Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0016491

Physical Location & Seq

Genomic Coordinates Forward (+)

6572588 .. 6575980

Gene Structure 3393 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1093200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTCAGACGGTGAAGCTAACGCTGCGGATGCGGCCAACGCCGAACCCCACGACGTTGTCTCGCTTCTTTCTTCTGCGGAGAGGGACTATCTTGTCCGTAACAATGGTGATCAGATTAAGGTTGAGAGCTTGAAGGGGAAAAAGCTTGGGCTGTATTTTTCTGCATCATGGTGCAGTCCATGCCAACAATTCACCCCAGCTTTAGTCGAGGCCTACAATGAGATCTCTCCAAATGGTGATTTTGAGATTATATTTATCTCGGCTGATGAAGATGATGAGTCATTCAATGGGTACTTCTCCAAGATGCCATGGCTTGCAATTCCGTTCTCTGATTCAGACGCACGTGATAGTGTGGATGGATTGTTCAAAGTTCGTGGGATACCCCATCTTGTGATACTTGGCGAAGATGGGAAAGTTTTGAGTGACGATGGAGTTGAGATTCTTCAGGAGTACGGAGTTGATTCCTACCCTTTTACACAGGAAAAGATAAAAGAACTAAAAGATCAAGAGGAAGCTGCCAGAAGGGAACAGTCCCTGAAAAAAATCTTGGTCTCCCGCTCACGCGACTTTGTAATTTCAAATAACGGAGAGAAGGTGCCCATCTCTGAACTAGAAGGGAAGATAGTGGGTCTCTATTTCTCATTGTCTTCATACAGTCCGTGTGCAGAATATACTCCAAAACTTGTGGACGTCTATGAGAAGCTGAAGGGAAATGGAGAGAACTTCGAGATTGTGTTGCTGCCACTTGATGATGATGAAAAATCATTCAAGAAACATTTTGAGAAAATGCCTTGGTTTTCTTTACCCAATGGGGACAAAAATGTTGAGAAATTGGCTCGGTACTTTGAGCTGTCAACCTTACCCACTTTGGTTATTATTGGGGCAGATGGTAAAACACTTAGTAAGAACGTTACTGATGCCATTGACGAGCATGGGAGTCTGGCATACCCCTTCACGCCAGAGAAGTTTGCAGAGCTCGATGAGATAGAGAAGGCAAAGGAGAAAGCTCAAACCCTGGAGTCACTTTTGATTTCCGGGGATCGAAATTTTGTCATTGGAAAAGATGAAACTGAGGTTCCTGTGACAGATCTAGTGGGGAAGAACATCCTCCTTTATTTCTCAGCTCACTGGTGCCCTCCTTGCCGCGCCTTTCTGCCAAAACTTGTTGAAGCCTACCACGAGATTAAGGCAAAGGACGATGCATTTGAAACCATTTTCATCTCTAGTGACCGGGATCAGACCTCTTTCGATGACTTCTTTGCTAAAATGCCATGGCTTGCTCTTCCCTTTGGCGATGAAAGAAAAGTGCCCTTGAGTCGCAGATTCAGGGTCCAGGGCATCCCCATGCTCGTCGCCCTTGGTCCTACTGGCAAAACTGTCACAAAAGAAGCAAGAAATCTTGTCACGCTTCATGGGGCGAATGCTTATCCTTTCACCGAAGAGCGACTGAAGGAGATGGAAGTGGAATATGAGGAGATGGCAAAAGGGTGGCCTGAGAAGTTGAAGAGTGCACGCCATGAGAAGCACGAGCTTGTCCTCACGCGACGTACAGGATTTACGTGTGATAAGTGCGATAAATCGGGACTGGTGTGGTCATTCTATTGTAAGGAGTGTAATTTCAATCTCCACCCAAAGTGCGCGTTGGAGGCAGATAAAGAGACCGAAAATGATGCCAAGCAGGAAGAAGAGGAAGCCAAAGAAGGAGGGGTTTGTGACGGTGATGTTTGTACAAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

580

Amino Acids

65.14

Weight (kDa)

4.84

Isoelectric Point (pI)

34.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Redoxin	PF08534	31 - 140	1.2e-06	Redoxin
AhpC-TSA	PF00578	34 - 139	2.2e-07	AhpC/TSA family
Thioredoxin_8	PF13905	46 - 139	9.2e-25	Thioredoxin-like
Thioredoxin_8	PF13905	206 - 298	2.2e-24	Thioredoxin-like
Redoxin	PF08534	353 - 422	3.9e-06	Redoxin
AhpC-TSA	PF00578	355 - 445	7.2e-08	AhpC/TSA family
Thioredoxin_8	PF13905	366 - 458	1.4e-26	Thioredoxin-like
Thioredoxin_2	PF13098	366 - 456	5.9e-07	Thioredoxin-like domain
C1_2	PF03107	505 - 547	1.6e-08	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60420
malus_domestica	MD13G1093200.v1.1 MD16G1094200.v1.1 MD16G1094400.v1.1
prunus_persica	Prupe.1G171000_v2.0.a1 Prupe.1G171000_v2.0.a1 Prupe.1G171000_v2.0.a1 Prupe.1G252100_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1
pyrus_communis	pycom13g08120 pycom16g08020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	92
AatII	GACGTC	1 cut(s)	693
AccB1I	GGYRCC	2 cut(s)	595, 1131
AccBSI	CCGCTC	1 cut(s)	558
AccII	CGCG	4 cut(s)	564, 1146, 1543, 1640
AciI	CCGC	5 cut(s)	26, 32, 77, 556, 1144
AclI	AACGTT	1 cut(s)	909
AclWI	GGATC	2 cut(s)	1047, 1242
AcoI	YGGCCR	1 cut(s)	33
AcsI	RAATTY	1 cut(s)	1045
AcuI	CTGAAG	3 cut(s)	428, 725, 1469
AcvI	CACGTG	1 cut(s)	344
AcyI	GRCGYC	1 cut(s)	690
AfaI	GTAC	5 cut(s)	293, 452, 842, 1549, 1729
AflIII	ACRYGT	1 cut(s)	1559
AgsI	TTSAA	9 cut(s)	133, 286, 367, 579, 769, 1169, 1208, 1504, 1621
AjnI	CCWGG	2 cut(s)	1014, 1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	530, 562
AloI	GAACNNNNNNTCC	2 cut(s)	347, 379
Alw21I	GWGCWC	2 cut(s)	978, 1513
Alw26I	GTCTC	4 cut(s)	64, 556, 635, 1652
Alw44I	GTGCAC	1 cut(s)	1509
AlwI	GGATC	2 cut(s)	1047, 1242
AlwNI	CAGNNNCTG	1 cut(s)	535
AoxI	GGCC	3 cut(s)	33, 210, 1490
ApaLI	GTGCAC	1 cut(s)	1509
ApeKI	GCWGC	3 cut(s)	23, 515, 739
ApoI	RAATTY	1 cut(s)	1045
ArsI	GACNNNNNNTTYG	2 cut(s)	1187, 1219
AspLEI	GCGC	2 cut(s)	1148, 1640
AspS9I	GGNCC	2 cut(s)	1330, 1361
AsuC2I	CCSGG	2 cut(s)	1036, 1232
AsuHPI	GGTGA	6 cut(s)	23, 119, 184, 248, 1426, 1730
AvaII	GGWCC	2 cut(s)	1330, 1361
BaeGI	GKGCMC	4 cut(s)	600, 1136, 1311, 1513
BanI	GGYRCC	2 cut(s)	595, 1131
BanII	GRGCYC	1 cut(s)	978
BauI	CACGAG	2 cut(s)	1178, 1526
BbrPI	CACGTG	1 cut(s)	344
BbsI	GAAGAC	1 cut(s)	639
Bbv12I	GWGCWC	2 cut(s)	978, 1513
BbvI	GCAGC	3 cut(s)	10, 502, 726
BccI	CCATC	8 cut(s)	350, 393, 401, 422, 608, 881, 1450, 1471
BcgI	CGANNNNNNTGC	2 cut(s)	1652, 1686
BciT130I	CCWGG	2 cut(s)	1016, 1334
BciVI	GTATCC	1 cut(s)	372
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	2 cut(s)	1036, 1232
BcoDI	GTCTC	4 cut(s)	64, 556, 635, 1652
BfaI	CTAG	3 cut(s)	611, 1091, 1224
BfuI	GTATCC	1 cut(s)	372
BglII	AGATCT	2 cut(s)	222, 1087
BisI	GCNGC	5 cut(s)	24, 33, 516, 740, 1144
BlsI	GCNGC	5 cut(s)	25, 34, 517, 741, 1145
Bme1390I	CCNGG	4 cut(s)	1016, 1036, 1232, 1334
Bme18I	GGWCC	2 cut(s)	1330, 1361
BmgT120I	GGNCC	2 cut(s)	1330, 1361
BmiI	GGNNCC	4 cut(s)	597, 1077, 1133, 1331
BmrFI	CCNGG	4 cut(s)	1016, 1036, 1232, 1334
BmsI	GCATC	7 cut(s)	19, 173, 294, 907, 1189, 1347, 1660
BpiI	GAAGAC	1 cut(s)	639
BpmI	CTGGAG	1 cut(s)	1037
BpuEI	CTTGAG	1 cut(s)	1333
BpuMI	CCSGG	2 cut(s)	1036, 1232
BsaAI	YACGTR	2 cut(s)	344, 1560
BsaHI	GRCGYC	1 cut(s)	690
BsaI	GGTCTC	3 cut(s)	556, 635, 1652
BsaJI	CCNNGG	7 cut(s)	308, 791, 1014, 1035, 1271, 1333, 1357
BsaXI	ACNNNNNCTCC	2 cut(s)	579, 609
Bse1I	ACTGG	3 cut(s)	1133, 1372, 1590
BseBI	CCWGG	2 cut(s)	1016, 1334
BseDI	CCNNGG	7 cut(s)	308, 791, 1014, 1035, 1271, 1333, 1357
BseGI	GGATG	4 cut(s)	34, 361, 1104, 1338
BseMII	CTCAG	3 cut(s)	1062, 1134, 1485
BseNI	ACTGG	3 cut(s)	1133, 1372, 1590
BseRI	GAGGAG	1 cut(s)	1487
BseSI	GKGCMC	4 cut(s)	600, 1136, 1311, 1513
BseXI	GCAGC	3 cut(s)	10, 502, 726
BseYI	CCCAGC	1 cut(s)	196
BsgI	GTGCAG	2 cut(s)	193, 684
Bsh1236I	CGCG	4 cut(s)	564, 1146, 1543, 1640
BshFI	GGCC	3 cut(s)	35, 212, 1492
BshNI	GGYRCC	2 cut(s)	595, 1131
BsiHKAI	GWGCWC	2 cut(s)	978, 1513
BsiSI	CCGG	2 cut(s)	1035, 1231
BslFI	GGGAC	4 cut(s)	98, 517, 827, 1596
BsmAI	GTCTC	4 cut(s)	64, 556, 635, 1652
BsmFI	GGGAC	4 cut(s)	98, 517, 827, 1596
BsmI	GAATGC	1 cut(s)	1426
BsnI	GGCC	3 cut(s)	35, 212, 1492
Bso31I	GGTCTC	3 cut(s)	556, 635, 1652
Bsp1286I	GDGCHC	5 cut(s)	600, 978, 1136, 1311, 1513
Bsp1407I	TGTACA	1 cut(s)	1727
Bsp143I	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
Bsp19I	CCATGG	2 cut(s)	308, 1271
BspACI	CCGC	5 cut(s)	26, 32, 77, 556, 1144
BspANI	GGCC	3 cut(s)	35, 212, 1492
BspCNI	CTCAG	3 cut(s)	1063, 1133, 1486
BspFNI	CGCG	4 cut(s)	564, 1146, 1543, 1640
BspLI	GGNNCC	4 cut(s)	597, 1077, 1133, 1331
BspPI	GGATC	2 cut(s)	1047, 1242
BspQI	GCTCTTC	2 cut(s)	1287, 1434
BspT107I	GGYRCC	2 cut(s)	595, 1131
BspTNI	GGTCTC	3 cut(s)	556, 635, 1652
BsrBI	CCGCTC	1 cut(s)	558
BsrGI	TGTACA	1 cut(s)	1727
BsrI	ACTGG	3 cut(s)	1133, 1372, 1590
BssECI	CCNNGG	7 cut(s)	308, 791, 1014, 1035, 1271, 1333, 1357
BssMI	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
BssNI	GRCGYC	1 cut(s)	690
BssSI	CACGAG	2 cut(s)	1178, 1526
BssT1I	CCWWGG	4 cut(s)	308, 791, 1271, 1357
Bst2BI	CACGAG	2 cut(s)	1178, 1526
Bst2UI	CCWGG	2 cut(s)	1016, 1334
Bst4CI	ACNGT	5 cut(s)	11, 531, 656, 1378, 1718
Bst6I	CTCTTC	4 cut(s)	1287, 1434, 1499, 1680
BstACI	GRCGYC	1 cut(s)	690
BstAPI	GCANNNNNTGC	1 cut(s)	180
BstAUI	TGTACA	1 cut(s)	1727
BstBAI	YACGTR	2 cut(s)	344, 1560
BstC8I	GCNNGC	3 cut(s)	315, 1278, 1513
BstDEI	CTNAG	4 cut(s)	899, 1071, 1120, 1494
BstDSI	CCRYGG	2 cut(s)	308, 1271
BstF5I	GGATG	4 cut(s)	34, 361, 1104, 1338
BstFNI	CGCG	4 cut(s)	564, 1146, 1543, 1640
BstHHI	GCGC	2 cut(s)	1148, 1640
BstKTI	GATC	6 cut(s)	112, 225, 505, 1042, 1090, 1237
BstMAI	GTCTC	4 cut(s)	64, 556, 635, 1652
BstMBI	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 29, 32, 38, 180, 1140, 1646
BstNI	CCWGG	2 cut(s)	1016, 1334
BstSCI	CCNGG	4 cut(s)	1014, 1034, 1230, 1332
BstSLI	GKGCMC	4 cut(s)	600, 1136, 1311, 1513
BstUI	CGCG	4 cut(s)	564, 1146, 1543, 1640
BstV1I	GCAGC	3 cut(s)	10, 502, 726
BstV2I	GAAGAC	1 cut(s)	639
BstX2I	RGATCY	2 cut(s)	222, 1087
BstYI	RGATCY	2 cut(s)	222, 1087
BsuI	GTATCC	1 cut(s)	372
BsuRI	GGCC	3 cut(s)	35, 212, 1492
BtgI	CCRYGG	2 cut(s)	308, 1271
BtgZI	GCGATG	1 cut(s)	1308
BtsCI	GGATG	4 cut(s)	34, 361, 1104, 1338
BtsIMutI	CAGTG	1 cut(s)	1126
Cac8I	GCNNGC	3 cut(s)	315, 1278, 1513
CaiI	CAGNNNCTG	1 cut(s)	535
CfoI	GCGC	2 cut(s)	1148, 1640
Cfr13I	GGNCC	2 cut(s)	1330, 1361
CseI	GACGC	1 cut(s)	347
Csp6I	GTAC	5 cut(s)	292, 451, 841, 1548, 1728
CspCI	CAANNNNNGTGG	4 cut(s)	355, 390, 666, 701
CviAII	CATG	8 cut(s)	168, 180, 309, 932, 1272, 1345, 1412, 1517
CviQI	GTAC	5 cut(s)	292, 451, 841, 1548, 1728
DdeI	CTNAG	4 cut(s)	899, 1071, 1120, 1494
DpnI	GATC	6 cut(s)	111, 224, 504, 1041, 1089, 1236
DpnII	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
DrdI	GACNNNNNNGTC	1 cut(s)	92
DseDI	GACNNNNNNGTC	1 cut(s)	92
EaeI	YGGCCR	1 cut(s)	33
Eam1104I	CTCTTC	4 cut(s)	1287, 1434, 1499, 1680
EarI	CTCTTC	4 cut(s)	1287, 1434, 1499, 1680
Ecl136II	GAGCTC	1 cut(s)	976
Eco130I	CCWWGG	4 cut(s)	308, 791, 1271, 1357
Eco147I	AGGCCT	1 cut(s)	212
Eco24I	GRGCYC	1 cut(s)	978
Eco31I	GGTCTC	3 cut(s)	556, 635, 1652
Eco47I	GGWCC	2 cut(s)	1330, 1361
Eco53kI	GAGCTC	1 cut(s)	976
Eco57I	CTGAAG	3 cut(s)	428, 725, 1469
Eco72I	CACGTG	1 cut(s)	344
EcoICRI	GAGCTC	1 cut(s)	976
EcoRII	CCWGG	2 cut(s)	1014, 1332
EcoT14I	CCWWGG	4 cut(s)	308, 791, 1271, 1357
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	1 cut(s)	978
ErhI	CCWWGG	4 cut(s)	308, 791, 1271, 1357
FaeI	CATG	8 cut(s)	171, 183, 312, 935, 1275, 1348, 1415, 1520
FaqI	GGGAC	4 cut(s)	98, 517, 827, 1596
FatI	CATG	8 cut(s)	167, 179, 308, 931, 1271, 1344, 1411, 1516
FauI	CCCGC	1 cut(s)	563
FbaI	TGATCA	1 cut(s)	109
Fnu4HI	GCNGC	5 cut(s)	24, 33, 516, 740, 1144
FokI	GGATG	4 cut(s)	41, 368, 1091, 1325
FriOI	GRGCYC	1 cut(s)	978
Fsp4HI	GCNGC	5 cut(s)	24, 33, 516, 740, 1144
FspBI	CTAG	3 cut(s)	611, 1091, 1224
GlaI	GCGC	2 cut(s)	1147, 1639
GluI	GCNGC	5 cut(s)	24, 33, 516, 740, 1144
GsaI	CCCAGC	1 cut(s)	200
GsuI	CTGGAG	1 cut(s)	1037
HaeIII	GGCC	3 cut(s)	35, 212, 1492
HapII	CCGG	2 cut(s)	1035, 1231
HgaI	GACGC	1 cut(s)	347
HhaI	GCGC	2 cut(s)	1148, 1640
Hin1I	GRCGYC	1 cut(s)	690
Hin1II	CATG	8 cut(s)	171, 183, 312, 935, 1275, 1348, 1415, 1520
Hin6I	GCGC	2 cut(s)	1146, 1638
HinP1I	GCGC	2 cut(s)	1146, 1638
HincII	GTYRAC	1 cut(s)	855
HindII	GTYRAC	1 cut(s)	855
HindIII	AAGCTT	2 cut(s)	143, 1734
HinfI	GANTC	8 cut(s)	278, 332, 439, 461, 937, 1019, 1315, 1323
HpaII	CCGG	2 cut(s)	1035, 1231
HphI	GGTGA	6 cut(s)	23, 119, 184, 248, 1426, 1730
Hpy166II	GTNNAC	3 cut(s)	688, 855, 1511
Hpy188I	TCNGA	6 cut(s)	7, 114, 331, 337, 607, 1239
Hpy188III	TCNNGA	5 cut(s)	446, 506, 727, 769, 1581
Hpy8I	GTNNAC	3 cut(s)	688, 855, 1511
Hpy99I	CGWCG	3 cut(s)	56, 1355, 1548
HpyAV	CCTTC	9 cut(s)	127, 516, 586, 608, 700, 961, 985, 1444, 1694
HpyCH4III	ACNGT	5 cut(s)	11, 531, 656, 1378, 1718
HpyCH4IV	ACGT	6 cut(s)	54, 343, 690, 909, 1546, 1559
HpyCH4V	TGCA	7 cut(s)	164, 174, 317, 665, 971, 1202, 1511
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 29, 32, 38, 180, 1140, 1646
HpyF3I	CTNAG	4 cut(s)	899, 1071, 1120, 1494
HpySE526I	ACGT	6 cut(s)	54, 343, 690, 909, 1546, 1559
Hsp92I	GRCGYC	1 cut(s)	690
Hsp92II	CATG	8 cut(s)	171, 183, 312, 935, 1275, 1348, 1415, 1520
HspAI	GCGC	2 cut(s)	1146, 1638
Ksp22I	TGATCA	1 cut(s)	109
Kzo9I	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
LguI	GCTCTTC	2 cut(s)	1287, 1434
Lsp1109I	GCAGC	3 cut(s)	10, 502, 726
LweI	GCATC	7 cut(s)	19, 173, 294, 907, 1189, 1347, 1660
MaeI	CTAG	3 cut(s)	611, 1091, 1224
MaeII	ACGT	6 cut(s)	54, 343, 690, 909, 1546, 1559
MaeIII	GTNAC	9 cut(s)	98, 422, 910, 1020, 1081, 1226, 1378, 1402, 1712
MalI	GATC	6 cut(s)	111, 224, 504, 1041, 1089, 1236
MbiI	CCGCTC	1 cut(s)	558
MboI	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
MflI	RGATCY	2 cut(s)	222, 1087
MhlI	GDGCHC	5 cut(s)	600, 978, 1136, 1311, 1513
MluCI	AATT	6 cut(s)	188, 318, 573, 830, 1045, 1615
MlyI	GAGTC	4 cut(s)	287, 946, 1028, 1324
MmeI	TCCRAC	1 cut(s)	1623
Mph1103I	ATGCAT	1 cut(s)	1204
MseI	TTAA	3 cut(s)	117, 1185, 1738
MslI	CAYNNNNRTG	2 cut(s)	169, 1343
MspI	CCGG	2 cut(s)	1035, 1231
MspR9I	CCNGG	4 cut(s)	1016, 1036, 1232, 1334
Mva1269I	GAATGC	1 cut(s)	1426
MvaI	CCWGG	2 cut(s)	1016, 1334
MvnI	CGCG	4 cut(s)	564, 1146, 1543, 1640
MwoI	GCNNNNNNNGC	7 cut(s)	23, 29, 32, 38, 180, 1140, 1646
NciI	CCSGG	2 cut(s)	1036, 1232
NcoI	CCATGG	2 cut(s)	308, 1271
NdeII	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
NlaIII	CATG	8 cut(s)	171, 183, 312, 935, 1275, 1348, 1415, 1520
NlaIV	GGNNCC	4 cut(s)	597, 1077, 1133, 1331
NmeAIII	GCCGAG	1 cut(s)	239
NmuCI	GTSAC	7 cut(s)	422, 1020, 1081, 1226, 1378, 1402, 1712
NsiI	ATGCAT	1 cut(s)	1204
PceI	AGGCCT	1 cut(s)	212
PciSI	GCTCTTC	2 cut(s)	1287, 1434
PctI	GAATGC	1 cut(s)	1426
PfeI	GAWTC	4 cut(s)	332, 439, 461, 1323
PflFI	GACNNNGTC	1 cut(s)	56
PkrI	GCNGC	5 cut(s)	25, 34, 517, 741, 1145
PleI	GAGTC	4 cut(s)	286, 945, 1027, 1323
PmaCI	CACGTG	1 cut(s)	344
PmlI	CACGTG	1 cut(s)	344
PpsI	GAGTC	4 cut(s)	286, 945, 1027, 1323
Ppu21I	YACGTR	2 cut(s)	344, 1560
Psp124BI	GAGCTC	1 cut(s)	978
Psp1406I	AACGTT	1 cut(s)	909
Psp6I	CCWGG	2 cut(s)	1014, 1332
PspCI	CACGTG	1 cut(s)	344
PspFI	CCCAGC	1 cut(s)	196
PspGI	CCWGG	2 cut(s)	1014, 1332
PspN4I	GGNNCC	4 cut(s)	597, 1077, 1133, 1331
PspPI	GGNCC	2 cut(s)	1330, 1361
PstNI	CAGNNNCTG	1 cut(s)	535
PsuI	RGATCY	2 cut(s)	222, 1087
PsyI	GACNNNGTC	1 cut(s)	56
RsaI	GTAC	5 cut(s)	293, 452, 842, 1549, 1729
RsaNI	GTAC	5 cut(s)	292, 451, 841, 1548, 1728
RseI	CAYNNNNRTG	2 cut(s)	169, 1343
SacI	GAGCTC	1 cut(s)	978
SapI	GCTCTTC	2 cut(s)	1287, 1434
SaqAI	TTAA	3 cut(s)	117, 1185, 1738
SatI	GCNGC	5 cut(s)	24, 33, 516, 740, 1144
Sau3AI	GATC	6 cut(s)	109, 222, 502, 1039, 1087, 1234
Sau96I	GGNCC	2 cut(s)	1330, 1361
SchI	GAGTC	4 cut(s)	287, 946, 1028, 1324
ScrFI	CCNGG	4 cut(s)	1016, 1036, 1232, 1334
SduI	GDGCHC	5 cut(s)	600, 978, 1136, 1311, 1513
SfaNI	GCATC	7 cut(s)	19, 173, 294, 907, 1189, 1347, 1660
SinI	GGWCC	2 cut(s)	1330, 1361
SmiMI	CAYNNNNRTG	2 cut(s)	169, 1343
SmlI	CTYRAG	1 cut(s)	1312
SmoI	CTYRAG	1 cut(s)	1312
Sse9I	AATT	6 cut(s)	188, 318, 573, 830, 1045, 1615
SseBI	AGGCCT	1 cut(s)	212
SsiI	CCGC	5 cut(s)	26, 32, 77, 556, 1144
SspMI	CTAG	3 cut(s)	611, 1091, 1224
SstI	GAGCTC	1 cut(s)	978
StuI	AGGCCT	1 cut(s)	212
StyD4I	CCNGG	4 cut(s)	1014, 1034, 1230, 1332
StyI	CCWWGG	4 cut(s)	308, 791, 1271, 1357
TaaI	ACNGT	5 cut(s)	11, 531, 656, 1378, 1718
TaiI	ACGT	6 cut(s)	57, 346, 693, 912, 1549, 1562
TaqI	TCGA	5 cut(s)	207, 726, 978, 1042, 1248
TaqII	GACCGA	1 cut(s)	1676
TasI	AATT	6 cut(s)	188, 318, 573, 830, 1045, 1615
TatI	WGTACW	1 cut(s)	1727
TauI	GCSGC	2 cut(s)	35, 1146
TfiI	GAWTC	4 cut(s)	332, 439, 461, 1323
Tru1I	TTAA	3 cut(s)	117, 1185, 1738
Tru9I	TTAA	3 cut(s)	117, 1185, 1738
TscAI	CASTG	1 cut(s)	1133
TseFI	GTSAC	7 cut(s)	422, 1020, 1081, 1226, 1378, 1402, 1712
TseI	GCWGC	3 cut(s)	23, 515, 739
Tsp45I	GTSAC	7 cut(s)	422, 1020, 1081, 1226, 1378, 1402, 1712
TspDTI	ATGAA	7 cut(s)	282, 639, 771, 1080, 1207, 1311, 1400
TspGWI	ACGGA	5 cut(s)	86, 312, 468, 600, 648
TspRI	CASTG	1 cut(s)	1133
Tth111I	GACNNNGTC	1 cut(s)	56
VneI	GTGCAC	1 cut(s)	1509
VpaK11BI	GGWCC	2 cut(s)	1330, 1361
XapI	RAATTY	1 cut(s)	1045
XspI	CTAG	3 cut(s)	611, 1091, 1224
ZraI	GACGTC	1 cut(s)	691
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.