MD11G1008300.v1.1

calmodulin-binding family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0012935
Physical Location & Seq
Reverse (-)
712375 .. 715535
3161 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1008300.v1.1.491

Sequence Viewer

Length: 2016 bp
ATGGGAATTTCCTTTTCTTGCCCATTTTCGCAGTACAGTGATTTGGAAAGTGGGTTGGATTCGATCATTGTGAAGTCCATAAGCTTTGGAGACAATGAAGTTAAAACTCCGGTCAGATCAGTTAGTTTCAATGGTGGTGATGCAGAACCCACAATAATGAAATCCTTAGGTTCCGGAAGGATGACACTTGAAACTTCTGTTAGCTTTAAAGGTAGAGAGTTGGAGAAAATGATGTTGCTCAAGGTTCCTTCGTTAGAAAAGAGCATGACCGTTGCATCAGTCAGCCCTCTCAGCAAAGAAATGAACGTTCCCTCCCCAAGATCAGATAGTCCTCTGGGAATGATCAGGCCCTTGCAACTTTTGGATCCCACCAGCCCCAAACACATGGCAGCAATTAAGTTGCAGAAAGTATACAAAAGTTTCCGAACCAGACGAAAGCTAGCAGATTGTGCAGTTCTTGTTGAACAGAGCTGGTGGAAGCTGTTAGATTTCGCTGAGCTCAAGCGGAGTTCTATATCATTCTTTGAAATTGAGAAACATGAAACTGCCATGTCGCGTTGGTCTAGAGCAAGGACCAGAGCCGCCAAGGTTGGAAAAGGTCTATCAAAGAATGAAAAGGCACAAAAGCTTGCCTTGCAGCATTGGCTCGAGGCGATTGATCCAAGGCATCGGTATGGACATAACCTACACTTTTACTACGTTGAATGGCTTCACTGTCAGAGTAGAGAACCGTTCTTCTACTGGCTAGACATAGGAGAAGGGAAGGAAGTAAATCTTGTTGAAAAATGCGCTCGATCGAAACTTCAACAGCAGTGTATCAAGTACCTTGGACCGATGGAAAGAATGGCCTATGAAGTTGTTGTGGAGGATGGAAAATTCTTCTACAAACAATCAGGGGAGCTTCTCCATACAACCGGAGAATCCGATGATACCAAATGGATTTTCGTTCTTAGTGCTTCTAGAACCTTATACGTTGGCAAGAAAAAGAAGGGGACGTTTCAACATTCAAGTTTTTTGGCTGGAGGAGCCACATCTGCTGCCGGGAGATTAGTTGTTGAAAACGGCATCCTTAAGGCAGTTTGGCCTCACAGTGGTCACTATCGGCCTACAGAAGAAAATTTCAGAGACTTCGTCTCATTCCTTCAAGAGAACAATGTCGATCTCAAAGATGTTAAGTTAAGTCCGGTTGATGAGGTAGAGGAGGGTTCACTTAGCAAGAAAAGAAGCAGTGCTCATATTAGATGCAACTCATCTGAAGAGGGCTTGATCCCAAATGTATGTGATTTAAAGGCTGAAGAGACCATTGAAGAAGACTTGATTCCGGAGGAGAATGATTCAATAGAACAAGCTGCTGCAGTCGAATCTCATATGTCAAGCCGTCTCCGCTGTGTTAGCAGAAAATTGTCTAATCTTGCAATACCAAACAGGGAAAGGTATTTCGAGAAGGTAGAGAGCGCAACTGAACCCGCTGGTTCAAGTTGCAGCGGTATTCCAGTGGAAACTCCAGTTGATGGTTATGAAACGGTGGATGAAACTCTCCCATCAGAGCAGGATTACATGGTTTCGAAGAAGAACTTGTTCGACGAAAACAATGATGAGACCGAGGGAGAAGCCATTCCTCAAGAATCAATTCTCAAAAGGATTAACTCACACAAAGGAATGAAATCATTCCAACTGGGAAGGCAGTTGTCTTGCAAATGGACAACGGGAGCTGGACCTCGCATTGGCTGTGTGAGGGACTATCCCTCGGAGCTCCAGTTCCGAGCTTTGGAGCATGTGAACTTGTCTCCAAGAAGTGCTGCCCATTCGAGGTCATACTTCTCTCCTCGGACCACCAGAGCGCTGAGTCCAAGGGTGTTGACACCGGCAAAATGTGGCGGGGAGATGGAAGCACGCATAAGCTCCCCAGCACTTGAAAGAGTGAAGCTTTCTGTAAAAAGCATTAACCTTTCTAGAACTCGGTCATCCCAACTATCTACAGGAAGTACAGCAACCGCCATTGCTAATGTCTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

672

Amino Acids

75.14

Weight (kDa)

8.52

Isoelectric Point (pI)

52.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012935)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13600 AT3G13600
fragaria_vesca FvH4_3g45350
malus_domestica MD03G1005600.v1.1 MD11G1008300.v1.1
prunus_persica Prupe.6G005400_v2.0.a1
pyrus_communis pycom03g00580
rosa_chinensis RchiOBHm_Chr5g0083171
rosa_laevigata RLG00000037015
rosa_multiflora Rmu_sc0030211.1_g000001
rosa_roxburghii Rroxscaffold_1G00001350
rosa_rugosa Rorug05G0482700 Rorug05G0482800
rosa_samantha Rh5AG532400 Rh5BG559600 Rh5CG582400 Rh5DG568300
rosa_wichuraiana Rw5G050060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1511
AccI GTMKAC 1 cut(s) 411
AccII CGCG 1 cut(s) 556
AccIII TCCGGA 2 cut(s) 173, 1321
AciI CCGC 7 cut(s) 505, 582, 1384, 1467, 1485, 1878, 1995
AclI AACGTT 1 cut(s) 306
AclWI GGATC 4 cut(s) 359, 372, 653, 1261
AcsI RAATTY 3 cut(s) 6, 875, 1117
AcuI CTGAAG 2 cut(s) 1275, 1314
AfaI GTAC 3 cut(s) 35, 824, 1987
AfeI AGCGCT 1 cut(s) 1842
AfiI CCNNNNNNNGG 5 cut(s) 1091, 1511, 1724, 1768, 1809
AflII CTTAAG 1 cut(s) 1070
AjuI GAANNNNNNNTTGG 2 cut(s) 926, 958
AloI GAACNNNNNNTCC 4 cut(s) 296, 328, 1742, 1774
Alw21I GWGCWC 3 cut(s) 501, 1234, 1755
Alw26I GTCTC 7 cut(s) 84, 1119, 1138, 1292, 1385, 1592, 1791
AlwI GGATC 4 cut(s) 359, 372, 653, 1261
Ama87I CYCGRG 1 cut(s) 647
Aor13HI TCCGGA 2 cut(s) 173, 1321
Aor51HI AGCGCT 1 cut(s) 1842
AoxI GGCC 4 cut(s) 347, 846, 1082, 1103
ApeKI GCWGC 7 cut(s) 389, 637, 1037, 1349, 1352, 1482, 1799
ApoI RAATTY 3 cut(s) 6, 875, 1117
Asp700I GAANNNNTTC 5 cut(s) 708, 1577, 1614, 1629, 1667
AspLEI GCGC 3 cut(s) 791, 1457, 1843
AspS9I GGNCC 5 cut(s) 348, 573, 830, 1715, 1830
AsuC2I CCSGG 1 cut(s) 1042
AsuHPI GGTGA 1 cut(s) 149
AsuII TTCGAA 1 cut(s) 1565
AsuNHI GCTAGC 1 cut(s) 439
AvaI CYCGRG 1 cut(s) 647
AvaII GGWCC 4 cut(s) 573, 830, 1715, 1830
AxyI CCTNAGG 1 cut(s) 166
BamHI GGATCC 1 cut(s) 364
BanII GRGCYC 2 cut(s) 501, 1755
BauI CACGAG 1 cut(s) 2011
BbsI GAAGAC 1 cut(s) 1317
Bbv12I GWGCWC 3 cut(s) 501, 1234, 1755
BbvI GCAGC 7 cut(s) 401, 649, 1024, 1336, 1339, 1494, 1786
BccI CCATC 5 cut(s) 829, 863, 1505, 1549, 1879
BceAI ACGGC 2 cut(s) 1078, 1362
BclI TGATCA 1 cut(s) 342
BcnI CCSGG 1 cut(s) 1042
BcoDI GTCTC 7 cut(s) 84, 1119, 1138, 1292, 1385, 1592, 1791
BfaI CTAG 5 cut(s) 440, 564, 746, 960, 1953
BfmI CTRYAG 3 cut(s) 1107, 1353, 1977
BfoI RGCGCY 1 cut(s) 1844
BfrI CTTAAG 1 cut(s) 1070
BisI GCNGC 8 cut(s) 390, 582, 638, 1038, 1350, 1353, 1483, 1800
BlpI GCTNAGC 1 cut(s) 495
BlsI GCNGC 8 cut(s) 391, 583, 639, 1039, 1351, 1354, 1484, 1801
Bme1390I CCNGG 1 cut(s) 1042
Bme18I GGWCC 4 cut(s) 573, 830, 1715, 1830
BmeT110I CYCGRG 1 cut(s) 647
BmgT120I GGNCC 5 cut(s) 348, 573, 830, 1715, 1830
BmiI GGNNCC 4 cut(s) 172, 246, 366, 1027
BmrFI CCNGG 1 cut(s) 1042
BmrI ACTGGG 1 cut(s) 1685
BmsI GCATC 5 cut(s) 130, 284, 676, 1074, 1232
BmtI GCTAGC 1 cut(s) 443
BmuI ACTGGG 1 cut(s) 1685
BpiI GAAGAC 1 cut(s) 1317
BpmI CTGGAG 3 cut(s) 1041, 1488, 1739
Bpu1102I GCTNAGC 1 cut(s) 495
Bpu14I TTCGAA 1 cut(s) 1565
BpuEI CTTGAG 3 cut(s) 224, 485, 1605
BpuMI CCSGG 1 cut(s) 1042
BsaI GGTCTC 2 cut(s) 1292, 1592
BsaJI CCNNGG 7 cut(s) 585, 662, 826, 1602, 1746, 1826, 1850
BsaWI WCCGGW 5 cut(s) 109, 173, 914, 1183, 1321
BsaXI ACNNNNNCTCC 4 cut(s) 296, 326, 1742, 1772
Bsc4I CCNNNNNNNGG 5 cut(s) 1091, 1511, 1724, 1768, 1809
Bse118I RCCGGY 1 cut(s) 1864
Bse1I ACTGG 5 cut(s) 746, 1493, 1505, 1680, 1756
Bse21I CCTNAGG 1 cut(s) 166
Bse3DI GCAATG 1 cut(s) 1998
BseAI TCCGGA 2 cut(s) 173, 1321
BseDI CCNNGG 7 cut(s) 585, 662, 826, 1602, 1746, 1826, 1850
BseGI GGATG 5 cut(s) 186, 874, 1065, 1534, 1964
BseLI CCNNNNNNNGG 5 cut(s) 1091, 1511, 1724, 1768, 1809
BseMI GCAATG 1 cut(s) 1998
BseMII CTCAG 3 cut(s) 304, 486, 1835
BseNI ACTGG 5 cut(s) 746, 1493, 1505, 1680, 1756
BseRI GAGGAG 4 cut(s) 1038, 1214, 1340, 1815
BseXI GCAGC 7 cut(s) 401, 649, 1024, 1336, 1339, 1494, 1786
BseYI CCCAGC 1 cut(s) 1906
BsgI GTGCAG 1 cut(s) 471
Bsh1236I CGCG 1 cut(s) 556
Bsh1285I CGRYCG 1 cut(s) 797
BshFI GGCC 4 cut(s) 349, 848, 1084, 1105
BsiEI CGRYCG 1 cut(s) 797
BsiHKAI GWGCWC 3 cut(s) 501, 1234, 1755
BsiHKCI CYCGRG 1 cut(s) 647
BsiSI CCGG 7 cut(s) 110, 174, 915, 1041, 1184, 1322, 1865
BslFI GGGAC 2 cut(s) 1006, 1751
BslI CCNNNNNNNGG 5 cut(s) 1091, 1511, 1724, 1768, 1809
BsmAI GTCTC 7 cut(s) 84, 1119, 1138, 1292, 1385, 1592, 1791
BsmBI CGTCTC 2 cut(s) 1138, 1385
BsmFI GGGAC 2 cut(s) 1006, 1751
BsnI GGCC 4 cut(s) 349, 848, 1084, 1105
Bso31I GGTCTC 2 cut(s) 1292, 1592
BsoBI CYCGRG 1 cut(s) 647
Bsp119I TTCGAA 1 cut(s) 1565
Bsp1286I GDGCHC 3 cut(s) 501, 1234, 1755
Bsp13I TCCGGA 2 cut(s) 173, 1321
Bsp143I GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
Bsp1720I GCTNAGC 1 cut(s) 495
BspACI CCGC 7 cut(s) 505, 582, 1384, 1467, 1485, 1878, 1995
BspANI GGCC 4 cut(s) 349, 848, 1084, 1105
BspCNI CTCAG 3 cut(s) 303, 487, 1836
BspEI TCCGGA 2 cut(s) 173, 1321
BspFNI CGCG 1 cut(s) 556
BspLI GGNNCC 4 cut(s) 172, 246, 366, 1027
BspMAI CTGCAG 1 cut(s) 1357
BspOI GCTAGC 1 cut(s) 443
BspPI GGATC 4 cut(s) 359, 372, 653, 1261
BspT104I TTCGAA 1 cut(s) 1565
BspTI CTTAAG 1 cut(s) 1070
BspTNI GGTCTC 2 cut(s) 1292, 1592
BsrDI GCAATG 1 cut(s) 1998
BsrFI RCCGGY 1 cut(s) 1864
BsrI ACTGG 5 cut(s) 746, 1493, 1505, 1680, 1756
BssAI RCCGGY 1 cut(s) 1864
BssECI CCNNGG 7 cut(s) 585, 662, 826, 1602, 1746, 1826, 1850
BssMI GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
BssNAI GTATAC 1 cut(s) 412
BssSI CACGAG 1 cut(s) 2011
BssT1I CCWWGG 4 cut(s) 585, 662, 826, 1850
Bst1107I GTATAC 1 cut(s) 412
Bst2BI CACGAG 1 cut(s) 2011
Bst4CI ACNGT 6 cut(s) 38, 271, 716, 732, 1091, 1525
Bst6I CTCTTC 2 cut(s) 1251, 1290
BstAFI CTTAAG 1 cut(s) 1070
BstAPI GCANNNNNTGC 1 cut(s) 449
BstBI TTCGAA 1 cut(s) 1565
BstC8I GCNNGC 3 cut(s) 441, 630, 1894
BstDEI CTNAG 6 cut(s) 166, 290, 495, 950, 1211, 1844
BstF5I GGATG 5 cut(s) 186, 874, 1065, 1534, 1964
BstFNI CGCG 1 cut(s) 556
BstH2I RGCGCY 1 cut(s) 1844
BstHHI GCGC 3 cut(s) 791, 1457, 1843
BstKTI GATC 9 cut(s) 66, 119, 323, 345, 367, 661, 797, 1162, 1269
BstMAI GTCTC 7 cut(s) 84, 1119, 1138, 1292, 1385, 1592, 1791
BstMBI GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
BstMCI CGRYCG 1 cut(s) 797
BstMWI GCNNNNNNNGC 8 cut(s) 291, 449, 634, 643, 1025, 1034, 1383, 1392
BstNSI RCATGY 1 cut(s) 1778
BstSCI CCNGG 1 cut(s) 1040
BstSFI CTRYAG 3 cut(s) 1107, 1353, 1977
BstUI CGCG 1 cut(s) 556
BstV1I GCAGC 7 cut(s) 401, 649, 1024, 1336, 1339, 1494, 1786
BstV2I GAAGAC 1 cut(s) 1317
BstX2I RGATCY 1 cut(s) 364
BstXI CCANNNNNNTGG 1 cut(s) 385
BstYI RGATCY 1 cut(s) 364
BstZ17I GTATAC 1 cut(s) 412
Bsu36I CCTNAGG 1 cut(s) 166
BsuRI GGCC 4 cut(s) 349, 848, 1084, 1105
BtsCI GGATG 5 cut(s) 186, 874, 1065, 1534, 1964
BtsI GCAGTG 2 cut(s) 818, 1234
BtsIMutI CAGTG 6 cut(s) 43, 712, 818, 1096, 1234, 1500
Cac8I GCNNGC 3 cut(s) 441, 630, 1894
CfoI GCGC 3 cut(s) 791, 1457, 1843
Cfr10I RCCGGY 1 cut(s) 1864
Cfr13I GGNCC 5 cut(s) 348, 573, 830, 1715, 1830
Csp6I GTAC 3 cut(s) 34, 823, 1986
CviAII CATG 6 cut(s) 265, 385, 539, 550, 1558, 1775
CviQI GTAC 3 cut(s) 34, 823, 1986
DdeI CTNAG 6 cut(s) 166, 290, 495, 950, 1211, 1844
DpnI GATC 9 cut(s) 65, 118, 322, 344, 366, 660, 796, 1161, 1268
DpnII GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
DraI TTTAAA 2 cut(s) 208, 1287
Eam1104I CTCTTC 2 cut(s) 1251, 1290
EarI CTCTTC 2 cut(s) 1251, 1290
Ecl136II GAGCTC 2 cut(s) 499, 1753
Eco130I CCWWGG 4 cut(s) 585, 662, 826, 1850
Eco24I GRGCYC 2 cut(s) 501, 1755
Eco31I GGTCTC 2 cut(s) 1292, 1592
Eco47I GGWCC 4 cut(s) 573, 830, 1715, 1830
Eco47III AGCGCT 1 cut(s) 1842
Eco53kI GAGCTC 2 cut(s) 499, 1753
Eco57I CTGAAG 2 cut(s) 1275, 1314
Eco81I CCTNAGG 1 cut(s) 166
Eco88I CYCGRG 1 cut(s) 647
EcoICRI GAGCTC 2 cut(s) 499, 1753
EcoO109I RGGNCCY 1 cut(s) 348
EcoT14I CCWWGG 4 cut(s) 585, 662, 826, 1850
EcoT38I GRGCYC 2 cut(s) 501, 1755
ErhI CCWWGG 4 cut(s) 585, 662, 826, 1850
Esp3I CGTCTC 2 cut(s) 1138, 1385
FaeI CATG 6 cut(s) 268, 388, 542, 553, 1561, 1778
FalI AAGNNNNNCTT 6 cut(s) 617, 649, 759, 791, 1559, 1591
FaqI GGGAC 2 cut(s) 1006, 1751
FatI CATG 6 cut(s) 264, 384, 538, 549, 1557, 1774
FauI CCCGC 2 cut(s) 1474, 1871
FauNDI CATATG 1 cut(s) 1368
FbaI TGATCA 1 cut(s) 342
FblI GTMKAC 1 cut(s) 411
Fnu4HI GCNGC 8 cut(s) 390, 582, 638, 1038, 1350, 1353, 1483, 1800
FokI GGATG 5 cut(s) 193, 881, 1052, 1541, 1951
FriOI GRGCYC 2 cut(s) 501, 1755
Fsp4HI GCNGC 8 cut(s) 390, 582, 638, 1038, 1350, 1353, 1483, 1800
FspBI CTAG 5 cut(s) 440, 564, 746, 960, 1953
GlaI GCGC 3 cut(s) 790, 1456, 1842
GluI GCNGC 8 cut(s) 390, 582, 638, 1038, 1350, 1353, 1483, 1800
GsaI CCCAGC 1 cut(s) 1910
GsuI CTGGAG 3 cut(s) 1041, 1488, 1739
HaeII RGCGCY 1 cut(s) 1844
HaeIII GGCC 4 cut(s) 349, 848, 1084, 1105
HapII CCGG 7 cut(s) 110, 174, 915, 1041, 1184, 1322, 1865
HhaI GCGC 3 cut(s) 791, 1457, 1843
Hin1II CATG 6 cut(s) 268, 388, 542, 553, 1561, 1778
Hin6I GCGC 3 cut(s) 789, 1455, 1841
HinP1I GCGC 3 cut(s) 789, 1455, 1841
HincII GTYRAC 1 cut(s) 1860
HindII GTYRAC 1 cut(s) 1860
HindIII AAGCTT 3 cut(s) 82, 626, 1925
HinfI GANTC 7 cut(s) 59, 920, 1318, 1334, 1361, 1625, 1846
HpaII CCGG 7 cut(s) 110, 174, 915, 1041, 1184, 1322, 1865
HphI GGTGA 1 cut(s) 149
Hpy166II GTNNAC 4 cut(s) 412, 1208, 1780, 1860
Hpy188III TCNNGA 9 cut(s) 174, 564, 960, 1145, 1322, 1441, 1622, 1953, 2013
Hpy8I GTNNAC 4 cut(s) 412, 1208, 1780, 1860
Hpy99I CGWCG 1 cut(s) 1586
HpyAV CCTTC 8 cut(s) 171, 258, 752, 757, 982, 1151, 1438, 1674
HpyCH4III ACNGT 6 cut(s) 38, 271, 716, 732, 1091, 1525
HpyCH4IV ACGT 4 cut(s) 306, 699, 972, 995
HpyF10VI GCNNNNNNNGC 8 cut(s) 291, 449, 634, 643, 1025, 1034, 1383, 1392
HpyF3I CTNAG 6 cut(s) 166, 290, 495, 950, 1211, 1844
HpySE526I ACGT 4 cut(s) 306, 699, 972, 995
Hsp92II CATG 6 cut(s) 268, 388, 542, 553, 1561, 1778
HspAI GCGC 3 cut(s) 789, 1455, 1841
Kpn2I TCCGGA 2 cut(s) 173, 1321
Ksp22I TGATCA 1 cut(s) 342
Kzo9I GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
LmnI GCTCC 7 cut(s) 898, 1025, 1709, 1750, 1758, 1771, 1907
Lsp1109I GCAGC 7 cut(s) 401, 649, 1024, 1336, 1339, 1494, 1786
LweI GCATC 5 cut(s) 130, 284, 676, 1074, 1232
MaeI CTAG 5 cut(s) 440, 564, 746, 960, 1953
MaeII ACGT 4 cut(s) 306, 699, 972, 995
MaeIII GTNAC 1 cut(s) 1094
MalI GATC 9 cut(s) 65, 118, 322, 344, 366, 660, 796, 1161, 1268
MboI GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
MboII GAAGA 9 cut(s) 727, 871, 1124, 1268, 1307, 1319, 1322, 1579, 1582
MflI RGATCY 1 cut(s) 364
MhlI GDGCHC 3 cut(s) 501, 1234, 1755
MluCI AATT 7 cut(s) 6, 393, 528, 875, 1117, 1400, 1629
MlyI GAGTC 1 cut(s) 1855
MmeI TCCRAC 4 cut(s) 36, 201, 571, 1696
MroI TCCGGA 2 cut(s) 173, 1321
MroXI GAANNNNTTC 5 cut(s) 708, 1577, 1614, 1629, 1667
MseI TTAA 9 cut(s) 102, 207, 396, 1071, 1173, 1178, 1286, 1644, 1944
MslI CAYNNNNRTG 2 cut(s) 155, 672
MspA1I CMGCKG 3 cut(s) 1386, 1469, 1485
MspCI CTTAAG 1 cut(s) 1070
MspI CCGG 7 cut(s) 110, 174, 915, 1041, 1184, 1322, 1865
MspR9I CCNGG 1 cut(s) 1042
MvnI CGCG 1 cut(s) 556
MwoI GCNNNNNNNGC 8 cut(s) 291, 449, 634, 643, 1025, 1034, 1383, 1392
NciI CCSGG 1 cut(s) 1042
NdeI CATATG 1 cut(s) 1368
NdeII GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
NheI GCTAGC 1 cut(s) 439
NlaIII CATG 6 cut(s) 268, 388, 542, 553, 1561, 1778
NlaIV GGNNCC 4 cut(s) 172, 246, 366, 1027
NmuCI GTSAC 1 cut(s) 1094
NspI RCATGY 1 cut(s) 1778
NspV TTCGAA 1 cut(s) 1565
PaeR7I CTCGAG 1 cut(s) 647
PdmI GAANNNNTTC 5 cut(s) 708, 1577, 1614, 1629, 1667
PfeI GAWTC 6 cut(s) 59, 920, 1318, 1334, 1361, 1625
PflFI GACNNNGTC 1 cut(s) 1130
PflMI CCANNNNNTGG 1 cut(s) 1511
PkrI GCNGC 8 cut(s) 391, 583, 639, 1039, 1351, 1354, 1484, 1801
Ple19I CGATCG 1 cut(s) 797
PleI GAGTC 1 cut(s) 1854
PpsI GAGTC 1 cut(s) 1854
Psp124BI GAGCTC 2 cut(s) 501, 1755
Psp1406I AACGTT 1 cut(s) 306
PspFI CCCAGC 1 cut(s) 1906
PspN4I GGNNCC 4 cut(s) 172, 246, 366, 1027
PspPI GGNCC 5 cut(s) 348, 573, 830, 1715, 1830
PspXI VCTCGAGB 1 cut(s) 647
PstI CTGCAG 1 cut(s) 1357
PsuI RGATCY 1 cut(s) 364
PsyI GACNNNGTC 1 cut(s) 1130
PvuI CGATCG 1 cut(s) 797
RsaI GTAC 3 cut(s) 35, 824, 1987
RsaNI GTAC 3 cut(s) 34, 823, 1986
RseI CAYNNNNRTG 2 cut(s) 155, 672
SacI GAGCTC 2 cut(s) 501, 1755
SaqAI TTAA 9 cut(s) 102, 207, 396, 1071, 1173, 1178, 1286, 1644, 1944
SatI GCNGC 8 cut(s) 390, 582, 638, 1038, 1350, 1353, 1483, 1800
Sau3AI GATC 9 cut(s) 63, 116, 320, 342, 364, 658, 794, 1159, 1266
Sau96I GGNCC 5 cut(s) 348, 573, 830, 1715, 1830
SchI GAGTC 1 cut(s) 1855
ScrFI CCNGG 1 cut(s) 1042
SduI GDGCHC 3 cut(s) 501, 1234, 1755
SfaNI GCATC 5 cut(s) 130, 284, 676, 1074, 1232
SfcI CTRYAG 3 cut(s) 1107, 1353, 1977
Sfr274I CTCGAG 1 cut(s) 647
SfuI TTCGAA 1 cut(s) 1565
SinI GGWCC 4 cut(s) 573, 830, 1715, 1830
SlaI CTCGAG 1 cut(s) 647
SmiMI CAYNNNNRTG 2 cut(s) 155, 672
SmlI CTYRAG 5 cut(s) 239, 500, 647, 1070, 1620
SmoI CTYRAG 5 cut(s) 239, 500, 647, 1070, 1620
Sse9I AATT 7 cut(s) 6, 393, 528, 875, 1117, 1400, 1629
SsiI CCGC 7 cut(s) 505, 582, 1384, 1467, 1485, 1878, 1995
SspMI CTAG 5 cut(s) 440, 564, 746, 960, 1953
SstI GAGCTC 2 cut(s) 501, 1755
StyD4I CCNGG 1 cut(s) 1040
StyI CCWWGG 4 cut(s) 585, 662, 826, 1850
TaaI ACNGT 6 cut(s) 38, 271, 716, 732, 1091, 1525
TaiI ACGT 4 cut(s) 309, 702, 975, 998
TaqII GACCGA 3 cut(s) 847, 1616, 1950
TasI AATT 7 cut(s) 6, 393, 528, 875, 1117, 1400, 1629
TatI WGTACW 2 cut(s) 33, 1985
TauI GCSGC 1 cut(s) 584
TfiI GAWTC 6 cut(s) 59, 920, 1318, 1334, 1361, 1625
Tru1I TTAA 9 cut(s) 102, 207, 396, 1071, 1173, 1178, 1286, 1644, 1944
Tru9I TTAA 9 cut(s) 102, 207, 396, 1071, 1173, 1178, 1286, 1644, 1944
TscAI CASTG 6 cut(s) 43, 719, 818, 1096, 1234, 1500
TseFI GTSAC 1 cut(s) 1094
TseI GCWGC 7 cut(s) 389, 637, 1037, 1349, 1352, 1482, 1799
Tsp45I GTSAC 1 cut(s) 1094
TspDTI ATGAA 9 cut(s) 111, 173, 317, 555, 627, 867, 1533, 1545, 1676
TspRI CASTG 6 cut(s) 43, 719, 818, 1096, 1234, 1500
Tth111I GACNNNGTC 1 cut(s) 1130
Van91I CCANNNNNTGG 1 cut(s) 1511
Vha464I CTTAAG 1 cut(s) 1070
VpaK11BI GGWCC 4 cut(s) 573, 830, 1715, 1830
XapI RAATTY 3 cut(s) 6, 875, 1117
XbaI TCTAGA 3 cut(s) 563, 959, 1952
XceI RCATGY 1 cut(s) 1778
XhoI CTCGAG 1 cut(s) 647
XmiI GTMKAC 1 cut(s) 411
XmnI GAANNNNTTC 5 cut(s) 708, 1577, 1614, 1629, 1667
XspI CTAG 5 cut(s) 440, 564, 746, 960, 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.