MD11G1296100.v1.1

Ankyrin repeat domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0015548
Physical Location & Seq
Forward (+)
41397870 .. 41399381
1512 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1296100.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGGACAGGCTGGTGAAGCCAGACGTGAAGGAAGTGGAGCTCAACTTCAAGCGAGACCAAAAGTGCAGCGCAACCTTCCGGCTTAGCAACCTCATGCACACCATGTCCGTCGCCGTCTCTCTCACCACCACCAACCCATCTCTCTTTTCCTTCACTCACCCCCTCTCCATAATCCCGCCGCTCTCTTCCTCCTCCTACACCCTCCTCCTCTCTCAGCCGTCCGATCAGCCCCCGCTTTCCCTCACCGCCAACCCTCATGACGTCATCAACGTCGAGGCCTCCATGCTCCCCACAGGGAAAGCCGACCAGGAGGATCTCCGCCGCCTGTTCCGCCGGTCCGGGCCTCACGTTTTCCGGGACGCTACTATACCCATCTCGTTTGTGGGTCCGCACGTGGTTGAATTTCTGATTTCTCAGCTCACCCGGATCTCGGAATTCGATTCGTTTTTTAACAAGGCGATTTCTGGGTGCTCTGGGGCTGAGCTCACGGCGCTGCTCGGTCCCGCCATAGCTTCCGGGAATGCTAATTTGGTCTCCGACCTGATTGACGCCGGTGCGGTTGTAAATCAGAGAGATTCGGATTCCGGGTCTTTGCTATCTCTCGGTGTTCGGTCCGGAAACATTGATATTGTGAAGGTTCTGATCGCCTCCAGCTGTGAAATTGGTAATTCAGCAGACGAGGTCTTGCACGACGCGGCGGCGATGAACCGGGTCGATTTGTTTGAGATTTTGTACAAGACTATCGGTGGAATTGACGTGAATTTGGTTGACAAGGAAGGTCGAACTCCGATTCATATCGCGGCCGCGCACGGCCATGTCGAGATGTTGAAGTTTTGTATTTCTATCGGAGGCAATGCGGAGGTTACGGACTGTAGAGGTTGGAGTCCGCTTCACTGGGCGGCGGAGAAGGGGCATTTGGGGGCCGCAAAGTGTTTGTTAAATTGCTCCAATGTGAAATACGCCGTCACCAAAGACGGAAGGACGGCTTTCGATCTCGCCGCCGCGAACGGGCACACGAGACTGCTGGGTTTCCTGCGATACGACGACGTCCTGAACCGGGCGGCAAGGTTGGACGACGCTCACGGGATAAAGAGTTGCCTTGCGGAGGGGGCAGAGGTGAACGGGAGGGACCAGAATGGCTGGACCCCTTTGCACAGGGCGGCGTTCAAAGGGAGGATCGAGTGTGTGAAGGTGTTGCTTAATCATGGTGCTCTGGTGGATGCCGTGGACGATGCCAGCTACACGCCGCTGCACTGCGCGGCGGAGGCGGGGCACGTGGAGGTGGCTCTGTTGCTGGTTGCTCATGGAGCTCGGGCCAATGTGAAGAGCTTGGAGGGAATTGTTCCCACCAATTTGGACCGTTTCAACTTCAAGAACCACCCTGCTCTTTTCAACCCTTGCGTCATGAAAAAGAGCGAGTTTAGCCGGGAAATAAACGCCTATCACGGAGCTAAACCTACGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_4

Protein Analysis

489

Amino Acids

52.61

Weight (kDa)

6.37

Isoelectric Point (pI)

24.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 169 - 257 2.5e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 229 - 315 4.2e-17 Ankyrin repeats (3 copies)
Ank_4 PF13637 229 - 278 3.9e-12 Ankyrin repeats (many copies)
Ank_5 PF13857 250 - 298 2.1e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 283 - 345 2.9e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 297 - 345 9.6e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 351 - 442 4.7e-19 Ankyrin repeats (3 copies)
Ank_4 PF13637 363 - 400 7.9e-08 Ankyrin repeats (many copies)
Ank PF00023 379 - 411 6e-09 Ankyrin repeat
Ank_4 PF13637 384 - 433 1.3e-12 Ankyrin repeats (many copies)
Ank_5 PF13857 399 - 446 5.9e-06 Ankyrin repeats (many copies)
Ank PF00023 414 - 442 7.1e-06 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015548)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24420
malus_domestica MD03G1273500.v1.1 MD11G1296100.v1.1
prunus_persica Prupe.8G249900_v2.0.a1
pyrus_communis pycom03g21790 pycom11g26060
rosa_chinensis RchiOBHm_Chr6g0292251
rosa_laevigata RLG00000012048
rosa_multiflora Rmu_sc0002993.1_g000015
rosa_roxburghii Rroxscaffold_7G00175280
rosa_rugosa Rorug06G0224900
rosa_samantha Rh6AG338200 Rh6BG345500 Rh6CG352400 Rh6DG338400
rosa_wichuraiana Rw6G029430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 264, 1050
AccBSI CCGCTC 1 cut(s) 181
AccII CGCG 5 cut(s) 695, 800, 806, 1004, 1259
AccIII TCCGGA 1 cut(s) 614
AclWI GGATC 3 cut(s) 321, 434, 1184
AcoI YGGCCR 2 cut(s) 801, 811
AcsI RAATTY 3 cut(s) 401, 434, 760
AcvI CACGTG 2 cut(s) 394, 1276
AcyI GRCGYC 3 cut(s) 261, 549, 1047
AfaI GTAC 1 cut(s) 734
AfiI CCNNNNNNNGG 4 cut(s) 430, 1008, 1057, 1105
AgsI TTSAA 7 cut(s) 49, 401, 829, 1168, 1366, 1372, 1393
AjiI CACGTC 2 cut(s) 25, 757
AjnI CCWGG 1 cut(s) 306
AjuI GAANNNNNNNTTGG 4 cut(s) 512, 544, 899, 931
AluBI AGCT 9 cut(s) 40, 418, 484, 512, 654, 1239, 1310, 1329, 1451
AluI AGCT 9 cut(s) 40, 418, 484, 512, 654, 1239, 1310, 1329, 1451
Alw21I GWGCWC 5 cut(s) 42, 473, 486, 1213, 1312
Alw26I GTCTC 4 cut(s) 48, 121, 538, 1012
AlwI GGATC 3 cut(s) 321, 434, 1184
Ama87I CYCGRG 1 cut(s) 1311
Aor13HI TCCGGA 1 cut(s) 614
AoxI GGCC 6 cut(s) 276, 341, 801, 811, 921, 1314
ApeKI GCWGC 3 cut(s) 66, 493, 1249
ApoI RAATTY 3 cut(s) 401, 434, 760
AspLEI GCGC 4 cut(s) 71, 493, 808, 1259
AsuC2I CCSGG 8 cut(s) 340, 356, 424, 517, 586, 710, 1058, 1427
AsuHPI GGTGA 7 cut(s) 25, 115, 149, 235, 412, 958, 1129
AvaI CYCGRG 1 cut(s) 1311
AvaII GGWCC 7 cut(s) 336, 386, 500, 612, 1129, 1143, 1357
BaeGI GKGCMC 2 cut(s) 1014, 1275
BanII GRGCYC 3 cut(s) 42, 486, 1312
BauI CACGAG 1 cut(s) 1015
BbrPI CACGTG 2 cut(s) 394, 1276
Bbv12I GWGCWC 5 cut(s) 42, 473, 486, 1213, 1312
BbvI GCAGC 3 cut(s) 78, 480, 1236
BccI CCATC 2 cut(s) 145, 380
BceAI ACGGC 7 cut(s) 98, 202, 504, 826, 947, 999, 1208
BciT130I CCWGG 1 cut(s) 308
BcnI CCSGG 8 cut(s) 340, 356, 424, 517, 586, 710, 1058, 1427
BcoDI GTCTC 4 cut(s) 48, 121, 538, 1012
BfmI CTRYAG 1 cut(s) 871
BfoI RGCGCY 1 cut(s) 494
BlpI GCTNAGC 2 cut(s) 83, 480
Bme1390I CCNGG 9 cut(s) 308, 340, 356, 424, 517, 586, 710, 1058, 1427
Bme18I GGWCC 7 cut(s) 336, 386, 500, 612, 1129, 1143, 1357
BmeT110I CYCGRG 1 cut(s) 1311
BmgBI CACGTC 2 cut(s) 25, 757
BmiI GGNNCC 5 cut(s) 387, 502, 922, 1130, 1145
BmrFI CCNGG 9 cut(s) 308, 340, 356, 424, 517, 586, 710, 1058, 1427
BmrI ACTGGG 1 cut(s) 904
BmsI GCATC 2 cut(s) 1210, 1222
BmuI ACTGGG 1 cut(s) 904
BpmI CTGGAG 1 cut(s) 634
Bpu1102I GCTNAGC 2 cut(s) 83, 480
BpuMI CCSGG 8 cut(s) 340, 356, 424, 517, 586, 710, 1058, 1427
BsaAI YACGTR 2 cut(s) 394, 1276
BsaBI GATNNNNATC 1 cut(s) 794
BsaHI GRCGYC 3 cut(s) 261, 549, 1047
BsaI GGTCTC 2 cut(s) 48, 538
BsaJI CCNNGG 1 cut(s) 1224
BsaWI WCCGGW 1 cut(s) 614
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 4 cut(s) 430, 1008, 1057, 1105
Bse118I RCCGGY 2 cut(s) 333, 551
Bse1I ACTGG 1 cut(s) 899
Bse3DI GCAATG 1 cut(s) 859
Bse8I GATNNNNATC 1 cut(s) 794
BseAI TCCGGA 1 cut(s) 614
BseBI CCWGG 1 cut(s) 308
BseDI CCNNGG 1 cut(s) 1224
BseGI GGATG 1 cut(s) 1225
BseJI GATNNNNATC 1 cut(s) 794
BseLI CCNNNNNNNGG 4 cut(s) 430, 1008, 1057, 1105
BseMI GCAATG 1 cut(s) 859
BseMII CTCAG 3 cut(s) 227, 428, 471
BseNI ACTGG 1 cut(s) 899
BseRI GAGGAG 3 cut(s) 181, 194, 197
BseSI GKGCMC 2 cut(s) 1014, 1275
BseX3I CGGCCG 1 cut(s) 801
BseXI GCAGC 3 cut(s) 78, 480, 1236
BseYI CCCAGC 1 cut(s) 1024
BsgI GTGCAG 2 cut(s) 85, 1235
Bsh1236I CGCG 5 cut(s) 695, 800, 806, 1004, 1259
Bsh1285I CGRYCG 1 cut(s) 804
BshFI GGCC 6 cut(s) 278, 343, 803, 813, 923, 1316
BsiEI CGRYCG 1 cut(s) 804
BsiHKAI GWGCWC 5 cut(s) 42, 473, 486, 1213, 1312
BsiHKCI CYCGRG 1 cut(s) 1311
BslFI GGGAC 3 cut(s) 371, 486, 1142
BslI CCNNNNNNNGG 4 cut(s) 430, 1008, 1057, 1105
BsmAI GTCTC 4 cut(s) 48, 121, 538, 1012
BsmBI CGTCTC 1 cut(s) 121
BsmFI GGGAC 3 cut(s) 371, 486, 1142
BsmI GAATGC 1 cut(s) 526
BsnI GGCC 6 cut(s) 278, 343, 803, 813, 923, 1316
Bso31I GGTCTC 2 cut(s) 48, 538
BsoBI CYCGRG 1 cut(s) 1311
Bsp1286I GDGCHC 7 cut(s) 42, 473, 486, 1014, 1213, 1275, 1312
Bsp13I TCCGGA 1 cut(s) 614
Bsp1407I TGTACA 1 cut(s) 732
Bsp143I GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
Bsp1720I GCTNAGC 2 cut(s) 83, 480
BspANI GGCC 6 cut(s) 278, 343, 803, 813, 923, 1316
BspCNI CTCAG 3 cut(s) 226, 427, 472
BspEI TCCGGA 1 cut(s) 614
BspFNI CGCG 5 cut(s) 695, 800, 806, 1004, 1259
BspHI TCATGA 2 cut(s) 256, 1404
BspLI GGNNCC 5 cut(s) 387, 502, 922, 1130, 1145
BspPI GGATC 3 cut(s) 321, 434, 1184
BspQI GCTCTTC 1 cut(s) 1319
BspTNI GGTCTC 2 cut(s) 48, 538
BsrBI CCGCTC 1 cut(s) 181
BsrDI GCAATG 1 cut(s) 859
BsrFI RCCGGY 2 cut(s) 333, 551
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 1 cut(s) 899
BssAI RCCGGY 2 cut(s) 333, 551
BssECI CCNNGG 1 cut(s) 1224
BssMI GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
BssNI GRCGYC 3 cut(s) 261, 549, 1047
BssSI CACGAG 1 cut(s) 1015
Bst2BI CACGAG 1 cut(s) 1015
Bst2UI CCWGG 1 cut(s) 308
Bst4CI ACNGT 2 cut(s) 872, 1361
Bst6I CTCTTC 2 cut(s) 190, 1319
BstACI GRCGYC 3 cut(s) 261, 549, 1047
BstAUI TGTACA 1 cut(s) 732
BstBAI YACGTR 2 cut(s) 394, 1276
BstC8I GCNNGC 1 cut(s) 1237
BstDEI CTNAG 4 cut(s) 83, 213, 414, 480
BstDSI CCRYGG 1 cut(s) 1224
BstENI CCTNNNNNAGG 1 cut(s) 1103
BstF5I GGATG 1 cut(s) 1225
BstFNI CGCG 5 cut(s) 695, 800, 806, 1004, 1259
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 4 cut(s) 71, 493, 808, 1259
BstKTI GATC 6 cut(s) 226, 316, 429, 645, 994, 1179
BstMAI GTCTC 4 cut(s) 48, 121, 538, 1012
BstMBI GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
BstMCI CGRYCG 1 cut(s) 804
BstMWI GCNNNNNNNGC 7 cut(s) 16, 330, 490, 1109, 1265, 1307, 1422
BstNI CCWGG 1 cut(s) 308
BstSCI CCNGG 9 cut(s) 306, 338, 354, 422, 515, 584, 708, 1056, 1425
BstSFI CTRYAG 1 cut(s) 871
BstSLI GKGCMC 2 cut(s) 1014, 1275
BstUI CGCG 5 cut(s) 695, 800, 806, 1004, 1259
BstV1I GCAGC 3 cut(s) 78, 480, 1236
BstX2I RGATCY 2 cut(s) 313, 426
BstXI CCANNNNNNTGG 1 cut(s) 1354
BstYI RGATCY 2 cut(s) 313, 426
BstZI CGGCCG 1 cut(s) 801
BsuRI GGCC 6 cut(s) 278, 343, 803, 813, 923, 1316
BtgI CCRYGG 1 cut(s) 1224
BtgZI GCGATG 1 cut(s) 716
BtrI CACGTC 2 cut(s) 25, 757
BtsCI GGATG 1 cut(s) 1225
BtsI GCAGTG 1 cut(s) 1252
BtsIMutI CAGTG 2 cut(s) 892, 1252
Cac8I GCNNGC 1 cut(s) 1237
CciI TCATGA 2 cut(s) 256, 1404
CciNI GCGGCCGC 1 cut(s) 801
CfoI GCGC 4 cut(s) 71, 493, 808, 1259
Cfr10I RCCGGY 2 cut(s) 333, 551
CpoI CGGWCCG 2 cut(s) 336, 612
CseI GACGC 5 cut(s) 368, 557, 701, 1085, 1390
Csp6I GTAC 1 cut(s) 733
CspI CGGWCCG 2 cut(s) 336, 612
CviAII CATG 8 cut(s) 94, 103, 257, 283, 815, 1205, 1304, 1405
CviQI GTAC 1 cut(s) 733
DdeI CTNAG 4 cut(s) 83, 213, 414, 480
DpnI GATC 6 cut(s) 225, 315, 428, 644, 993, 1178
DpnII GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
EaeI YGGCCR 2 cut(s) 801, 811
EagI CGGCCG 1 cut(s) 801
Eam1104I CTCTTC 2 cut(s) 190, 1319
EarI CTCTTC 2 cut(s) 190, 1319
EciI GGCGGA 4 cut(s) 308, 320, 917, 1277
Ecl136II GAGCTC 3 cut(s) 40, 484, 1310
EclXI CGGCCG 1 cut(s) 801
Eco147I AGGCCT 1 cut(s) 278
Eco24I GRGCYC 3 cut(s) 42, 486, 1312
Eco31I GGTCTC 2 cut(s) 48, 538
Eco47I GGWCC 7 cut(s) 336, 386, 500, 612, 1129, 1143, 1357
Eco52I CGGCCG 1 cut(s) 801
Eco53kI GAGCTC 3 cut(s) 40, 484, 1310
Eco72I CACGTG 2 cut(s) 394, 1276
Eco88I CYCGRG 1 cut(s) 1311
EcoICRI GAGCTC 3 cut(s) 40, 484, 1310
EcoNI CCTNNNNNAGG 1 cut(s) 1103
EcoRI GAATTC 1 cut(s) 434
EcoRII CCWGG 1 cut(s) 306
EcoT38I GRGCYC 3 cut(s) 42, 486, 1312
Esp3I CGTCTC 1 cut(s) 121
FaeI CATG 8 cut(s) 97, 106, 260, 286, 818, 1208, 1307, 1408
FalI AAGNNNNNCTT 2 cut(s) 970, 1002
FaqI GGGAC 3 cut(s) 371, 486, 1142
FatI CATG 8 cut(s) 93, 102, 256, 282, 814, 1204, 1303, 1404
FauI CCCGC 4 cut(s) 183, 240, 511, 1261
FokI GGATG 1 cut(s) 1232
FriOI GRGCYC 3 cut(s) 42, 486, 1312
GlaI GCGC 4 cut(s) 70, 492, 807, 1258
GsaI CCCAGC 1 cut(s) 1028
GsuI CTGGAG 1 cut(s) 634
HaeII RGCGCY 1 cut(s) 494
HaeIII GGCC 6 cut(s) 278, 343, 803, 813, 923, 1316
HgaI GACGC 5 cut(s) 368, 557, 701, 1085, 1390
HhaI GCGC 4 cut(s) 71, 493, 808, 1259
Hin1I GRCGYC 3 cut(s) 261, 549, 1047
Hin1II CATG 8 cut(s) 97, 106, 260, 286, 818, 1208, 1307, 1408
Hin6I GCGC 4 cut(s) 69, 491, 806, 1257
HinP1I GCGC 4 cut(s) 69, 491, 806, 1257
HincII GTYRAC 1 cut(s) 769
HindII GTYRAC 1 cut(s) 769
HinfI GANTC 5 cut(s) 440, 575, 581, 790, 883
HphI GGTGA 7 cut(s) 25, 115, 149, 235, 412, 958, 1129
Hpy166II GTNNAC 3 cut(s) 769, 1120, 1228
Hpy188I TCNGA 9 cut(s) 223, 408, 433, 538, 570, 580, 642, 789, 848
Hpy188III TCNNGA 6 cut(s) 257, 615, 820, 1051, 1372, 1405
Hpy8I GTNNAC 3 cut(s) 769, 1120, 1228
Hpy99I CGWCG 6 cut(s) 113, 275, 695, 1046, 1049, 1079
HpyAV CCTTC 8 cut(s) 22, 85, 160, 628, 770, 901, 972, 1183
HpyCH4III ACNGT 2 cut(s) 872, 1361
HpyCH4IV ACGT 9 cut(s) 24, 261, 270, 348, 393, 756, 1047, 1275, 1460
HpyCH4V TGCA 5 cut(s) 66, 97, 688, 1153, 1252
HpyF10VI GCNNNNNNNGC 7 cut(s) 16, 330, 490, 1109, 1265, 1307, 1422
HpyF3I CTNAG 4 cut(s) 83, 213, 414, 480
HpySE526I ACGT 9 cut(s) 24, 261, 270, 348, 393, 756, 1047, 1275, 1460
Hsp92I GRCGYC 3 cut(s) 261, 549, 1047
Hsp92II CATG 8 cut(s) 97, 106, 260, 286, 818, 1208, 1307, 1408
HspAI GCGC 4 cut(s) 69, 491, 806, 1257
Kpn2I TCCGGA 1 cut(s) 614
Kzo9I GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
LguI GCTCTTC 1 cut(s) 1319
LmnI GCTCC 5 cut(s) 37, 291, 950, 1307, 1448
Lsp1109I GCAGC 3 cut(s) 78, 480, 1236
LweI GCATC 2 cut(s) 1210, 1222
MaeII ACGT 9 cut(s) 24, 261, 270, 348, 393, 756, 1047, 1275, 1460
MaeIII GTNAC 2 cut(s) 862, 964
MalI GATC 6 cut(s) 225, 315, 428, 644, 993, 1178
MbiI CCGCTC 1 cut(s) 181
MboI GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
MboII GAAGA 2 cut(s) 177, 1336
MflI RGATCY 2 cut(s) 313, 426
MhlI GDGCHC 7 cut(s) 42, 473, 486, 1014, 1213, 1275, 1312
MlyI GAGTC 1 cut(s) 892
MmeI TCCRAC 3 cut(s) 561, 860, 1050
MroI TCCGGA 1 cut(s) 614
MseI TTAA 3 cut(s) 450, 938, 1200
MslI CAYNNNNRTG 1 cut(s) 813
MspA1I CMGCKG 2 cut(s) 654, 1249
MspR9I CCNGG 9 cut(s) 308, 340, 356, 424, 517, 586, 710, 1058, 1427
Mva1269I GAATGC 1 cut(s) 526
MvaI CCWGG 1 cut(s) 308
MvnI CGCG 5 cut(s) 695, 800, 806, 1004, 1259
MwoI GCNNNNNNNGC 7 cut(s) 16, 330, 490, 1109, 1265, 1307, 1422
NciI CCSGG 8 cut(s) 340, 356, 424, 517, 586, 710, 1058, 1427
NdeII GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
NlaIII CATG 8 cut(s) 97, 106, 260, 286, 818, 1208, 1307, 1408
NlaIV GGNNCC 5 cut(s) 387, 502, 922, 1130, 1145
NmuCI GTSAC 1 cut(s) 964
NotI GCGGCCGC 1 cut(s) 801
PagI TCATGA 2 cut(s) 256, 1404
PceI AGGCCT 1 cut(s) 278
PciSI GCTCTTC 1 cut(s) 1319
PcsI WCGNNNNNNNCGW 2 cut(s) 267, 816
PctI GAATGC 1 cut(s) 526
PfeI GAWTC 4 cut(s) 440, 575, 581, 790
PflFI GACNNNGTC 2 cut(s) 680, 1046
PfoI TCCNGGA 2 cut(s) 354, 515
PleI GAGTC 1 cut(s) 891
PmaCI CACGTG 2 cut(s) 394, 1276
PmlI CACGTG 2 cut(s) 394, 1276
PpsI GAGTC 1 cut(s) 891
Ppu21I YACGTR 2 cut(s) 394, 1276
Psp124BI GAGCTC 3 cut(s) 42, 486, 1312
Psp6I CCWGG 1 cut(s) 306
PspCI CACGTG 2 cut(s) 394, 1276
PspFI CCCAGC 1 cut(s) 1024
PspGI CCWGG 1 cut(s) 306
PspN4I GGNNCC 5 cut(s) 387, 502, 922, 1130, 1145
PsuI RGATCY 2 cut(s) 313, 426
PsyI GACNNNGTC 2 cut(s) 680, 1046
PvuII CAGCTG 1 cut(s) 654
RsaI GTAC 1 cut(s) 734
RsaNI GTAC 1 cut(s) 733
RseI CAYNNNNRTG 1 cut(s) 813
Rsr2I CGGWCCG 2 cut(s) 336, 612
RsrII CGGWCCG 2 cut(s) 336, 612
SacI GAGCTC 3 cut(s) 42, 486, 1312
SapI GCTCTTC 1 cut(s) 1319
SaqAI TTAA 3 cut(s) 450, 938, 1200
Sau3AI GATC 6 cut(s) 223, 313, 426, 642, 991, 1176
SchI GAGTC 1 cut(s) 892
ScrFI CCNGG 9 cut(s) 308, 340, 356, 424, 517, 586, 710, 1058, 1427
SduI GDGCHC 7 cut(s) 42, 473, 486, 1014, 1213, 1275, 1312
SfaNI GCATC 2 cut(s) 1210, 1222
SfcI CTRYAG 1 cut(s) 871
SgrAI CRCCGGYG 1 cut(s) 551
SinI GGWCC 7 cut(s) 336, 386, 500, 612, 1129, 1143, 1357
SmiMI CAYNNNNRTG 1 cut(s) 813
SseBI AGGCCT 1 cut(s) 278
SstI GAGCTC 3 cut(s) 42, 486, 1312
StuI AGGCCT 1 cut(s) 278
StyD4I CCNGG 9 cut(s) 306, 338, 354, 422, 515, 584, 708, 1056, 1425
TaaI ACNGT 2 cut(s) 872, 1361
TaiI ACGT 9 cut(s) 27, 264, 273, 351, 396, 759, 1050, 1278, 1463
TaqI TCGA 7 cut(s) 273, 438, 714, 781, 819, 990, 1179
TaqII GACCGA 2 cut(s) 488, 600
TatI WGTACW 1 cut(s) 732
TfiI GAWTC 4 cut(s) 440, 575, 581, 790
Tru1I TTAA 3 cut(s) 450, 938, 1200
Tru9I TTAA 3 cut(s) 450, 938, 1200
TscAI CASTG 2 cut(s) 899, 1259
TseFI GTSAC 1 cut(s) 964
TseI GCWGC 3 cut(s) 66, 493, 1249
Tsp45I GTSAC 1 cut(s) 964
TspDTI ATGAA 3 cut(s) 719, 782, 1421
TspGWI ACGGA 4 cut(s) 97, 881, 990, 1461
TspRI CASTG 2 cut(s) 899, 1259
Tth111I GACNNNGTC 2 cut(s) 680, 1046
VpaK11BI GGWCC 7 cut(s) 336, 386, 500, 612, 1129, 1143, 1357
XagI CCTNNNNNAGG 1 cut(s) 1103
XapI RAATTY 3 cut(s) 401, 434, 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 379
ZraI GACGTC 2 cut(s) 262, 1048
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.