s)	1548, 1692
TseFI	GTSAC	4 cut(s)	271, 1447, 1687, 1750
TseI	GCWGC	6 cut(s)	349, 352, 355, 487, 697, 939
Tsp45I	GTSAC	4 cut(s)	271, 1447, 1687, 1750
TspDTI	ATGAA	5 cut(s)	975, 1294, 1503, 1629, 1826
TspGWI	ACGGA	3 cut(s)	214, 400, 1421
TspRI	CASTG	2 cut(s)	1548, 1692
Tth111I	GACNNNGTC	1 cut(s)	622
VpaK11BI	GGWCC	3 cut(s)	153, 1057, 1391
XagI	CCTNNNNNAGG	1 cut(s)	1798
XapI	RAATTY	7 cut(s)	194, 670, 962, 1004, 1462, 1694, 1995
XceI	RCATGY	1 cut(s)	1414
XcmI	CCANNNNNNNNNTGG	1 cut(s)	601
XhoI	CTCGAG	1 cut(s)	6
XspI	CTAG	4 cut(s)	1049, 1104, 1880, 2036
ZraI	GACGTC	1 cut(s)	621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.