Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0013542

Physical Location & Seq

Genomic Coordinates Forward (+)

48831874 .. 48835155

Gene Structure 3282 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG269800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGTCTCCGGCGCCGAACAACCCAGAGTTTCAAGAATGGTGGAACAAGCAGAGACAAACCAACCACGAAAACGGCGACGATTCCTCCAGTCACTTGCTCACCGTCGAGATCAGCAGCCCCGGCGCCGATCGGACCGTCGGCAAAGACCGCTCCCGGAGCGCCCGCCAGCTCTCCTGGCTCTGGCTATTAAAACTGCAACAAATCGCCGCCTCCTTCGCCTCCGTCACCAATTCCTTCGTCGGCCTCGTCCGCACCGCCAACCGCCGCATCGCCTCGCCCGATTCGCCGGCCGACTCCGCCTCGTCGCGGCTCTACCGAGTCATCAAGGGGTTCCTGATCTTCGTGCTCTTGCTGCTCTGCGTTGAGCTCGTCGCCTACTTTAAGGGCTGGCATTTCAGTCCGCCGACGGTGGGGTCCGCCGAGGTCATCGGAATCGTATATGCGAATTGGCTCCACGTCAGAGTCAATTACCTGGCACCGCCGCTGCAGACCTTCACCAACGTCTGCATTGTGCTGTTTCTGATACAGTCGGTGGACCGCGTCATTCTGGTGCTCGGATGCTTCTGGATCAAGTTCCGGCGAGTCAAGCCCAAGGCCGCCATGGAGTACAAAACGACGCCGTCCAGTGAGGAGGAGGGTGGGACTGAGAATGTGGAGGATTATCCCATGGTGTTGTTGCAGATCCCTATGTGCAATGAGAGGGAGGTTTACCATCAATCGATTGCCACGGTTTGTATTCAGGACTGGCCGAGGGAGAGGATGCTTGTGCAGGTTTTGGATGATTCCGATGATTTAGATGTTCAGCTTCTTATCAAGGCTGAAGTACAAAAGTGGCAGCAAAGGGGTGTTCCCATAGTGTATAGACATCGTCTTATACGCACAGGGTATAAGGCAGGGAATCTCAAGTCTGCCATGAGCTGTGATTATGTTAAGAATTATGAGTTTGTGGCCATCTTCGATGCTGATTTTCAGCCAGGACCGGACTTCTTGAAGAAGACCATTCCTTATTTCAAGGGGAATGATGATCTAGGATTGGTCCAGACAAGGTGGTCTTTTGTAAACAAGGATGAAAACTTGCTTACCAGACTGCAGAATATAAACTTATCGTTCCACTTTGAGGTTGAACAACAAGTCAATGGTGAGTATATCAACTTCTTTGGTTTTAACGGTACAGCTGGTGTCTGGAGGATTACGGCCCTTGAGGAATGTGGTGGCTGGCTGGAAAGAACTACTGTTGAGGACATGGATGTCGCAGTTCGTGCTCATCTTTGTGGATGGAAGTTCATATATTTGAATGATGTCAAGTGCCTTTGTGAACTTCCAGAGTCCTATGAGGCATACAAGAAACAGCAACATCGCTGGCATTCTGGTCCAATGCAGTTATTCCGCATGTGCTTCGTTGACATACTCCGCTCAAAGGTGAGTGTGACCAAGAAGGCAAATTTGATATTTCTCTTTTTCCTCCTTCGGAAGCTTATACTGCCGTTTTATTCATTCACTCTATTTTGTATCATTCTTCCACTGACCATGTTCCTGCCAGAAGCTCAAATACCAGCATGGGTGGTTTGTTATGTTCCTGGAATTATGTCCGTCTTGAATATCCTTCCTGCACCGCGTTCATTCCCCTTTATCGTCCCTTACCTTCTCTTTGAGAATACCATGTCTGTCACCAAATTCAATGCCATGATATCAGGCTTGTTTCAGTTTGGAAGTTCATATGAGTGGATAGTTACAAAGAAATTAGGAAGATCATCAGAAGCAGATTTAGTTGCTTATGAAAAGGAGTCTGACCCTCTATTGGAAACTACTACCGGTCTTCAGAGATCGGCCTCAGAATCAGGGCTTGCTGATCTGACTAAACTAGGGACATCTAAGAAAAGTGGCAAAAGGAGAAGAAACCGTTTATATAGGAAGGAACTTGTAATAGCCTTTATATTGTTGACAGCTTCGGCAAGAAGCTTGCTGTCTGCCCAAGGAATTCACTTTTACTTCCTACTATTTCAAGGGATCACCTTTCTAGTTGTTGGTCTCGATTTGATTGGAGAGCAGGTTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0009856 GO:0012505 GO:0022414 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0048856 GO:0048868 GO:0051704 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

685

Amino Acids

78.25

Weight (kDa)

8.61

Isoelectric Point (pI)

45.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_tranf_2_3	PF13641	223 - 455	2.2e-12	Glycosyltransferase like family 2
Glycos_transf_2	PF00535	228 - 386	4.4e-07	Glycosyl transferase family 2
Glyco_trans_2_3	PF13632	316 - 512	1.1e-15	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07330 AT3G07330
fragaria_vesca	FvH4_2g18120
malus_domestica	MD05G1166000.v1.1 MD10G1156200.v1.1
prunus_persica	Prupe.8G194000_v2.0.a1
pyrus_communis	pycom05g15460 pycom10g13440
rosa_chinensis	RchiOBHm_Chr6g0283521
rosa_laevigata	RLG00000012820
rosa_multiflora	Rmu_sc0005719.1_g000002 Rmu_sc0007194.1_g000007
rosa_roxburghii	Rroxscaffold_7G00185470
rosa_rugosa	Rorug06G0155100
rosa_samantha	Rh6AG267300 Rh6BG269800 Rh6CG269600
rosa_wichuraiana	Rw6G023140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	412, 1048, 1247
Acc36I	ACCTGC	2 cut(s)	760, 2038
AccB1I	GGYRCC	3 cut(s)	10, 122, 475
AccBSI	CCGCTC	2 cut(s)	150, 1413
AccII	CGCG	3 cut(s)	307, 540, 1615
AclWI	GGATC	3 cut(s)	575, 676, 2015
AcoI	YGGCCR	3 cut(s)	288, 746, 948
AcsI	RAATTY	3 cut(s)	1441, 1673, 1977
AcuI	CTGAAG	2 cut(s)	840, 1802
AcyI	GRCGYC	3 cut(s)	11, 123, 617
AfaI	GTAC	3 cut(s)	608, 825, 1171
AfiI	CCNNNNNNNGG	6 cut(s)	180, 306, 410, 1117, 1417, 1798
AgeI	ACCGGT	1 cut(s)	1811
AgsI	TTSAA	8 cut(s)	32, 991, 1012, 1124, 1294, 1597, 1678, 2003
AjiI	CACGTC	1 cut(s)	457
AjnI	CCWGG	4 cut(s)	173, 471, 973, 1576
AluBI	AGCT	9 cut(s)	169, 367, 805, 918, 1175, 1474, 1544, 1946, 1959
AluI	AGCT	9 cut(s)	169, 367, 805, 918, 1175, 1474, 1544, 1946, 1959
Alw21I	GWGCWC	4 cut(s)	348, 369, 555, 1264
Alw26I	GTCTC	3 cut(s)	9, 46, 2033
AlwI	GGATC	3 cut(s)	575, 676, 2015
AoxI	GGCC	7 cut(s)	241, 288, 594, 746, 948, 1194, 1827
ApeKI	GCWGC	4 cut(s)	114, 352, 484, 835
ApoI	RAATTY	3 cut(s)	1441, 1673, 1977
AsiGI	ACCGGT	1 cut(s)	1811
AspLEI	GCGC	3 cut(s)	13, 125, 161
AspS9I	GGNCC	7 cut(s)	132, 414, 535, 977, 1036, 1195, 1370
AsuC2I	CCSGG	2 cut(s)	120, 154
AsuHPI	GGTGA	7 cut(s)	91, 217, 487, 1151, 1432, 1660, 2002
AvaII	GGWCC	6 cut(s)	132, 414, 535, 977, 1036, 1370
BalI	TGGCCA	1 cut(s)	950
BanI	GGYRCC	3 cut(s)	10, 122, 475
BanII	GRGCYC	1 cut(s)	369
BarI	GAAGNNNNNNTAC	4 cut(s)	1136, 1168, 1533, 1565
BbsI	GAAGAC	2 cut(s)	1001, 1808
Bbv12I	GWGCWC	4 cut(s)	348, 369, 555, 1264
BbvI	GCAGC	4 cut(s)	126, 339, 471, 847
BccI	CCATC	3 cut(s)	720, 959, 1269
BceAI	ACGGC	4 cut(s)	88, 604, 1209, 1468
BcgI	CGANNNNNNTGC	2 cut(s)	1378, 1412
BciT130I	CCWGG	4 cut(s)	175, 473, 975, 1578
BcnI	CCSGG	2 cut(s)	120, 154
BcoDI	GTCTC	3 cut(s)	9, 46, 2033
BfaI	CTAG	3 cut(s)	1028, 1862, 2018
BfmI	CTRYAG	2 cut(s)	485, 1088
BfoI	RGCGCY	3 cut(s)	14, 126, 162
BfuAI	ACCTGC	2 cut(s)	760, 2038
BisI	GCNGC	9 cut(s)	115, 207, 265, 308, 353, 482, 485, 597, 836
BlsI	GCNGC	9 cut(s)	116, 208, 266, 309, 354, 483, 486, 598, 837
Bme1390I	CCNGG	6 cut(s)	120, 154, 175, 473, 975, 1578
Bme18I	GGWCC	6 cut(s)	132, 414, 535, 977, 1036, 1370
BmgBI	CACGTC	1 cut(s)	457
BmgT120I	GGNCC	7 cut(s)	132, 414, 535, 977, 1036, 1195, 1370
BmiI	GGNNCC	6 cut(s)	12, 124, 332, 415, 452, 477
BmrFI	CCNGG	6 cut(s)	120, 154, 175, 473, 975, 1578
BmsI	GCATC	4 cut(s)	276, 548, 750, 949
BpiI	GAAGAC	2 cut(s)	1001, 1808
BpmI	CTGGAG	2 cut(s)	70, 1204
BpuEI	CTTGAG	2 cut(s)	887, 1220
BpuMI	CCSGG	2 cut(s)	120, 154
Bsa29I	ATCGAT	1 cut(s)	719
BsaHI	GRCGYC	3 cut(s)	11, 123, 617
BsaI	GGTCTC	1 cut(s)	2033
BsaJI	CCNNGG	8 cut(s)	118, 420, 591, 600, 666, 726, 749, 1972
BsaWI	WCCGGW	2 cut(s)	979, 1811
BsaXI	ACNNNNNCTCC	3 cut(s)	68, 98, 2034
Bsc4I	CCNNNNNNNGG	6 cut(s)	180, 306, 410, 1117, 1417, 1798
Bse118I	RCCGGY	2 cut(s)	286, 1811
Bse1I	ACTGG	3 cut(s)	87, 624, 749
Bse3DI	GCAATG	1 cut(s)	700
BseBI	CCWGG	4 cut(s)	175, 473, 975, 1578
BseCI	ATCGAT	1 cut(s)	719
BseDI	CCNNGG	8 cut(s)	118, 420, 591, 600, 666, 726, 749, 1972
BseGI	GGATG	6 cut(s)	563, 765, 784, 1072, 1252, 1280
BseLI	CCNNNNNNNGG	6 cut(s)	180, 306, 410, 1117, 1417, 1798
BseMI	GCAATG	1 cut(s)	700
BseMII	CTCAG	2 cut(s)	636, 1845
BseNI	ACTGG	3 cut(s)	87, 624, 749
BseRI	GAGGAG	2 cut(s)	644, 647
BseX3I	CGGCCG	1 cut(s)	288
BseXI	GCAGC	4 cut(s)	126, 339, 471, 847
BsgI	GTGCAG	2 cut(s)	788, 1593
Bsh1236I	CGCG	3 cut(s)	307, 540, 1615
Bsh1285I	CGRYCG	2 cut(s)	130, 291
BshFI	GGCC	7 cut(s)	243, 290, 596, 748, 950, 1196, 1829
BshNI	GGYRCC	3 cut(s)	10, 122, 475
BshTI	ACCGGT	1 cut(s)	1811
BshVI	ATCGAT	1 cut(s)	719
BsiEI	CGRYCG	2 cut(s)	130, 291
BsiHKAI	GWGCWC	4 cut(s)	348, 369, 555, 1264
BsiSI	CCGG	7 cut(s)	8, 120, 154, 287, 577, 980, 1812
BslFI	GGGAC	3 cut(s)	655, 1619, 1879
BslI	CCNNNNNNNGG	6 cut(s)	180, 306, 410, 1117, 1417, 1798
BsmAI	GTCTC	3 cut(s)	9, 46, 2033
BsmFI	GGGAC	3 cut(s)	655, 1619, 1879
BsmI	GAATGC	1 cut(s)	1363
BsnI	GGCC	7 cut(s)	243, 290, 596, 748, 950, 1196, 1829
Bso31I	GGTCTC	1 cut(s)	2033
Bsp1286I	GDGCHC	4 cut(s)	348, 369, 555, 1264
Bsp19I	CCATGG	2 cut(s)	600, 666
BspANI	GGCC	7 cut(s)	243, 290, 596, 748, 950, 1196, 1829
BspCNI	CTCAG	2 cut(s)	637, 1844
BspDI	ATCGAT	1 cut(s)	719
BspFNI	CGCG	3 cut(s)	307, 540, 1615
BspLI	GGNNCC	6 cut(s)	12, 124, 332, 415, 452, 477
BspMAI	CTGCAG	2 cut(s)	489, 1092
BspMI	ACCTGC	2 cut(s)	760, 2038
BspPI	GGATC	3 cut(s)	575, 676, 2015
BspT107I	GGYRCC	3 cut(s)	10, 122, 475
BspTNI	GGTCTC	1 cut(s)	2033
BsrBI	CCGCTC	2 cut(s)	150, 1413
BsrDI	GCAATG	1 cut(s)	700
BsrFI	RCCGGY	2 cut(s)	286, 1811
BsrI	ACTGG	3 cut(s)	87, 624, 749
BssAI	RCCGGY	2 cut(s)	286, 1811
BssECI	CCNNGG	8 cut(s)	118, 420, 591, 600, 666, 726, 749, 1972
BssNI	GRCGYC	3 cut(s)	11, 123, 617
BssT1I	CCWWGG	4 cut(s)	591, 600, 666, 1972
Bst2UI	CCWGG	4 cut(s)	175, 473, 975, 1578
Bst4CI	ACNGT	8 cut(s)	103, 136, 409, 528, 730, 1169, 1234, 1901
BstACI	GRCGYC	3 cut(s)	11, 123, 617
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstC8I	GCNNGC	8 cut(s)	163, 167, 288, 389, 1217, 1361, 1845, 1961
BstDEI	CTNAG	3 cut(s)	645, 1831, 1872
BstDSI	CCRYGG	3 cut(s)	600, 666, 726
BstF5I	GGATG	6 cut(s)	563, 765, 784, 1072, 1252, 1280
BstFNI	CGCG	3 cut(s)	307, 540, 1615
BstH2I	RGCGCY	3 cut(s)	14, 126, 162
BstHHI	GCGC	3 cut(s)	13, 125, 161
BstMAI	GTCTC	3 cut(s)	9, 46, 2033
BstMCI	CGRYCG	2 cut(s)	130, 291
BstNI	CCWGG	4 cut(s)	175, 473, 975, 1578
BstNSI	RCATGY	1 cut(s)	1393
BstSCI	CCNGG	6 cut(s)	118, 152, 173, 471, 973, 1576
BstSFI	CTRYAG	2 cut(s)	485, 1088
BstUI	CGCG	3 cut(s)	307, 540, 1615
BstV1I	GCAGC	4 cut(s)	126, 339, 471, 847
BstV2I	GAAGAC	2 cut(s)	1001, 1808
BstX2I	RGATCY	1 cut(s)	681
BstYI	RGATCY	1 cut(s)	681
BstZI	CGGCCG	1 cut(s)	288
Bsu15I	ATCGAT	1 cut(s)	719
BsuRI	GGCC	7 cut(s)	243, 290, 596, 748, 950, 1196, 1829
BsuTUI	ATCGAT	1 cut(s)	719
BtgI	CCRYGG	3 cut(s)	600, 666, 726
BtgZI	GCGATG	2 cut(s)	253, 1340
BtrI	CACGTC	1 cut(s)	457
BtsCI	GGATG	6 cut(s)	563, 765, 784, 1072, 1252, 1280
BtsIMutI	CAGTG	2 cut(s)	631, 1520
BveI	ACCTGC	2 cut(s)	760, 2038
Cac8I	GCNNGC	8 cut(s)	163, 167, 288, 389, 1217, 1361, 1845, 1961
CfoI	GCGC	3 cut(s)	13, 125, 161
Cfr10I	RCCGGY	2 cut(s)	286, 1811
Cfr13I	GGNCC	7 cut(s)	132, 414, 535, 977, 1036, 1195, 1370
ClaI	ATCGAT	1 cut(s)	719
CpoI	CGGWCCG	1 cut(s)	132
CseI	GACGC	2 cut(s)	529, 625
Csp6I	GTAC	3 cut(s)	607, 824, 1170
CspAI	ACCGGT	1 cut(s)	1811
CspCI	CAANNNNNGTGG	2 cut(s)	20, 55
CspI	CGGWCCG	1 cut(s)	132
CviAII	CATG	9 cut(s)	601, 667, 913, 1243, 1390, 1528, 1557, 1660, 1684
CviQI	GTAC	3 cut(s)	607, 824, 1170
DdeI	CTNAG	3 cut(s)	645, 1831, 1872
DinI	GGCGCC	2 cut(s)	12, 124
DrdI	GACNNNNNNGTC	3 cut(s)	412, 1048, 1247
DseDI	GACNNNNNNGTC	3 cut(s)	412, 1048, 1247
EaeI	YGGCCR	3 cut(s)	288, 746, 948
EagI	CGGCCG	1 cut(s)	288
EciI	GGCGGA	3 cut(s)	286, 390, 406
Ecl136II	GAGCTC	1 cut(s)	367
EclXI	CGGCCG	1 cut(s)	288
Eco130I	CCWWGG	4 cut(s)	591, 600, 666, 1972
Eco24I	GRGCYC	1 cut(s)	369
Eco31I	GGTCTC	1 cut(s)	2033
Eco32I	GATATC	1 cut(s)	1689
Eco47I	GGWCC	6 cut(s)	132, 414, 535, 977, 1036, 1370
Eco52I	CGGCCG	1 cut(s)	288
Eco53kI	GAGCTC	1 cut(s)	367
Eco57I	CTGAAG	2 cut(s)	840, 1802
EcoICRI	GAGCTC	1 cut(s)	367
EcoRI	GAATTC	1 cut(s)	1977
EcoRII	CCWGG	4 cut(s)	173, 471, 973, 1576
EcoRV	GATATC	1 cut(s)	1689
EcoT14I	CCWWGG	4 cut(s)	591, 600, 666, 1972
EcoT38I	GRGCYC	1 cut(s)	369
EgeI	GGCGCC	2 cut(s)	12, 124
EheI	GGCGCC	2 cut(s)	12, 124
ErhI	CCWWGG	4 cut(s)	591, 600, 666, 1972
FaeI	CATG	9 cut(s)	604, 670, 916, 1246, 1393, 1531, 1560, 1663, 1687
FalI	AAGNNNNNCTT	2 cut(s)	1036, 1068
FaqI	GGGAC	3 cut(s)	655, 1619, 1879
FatI	CATG	9 cut(s)	600, 666, 912, 1242, 1389, 1527, 1556, 1659, 1683
FauI	CCCGC	1 cut(s)	170
FauNDI	CATATG	1 cut(s)	1717
Fnu4HI	GCNGC	9 cut(s)	115, 207, 265, 308, 353, 482, 485, 597, 836
FokI	GGATG	6 cut(s)	570, 772, 791, 1079, 1259, 1287
FriOI	GRGCYC	1 cut(s)	369
Fsp4HI	GCNGC	9 cut(s)	115, 207, 265, 308, 353, 482, 485, 597, 836
FspBI	CTAG	3 cut(s)	1028, 1862, 2018
GlaI	GCGC	3 cut(s)	12, 124, 160
GluI	GCNGC	9 cut(s)	115, 207, 265, 308, 353, 482, 485, 597, 836
GsuI	CTGGAG	2 cut(s)	70, 1204
HaeII	RGCGCY	3 cut(s)	14, 126, 162
HaeIII	GGCC	7 cut(s)	243, 290, 596, 748, 950, 1196, 1829
HapII	CCGG	7 cut(s)	8, 120, 154, 287, 577, 980, 1812
HgaI	GACGC	2 cut(s)	529, 625
HhaI	GCGC	3 cut(s)	13, 125, 161
Hin1I	GRCGYC	3 cut(s)	11, 123, 617
Hin1II	CATG	9 cut(s)	604, 670, 916, 1246, 1393, 1531, 1560, 1663, 1687
Hin6I	GCGC	3 cut(s)	11, 123, 159
HinP1I	GCGC	3 cut(s)	11, 123, 159
HincII	GTYRAC	2 cut(s)	1402, 1941
HindII	GTYRAC	2 cut(s)	1402, 1941
HindIII	AAGCTT	2 cut(s)	1472, 1957
HpaII	CCGG	7 cut(s)	8, 120, 154, 287, 577, 980, 1812
HphI	GGTGA	7 cut(s)	91, 217, 487, 1151, 1432, 1660, 2002
Hpy166II	GTNNAC	6 cut(s)	535, 709, 1060, 1316, 1402, 1941
Hpy8I	GTNNAC	6 cut(s)	535, 709, 1060, 1316, 1402, 1941
Hpy99I	CGWCG	8 cut(s)	80, 107, 140, 242, 307, 374, 409, 619
HpyAV	CCTTC	8 cut(s)	223, 244, 502, 1429, 1475, 1613, 1652, 1906
HpyCH4III	ACNGT	8 cut(s)	103, 136, 409, 528, 730, 1169, 1234, 1901
HpyCH4IV	ACGT	2 cut(s)	456, 501
HpyCH4V	TGCA	9 cut(s)	196, 487, 507, 679, 693, 769, 1090, 1378, 1610
HpyF3I	CTNAG	3 cut(s)	645, 1831, 1872
HpySE526I	ACGT	2 cut(s)	456, 501
Hsp92I	GRCGYC	3 cut(s)	11, 123, 617
Hsp92II	CATG	9 cut(s)	604, 670, 916, 1246, 1393, 1531, 1560, 1663, 1687
HspAI	GCGC	3 cut(s)	11, 123, 159
KasI	GGCGCC	2 cut(s)	10, 122
KroI	GCCGGC	1 cut(s)	286
KroNI	GCCGGC	1 cut(s)	288
LmnI	GCTCC	3 cut(s)	155, 156, 456
Lsp1109I	GCAGC	4 cut(s)	126, 339, 471, 847
LweI	GCATC	4 cut(s)	276, 548, 750, 949
MaeI	CTAG	3 cut(s)	1028, 1862, 2018
MaeII	ACGT	2 cut(s)	456, 501
MaeIII	GTNAC	5 cut(s)	89, 223, 1426, 1666, 1729
MbiI	CCGCTC	2 cut(s)	150, 1413
MboII	GAAGA	8 cut(s)	331, 946, 1003, 1006, 1508, 1758, 1808, 1905
MflI	RGATCY	1 cut(s)	681
MhlI	GDGCHC	4 cut(s)	348, 369, 555, 1264
MlsI	TGGCCA	1 cut(s)	950
MluCI	AATT	9 cut(s)	229, 445, 466, 934, 1441, 1581, 1673, 1739, 1977
MluNI	TGGCCA	1 cut(s)	950
Mly113I	GGCGCC	2 cut(s)	11, 123
MlyI	GAGTC	6 cut(s)	287, 327, 471, 591, 1334, 1793
Mox20I	TGGCCA	1 cut(s)	950
MroNI	GCCGGC	1 cut(s)	286
MscI	TGGCCA	1 cut(s)	950
MseI	TTAA	5 cut(s)	188, 381, 930, 1164, 2056
MslI	CAYNNNNRTG	3 cut(s)	548, 1269, 1720
Msp20I	TGGCCA	1 cut(s)	950
MspA1I	CMGCKG	2 cut(s)	484, 1175
MspI	CCGG	7 cut(s)	8, 120, 154, 287, 577, 980, 1812
MspR9I	CCNGG	6 cut(s)	120, 154, 175, 473, 975, 1578
Mva1269I	GAATGC	1 cut(s)	1363
MvaI	CCWGG	4 cut(s)	175, 473, 975, 1578
MvnI	CGCG	3 cut(s)	307, 540, 1615
NaeI	GCCGGC	1 cut(s)	288
NarI	GGCGCC	2 cut(s)	11, 123
NciI	CCSGG	2 cut(s)	120, 154
NcoI	CCATGG	2 cut(s)	600, 666
NdeI	CATATG	1 cut(s)	1717
NgoMIV	GCCGGC	1 cut(s)	286
NlaIII	CATG	9 cut(s)	604, 670, 916, 1246, 1393, 1531, 1560, 1663, 1687
NlaIV	GGNNCC	6 cut(s)	12, 124, 332, 415, 452, 477
NmeAIII	GCCGAG	2 cut(s)	445, 774
NmuCI	GTSAC	4 cut(s)	89, 223, 1426, 1666
NspI	RCATGY	1 cut(s)	1393
PcsI	WCGNNNNNNNCGW	3 cut(s)	72, 243, 276
PctI	GAATGC	1 cut(s)	1363
PdiI	GCCGGC	1 cut(s)	288
PfeI	GAWTC	6 cut(s)	80, 281, 432, 782, 898, 1835
PflFI	GACNNNGTC	3 cut(s)	539, 619, 867
PfoI	TCCNGGA	2 cut(s)	152, 1576
PinAI	ACCGGT	1 cut(s)	1811
PkrI	GCNGC	9 cut(s)	116, 208, 266, 309, 354, 483, 486, 598, 837
Ple19I	CGATCG	1 cut(s)	130
PleI	GAGTC	6 cut(s)	287, 326, 470, 590, 1333, 1792
PluTI	GGCGCC	2 cut(s)	14, 126
PpsI	GAGTC	6 cut(s)	287, 326, 470, 590, 1333, 1792
Psp124BI	GAGCTC	1 cut(s)	369
Psp6I	CCWGG	4 cut(s)	173, 471, 973, 1576
PspGI	CCWGG	4 cut(s)	173, 471, 973, 1576
PspN4I	GGNNCC	6 cut(s)	12, 124, 332, 415, 452, 477
PspPI	GGNCC	7 cut(s)	132, 414, 535, 977, 1036, 1195, 1370
PstI	CTGCAG	2 cut(s)	489, 1092
PsuI	RGATCY	1 cut(s)	681
PsyI	GACNNNGTC	3 cut(s)	539, 619, 867
PvuI	CGATCG	1 cut(s)	130
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	3 cut(s)	608, 825, 1171
RsaNI	GTAC	3 cut(s)	607, 824, 1170
RseI	CAYNNNNRTG	3 cut(s)	548, 1269, 1720
Rsr2I	CGGWCCG	1 cut(s)	132
RsrII	CGGWCCG	1 cut(s)	132
SacI	GAGCTC	1 cut(s)	369
SaqAI	TTAA	5 cut(s)	188, 381, 930, 1164, 2056
SatI	GCNGC	9 cut(s)	115, 207, 265, 308, 353, 482, 485, 597, 836
Sau96I	GGNCC	7 cut(s)	132, 414, 535, 977, 1036, 1195, 1370
SchI	GAGTC	6 cut(s)	287, 327, 471, 591, 1334, 1793
ScrFI	CCNGG	6 cut(s)	120, 154, 175, 473, 975, 1578
SduI	GDGCHC	4 cut(s)	348, 369, 555, 1264
SfaNI	GCATC	4 cut(s)	276, 548, 750, 949
SfcI	CTRYAG	2 cut(s)	485, 1088
SfoI	GGCGCC	2 cut(s)	12, 124
SinI	GGWCC	6 cut(s)	132, 414, 535, 977, 1036, 1370
SmiMI	CAYNNNNRTG	3 cut(s)	548, 1269, 1720
SmlI	CTYRAG	2 cut(s)	902, 1199
SmoI	CTYRAG	2 cut(s)	902, 1199
Sse9I	AATT	9 cut(s)	229, 445, 466, 934, 1441, 1581, 1673, 1739, 1977
SspDI	GGCGCC	2 cut(s)	10, 122
SspMI	CTAG	3 cut(s)	1028, 1862, 2018
SstI	GAGCTC	1 cut(s)	369
StyD4I	CCNGG	6 cut(s)	118, 152, 173, 471, 973, 1576
StyI	CCWWGG	4 cut(s)	591, 600, 666, 1972
TaaI	ACNGT	8 cut(s)	103, 136, 409, 528, 730, 1169, 1234, 1901
TaiI	ACGT	2 cut(s)	459, 504
TaqI	TCGA	4 cut(s)	105, 719, 957, 2031
TasI	AATT	9 cut(s)	229, 445, 466, 934, 1441, 1581, 1673, 1739, 1977
TatI	WGTACW	2 cut(s)	606, 823
TauI	GCSGC	5 cut(s)	209, 267, 310, 484, 599
TfiI	GAWTC	6 cut(s)	80, 281, 432, 782, 898, 1835
Tru1I	TTAA	5 cut(s)	188, 381, 930, 1164, 2056
Tru9I	TTAA	5 cut(s)	188, 381, 930, 1164, 2056
TscAI	CASTG	2 cut(s)	631, 1527
TseFI	GTSAC	4 cut(s)	89, 223, 1426, 1666
TseI	GCWGC	4 cut(s)	114, 352, 484, 835
Tsp45I	GTSAC	4 cut(s)	89, 223, 1426, 1666
TspDTI	ATGAA	6 cut(s)	1083, 1273, 1482, 1608, 1704, 1791
TspGWI	ACGGA	2 cut(s)	211, 1579
TspRI	CASTG	2 cut(s)	631, 1527
Tth111I	GACNNNGTC	3 cut(s)	539, 619, 867
VpaK11BI	GGWCC	6 cut(s)	132, 414, 535, 977, 1036, 1370
XapI	RAATTY	3 cut(s)	1441, 1673, 1977
XceI	RCATGY	1 cut(s)	1393
XcmI	CCANNNNNNNNNTGG	1 cut(s)	598
XspI	CTAG	3 cut(s)	1028, 1862, 2018

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.