Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0016491

Physical Location & Seq

Genomic Coordinates Forward (+)

6531353 .. 6534704

Gene Structure 3352 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1094400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTCGGACGGCGATGTTAAAGCTGCCGAGCTGGTCGGCGCCGAACCCCACGACTTTGTCTCGCTTCTTTCGTCTTCCGAGAGGGACTTTCTTGTCCGTAACAATGGTGATCAGATTAAGGTTGAGAGCTTGAAGGGGAAAAAGCTTGGGCTGTATTTTTCTGCATCATGGTGCGGTCCATGCAAACGATTCACCCCAGCTTTAGTTGAGGCCTACAATGAACTCTCTCCAAAAGGTGATTTTGAGATTGTATTTATCTCCGCTGATGAAGACGATGAGTCATTCGAAGGGTACTTCGCGAAGATGCCATGGCTTGCATTTCCGTTCTCTGATTCAGAGGCACGCGATCGCGTGGACGAGTTGTTCAAAGTTAGAGGGATACCCCATCTTGTGATCCTTGGCGAAGATGGGAAAGTTTTGAGTGACAGTGGAGTTGAGATTATTCAGGAGTATGGAGCTGATGCGTACCCTTTTACGCTGGAAAAGTTGAAAGAGCTGAAAGATGAAGAAGAAGCTGCCAGAAGGGATCAGTCCTTGAAAACAATCCTGGTCACCCGCTCGCGCGACTTTGTAATTTCAAATGATGGAGAGAAGGTGCCCGTCTCTGAACTAGAGGGGAAGATAGTGGGTCTCTATTTCTCGTTGTCTTTGTACGGTCCATGCGTAGAATTTACTCCAAAACTTGTGGAGGCTCATGATAAGCTAAAAGCAAATGGAGAGAACTTCGAGATTGTGTTGGTGCCACTTGATGATGATGAAGAATCATTCAAGCAATATTTTGAGAAAATGCCTTGGTTTTCTTTACCCATCGGGGACAAAAGTGTACAGAAGTTGGCTCGGTACTTTGAGCTCTCAACCTTGCCCACAGTGGTTATTATTGGGGCAGATGGTAAAACACTTGGTGAGAACGTTGCTGATGCCATTGACGAGCATGGGAGTCTGGCTTACCCCTTCACACCAGAGAAGTTTGCAGAGCTCGTTGAGATAGAAAAGGCAAAGGAGAAAGCTCAAACCCTGGAGTCAATTTTGATTTCCGGGGATCGAAATTTTGTCATTGGAAAAGATGGAACTCAGATCCCTGTGACAGATCTAGTGGGGAAGAACATTCTCCTTTACTTCTCAGCTCACTGGTGCCCTCCATGCCGTGCCTTTCTGCCAAAACTTGTTGAAGCCTACCATGGGATTAAGGCCAAGGACGATGCATTTGAAGTCATTTTCATCTCCAGTGACAGAGACCAAGGCTCTTTTGATGAGTTTTTCGCCACAATGCCATGGCTTGCTCTTCCCTTTGGTGACTCAAGGAAAGCGTTCTTGAGTCGCAAATTCAAGGTCCAGGGCATCCCCATGCTCATAGCAATCGGTCCTACTGGCCAAACCGTCACAAAAGAAGCAAGAAATCTCATCATGCGTCATGGGGCAAATGCTTATCCTTTCACCGAAGAGCGAGTGAAGGAGATTGAAGCGGAATTTGAGGAGATGGCAAAAGGGTGGCCTGAGAAGTTGAAGAGTGCACTCCATGAGAAGCACGAGCTTGTGCTCTCGAAGCGTACAGCTTTTGTGTGTGATGGGTGCGAAGAACCGGGAGAGGTCTGGTCATTCTACTGCAAGGAGTGTGATTTCGATCTCCACCCGAAGTGCGCGTTGGAGGGAGATAAAAAGACGGAAAATGGTGCCAAGCAGGAAGAAGACGAGTCCAAAGAAGGATGGGTTTGTGACGGTGATGTTTGTACAAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

580

Amino Acids

64.88

Weight (kDa)

4.79

Isoelectric Point (pI)

34.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Redoxin	PF08534	32 - 141	1.3e-07	Redoxin
AhpC-TSA	PF00578	33 - 139	4e-08	AhpC/TSA family
Thioredoxin_8	PF13905	46 - 139	5.5e-26	Thioredoxin-like
Thioredoxin	PF00085	51 - 94	3e-06	Thioredoxin
Thioredoxin_8	PF13905	206 - 298	1.3e-24	Thioredoxin-like
Redoxin	PF08534	353 - 443	8.8e-06	Redoxin
AhpC-TSA	PF00578	354 - 445	4.2e-08	AhpC/TSA family
Thioredoxin_8	PF13905	366 - 458	3.7e-25	Thioredoxin-like
C1_2	PF03107	505 - 547	6.6e-09	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60420
malus_domestica	MD13G1093200.v1.1 MD16G1094200.v1.1 MD16G1094400.v1.1
prunus_persica	Prupe.1G171000_v2.0.a1 Prupe.1G171000_v2.0.a1 Prupe.1G171000_v2.0.a1 Prupe.1G252100_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1
pyrus_communis	pycom13g08120 pycom16g08020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	92
AccB1I	GGYRCC	5 cut(s)	38, 595, 739, 1131, 1670
AccBSI	CCGCTC	1 cut(s)	558
AccII	CGCG	6 cut(s)	299, 345, 351, 562, 564, 1640
AciI	CCGC	4 cut(s)	174, 261, 556, 1463
AclI	AACGTT	1 cut(s)	909
AclWI	GGATC	4 cut(s)	388, 534, 1047, 1069
AcoI	YGGCCR	1 cut(s)	1369
AcsI	RAATTY	4 cut(s)	668, 1045, 1322, 1466
AcyI	GRCGYC	1 cut(s)	39
AdeI	CACNNNGTG	1 cut(s)	902
AfaI	GTAC	7 cut(s)	293, 467, 653, 825, 842, 1549, 1729
AfiI	CCNNNNNNNGG	1 cut(s)	1179
AhdI	GACNNNNNGTC	1 cut(s)	277
AjnI	CCWGG	3 cut(s)	546, 1014, 1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1625, 1657
AloI	GAACNNNNNNTCC	2 cut(s)	347, 379
Alw21I	GWGCWC	4 cut(s)	852, 978, 1513, 1539
Alw26I	GTCTC	4 cut(s)	64, 607, 635, 1227
Alw44I	GTGCAC	1 cut(s)	1509
AlwI	GGATC	4 cut(s)	388, 534, 1047, 1069
AoxI	GGCC	4 cut(s)	210, 1188, 1369, 1490
ApaLI	GTGCAC	1 cut(s)	1509
ApeKI	GCWGC	2 cut(s)	23, 515
ApoI	RAATTY	4 cut(s)	668, 1045, 1322, 1466
ArsI	GACNNNNNNTTYG	4 cut(s)	1187, 1219, 1314, 1346
AsiSI	GCGATCGC	1 cut(s)	349
Asp700I	GAANNNNTTC	1 cut(s)	1307
AspLEI	GCGC	3 cut(s)	41, 564, 1640
AspS9I	GGNCC	4 cut(s)	176, 656, 1330, 1361
AsuC2I	CCSGG	2 cut(s)	1036, 1581
AsuHPI	GGTGA	8 cut(s)	119, 184, 248, 544, 914, 1304, 1426, 1730
AsuII	TTCGAA	1 cut(s)	285
AvaII	GGWCC	4 cut(s)	176, 656, 1330, 1361
BaeGI	GKGCMC	3 cut(s)	600, 1136, 1513
BalI	TGGCCA	1 cut(s)	1371
BanI	GGYRCC	5 cut(s)	38, 595, 739, 1131, 1670
BanII	GRGCYC	2 cut(s)	852, 978
BauI	CACGAG	1 cut(s)	1526
BbsI	GAAGAC	3 cut(s)	66, 276, 1692
Bbv12I	GWGCWC	4 cut(s)	852, 978, 1513, 1539
BbvI	GCAGC	2 cut(s)	10, 502
BccI	CCATC	9 cut(s)	393, 401, 578, 815, 881, 1058, 1471, 1559, 1698
BceAI	ACGGC	2 cut(s)	25, 1128
BciT130I	CCWGG	3 cut(s)	548, 1016, 1334
BciVI	GTATCC	1 cut(s)	372
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	2 cut(s)	1036, 1581
BcoDI	GTCTC	4 cut(s)	64, 607, 635, 1227
BfaI	CTAG	2 cut(s)	611, 1091
BfoI	RGCGCY	1 cut(s)	42
BfuI	GTATCC	1 cut(s)	372
BglII	AGATCT	1 cut(s)	1087
BisI	GCNGC	2 cut(s)	24, 516
BlsI	GCNGC	2 cut(s)	25, 517
Bme1390I	CCNGG	5 cut(s)	548, 1016, 1036, 1334, 1581
Bme18I	GGWCC	4 cut(s)	176, 656, 1330, 1361
BmeRI	GACNNNNNGTC	1 cut(s)	277
BmgT120I	GGNCC	4 cut(s)	176, 656, 1330, 1361
BmiI	GGNNCC	5 cut(s)	40, 597, 741, 1133, 1672
BmrFI	CCNGG	5 cut(s)	548, 1016, 1036, 1334, 1581
BmsI	GCATC	6 cut(s)	173, 294, 451, 907, 1189, 1347
BpiI	GAAGAC	3 cut(s)	66, 276, 1692
BpmI	CTGGAG	2 cut(s)	1037, 1207
Bpu14I	TTCGAA	1 cut(s)	285
BpuEI	CTTGAG	2 cut(s)	1282, 1333
BpuMI	CCSGG	2 cut(s)	1036, 1581
BsaBI	GATNNNNATC	1 cut(s)	1620
BsaHI	GRCGYC	1 cut(s)	39
BsaI	GGTCTC	2 cut(s)	635, 1227
BsaXI	ACNNNNNCTCC	2 cut(s)	579, 609
Bsc4I	CCNNNNNNNGG	1 cut(s)	1179
Bse1I	ACTGG	3 cut(s)	1133, 1224, 1372
Bse8I	GATNNNNATC	1 cut(s)	1620
BseBI	CCWGG	3 cut(s)	548, 1016, 1334
BseGI	GGATG	2 cut(s)	1338, 1709
BseJI	GATNNNNATC	1 cut(s)	1620
BseLI	CCNNNNNNNGG	1 cut(s)	1179
BseMII	CTCAG	3 cut(s)	1085, 1134, 1485
BseNI	ACTGG	3 cut(s)	1133, 1224, 1372
BseRI	GAGGAG	1 cut(s)	1487
BseSI	GKGCMC	3 cut(s)	600, 1136, 1513
BseXI	GCAGC	2 cut(s)	10, 502
BseYI	CCCAGC	1 cut(s)	196
Bsh1236I	CGCG	6 cut(s)	299, 345, 351, 562, 564, 1640
Bsh1285I	CGRYCG	1 cut(s)	349
BshFI	GGCC	4 cut(s)	212, 1190, 1371, 1492
BshNI	GGYRCC	5 cut(s)	38, 595, 739, 1131, 1670
BsiEI	CGRYCG	1 cut(s)	349
BsiHKAI	GWGCWC	4 cut(s)	852, 978, 1513, 1539
BsiSI	CCGG	2 cut(s)	1035, 1580
BslFI	GGGAC	2 cut(s)	98, 827
BslI	CCNNNNNNNGG	1 cut(s)	1179
BsmAI	GTCTC	4 cut(s)	64, 607, 635, 1227
BsmBI	CGTCTC	1 cut(s)	607
BsmFI	GGGAC	2 cut(s)	98, 827
BsnI	GGCC	4 cut(s)	212, 1190, 1371, 1492
Bso31I	GGTCTC	2 cut(s)	635, 1227
Bsp119I	TTCGAA	1 cut(s)	285
Bsp1286I	GDGCHC	6 cut(s)	600, 852, 978, 1136, 1513, 1539
Bsp1407I	TGTACA	2 cut(s)	823, 1727
Bsp143I	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
Bsp19I	CCATGG	3 cut(s)	308, 1177, 1271
Bsp68I	TCGCGA	1 cut(s)	299
BspACI	CCGC	4 cut(s)	174, 261, 556, 1463
BspANI	GGCC	4 cut(s)	212, 1190, 1371, 1492
BspCNI	CTCAG	3 cut(s)	1084, 1133, 1486
BspFNI	CGCG	6 cut(s)	299, 345, 351, 562, 564, 1640
BspHI	TCATGA	1 cut(s)	694
BspLI	GGNNCC	5 cut(s)	40, 597, 741, 1133, 1672
BspPI	GGATC	4 cut(s)	388, 534, 1047, 1069
BspQI	GCTCTTC	2 cut(s)	1287, 1434
BspT104I	TTCGAA	1 cut(s)	285
BspT107I	GGYRCC	5 cut(s)	38, 595, 739, 1131, 1670
BspTNI	GGTCTC	2 cut(s)	635, 1227
BsrBI	CCGCTC	1 cut(s)	558
BsrGI	TGTACA	2 cut(s)	823, 1727
BsrI	ACTGG	3 cut(s)	1133, 1224, 1372
BssMI	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
BssNI	GRCGYC	1 cut(s)	39
BssSI	CACGAG	1 cut(s)	1526
BssT1I	CCWWGG	7 cut(s)	308, 397, 791, 1177, 1191, 1237, 1271
Bst2BI	CACGAG	1 cut(s)	1526
Bst2UI	CCWGG	3 cut(s)	548, 1016, 1334
Bst4CI	ACNGT	5 cut(s)	428, 656, 868, 1378, 1718
Bst6I	CTCTTC	3 cut(s)	1287, 1434, 1499
BstACI	GRCGYC	1 cut(s)	39
BstAUI	TGTACA	2 cut(s)	823, 1727
BstBI	TTCGAA	1 cut(s)	285
BstC8I	GCNNGC	4 cut(s)	315, 343, 560, 1278
BstDEI	CTNAG	3 cut(s)	1071, 1120, 1494
BstDSI	CCRYGG	3 cut(s)	308, 1177, 1271
BstEII	GGTNACC	1 cut(s)	550
BstF5I	GGATG	2 cut(s)	1338, 1709
BstFNI	CGCG	6 cut(s)	299, 345, 351, 562, 564, 1640
BstH2I	RGCGCY	1 cut(s)	42
BstHHI	GCGC	3 cut(s)	41, 564, 1640
BstKTI	GATC	8 cut(s)	112, 349, 396, 529, 1042, 1077, 1090, 1624
BstMAI	GTCTC	4 cut(s)	64, 607, 635, 1227
BstMBI	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
BstMCI	CGRYCG	1 cut(s)	349
BstMWI	GCNNNNNNNGC	3 cut(s)	180, 1140, 1543
BstNI	CCWGG	3 cut(s)	548, 1016, 1334
BstPI	GGTNACC	1 cut(s)	550
BstSCI	CCNGG	5 cut(s)	546, 1014, 1034, 1332, 1579
BstSLI	GKGCMC	3 cut(s)	600, 1136, 1513
BstUI	CGCG	6 cut(s)	299, 345, 351, 562, 564, 1640
BstV1I	GCAGC	2 cut(s)	10, 502
BstV2I	GAAGAC	3 cut(s)	66, 276, 1692
BstX2I	RGATCY	2 cut(s)	1074, 1087
BstYI	RGATCY	2 cut(s)	1074, 1087
BsuI	GTATCC	1 cut(s)	372
BsuRI	GGCC	4 cut(s)	212, 1190, 1371, 1492
BtgI	CCRYGG	3 cut(s)	308, 1177, 1271
BtgZI	GCGATG	1 cut(s)	27
BtsCI	GGATG	2 cut(s)	1338, 1709
BtsIMutI	CAGTG	4 cut(s)	433, 873, 1126, 1231
BtuMI	TCGCGA	1 cut(s)	299
Cac8I	GCNNGC	4 cut(s)	315, 343, 560, 1278
CciI	TCATGA	1 cut(s)	694
CfoI	GCGC	3 cut(s)	41, 564, 1640
Cfr13I	GGNCC	4 cut(s)	176, 656, 1330, 1361
CseI	GACGC	1 cut(s)	1397
Csp6I	GTAC	7 cut(s)	292, 466, 652, 824, 841, 1548, 1728
CspCI	CAANNNNNGTGG	2 cut(s)	666, 701
CviQI	GTAC	7 cut(s)	292, 466, 652, 824, 841, 1548, 1728
DdeI	CTNAG	3 cut(s)	1071, 1120, 1494
DinI	GGCGCC	1 cut(s)	40
DpnI	GATC	8 cut(s)	111, 348, 395, 528, 1041, 1076, 1089, 1623
DpnII	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
DraIII	CACNNNGTG	1 cut(s)	902
DrdI	GACNNNNNNGTC	1 cut(s)	92
DriI	GACNNNNNGTC	1 cut(s)	277
DseDI	GACNNNNNNGTC	1 cut(s)	92
EaeI	YGGCCR	1 cut(s)	1369
Eam1104I	CTCTTC	3 cut(s)	1287, 1434, 1499
Eam1105I	GACNNNNNGTC	1 cut(s)	277
EarI	CTCTTC	3 cut(s)	1287, 1434, 1499
Ecl136II	GAGCTC	2 cut(s)	850, 976
Eco130I	CCWWGG	7 cut(s)	308, 397, 791, 1177, 1191, 1237, 1271
Eco147I	AGGCCT	1 cut(s)	212
Eco24I	GRGCYC	2 cut(s)	852, 978
Eco31I	GGTCTC	2 cut(s)	635, 1227
Eco47I	GGWCC	4 cut(s)	176, 656, 1330, 1361
Eco53kI	GAGCTC	2 cut(s)	850, 976
Eco91I	GGTNACC	1 cut(s)	550
EcoICRI	GAGCTC	2 cut(s)	850, 976
EcoO65I	GGTNACC	1 cut(s)	550
EcoRII	CCWGG	3 cut(s)	546, 1014, 1332
EcoT14I	CCWWGG	7 cut(s)	308, 397, 791, 1177, 1191, 1237, 1271
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	2 cut(s)	852, 978
EgeI	GGCGCC	1 cut(s)	40
EheI	GGCGCC	1 cut(s)	40
ErhI	CCWWGG	7 cut(s)	308, 397, 791, 1177, 1191, 1237, 1271
Esp3I	CGTCTC	1 cut(s)	607
FaqI	GGGAC	2 cut(s)	98, 827
FauI	CCCGC	1 cut(s)	563
FbaI	TGATCA	1 cut(s)	109
Fnu4HI	GCNGC	2 cut(s)	24, 516
FokI	GGATG	2 cut(s)	1325, 1716
FriOI	GRGCYC	2 cut(s)	852, 978
Fsp4HI	GCNGC	2 cut(s)	24, 516
FspBI	CTAG	2 cut(s)	611, 1091
GlaI	GCGC	3 cut(s)	40, 563, 1639
GluI	GCNGC	2 cut(s)	24, 516
GsaI	CCCAGC	1 cut(s)	200
GsuI	CTGGAG	2 cut(s)	1037, 1207
HaeII	RGCGCY	1 cut(s)	42
HaeIII	GGCC	4 cut(s)	212, 1190, 1371, 1492
HapII	CCGG	2 cut(s)	1035, 1580
HgaI	GACGC	1 cut(s)	1397
HhaI	GCGC	3 cut(s)	41, 564, 1640
Hin1I	GRCGYC	1 cut(s)	39
Hin6I	GCGC	3 cut(s)	39, 562, 1638
HinP1I	GCGC	3 cut(s)	39, 562, 1638
HindIII	AAGCTT	2 cut(s)	143, 1734
HinfI	GANTC	9 cut(s)	189, 278, 332, 761, 937, 1019, 1295, 1315, 1691
HpaII	CCGG	2 cut(s)	1035, 1580
HphI	GGTGA	8 cut(s)	119, 184, 248, 544, 914, 1304, 1426, 1730
Hpy166II	GTNNAC	3 cut(s)	355, 824, 1511
Hpy188I	TCNGA	7 cut(s)	7, 79, 114, 331, 337, 607, 1074
Hpy188III	TCNNGA	6 cut(s)	298, 446, 695, 727, 1312, 1540
Hpy8I	GTNNAC	3 cut(s)	355, 824, 1511
HpyAV	CCTTC	7 cut(s)	127, 281, 516, 586, 961, 1444, 1694
HpyCH4III	ACNGT	5 cut(s)	428, 656, 868, 1378, 1718
HpyCH4IV	ACGT	1 cut(s)	909
HpyCH4V	TGCA	7 cut(s)	164, 183, 317, 971, 1202, 1511, 1605
HpyF10VI	GCNNNNNNNGC	3 cut(s)	180, 1140, 1543
HpyF3I	CTNAG	3 cut(s)	1071, 1120, 1494
HpySE526I	ACGT	1 cut(s)	909
Hsp92I	GRCGYC	1 cut(s)	39
HspAI	GCGC	3 cut(s)	39, 562, 1638
KasI	GGCGCC	1 cut(s)	38
Ksp22I	TGATCA	1 cut(s)	109
Kzo9I	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
LguI	GCTCTTC	2 cut(s)	1287, 1434
LmnI	GCTCC	1 cut(s)	455
Lsp1109I	GCAGC	2 cut(s)	10, 502
LweI	GCATC	6 cut(s)	173, 294, 451, 907, 1189, 1347
MaeI	CTAG	2 cut(s)	611, 1091
MaeII	ACGT	1 cut(s)	909
MaeIII	GTNAC	8 cut(s)	98, 422, 550, 1081, 1226, 1292, 1378, 1712
MalI	GATC	8 cut(s)	111, 348, 395, 528, 1041, 1076, 1089, 1623
MbiI	CCGCTC	1 cut(s)	558
MboI	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
MflI	RGATCY	2 cut(s)	1074, 1087
MhlI	GDGCHC	6 cut(s)	600, 852, 978, 1136, 1513, 1539
MlsI	TGGCCA	1 cut(s)	1371
MluCI	AATT	6 cut(s)	573, 668, 1023, 1045, 1322, 1466
MluNI	TGGCCA	1 cut(s)	1371
Mly113I	GGCGCC	1 cut(s)	39
MlyI	GAGTC	6 cut(s)	287, 946, 1028, 1289, 1324, 1700
MmeI	TCCRAC	1 cut(s)	1623
Mox20I	TGGCCA	1 cut(s)	1371
Mph1103I	ATGCAT	1 cut(s)	1204
MroXI	GAANNNNTTC	1 cut(s)	1307
MscI	TGGCCA	1 cut(s)	1371
MseI	TTAA	4 cut(s)	18, 117, 1185, 1738
MslI	CAYNNNNRTG	2 cut(s)	169, 1343
Msp20I	TGGCCA	1 cut(s)	1371
MspA1I	CMGCKG	1 cut(s)	263
MspI	CCGG	2 cut(s)	1035, 1580
MspR9I	CCNGG	5 cut(s)	548, 1016, 1036, 1334, 1581
MvaI	CCWGG	3 cut(s)	548, 1016, 1334
MvnI	CGCG	6 cut(s)	299, 345, 351, 562, 564, 1640
MwoI	GCNNNNNNNGC	3 cut(s)	180, 1140, 1543
NarI	GGCGCC	1 cut(s)	39
NciI	CCSGG	2 cut(s)	1036, 1581
NcoI	CCATGG	3 cut(s)	308, 1177, 1271
NdeII	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
NlaIV	GGNNCC	5 cut(s)	40, 597, 741, 1133, 1672
NmeAIII	GCCGAG	1 cut(s)	52
NmuCI	GTSAC	7 cut(s)	422, 550, 1081, 1226, 1292, 1378, 1712
NruI	TCGCGA	1 cut(s)	299
NsiI	ATGCAT	1 cut(s)	1204
NspV	TTCGAA	1 cut(s)	285
PagI	TCATGA	1 cut(s)	694
PceI	AGGCCT	1 cut(s)	212
PciSI	GCTCTTC	2 cut(s)	1287, 1434
PcsI	WCGNNNNNNNCGW	2 cut(s)	68, 660
PdmI	GAANNNNTTC	1 cut(s)	1307
PfeI	GAWTC	3 cut(s)	189, 332, 761
PflFI	GACNNNGTC	1 cut(s)	56
PkrI	GCNGC	2 cut(s)	25, 517
Ple19I	CGATCG	1 cut(s)	349
PleI	GAGTC	6 cut(s)	286, 945, 1027, 1289, 1323, 1699
PluTI	GGCGCC	1 cut(s)	42
PpsI	GAGTC	6 cut(s)	286, 945, 1027, 1289, 1323, 1699
Psp124BI	GAGCTC	2 cut(s)	852, 978
Psp1406I	AACGTT	1 cut(s)	909
Psp6I	CCWGG	3 cut(s)	546, 1014, 1332
PspEI	GGTNACC	1 cut(s)	550
PspFI	CCCAGC	1 cut(s)	196
PspGI	CCWGG	3 cut(s)	546, 1014, 1332
PspN4I	GGNNCC	5 cut(s)	40, 597, 741, 1133, 1672
PspPI	GGNCC	4 cut(s)	176, 656, 1330, 1361
PsuI	RGATCY	2 cut(s)	1074, 1087
PsyI	GACNNNGTC	1 cut(s)	56
PvuI	CGATCG	1 cut(s)	349
RgaI	GCGATCGC	1 cut(s)	349
RruI	TCGCGA	1 cut(s)	299
RsaI	GTAC	7 cut(s)	293, 467, 653, 825, 842, 1549, 1729
RsaNI	GTAC	7 cut(s)	292, 466, 652, 824, 841, 1548, 1728
RseI	CAYNNNNRTG	2 cut(s)	169, 1343
SacI	GAGCTC	2 cut(s)	852, 978
SapI	GCTCTTC	2 cut(s)	1287, 1434
SaqAI	TTAA	4 cut(s)	18, 117, 1185, 1738
SatI	GCNGC	2 cut(s)	24, 516
Sau3AI	GATC	8 cut(s)	109, 346, 393, 526, 1039, 1074, 1087, 1621
Sau96I	GGNCC	4 cut(s)	176, 656, 1330, 1361
SchI	GAGTC	6 cut(s)	287, 946, 1028, 1289, 1324, 1700
ScrFI	CCNGG	5 cut(s)	548, 1016, 1036, 1334, 1581
SduI	GDGCHC	6 cut(s)	600, 852, 978, 1136, 1513, 1539
SfaAI	GCGATCGC	1 cut(s)	349
SfaNI	GCATC	6 cut(s)	173, 294, 451, 907, 1189, 1347
SfoI	GGCGCC	1 cut(s)	40
SfuI	TTCGAA	1 cut(s)	285
SgfI	GCGATCGC	1 cut(s)	349
SinI	GGWCC	4 cut(s)	176, 656, 1330, 1361
SmiMI	CAYNNNNRTG	2 cut(s)	169, 1343
SmlI	CTYRAG	2 cut(s)	1297, 1312
SmoI	CTYRAG	2 cut(s)	1297, 1312
Sse9I	AATT	6 cut(s)	573, 668, 1023, 1045, 1322, 1466
SseBI	AGGCCT	1 cut(s)	212
SsiI	CCGC	4 cut(s)	174, 261, 556, 1463
SspDI	GGCGCC	1 cut(s)	38
SspI	AATATT	1 cut(s)	776
SspMI	CTAG	2 cut(s)	611, 1091
SstI	GAGCTC	2 cut(s)	852, 978
StuI	AGGCCT	1 cut(s)	212
StyD4I	CCNGG	5 cut(s)	546, 1014, 1034, 1332, 1579
StyI	CCWWGG	7 cut(s)	308, 397, 791, 1177, 1191, 1237, 1271
TaaI	ACNGT	5 cut(s)	428, 656, 868, 1378, 1718
TaiI	ACGT	1 cut(s)	912
TaqI	TCGA	5 cut(s)	285, 726, 1042, 1541, 1620
TaqII	GACCGA	1 cut(s)	1349
TasI	AATT	6 cut(s)	573, 668, 1023, 1045, 1322, 1466
TatI	WGTACW	2 cut(s)	823, 1727
TfiI	GAWTC	3 cut(s)	189, 332, 761
Tru1I	TTAA	4 cut(s)	18, 117, 1185, 1738
Tru9I	TTAA	4 cut(s)	18, 117, 1185, 1738
TscAI	CASTG	4 cut(s)	433, 873, 1133, 1231
TseFI	GTSAC	7 cut(s)	422, 550, 1081, 1226, 1292, 1378, 1712
TseI	GCWGC	2 cut(s)	23, 515
Tsp45I	GTSAC	7 cut(s)	422, 550, 1081, 1226, 1292, 1378, 1712
TspDTI	ATGAA	5 cut(s)	234, 282, 519, 771, 1207
TspGWI	ACGGA	3 cut(s)	86, 312, 1676
TspRI	CASTG	4 cut(s)	433, 873, 1133, 1231
Tth111I	GACNNNGTC	1 cut(s)	56
VneI	GTGCAC	1 cut(s)	1509
VpaK11BI	GGWCC	4 cut(s)	176, 656, 1330, 1361
XapI	RAATTY	4 cut(s)	668, 1045, 1322, 1466
XmnI	GAANNNNTTC	1 cut(s)	1307
XspI	CTAG	2 cut(s)	611, 1091
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.