Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0013542

Physical Location & Seq

Genomic Coordinates Reverse (-)

24841286 .. 24845222

Gene Structure 3937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00185470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGTCTCCGGCGCCGAACAACCCAGAGTTTCAAGAATGGTGGAACAAGCAGAGACAAACCAACCACGAAAACGGCGACGATTCCTCCAGTCACTTGCTCACCGTCGAGATCAGCAGCCCCGGCGCCGATCGGACCGTAGGCAAAGACCGCTCCCGGAGCGCCCGCCAGCTCTCCTGGCTCTGGCTCTTAAAATTCCAACAAATCGCCGCCTCCTTCGCCTCCGTAACCAATTCCTTCGTCGGCCTCGTCCGCACCGCCAACCGCCGCATCGCCTCCCCCGATTCGCCGGCCGACTCCGCCTCGTCGCGGCTCTACCGAGTCATCAAGGGGTTCCTGATCTTCGTGCTCTTGCTGCTCTGCGTTGAGCTCGTCGCCTACTTTAAGGGCTGGCATTTCAGTCCGCCGACGGTGGGGTCCGCCGAGGTCATCGGAATCGTATATGCGAATTGGCTCCACGTCAGAGTCAATTACCTGGCGCCGCCGCTGCAGACCTTCACCAACGTCTGCATTGTGCTGTTTCTGATACAGTCGGTGGACCGCGTCATTCTGGTGCTCGGATGCTTCTGGATCAAGTTCCGGCGAGTCAAGCCCGAGGCTGCCATGGAGTACAAAACGACGCCGTCCAGTGAGGAGGAGGGTGGGACCGAGAATGTGGAGGATTATCCCATGGTGTTGTTGCAGATCCCTATGTGCAATGAGAGGGAGTTAGTTAGAACCAAAGCTTCAATTTTTACTGTTACTGTGTATGAAAGTGTTGAAAATGTGATTGCATTGGGTGAGGGACAGGTTTACCATCAATCGATTGCGACGGTTTGTATTCAGGACTGGCCGAGGGAGAGGATGCTTGTGCAGGTTTTGGATGATTCCGATGATTTAGATGTTCAGCTTCTTATAAAGGCTGAAGTACAAAAGTGGCAGCAAAGGGGTGTTCCCATAGTGTATAGACATCGTCTTTTACGCACAGGGTATAAGGCAGGGAATCTCAAGTCTGCCATGAGCTGCGATTATGTTAAGAATTATGAGTTTGTGGCCATCTTCGATGCTGATTTTCAGCCAGGACCGGACTTCTTGAAGAAGACCATTCCTTATTTCAAGGGGAATGATGATCTAGGATTGGTCCAGACAAGGTGGTCTTTTGTAAACAAGGATGAAAACTTGCTTACCAGACTGCAGAATATAAACTTATCGTTCCACTTTGAGGTTGAACAACAAGTCAATGGTGTGTATATCAACTTCTTTGGTTTTAACGGTACAGCTGGTGTCTGGAGGATTACGGCCCTTGAGGAATGTGGTGGCTGGCTGGAAAGAACTACTGTTGAGGACATGGATGTCGCAGTTCGTGCTCATCTTTGTGGATGGAAGTTCATATATTTGAATGATGTCAAGTGCCTTTGTGAACTTCCAGAGTCCTATGAGGCATACAAGAAACAGCAACATCGCTGGCATTCTGGTCCAATGCAGTTATTCCGCATGTGCTTCGTTGACATACTCCGCTCAAAGGTGAGTGTGACCAAGAAGGCAAATTTGATATTTCTCTTTTTCCTCCTTCGGAAGCTTATACTGCCGTTTTATTCATTCACTCTATTTTGTATCATTCTTCCACTGACCATGTTCCTGCCAGAAGCTCAAATACCAGCATGGGTGGTTTGTTATGTTCCTGGAATTATGTCCGTCTTGAATATCCTTCCCGCACCGCGTTCATTCCCCTTTATCGTCCCTTACCTTCTCTTTGAGAATACCATGTCTGTCACCAAATTCAATGCCATGATATCAGGCTTGTTTCAGTTTGGAAGTTCATATGAGTGGATAGTTACAAAGAAATTAGGAAGATCATCAGAAGCAGATTTAGTTGCTTATGAAAAGGAGTCTGACCCTCTATTGGAAACTACTACCGGTCTCCATAGGTCGGCCTCAGAATCAGGGCTTGCTGATCTGACAAAACTAGAGACATCTAAGAAAAGTGGCAAAAGGAGAAGAAACCGTTTATATAGGAAGGAACTTGTAATAGCCTTTATATTGTTGACAGCTTCGGCAAGAAGCTTGCTGTCTGCCCAAGGAATTCACTTTTACTTCCTACTATTTCAAGGGATCACGTTTCTAGTTGTTGGTCTCGATTTGATTGGAGAGCAGGTTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0009856 GO:0012505 GO:0022414 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0048856 GO:0048868 GO:0051704 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

712

Amino Acids

81.25

Weight (kDa)

8.27

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_tranf_2_3	PF13641	255 - 482	1.2e-11	Glycosyltransferase like family 2
Glyco_trans_2_3	PF13632	343 - 539	2.7e-15	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07330 AT3G07330
fragaria_vesca	FvH4_2g18120
malus_domestica	MD05G1166000.v1.1 MD10G1156200.v1.1
prunus_persica	Prupe.8G194000_v2.0.a1
pyrus_communis	pycom05g15460 pycom10g13440
rosa_chinensis	RchiOBHm_Chr6g0283521
rosa_laevigata	RLG00000012820
rosa_multiflora	Rmu_sc0005719.1_g000002 Rmu_sc0007194.1_g000007
rosa_roxburghii	Rroxscaffold_7G00185470
rosa_rugosa	Rorug06G0155100
rosa_samantha	Rh6AG267300 Rh6BG269800 Rh6CG269600
rosa_wichuraiana	Rw6G023140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	893
AasI	GACNNNNNNGTC	3 cut(s)	412, 1129, 1328
Acc36I	ACCTGC	2 cut(s)	841, 2119
AccB1I	GGYRCC	3 cut(s)	10, 122, 475
AccBSI	CCGCTC	2 cut(s)	150, 1494
AccII	CGCG	3 cut(s)	307, 540, 1696
AclWI	GGATC	3 cut(s)	575, 676, 2096
AcoI	YGGCCR	3 cut(s)	288, 827, 1029
AcsI	RAATTY	4 cut(s)	191, 1522, 1754, 2058
AcuI	CTGAAG	1 cut(s)	921
AcyI	GRCGYC	4 cut(s)	11, 123, 476, 617
AfaI	GTAC	3 cut(s)	608, 906, 1252
AfiI	CCNNNNNNNGG	7 cut(s)	180, 306, 410, 1198, 1498, 1879, 1906
AgeI	ACCGGT	1 cut(s)	1892
AjiI	CACGTC	1 cut(s)	457
AjnI	CCWGG	4 cut(s)	173, 471, 1054, 1657
Alw21I	GWGCWC	4 cut(s)	348, 369, 555, 1345
Alw26I	GTCTC	5 cut(s)	9, 46, 1901, 1940, 2114
AlwI	GGATC	3 cut(s)	575, 676, 2096
Ama87I	CYCGRG	1 cut(s)	590
AoxI	GGCC	6 cut(s)	241, 288, 827, 1029, 1275, 1908
ApeKI	GCWGC	6 cut(s)	114, 352, 484, 596, 916, 999
ApoI	RAATTY	4 cut(s)	191, 1522, 1754, 2058
AsiGI	ACCGGT	1 cut(s)	1892
AspLEI	GCGC	4 cut(s)	13, 125, 161, 478
AspS9I	GGNCC	8 cut(s)	132, 414, 535, 642, 1058, 1117, 1276, 1451
AsuC2I	CCSGG	2 cut(s)	120, 154
AsuHPI	GGTGA	5 cut(s)	91, 487, 788, 1513, 1741
AvaI	CYCGRG	1 cut(s)	590
AvaII	GGWCC	7 cut(s)	132, 414, 535, 642, 1058, 1117, 1451
BalI	TGGCCA	1 cut(s)	1031
BanI	GGYRCC	3 cut(s)	10, 122, 475
BanII	GRGCYC	1 cut(s)	369
BarI	GAAGNNNNNNTAC	4 cut(s)	1217, 1249, 1614, 1646
BbsI	GAAGAC	1 cut(s)	1082
Bbv12I	GWGCWC	4 cut(s)	348, 369, 555, 1345
BbvI	GCAGC	6 cut(s)	126, 339, 471, 583, 928, 986
BccI	CCATC	3 cut(s)	801, 1040, 1350
BceAI	ACGGC	4 cut(s)	88, 604, 1290, 1549
BcgI	CGANNNNNNTGC	2 cut(s)	1459, 1493
BciT130I	CCWGG	4 cut(s)	175, 473, 1056, 1659
BcnI	CCSGG	2 cut(s)	120, 154
BcoDI	GTCTC	5 cut(s)	9, 46, 1901, 1940, 2114
BfaI	CTAG	3 cut(s)	1109, 1943, 2099
BfmI	CTRYAG	2 cut(s)	485, 1169
BfoI	RGCGCY	4 cut(s)	14, 126, 162, 479
BfuAI	ACCTGC	2 cut(s)	841, 2119
Bme1390I	CCNGG	6 cut(s)	120, 154, 175, 473, 1056, 1659
Bme18I	GGWCC	7 cut(s)	132, 414, 535, 642, 1058, 1117, 1451
BmeT110I	CYCGRG	1 cut(s)	590
BmgBI	CACGTC	1 cut(s)	457
BmgT120I	GGNCC	8 cut(s)	132, 414, 535, 642, 1058, 1117, 1276, 1451
BmiI	GGNNCC	7 cut(s)	12, 124, 332, 415, 452, 477, 643
BmrFI	CCNGG	6 cut(s)	120, 154, 175, 473, 1056, 1659
BmsI	GCATC	4 cut(s)	276, 548, 831, 1030
BpiI	GAAGAC	1 cut(s)	1082
BpmI	CTGGAG	2 cut(s)	70, 1285
BpuEI	CTTGAG	2 cut(s)	968, 1301
BpuMI	CCSGG	2 cut(s)	120, 154
Bsa29I	ATCGAT	1 cut(s)	800
BsaHI	GRCGYC	4 cut(s)	11, 123, 476, 617
BsaI	GGTCTC	2 cut(s)	1901, 2114
BsaJI	CCNNGG	7 cut(s)	118, 420, 591, 600, 666, 830, 2053
BsaWI	WCCGGW	2 cut(s)	1060, 1892
BsaXI	ACNNNNNCTCC	3 cut(s)	68, 98, 2115
Bsc4I	CCNNNNNNNGG	7 cut(s)	180, 306, 410, 1198, 1498, 1879, 1906
Bse118I	RCCGGY	2 cut(s)	286, 1892
Bse1I	ACTGG	3 cut(s)	87, 624, 830
Bse3DI	GCAATG	1 cut(s)	700
BseBI	CCWGG	4 cut(s)	175, 473, 1056, 1659
BseCI	ATCGAT	1 cut(s)	800
BseDI	CCNNGG	7 cut(s)	118, 420, 591, 600, 666, 830, 2053
BseGI	GGATG	6 cut(s)	563, 846, 865, 1153, 1333, 1361
BseLI	CCNNNNNNNGG	7 cut(s)	180, 306, 410, 1198, 1498, 1879, 1906
BseMI	GCAATG	1 cut(s)	700
BseMII	CTCAG	1 cut(s)	1926
BseNI	ACTGG	3 cut(s)	87, 624, 830
BseRI	GAGGAG	2 cut(s)	644, 647
BseX3I	CGGCCG	1 cut(s)	288
BseXI	GCAGC	6 cut(s)	126, 339, 471, 583, 928, 986
BsgI	GTGCAG	1 cut(s)	869
Bsh1236I	CGCG	3 cut(s)	307, 540, 1696
Bsh1285I	CGRYCG	2 cut(s)	130, 291
BshFI	GGCC	6 cut(s)	243, 290, 829, 1031, 1277, 1910
BshNI	GGYRCC	3 cut(s)	10, 122, 475
BshTI	ACCGGT	1 cut(s)	1892
BshVI	ATCGAT	1 cut(s)	800
BsiEI	CGRYCG	2 cut(s)	130, 291
BsiHKAI	GWGCWC	4 cut(s)	348, 369, 555, 1345
BsiHKCI	CYCGRG	1 cut(s)	590
BsiSI	CCGG	7 cut(s)	8, 120, 154, 287, 577, 1061, 1893
BslFI	GGGAC	3 cut(s)	655, 795, 1700
BslI	CCNNNNNNNGG	7 cut(s)	180, 306, 410, 1198, 1498, 1879, 1906
BsmAI	GTCTC	5 cut(s)	9, 46, 1901, 1940, 2114
BsmFI	GGGAC	3 cut(s)	655, 795, 1700
BsmI	GAATGC	1 cut(s)	1444
BsnI	GGCC	6 cut(s)	243, 290, 829, 1031, 1277, 1910
Bso31I	GGTCTC	2 cut(s)	1901, 2114
BsoBI	CYCGRG	1 cut(s)	590
Bsp1286I	GDGCHC	4 cut(s)	348, 369, 555, 1345
Bsp143I	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
Bsp19I	CCATGG	2 cut(s)	600, 666
BspANI	GGCC	6 cut(s)	243, 290, 829, 1031, 1277, 1910
BspCNI	CTCAG	1 cut(s)	1925
BspDI	ATCGAT	1 cut(s)	800
BspFNI	CGCG	3 cut(s)	307, 540, 1696
BspLI	GGNNCC	7 cut(s)	12, 124, 332, 415, 452, 477, 643
BspMAI	CTGCAG	2 cut(s)	489, 1173
BspMI	ACCTGC	2 cut(s)	841, 2119
BspPI	GGATC	3 cut(s)	575, 676, 2096
BspT107I	GGYRCC	3 cut(s)	10, 122, 475
BspTNI	GGTCTC	2 cut(s)	1901, 2114
BsrBI	CCGCTC	2 cut(s)	150, 1494
BsrDI	GCAATG	1 cut(s)	700
BsrFI	RCCGGY	2 cut(s)	286, 1892
BsrI	ACTGG	3 cut(s)	87, 624, 830
BssAI	RCCGGY	2 cut(s)	286, 1892
BssECI	CCNNGG	7 cut(s)	118, 420, 591, 600, 666, 830, 2053
BssMI	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
BssNI	GRCGYC	4 cut(s)	11, 123, 476, 617
BssT1I	CCWWGG	3 cut(s)	600, 666, 2053
Bst2UI	CCWGG	4 cut(s)	175, 473, 1056, 1659
BstACI	GRCGYC	4 cut(s)	11, 123, 476, 617
BstAPI	GCANNNNNTGC	1 cut(s)	1340
BstC8I	GCNNGC	8 cut(s)	163, 167, 288, 389, 1298, 1442, 1926, 2042
BstDEI	CTNAG	2 cut(s)	1912, 1953
BstDSI	CCRYGG	2 cut(s)	600, 666
BstF5I	GGATG	6 cut(s)	563, 846, 865, 1153, 1333, 1361
BstFNI	CGCG	3 cut(s)	307, 540, 1696
BstH2I	RGCGCY	4 cut(s)	14, 126, 162, 479
BstHHI	GCGC	4 cut(s)	13, 125, 161, 478
BstKTI	GATC	9 cut(s)	111, 130, 339, 570, 684, 1108, 1832, 1933, 2091
BstMAI	GTCTC	5 cut(s)	9, 46, 1901, 1940, 2114
BstMBI	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
BstMCI	CGRYCG	2 cut(s)	130, 291
BstNI	CCWGG	4 cut(s)	175, 473, 1056, 1659
BstNSI	RCATGY	1 cut(s)	1474
BstSCI	CCNGG	6 cut(s)	118, 152, 173, 471, 1054, 1657
BstSFI	CTRYAG	2 cut(s)	485, 1169
BstUI	CGCG	3 cut(s)	307, 540, 1696
BstV1I	GCAGC	6 cut(s)	126, 339, 471, 583, 928, 986
BstV2I	GAAGAC	1 cut(s)	1082
BstX2I	RGATCY	1 cut(s)	681
BstYI	RGATCY	1 cut(s)	681
BstZI	CGGCCG	1 cut(s)	288
Bsu15I	ATCGAT	1 cut(s)	800
BsuRI	GGCC	6 cut(s)	243, 290, 829, 1031, 1277, 1910
BsuTUI	ATCGAT	1 cut(s)	800
BtgI	CCRYGG	2 cut(s)	600, 666
BtgZI	GCGATG	2 cut(s)	253, 1421
BtrI	CACGTC	1 cut(s)	457
BtsCI	GGATG	6 cut(s)	563, 846, 865, 1153, 1333, 1361
BtsIMutI	CAGTG	2 cut(s)	631, 1601
BveI	ACCTGC	2 cut(s)	841, 2119
Cac8I	GCNNGC	8 cut(s)	163, 167, 288, 389, 1298, 1442, 1926, 2042
CfoI	GCGC	4 cut(s)	13, 125, 161, 478
Cfr10I	RCCGGY	2 cut(s)	286, 1892
Cfr13I	GGNCC	8 cut(s)	132, 414, 535, 642, 1058, 1117, 1276, 1451
ClaI	ATCGAT	1 cut(s)	800
CpoI	CGGWCCG	1 cut(s)	132
CseI	GACGC	2 cut(s)	529, 625
Csp6I	GTAC	3 cut(s)	607, 905, 1251
CspAI	ACCGGT	1 cut(s)	1892
CspCI	CAANNNNNGTGG	2 cut(s)	20, 55
CspI	CGGWCCG	1 cut(s)	132
CviAII	CATG	9 cut(s)	601, 667, 994, 1324, 1471, 1609, 1638, 1741, 1765
CviQI	GTAC	3 cut(s)	607, 905, 1251
DdeI	CTNAG	2 cut(s)	1912, 1953
DinI	GGCGCC	3 cut(s)	12, 124, 477
DpnI	GATC	9 cut(s)	110, 129, 338, 569, 683, 1107, 1831, 1932, 2090
DpnII	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
DrdI	GACNNNNNNGTC	3 cut(s)	412, 1129, 1328
DseDI	GACNNNNNNGTC	3 cut(s)	412, 1129, 1328
EaeI	YGGCCR	3 cut(s)	288, 827, 1029
EagI	CGGCCG	1 cut(s)	288
EciI	GGCGGA	3 cut(s)	286, 390, 406
Ecl136II	GAGCTC	1 cut(s)	367
EclXI	CGGCCG	1 cut(s)	288
Eco130I	CCWWGG	3 cut(s)	600, 666, 2053
Eco24I	GRGCYC	1 cut(s)	369
Eco31I	GGTCTC	2 cut(s)	1901, 2114
Eco32I	GATATC	1 cut(s)	1770
Eco47I	GGWCC	7 cut(s)	132, 414, 535, 642, 1058, 1117, 1451
Eco52I	CGGCCG	1 cut(s)	288
Eco53kI	GAGCTC	1 cut(s)	367
Eco57I	CTGAAG	1 cut(s)	921
Eco88I	CYCGRG	1 cut(s)	590
EcoICRI	GAGCTC	1 cut(s)	367
EcoRI	GAATTC	1 cut(s)	2058
EcoRII	CCWGG	4 cut(s)	173, 471, 1054, 1657
EcoRV	GATATC	1 cut(s)	1770
EcoT14I	CCWWGG	3 cut(s)	600, 666, 2053
EcoT38I	GRGCYC	1 cut(s)	369
EgeI	GGCGCC	3 cut(s)	12, 124, 477
EheI	GGCGCC	3 cut(s)	12, 124, 477
ErhI	CCWWGG	3 cut(s)	600, 666, 2053
FaeI	CATG	9 cut(s)	604, 670, 997, 1327, 1474, 1612, 1641, 1744, 1768
FalI	AAGNNNNNCTT	2 cut(s)	1117, 1149
FaqI	GGGAC	3 cut(s)	655, 795, 1700
FatI	CATG	9 cut(s)	600, 666, 993, 1323, 1470, 1608, 1637, 1740, 1764
FauI	CCCGC	2 cut(s)	170, 1696
FauNDI	CATATG	1 cut(s)	1798
FokI	GGATG	6 cut(s)	570, 853, 872, 1160, 1340, 1368
FriOI	GRGCYC	1 cut(s)	369
FspBI	CTAG	3 cut(s)	1109, 1943, 2099
GlaI	GCGC	4 cut(s)	12, 124, 160, 477
GsuI	CTGGAG	2 cut(s)	70, 1285
HaeII	RGCGCY	4 cut(s)	14, 126, 162, 479
HaeIII	GGCC	6 cut(s)	243, 290, 829, 1031, 1277, 1910
HapII	CCGG	7 cut(s)	8, 120, 154, 287, 577, 1061, 1893
HgaI	GACGC	2 cut(s)	529, 625
HhaI	GCGC	4 cut(s)	13, 125, 161, 478
Hin1I	GRCGYC	4 cut(s)	11, 123, 476, 617
Hin1II	CATG	9 cut(s)	604, 670, 997, 1327, 1474, 1612, 1641, 1744, 1768
Hin6I	GCGC	4 cut(s)	11, 123, 159, 476
HinP1I	GCGC	4 cut(s)	11, 123, 159, 476
HincII	GTYRAC	2 cut(s)	1483, 2022
HindII	GTYRAC	2 cut(s)	1483, 2022
HindIII	AAGCTT	3 cut(s)	720, 1553, 2038
HpaII	CCGG	7 cut(s)	8, 120, 154, 287, 577, 1061, 1893
HphI	GGTGA	5 cut(s)	91, 487, 788, 1513, 1741
Hpy166II	GTNNAC	6 cut(s)	535, 790, 1141, 1397, 1483, 2022
Hpy8I	GTNNAC	6 cut(s)	535, 790, 1141, 1397, 1483, 2022
Hpy99I	CGWCG	8 cut(s)	80, 107, 242, 307, 374, 409, 619, 811
HpyAV	CCTTC	8 cut(s)	223, 244, 502, 1510, 1556, 1694, 1733, 1987
HpyCH4IV	ACGT	3 cut(s)	456, 501, 2093
HpyCH4V	TGCA	8 cut(s)	487, 507, 679, 693, 770, 850, 1171, 1459
HpyF3I	CTNAG	2 cut(s)	1912, 1953
HpySE526I	ACGT	3 cut(s)	456, 501, 2093
Hsp92I	GRCGYC	4 cut(s)	11, 123, 476, 617
Hsp92II	CATG	9 cut(s)	604, 670, 997, 1327, 1474, 1612, 1641, 1744, 1768
HspAI	GCGC	4 cut(s)	11, 123, 159, 476
KasI	GGCGCC	3 cut(s)	10, 122, 475
KroI	GCCGGC	1 cut(s)	286
KroNI	GCCGGC	1 cut(s)	288
Kzo9I	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
LmnI	GCTCC	3 cut(s)	155, 156, 456
Lsp1109I	GCAGC	6 cut(s)	126, 339, 471, 583, 928, 986
LweI	GCATC	4 cut(s)	276, 548, 831, 1030
MaeI	CTAG	3 cut(s)	1109, 1943, 2099
MaeII	ACGT	3 cut(s)	456, 501, 2093
MaeIII	GTNAC	6 cut(s)	89, 223, 736, 1507, 1747, 1810
MalI	GATC	9 cut(s)	110, 129, 338, 569, 683, 1107, 1831, 1932, 2090
MbiI	CCGCTC	2 cut(s)	150, 1494
MboI	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
MboII	GAAGA	7 cut(s)	331, 1027, 1084, 1087, 1589, 1839, 1986
MflI	RGATCY	1 cut(s)	681
MhlI	GDGCHC	4 cut(s)	348, 369, 555, 1345
MlsI	TGGCCA	1 cut(s)	1031
MluNI	TGGCCA	1 cut(s)	1031
Mly113I	GGCGCC	3 cut(s)	11, 123, 476
MlyI	GAGTC	6 cut(s)	287, 327, 471, 591, 1415, 1874
MmeI	TCCRAC	1 cut(s)	220
Mox20I	TGGCCA	1 cut(s)	1031
MroNI	GCCGGC	1 cut(s)	286
MscI	TGGCCA	1 cut(s)	1031
MseI	TTAA	5 cut(s)	188, 381, 1011, 1245, 2137
MslI	CAYNNNNRTG	3 cut(s)	548, 1350, 1801
Msp20I	TGGCCA	1 cut(s)	1031
MspA1I	CMGCKG	2 cut(s)	484, 1256
MspI	CCGG	7 cut(s)	8, 120, 154, 287, 577, 1061, 1893
MspR9I	CCNGG	6 cut(s)	120, 154, 175, 473, 1056, 1659
Mva1269I	GAATGC	1 cut(s)	1444
MvaI	CCWGG	4 cut(s)	175, 473, 1056, 1659
MvnI	CGCG	3 cut(s)	307, 540, 1696
NaeI	GCCGGC	1 cut(s)	288
NarI	GGCGCC	3 cut(s)	11, 123, 476
NciI	CCSGG	2 cut(s)	120, 154
NcoI	CCATGG	2 cut(s)	600, 666
NdeI	CATATG	1 cut(s)	1798
NdeII	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
NgoMIV	GCCGGC	1 cut(s)	286
NlaIII	CATG	9 cut(s)	604, 670, 997, 1327, 1474, 1612, 1641, 1744, 1768
NlaIV	GGNNCC	7 cut(s)	12, 124, 332, 415, 452, 477, 643
NmeAIII	GCCGAG	2 cut(s)	445, 855
NmuCI	GTSAC	3 cut(s)	89, 1507, 1747
NspI	RCATGY	1 cut(s)	1474
PcsI	WCGNNNNNNNCGW	3 cut(s)	72, 243, 276
PctI	GAATGC	1 cut(s)	1444
PdiI	GCCGGC	1 cut(s)	288
PfeI	GAWTC	6 cut(s)	80, 281, 432, 863, 979, 1916
PflFI	GACNNNGTC	3 cut(s)	539, 619, 948
PfoI	TCCNGGA	2 cut(s)	152, 1657
PinAI	ACCGGT	1 cut(s)	1892
Ple19I	CGATCG	1 cut(s)	130
PleI	GAGTC	6 cut(s)	287, 326, 470, 590, 1414, 1873
PluTI	GGCGCC	3 cut(s)	14, 126, 479
PpsI	GAGTC	6 cut(s)	287, 326, 470, 590, 1414, 1873
PsiI	TTATAA	1 cut(s)	893
Psp124BI	GAGCTC	1 cut(s)	369
Psp6I	CCWGG	4 cut(s)	173, 471, 1054, 1657
PspGI	CCWGG	4 cut(s)	173, 471, 1054, 1657
PspN4I	GGNNCC	7 cut(s)	12, 124, 332, 415, 452, 477, 643
PspPI	GGNCC	8 cut(s)	132, 414, 535, 642, 1058, 1117, 1276, 1451
PstI	CTGCAG	2 cut(s)	489, 1173
PsuI	RGATCY	1 cut(s)	681
PsyI	GACNNNGTC	3 cut(s)	539, 619, 948
PvuI	CGATCG	1 cut(s)	130
PvuII	CAGCTG	1 cut(s)	1256
RsaI	GTAC	3 cut(s)	608, 906, 1252
RsaNI	GTAC	3 cut(s)	607, 905, 1251
RseI	CAYNNNNRTG	3 cut(s)	548, 1350, 1801
Rsr2I	CGGWCCG	1 cut(s)	132
RsrII	CGGWCCG	1 cut(s)	132
SacI	GAGCTC	1 cut(s)	369
SaqAI	TTAA	5 cut(s)	188, 381, 1011, 1245, 2137
Sau3AI	GATC	9 cut(s)	108, 127, 336, 567, 681, 1105, 1829, 1930, 2088
Sau96I	GGNCC	8 cut(s)	132, 414, 535, 642, 1058, 1117, 1276, 1451
SchI	GAGTC	6 cut(s)	287, 327, 471, 591, 1415, 1874
ScrFI	CCNGG	6 cut(s)	120, 154, 175, 473, 1056, 1659
SduI	GDGCHC	4 cut(s)	348, 369, 555, 1345
SfaNI	GCATC	4 cut(s)	276, 548, 831, 1030
SfcI	CTRYAG	2 cut(s)	485, 1169
SfoI	GGCGCC	3 cut(s)	12, 124, 477
SinI	GGWCC	7 cut(s)	132, 414, 535, 642, 1058, 1117, 1451
SmiMI	CAYNNNNRTG	3 cut(s)	548, 1350, 1801
SmlI	CTYRAG	2 cut(s)	983, 1280
SmoI	CTYRAG	2 cut(s)	983, 1280
SspDI	GGCGCC	3 cut(s)	10, 122, 475
SspMI	CTAG	3 cut(s)	1109, 1943, 2099
SstI	GAGCTC	1 cut(s)	369
StyD4I	CCNGG	6 cut(s)	118, 152, 173, 471, 1054, 1657
StyI	CCWWGG	3 cut(s)	600, 666, 2053
TaiI	ACGT	3 cut(s)	459, 504, 2096
TaqI	TCGA	4 cut(s)	105, 800, 1038, 2112
TaqII	GACCGA	1 cut(s)	659
TatI	WGTACW	2 cut(s)	606, 904
TauI	GCSGC	5 cut(s)	209, 267, 310, 481, 484
TfiI	GAWTC	6 cut(s)	80, 281, 432, 863, 979, 1916
Tru1I	TTAA	5 cut(s)	188, 381, 1011, 1245, 2137
Tru9I	TTAA	5 cut(s)	188, 381, 1011, 1245, 2137
TscAI	CASTG	2 cut(s)	631, 1608
TseFI	GTSAC	3 cut(s)	89, 1507, 1747
TseI	GCWGC	6 cut(s)	114, 352, 484, 596, 916, 999
Tsp45I	GTSAC	3 cut(s)	89, 1507, 1747
TspDTI	ATGAA	7 cut(s)	762, 1164, 1354, 1563, 1689, 1785, 1872
TspGWI	ACGGA	2 cut(s)	211, 1660
TspRI	CASTG	2 cut(s)	631, 1608
Tth111I	GACNNNGTC	3 cut(s)	539, 619, 948
VpaK11BI	GGWCC	7 cut(s)	132, 414, 535, 642, 1058, 1117, 1451
XapI	RAATTY	4 cut(s)	191, 1522, 1754, 2058
XceI	RCATGY	1 cut(s)	1474
XspI	CTAG	3 cut(s)	1109, 1943, 2099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.