Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0008054

Physical Location & Seq

Genomic Coordinates Reverse (-)

33074192 .. 33077453

Gene Structure 3262 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1234700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGTTTGCTGTTCAGTCTGAACAGAATAATATTCCCATATTACCCCCGTATATAACTATAAACGAGAAAAATCAGAAGGACAAGAAATTGATAGCGACGCCCCGCCCCCCGCCACCAGAAGCAGAGAGCAGAGAAACAGAGAGACCAGAGAGAGAAGCAAAAATGGGGAAGATAAGCTACAAGAAGCTAACCGGAAGCCAAAACCTAAGACAGCGACTCGTACTGGCGGCGCTTGCGTCCACACCGGTTCTTATCGAGGACATTCGCGCAGAGGAGACATGGCCCGGCCTCCGCCCCCACGAGGTCTCCTTCCTCCGCCTCCTCGAGAAGGTCTCCGATGACTGCGTCGTCGAAATCAACGAGACTGGTACGAAATTGAAGTTCAAGCCGGGGATAGTGATGGGTGGGAGGAATTTGTTGCACGACTGCGGGCTCAGTCGGGCGATTGGGTATTTCTTGGAGCCATTGATTGTGCTTGGTCTCTTTGCCAAAAAGCCGCTTACCATTACGCTTAAAGGAATTACAAATGATCCCAAGGACCCATCTGTTGATACATTCCGGTCCACTACCTTACCCATGTTAAAACACTTTGGAGTTCCCTCAGAAGGGCTAGACCTTAAAATACAGAGTCGTGGATCTGCTCCTCAAGGTGGCGGTGAAGTGTTTTTGTCAATCCCAATTGTTCAAAGTCTAACTGCAGTAAACTGGACTGATGAGGGGATGGTTAAGAGGATTAGAGGGGTTACGTTCTCAACAAGAGTGTCCACACAGTTTGAAAATACCATGGTGTATGCTGCTCGTGGAATCTTTAATCTCTTACTCCCAGATGTTCACATATTTACTGACCATAGAAGTGGCGCACAAGCTGGACTTTCACCTGGTTATGGAATTTCACTGGTTGCGGAAACAACTTCTGGTTGCTGTATCTCTGCTGATACAGCAATTTCTTATTCTCGAGGGGAAGAAACAGTTGAACTTGAAGATGAGGAGAAGAAAGATCTTATGCCTCCAGAGGATGTTGGTGTGAAAATGGCTAATGTTCTGCTTGGGGAGATTGAGCAGGGTGGAGTGGTAGATTCAACACATCAGGGCTTGTTGTTTCTTCTCTGTGCACTATGTCCACAAGATGTTTCAAAGGTTCGTGTTGGAAAGCTCTCTCCTTATGGGATAGAAACACTCAGAAACATCAAAGACTTTCTCGGTGTTAAATTTGTCATTAAGCCCGACCCATCCACAGGGACTGTTATACTTAAATGCGTTGGCTCTGGGTTAAGGAACCTGTCGAGAAGGATCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000469 GO:0000478 GO:0000479 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0022613 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RTC RTC_insert

Protein Analysis

433

Amino Acids

47.28

Weight (kDa)

7.58

Isoelectric Point (pI)

40.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RTC	PF01137	64 - 406	4.4e-59	RNA 3'-terminal phosphate cyclase
RTC_insert	PF05189	237 - 353	2.6e-27	RNA 3'-terminal phosphate cyclase (RTC), insert domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22100
fragaria_vesca	FvH4_3g12140 FvH4_3g12140 FvH4_3g12140 FvH4_3g12140 FvH4_3g12140 FvH4_3g12140
malus_domestica	MD05G1254500.v1.1 MD10G1234700.v1.1
prunus_persica	Prupe.4G110100_v2.0.a1
pyrus_communis	pycom05g23230 pycom10g19650
rosa_chinensis	RchiOBHm_Chr5g0019871
rosa_laevigata	RLG00000032480
rosa_multiflora	Rmu_sc0000344.1_g000019 Rmu_sc0001319.1_g000005
rosa_roxburghii	Rroxscaffold_1G00058300
rosa_rugosa	Rorug05G0054600.1 Rorug05G0054700
rosa_samantha	Rh5AG144800 Rh5BG144000 Rh5CG155700 Rh5DG143700
rosa_wichuraiana	Rw5G012790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	347
AccII	CGCG	1 cut(s)	267
AciI	CCGC	9 cut(s)	103, 110, 227, 292, 316, 429, 497, 654, 902
AclWI	GGATC	3 cut(s)	524, 643, 1298
AcsI	RAATTY	3 cut(s)	412, 888, 1208
AcyI	GRCGYC	1 cut(s)	98
AfaI	GTAC	2 cut(s)	222, 370
AfiI	CCNNNNNNNGG	7 cut(s)	301, 328, 605, 606, 650, 884, 1235
AgeI	ACCGGT	1 cut(s)	244
AgsI	TTSAA	8 cut(s)	379, 385, 686, 776, 974, 980, 1080, 1134
AjnI	CCWGG	1 cut(s)	877
AluBI	AGCT	4 cut(s)	177, 187, 866, 1153
AluI	AGCT	4 cut(s)	177, 187, 866, 1153
Alw21I	GWGCWC	1 cut(s)	1114
Alw26I	GTCTC	6 cut(s)	136, 269, 310, 337, 356, 485
Alw44I	GTGCAC	1 cut(s)	1110
AlwI	GGATC	3 cut(s)	524, 643, 1298
AlwNI	CAGNNNCTG	1 cut(s)	1241
Ama87I	CYCGRG	2 cut(s)	323, 954
AoxI	GGCC	2 cut(s)	281, 286
ApaLI	GTGCAC	1 cut(s)	1110
ApeKI	GCWGC	1 cut(s)	794
ApoI	RAATTY	3 cut(s)	412, 888, 1208
AsiGI	ACCGGT	1 cut(s)	244
AspLEI	GCGC	3 cut(s)	232, 269, 860
AspS9I	GGNCC	3 cut(s)	282, 538, 561
AsuC2I	CCSGG	2 cut(s)	285, 390
AsuHPI	GGTGA	2 cut(s)	668, 867
AvaI	CYCGRG	2 cut(s)	323, 954
AvaII	GGWCC	2 cut(s)	538, 561
BaeGI	GKGCMC	1 cut(s)	1114
BanII	GRGCYC	1 cut(s)	435
BarI	GAAGNNNNNNTAC	2 cut(s)	161, 193
BauI	CACGAG	2 cut(s)	299, 798
Bbv12I	GWGCWC	1 cut(s)	1114
BbvI	GCAGC	1 cut(s)	781
BccI	CCATC	4 cut(s)	394, 550, 715, 1237
BciT130I	CCWGG	1 cut(s)	879
BcnI	CCSGG	2 cut(s)	285, 390
BcoDI	GTCTC	6 cut(s)	136, 269, 310, 337, 356, 485
BfaI	CTAG	1 cut(s)	611
BfmI	CTRYAG	1 cut(s)	696
BfoI	RGCGCY	1 cut(s)	233
BglII	AGATCT	1 cut(s)	997
BisI	GCNGC	3 cut(s)	228, 497, 795
BlsI	GCNGC	3 cut(s)	229, 498, 796
Bme1390I	CCNGG	3 cut(s)	285, 390, 879
Bme18I	GGWCC	2 cut(s)	538, 561
BmeT110I	CYCGRG	2 cut(s)	323, 954
BmgT120I	GGNCC	3 cut(s)	282, 538, 561
BmiI	GGNNCC	3 cut(s)	462, 540, 1277
BmrFI	CCNGG	3 cut(s)	285, 390, 879
BplI	GAGNNNNNCTC	2 cut(s)	317, 349
BpmI	CTGGAG	1 cut(s)	993
BpuEI	CTTGAG	1 cut(s)	630
BpuMI	CCSGG	2 cut(s)	285, 390
BsaHI	GRCGYC	1 cut(s)	98
BsaI	GGTCTC	4 cut(s)	136, 310, 337, 485
BsaJI	CCNNGG	3 cut(s)	389, 534, 783
BsaWI	WCCGGW	3 cut(s)	191, 244, 558
BsaXI	ACNNNNNCTCC	2 cut(s)	290, 320
Bsc4I	CCNNNNNNNGG	7 cut(s)	301, 328, 605, 606, 650, 884, 1235
Bse118I	RCCGGY	1 cut(s)	244
Bse1I	ACTGG	4 cut(s)	228, 370, 710, 900
BseBI	CCWGG	1 cut(s)	879
BseDI	CCNNGG	3 cut(s)	389, 534, 783
BseGI	GGATG	3 cut(s)	726, 1021, 1229
BseLI	CCNNNNNNNGG	7 cut(s)	301, 328, 605, 606, 650, 884, 1235
BseMII	CTCAG	3 cut(s)	448, 615, 1192
BseNI	ACTGG	4 cut(s)	228, 370, 710, 900
BseRI	GAGGAG	4 cut(s)	287, 311, 633, 1001
BseSI	GKGCMC	1 cut(s)	1114
BseXI	GCAGC	1 cut(s)	781
Bsh1236I	CGCG	1 cut(s)	267
BshFI	GGCC	2 cut(s)	283, 288
BshTI	ACCGGT	1 cut(s)	244
BsiHKAI	GWGCWC	1 cut(s)	1114
BsiHKCI	CYCGRG	2 cut(s)	323, 954
BsiSI	CCGG	5 cut(s)	192, 245, 285, 389, 559
BslFI	GGGAC	1 cut(s)	1252
BslI	CCNNNNNNNGG	7 cut(s)	301, 328, 605, 606, 650, 884, 1235
BsmAI	GTCTC	6 cut(s)	136, 269, 310, 337, 356, 485
BsmFI	GGGAC	1 cut(s)	1252
BsnI	GGCC	2 cut(s)	283, 288
Bso31I	GGTCTC	4 cut(s)	136, 310, 337, 485
BsoBI	CYCGRG	2 cut(s)	323, 954
Bsp1286I	GDGCHC	2 cut(s)	435, 1114
Bsp143I	GATC	4 cut(s)	529, 635, 997, 1290
Bsp19I	CCATGG	1 cut(s)	783
BspACI	CCGC	9 cut(s)	103, 110, 227, 292, 316, 429, 497, 654, 902
BspANI	GGCC	2 cut(s)	283, 288
BspCNI	CTCAG	3 cut(s)	447, 614, 1191
BspFNI	CGCG	1 cut(s)	267
BspHI	TCATGA	1 cut(s)	1295
BspLI	GGNNCC	3 cut(s)	462, 540, 1277
BspMAI	CTGCAG	1 cut(s)	700
BspPI	GGATC	3 cut(s)	524, 643, 1298
BspTNI	GGTCTC	4 cut(s)	136, 310, 337, 485
BsrFI	RCCGGY	1 cut(s)	244
BsrI	ACTGG	4 cut(s)	228, 370, 710, 900
BssAI	RCCGGY	1 cut(s)	244
BssECI	CCNNGG	3 cut(s)	389, 534, 783
BssMI	GATC	4 cut(s)	529, 635, 997, 1290
BssNI	GRCGYC	1 cut(s)	98
BssSI	CACGAG	2 cut(s)	299, 798
BssT1I	CCWWGG	2 cut(s)	534, 783
Bst2BI	CACGAG	2 cut(s)	299, 798
Bst2UI	CCWGG	1 cut(s)	879
Bst4CI	ACNGT	3 cut(s)	771, 970, 1243
BstACI	GRCGYC	1 cut(s)	98
BstC8I	GCNNGC	2 cut(s)	234, 431
BstDEI	CTNAG	4 cut(s)	206, 434, 601, 1178
BstDSI	CCRYGG	1 cut(s)	783
BstENI	CCTNNNNNAGG	1 cut(s)	326
BstF5I	GGATG	3 cut(s)	726, 1021, 1229
BstFNI	CGCG	1 cut(s)	267
BstH2I	RGCGCY	1 cut(s)	233
BstHHI	GCGC	3 cut(s)	232, 269, 860
BstKTI	GATC	4 cut(s)	532, 638, 1000, 1293
BstMAI	GTCTC	6 cut(s)	136, 269, 310, 337, 356, 485
BstMBI	GATC	4 cut(s)	529, 635, 997, 1290
BstMWI	GCNNNNNNNGC	2 cut(s)	233, 938
BstNI	CCWGG	1 cut(s)	879
BstSCI	CCNGG	3 cut(s)	283, 388, 877
BstSFI	CTRYAG	1 cut(s)	696
BstSLI	GKGCMC	1 cut(s)	1114
BstUI	CGCG	1 cut(s)	267
BstV1I	GCAGC	1 cut(s)	781
BstX2I	RGATCY	3 cut(s)	635, 997, 1290
BstXI	CCANNNNNNTGG	1 cut(s)	854
BstYI	RGATCY	3 cut(s)	635, 997, 1290
BsuRI	GGCC	2 cut(s)	283, 288
BtgI	CCRYGG	1 cut(s)	783
BtsCI	GGATG	3 cut(s)	726, 1021, 1229
BtsIMutI	CAGTG	1 cut(s)	893
Cac8I	GCNNGC	2 cut(s)	234, 431
CaiI	CAGNNNCTG	1 cut(s)	1241
CciI	TCATGA	1 cut(s)	1295
CfoI	GCGC	3 cut(s)	232, 269, 860
Cfr10I	RCCGGY	1 cut(s)	244
Cfr13I	GGNCC	3 cut(s)	282, 538, 561
CseI	GACGC	3 cut(s)	106, 225, 334
CsiI	ACCWGGT	1 cut(s)	877
Csp6I	GTAC	2 cut(s)	221, 369
CspAI	ACCGGT	1 cut(s)	244
CspCI	CAANNNNNGTGG	2 cut(s)	754, 789
CviAII	CATG	4 cut(s)	279, 577, 784, 1296
CviQI	GTAC	2 cut(s)	221, 369
DdeI	CTNAG	4 cut(s)	206, 434, 601, 1178
DpnI	GATC	4 cut(s)	531, 637, 999, 1292
DpnII	GATC	4 cut(s)	529, 635, 997, 1290
DrdI	GACNNNNNNGTC	1 cut(s)	347
DseDI	GACNNNNNNGTC	1 cut(s)	347
EciI	GGCGGA	2 cut(s)	281, 305
Eco130I	CCWWGG	2 cut(s)	534, 783
Eco24I	GRGCYC	1 cut(s)	435
Eco31I	GGTCTC	4 cut(s)	136, 310, 337, 485
Eco47I	GGWCC	2 cut(s)	538, 561
Eco88I	CYCGRG	2 cut(s)	323, 954
EcoNI	CCTNNNNNAGG	1 cut(s)	326
EcoO109I	RGGNCCY	1 cut(s)	538
EcoRII	CCWGG	1 cut(s)	877
EcoT14I	CCWWGG	2 cut(s)	534, 783
EcoT38I	GRGCYC	1 cut(s)	435
ErhI	CCWWGG	2 cut(s)	534, 783
FaeI	CATG	4 cut(s)	282, 580, 787, 1299
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FaqI	GGGAC	1 cut(s)	1252
FatI	CATG	4 cut(s)	278, 576, 783, 1295
FauI	CCCGC	3 cut(s)	110, 117, 422
Fnu4HI	GCNGC	3 cut(s)	228, 497, 795
FokI	GGATG	3 cut(s)	733, 1028, 1216
FriOI	GRGCYC	1 cut(s)	435
Fsp4HI	GCNGC	3 cut(s)	228, 497, 795
FspBI	CTAG	1 cut(s)	611
GlaI	GCGC	3 cut(s)	231, 268, 859
GluI	GCNGC	3 cut(s)	228, 497, 795
GsuI	CTGGAG	1 cut(s)	993
HaeII	RGCGCY	1 cut(s)	233
HaeIII	GGCC	2 cut(s)	283, 288
HapII	CCGG	5 cut(s)	192, 245, 285, 389, 559
HgaI	GACGC	3 cut(s)	106, 225, 334
HhaI	GCGC	3 cut(s)	232, 269, 860
Hin1I	GRCGYC	1 cut(s)	98
Hin1II	CATG	4 cut(s)	282, 580, 787, 1299
Hin6I	GCGC	3 cut(s)	230, 267, 858
HinP1I	GCGC	3 cut(s)	230, 267, 858
HinfI	GANTC	4 cut(s)	216, 628, 804, 1076
HpaII	CCGG	5 cut(s)	192, 245, 285, 389, 559
HphI	GGTGA	2 cut(s)	668, 867
Hpy166II	GTNNAC	7 cut(s)	240, 564, 703, 765, 832, 1112, 1121
Hpy188I	TCNGA	5 cut(s)	19, 75, 337, 604, 1181
Hpy188III	TCNNGA	5 cut(s)	325, 954, 1010, 1284, 1296
Hpy8I	GTNNAC	7 cut(s)	240, 564, 703, 765, 832, 1112, 1121
Hpy99I	CGWCG	3 cut(s)	100, 350, 353
HpyAV	CCTTC	5 cut(s)	70, 319, 322, 599, 1281
HpyCH4III	ACNGT	3 cut(s)	771, 970, 1243
HpyCH4IV	ACGT	1 cut(s)	746
HpyCH4V	TGCA	3 cut(s)	421, 698, 1112
HpyF10VI	GCNNNNNNNGC	2 cut(s)	233, 938
HpyF3I	CTNAG	4 cut(s)	206, 434, 601, 1178
HpySE526I	ACGT	1 cut(s)	746
Hsp92I	GRCGYC	1 cut(s)	98
Hsp92II	CATG	4 cut(s)	282, 580, 787, 1299
HspAI	GCGC	3 cut(s)	230, 267, 858
Kzo9I	GATC	4 cut(s)	529, 635, 997, 1290
LmnI	GCTCC	2 cut(s)	460, 646
Lsp1109I	GCAGC	1 cut(s)	781
MabI	ACCWGGT	1 cut(s)	877
MaeI	CTAG	1 cut(s)	611
MaeII	ACGT	1 cut(s)	746
MaeIII	GTNAC	1 cut(s)	742
MalI	GATC	4 cut(s)	531, 637, 999, 1292
MboI	GATC	4 cut(s)	529, 635, 997, 1290
MboII	GAAGA	5 cut(s)	181, 974, 992, 1003, 1094
MfeI	CAATTG	1 cut(s)	678
MflI	RGATCY	3 cut(s)	635, 997, 1290
MhlI	GDGCHC	2 cut(s)	435, 1114
MluCI	AATT	8 cut(s)	86, 374, 412, 519, 678, 888, 942, 1208
MlyI	GAGTC	2 cut(s)	210, 637
MmeI	TCCRAC	1 cut(s)	1126
MseI	TTAA	9 cut(s)	513, 581, 618, 726, 810, 1206, 1218, 1251, 1271
MslI	CAYNNNNRTG	1 cut(s)	852
MspI	CCGG	5 cut(s)	192, 245, 285, 389, 559
MspR9I	CCNGG	3 cut(s)	285, 390, 879
MunI	CAATTG	1 cut(s)	678
MvaI	CCWGG	1 cut(s)	879
MvnI	CGCG	1 cut(s)	267
MwoI	GCNNNNNNNGC	2 cut(s)	233, 938
NciI	CCSGG	2 cut(s)	285, 390
NcoI	CCATGG	1 cut(s)	783
NdeII	GATC	4 cut(s)	529, 635, 997, 1290
NlaIII	CATG	4 cut(s)	282, 580, 787, 1299
NlaIV	GGNNCC	3 cut(s)	462, 540, 1277
PaeR7I	CTCGAG	2 cut(s)	323, 954
PagI	TCATGA	1 cut(s)	1295
PcsI	WCGNNNNNNNCGW	1 cut(s)	357
PfeI	GAWTC	2 cut(s)	804, 1076
PflFI	GACNNNGTC	1 cut(s)	344
PinAI	ACCGGT	1 cut(s)	244
PkrI	GCNGC	3 cut(s)	229, 498, 796
PleI	GAGTC	2 cut(s)	210, 636
PpsI	GAGTC	2 cut(s)	210, 636
PpuMI	RGGWCCY	1 cut(s)	538
Psp5II	RGGWCCY	1 cut(s)	538
Psp6I	CCWGG	1 cut(s)	877
PspGI	CCWGG	1 cut(s)	877
PspN4I	GGNNCC	3 cut(s)	462, 540, 1277
PspPI	GGNCC	3 cut(s)	282, 538, 561
PspPPI	RGGWCCY	1 cut(s)	538
PstI	CTGCAG	1 cut(s)	700
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	3 cut(s)	635, 997, 1290
PsyI	GACNNNGTC	1 cut(s)	344
RsaI	GTAC	2 cut(s)	222, 370
RsaNI	GTAC	2 cut(s)	221, 369
RseI	CAYNNNNRTG	1 cut(s)	852
SaqAI	TTAA	9 cut(s)	513, 581, 618, 726, 810, 1206, 1218, 1251, 1271
SatI	GCNGC	3 cut(s)	228, 497, 795
Sau3AI	GATC	4 cut(s)	529, 635, 997, 1290
Sau96I	GGNCC	3 cut(s)	282, 538, 561
SchI	GAGTC	2 cut(s)	210, 637
ScrFI	CCNGG	3 cut(s)	285, 390, 879
SduI	GDGCHC	2 cut(s)	435, 1114
SexAI	ACCWGGT	1 cut(s)	877
SfcI	CTRYAG	1 cut(s)	696
Sfr274I	CTCGAG	2 cut(s)	323, 954
SinI	GGWCC	2 cut(s)	538, 561
SlaI	CTCGAG	2 cut(s)	323, 954
SmiMI	CAYNNNNRTG	1 cut(s)	852
SmlI	CTYRAG	3 cut(s)	323, 645, 954
SmoI	CTYRAG	3 cut(s)	323, 645, 954
Sse9I	AATT	8 cut(s)	86, 374, 412, 519, 678, 888, 942, 1208
SsiI	CCGC	9 cut(s)	103, 110, 227, 292, 316, 429, 497, 654, 902
SspI	AATATT	1 cut(s)	31
SspMI	CTAG	1 cut(s)	611
StyD4I	CCNGG	3 cut(s)	283, 388, 877
StyI	CCWWGG	2 cut(s)	534, 783
TaaI	ACNGT	3 cut(s)	771, 970, 1243
TaiI	ACGT	1 cut(s)	749
TaqI	TCGA	5 cut(s)	255, 324, 351, 955, 1283
TasI	AATT	8 cut(s)	86, 374, 412, 519, 678, 888, 942, 1208
TauI	GCSGC	2 cut(s)	230, 499
TfiI	GAWTC	2 cut(s)	804, 1076
Tru1I	TTAA	9 cut(s)	513, 581, 618, 726, 810, 1206, 1218, 1251, 1271
Tru9I	TTAA	9 cut(s)	513, 581, 618, 726, 810, 1206, 1218, 1251, 1271
TscAI	CASTG	1 cut(s)	900
TseI	GCWGC	1 cut(s)	794
TspRI	CASTG	1 cut(s)	900
Tth111I	GACNNNGTC	1 cut(s)	344
VneI	GTGCAC	1 cut(s)	1110
VpaK11BI	GGWCC	2 cut(s)	538, 561
XagI	CCTNNNNNAGG	1 cut(s)	326
XapI	RAATTY	3 cut(s)	412, 888, 1208
XhoI	CTCGAG	2 cut(s)	323, 954
XspI	CTAG	1 cut(s)	611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.