Prupe.1G171000_v2.0.a1

Nucleoredoxin

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
14216242 .. 14220083
3842 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G171000.3

Sequence Viewer

Length: 1743 bp
ATGTCCGATAGTAAACAAAACGTCGCTGAGCTGGTCAACAGCGAACCCCACGACTTTCGCTCGCTGCTTTCTTCTTCCGAGAGGGACTTTCTTGTCGGCAACAATGGTGATCAGATTAAAGTTGAAAGCTTGAAAGGGAAAAAGCTTGGGTTGTACTTTTCTGCATCATGGTGCGGTCCATGTCGACGGTTCACCCCTTCTTTAGTGGAGGTCTACAATGAACTTTCTCCCAAAGGTGATTTTGAGGTTGTATTTATCTCAGCTGATGAAGATGATGAGTCATTCAATGGGTACTTCTCCAAGATGCCGTGGCTTGCAATTCCGTTTTCTGATTCAGAGGCACGTGATCGCGTGGATAAACTGTTCAAGGTCAGAGGGATACCCCATCTTGTGATCCTTGATGAAGATGGCAAAGTTTTGAGTGACAGTGGAGTTGAGATTATTCAGGAGCATGGAGTAGACGGCTACCCTTTTACACCAGAAAAGATAAAAGAACTAAATGATCAAGAAGAAGCAGCCAGAAGGGATCAGTCCTTGAAAACGATCTTGGTCTCTCGCTTACGTGACTTTGTAATTTCAAATGACGGAAAGAATGTGCCTGTCTCTGAACTTGAAGGGAAGATCGTGGGTCTCTATTTTTCGTTGTCTGCATACAGTCCATGTGTTGACTTTACTCCAAAACTTTTGGAGGTTTATGAGAAGCTAAAAGCAAATGGAGAGAGCTTTGAGGTTGTGGTAATACCACTTGATGATGATGAAGAATCATTCAAGCAAGATTTTAAGAACATGCCTTGGTTTTCTTTGCCCATCGGGGACAAAAATGTTGGGAAGTTGGCTCGATACTTTGAGCTTTCAACCTTACCCACTTTGGTTATTATTGGGGCAGATGGTAAAACTGTTAGTAAGAACGTTGCTGAGGCCATTGAAGAGCATGGGGTTCTGGCTTACCCCTTCACCCCAGAGAAATTTGAAGAGCTCATTGAGATAGAAAAGGCAAAGGAGAAAGCTCAAACCCTGGAGTCAATTTTGATATCTGGGGATCGAAACTTTGTCATTGGAAAAGGTGGAACTGAGATTCCTGTGTCAGATCTGGTAGGGAAGAACATCCTCCTTTATTTCTCAGCTCATTGGTGCCCTCCATGCCGTGCCTTTCTACCAAAACTTCTTGAAGCCTACCACAAGATTAAGGCAAAGGATGATGCATTTGAAGTTATTTTCATCTCTAGTGACAGAGACCAAGACGCTTTTGATGAGTTTTTCTCTGGAATGCCATGGCTTGCTCTTCCCTTTGGTGACTCAAGAAAAGCATGCTTAAGCCGCAGATTCAAGGTGCAAGGCATCCCCATGCTTATAGCCATTGGTCCTACTGGCCAAACAGTCACAAAAGAAGCCAGACACCTCGTTATGCAGCATGGGGCAAATGCTTATCCTTTCACTGAAGAGCGGCTGAAAGAGATAGAAGCAGAGTTTGAGGAGATGGCAAAGGGGTGGCCTGAGAAGTTGAAGAGTGCACAGCATGAGGAGCATGAGCTCGTGCTTGCTCGCCGTAAAGATTATGTATGTGATGGGTGCGATGAGCCAGGAGAAGAGGGGTGGTCATTCTACTGTGAGGCGTGTGACTTTGATCTCCACCCAAAATGTGCATTAGAGGAAGATAAAGGAACCAAAAGTGATGCCAAGCAGGAACAAGATCCTCCTCAAGAAGAATGGGCGTGCGATGGTGATGTGTGTAAAAAAGCTTAA

Protein Analysis

581

Amino Acids

65.3

Weight (kDa)

4.8

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 92
AccB1I GGYRCC 1 cut(s) 1131
AccBSI CCGCTC 1 cut(s) 1444
AccI GTMKAC 3 cut(s) 184, 213, 459
AccII CGCG 1 cut(s) 351
AciI CCGC 3 cut(s) 174, 1318, 1444
AclI AACGTT 1 cut(s) 909
AclWI GGATC 4 cut(s) 388, 534, 1047, 1685
AcoI YGGCCR 1 cut(s) 1369
AcsI RAATTY 1 cut(s) 965
AcuI CTGAAG 1 cut(s) 1458
AcvI CACGTG 1 cut(s) 344
AfaI GTAC 2 cut(s) 155, 293
AflII CTTAAG 1 cut(s) 1312
AjnI CCWGG 2 cut(s) 1014, 1579
AjuI GAANNNNNNNTTGG 2 cut(s) 530, 562
AloI GAACNNNNNNTCC 4 cut(s) 347, 379, 1060, 1092
Alw21I GWGCWC 3 cut(s) 978, 1513, 1533
Alw26I GTCTC 4 cut(s) 556, 607, 635, 1227
Alw44I GTGCAC 1 cut(s) 1509
AlwI GGATC 4 cut(s) 388, 534, 1047, 1685
AoxI GGCC 3 cut(s) 918, 1369, 1490
ApaLI GTGCAC 1 cut(s) 1509
ApeKI GCWGC 3 cut(s) 64, 515, 1408
ApoI RAATTY 1 cut(s) 965
AspS9I GGNCC 2 cut(s) 176, 1361
AsuHPI GGTGA 6 cut(s) 119, 184, 248, 946, 1304, 1733
AvaII GGWCC 2 cut(s) 176, 1361
BaeGI GKGCMC 2 cut(s) 1136, 1513
BalI TGGCCA 1 cut(s) 1371
BanI GGYRCC 1 cut(s) 1131
BanII GRGCYC 2 cut(s) 978, 1533
BauI CACGAG 1 cut(s) 1532
BbrPI CACGTG 1 cut(s) 344
Bbv12I GWGCWC 3 cut(s) 978, 1513, 1533
BbvCI CCTCAGC 1 cut(s) 915
BbvI GCAGC 3 cut(s) 51, 527, 1420
BccI CCATC 7 cut(s) 393, 401, 815, 881, 1471, 1559, 1712
BceAI ACGGC 4 cut(s) 292, 478, 1128, 1530
BciT130I CCWGG 2 cut(s) 1016, 1581
BciVI GTATCC 1 cut(s) 372
BclI TGATCA 2 cut(s) 109, 502
BcoDI GTCTC 4 cut(s) 556, 607, 635, 1227
BfaI CTAG 1 cut(s) 1224
BfrI CTTAAG 1 cut(s) 1312
BfuI GTATCC 1 cut(s) 372
BglII AGATCT 1 cut(s) 1087
BisI GCNGC 5 cut(s) 65, 516, 1318, 1409, 1445
BlpI GCTNAGC 1 cut(s) 27
BlsI GCNGC 5 cut(s) 66, 517, 1319, 1410, 1446
Bme1390I CCNGG 2 cut(s) 1016, 1581
Bme18I GGWCC 2 cut(s) 176, 1361
BmgT120I GGNCC 2 cut(s) 176, 1361
BmiI GGNNCC 2 cut(s) 1133, 1663
BmrFI CCNGG 2 cut(s) 1016, 1581
BmsI GCATC 5 cut(s) 173, 294, 1189, 1347, 1663
BplI GAGNNNNNCTC 2 cut(s) 1244, 1276
BpmI CTGGAG 1 cut(s) 1037
Bpu10I CCTNAGC 1 cut(s) 915
Bpu1102I GCTNAGC 1 cut(s) 27
BpuEI CTTGAG 2 cut(s) 1282, 1683
BsaAI YACGTR 2 cut(s) 344, 563
BsaI GGTCTC 3 cut(s) 556, 635, 1227
BsaJI CCNNGG 4 cut(s) 308, 791, 1014, 1271
Bse1I ACTGG 1 cut(s) 1372
BseBI CCWGG 2 cut(s) 1016, 1581
BseDI CCNNGG 4 cut(s) 308, 791, 1014, 1271
BseGI GGATG 3 cut(s) 1104, 1201, 1338
BseMII CTCAG 6 cut(s) 18, 273, 906, 1062, 1134, 1485
BseNI ACTGG 1 cut(s) 1372
BseRI GAGGAG 3 cut(s) 1487, 1535, 1686
BseSI GKGCMC 2 cut(s) 1136, 1513
BseXI GCAGC 3 cut(s) 51, 527, 1420
Bsh1236I CGCG 1 cut(s) 351
BshFI GGCC 3 cut(s) 920, 1371, 1492
BshNI GGYRCC 1 cut(s) 1131
BsiHKAI GWGCWC 3 cut(s) 978, 1513, 1533
BslFI GGGAC 2 cut(s) 98, 827
BsmAI GTCTC 4 cut(s) 556, 607, 635, 1227
BsmFI GGGAC 2 cut(s) 98, 827
BsmI GAATGC 1 cut(s) 1272
BsnI GGCC 3 cut(s) 920, 1371, 1492
Bso31I GGTCTC 3 cut(s) 556, 635, 1227
Bsp1286I GDGCHC 4 cut(s) 978, 1136, 1513, 1533
Bsp1720I GCTNAGC 1 cut(s) 27
Bsp19I CCATGG 1 cut(s) 1271
BspACI CCGC 3 cut(s) 174, 1318, 1444
BspANI GGCC 3 cut(s) 920, 1371, 1492
BspCNI CTCAG 6 cut(s) 19, 272, 907, 1063, 1133, 1486
BspFNI CGCG 1 cut(s) 351
BspLI GGNNCC 2 cut(s) 1133, 1663
BspPI GGATC 4 cut(s) 388, 534, 1047, 1685
BspQI GCTCTTC 4 cut(s) 921, 966, 1287, 1434
BspT107I GGYRCC 1 cut(s) 1131
BspTI CTTAAG 1 cut(s) 1312
BspTNI GGTCTC 3 cut(s) 556, 635, 1227
BsrBI CCGCTC 1 cut(s) 1444
BsrI ACTGG 1 cut(s) 1372
BssECI CCNNGG 4 cut(s) 308, 791, 1014, 1271
BssSI CACGAG 1 cut(s) 1532
BssT1I CCWWGG 2 cut(s) 791, 1271
Bst2BI CACGAG 1 cut(s) 1532
Bst2UI CCWGG 2 cut(s) 1016, 1581
Bst4CI ACNGT 7 cut(s) 189, 363, 428, 656, 898, 1378, 1607
Bst6I CTCTTC 6 cut(s) 921, 966, 1287, 1434, 1499, 1581
BstAFI CTTAAG 1 cut(s) 1312
BstBAI YACGTR 2 cut(s) 344, 563
BstC8I GCNNGC 7 cut(s) 62, 315, 1278, 1309, 1539, 1543, 1714
BstDEI CTNAG 6 cut(s) 27, 259, 915, 1071, 1120, 1494
BstDSI CCRYGG 2 cut(s) 308, 1271
BstF5I GGATG 3 cut(s) 1104, 1201, 1338
BstFNI CGCG 1 cut(s) 351
BstMAI GTCTC 4 cut(s) 556, 607, 635, 1227
BstMWI GCNNNNNNNGC 3 cut(s) 1140, 1317, 1522
BstNI CCWGG 2 cut(s) 1016, 1581
BstNSI RCATGY 2 cut(s) 790, 1311
BstSCI CCNGG 2 cut(s) 1014, 1579
BstSLI GKGCMC 2 cut(s) 1136, 1513
BstUI CGCG 1 cut(s) 351
BstV1I GCAGC 3 cut(s) 51, 527, 1420
BstX2I RGATCY 2 cut(s) 1087, 1690
BstYI RGATCY 2 cut(s) 1087, 1690
BsuI GTATCC 1 cut(s) 372
BsuRI GGCC 3 cut(s) 920, 1371, 1492
BtgI CCRYGG 2 cut(s) 308, 1271
BtgZI GCGATG 2 cut(s) 1587, 1731
BtsCI GGATG 3 cut(s) 1104, 1201, 1338
BtsIMutI CAGTG 2 cut(s) 433, 1434
Cac8I GCNNGC 7 cut(s) 62, 315, 1278, 1309, 1539, 1543, 1714
Cfr13I GGNCC 2 cut(s) 176, 1361
CseI GACGC 1 cut(s) 1250
Csp6I GTAC 2 cut(s) 154, 292
CviQI GTAC 2 cut(s) 154, 292
DdeI CTNAG 6 cut(s) 27, 259, 915, 1071, 1120, 1494
DrdI GACNNNNNNGTC 1 cut(s) 92
DseDI GACNNNNNNGTC 1 cut(s) 92
EaeI YGGCCR 1 cut(s) 1369
Eam1104I CTCTTC 6 cut(s) 921, 966, 1287, 1434, 1499, 1581
EarI CTCTTC 6 cut(s) 921, 966, 1287, 1434, 1499, 1581
Ecl136II GAGCTC 2 cut(s) 976, 1531
Eco130I CCWWGG 2 cut(s) 791, 1271
Eco24I GRGCYC 2 cut(s) 978, 1533
Eco31I GGTCTC 3 cut(s) 556, 635, 1227
Eco32I GATATC 1 cut(s) 1032
Eco47I GGWCC 2 cut(s) 176, 1361
Eco53kI GAGCTC 2 cut(s) 976, 1531
Eco57I CTGAAG 1 cut(s) 1458
Eco72I CACGTG 1 cut(s) 344
EcoICRI GAGCTC 2 cut(s) 976, 1531
EcoRII CCWGG 2 cut(s) 1014, 1579
EcoRV GATATC 1 cut(s) 1032
EcoT14I CCWWGG 2 cut(s) 791, 1271
EcoT22I ATGCAT 1 cut(s) 1204
EcoT38I GRGCYC 2 cut(s) 978, 1533
ErhI CCWWGG 2 cut(s) 791, 1271
FaqI GGGAC 2 cut(s) 98, 827
FbaI TGATCA 2 cut(s) 109, 502
FblI GTMKAC 3 cut(s) 184, 213, 459
Fnu4HI GCNGC 5 cut(s) 65, 516, 1318, 1409, 1445
FokI GGATG 3 cut(s) 1091, 1208, 1325
FriOI GRGCYC 2 cut(s) 978, 1533
Fsp4HI GCNGC 5 cut(s) 65, 516, 1318, 1409, 1445
FspBI CTAG 1 cut(s) 1224
GluI GCNGC 5 cut(s) 65, 516, 1318, 1409, 1445
GsuI CTGGAG 1 cut(s) 1037
HaeIII GGCC 3 cut(s) 920, 1371, 1492
HgaI GACGC 1 cut(s) 1250
HincII GTYRAC 3 cut(s) 37, 185, 667
HindII GTYRAC 3 cut(s) 37, 185, 667
HindIII AAGCTT 3 cut(s) 127, 143, 1737
HinfI GANTC 7 cut(s) 278, 332, 761, 1019, 1075, 1295, 1323
HphI GGTGA 6 cut(s) 119, 184, 248, 946, 1304, 1733
Hpy166II GTNNAC 8 cut(s) 14, 37, 185, 192, 214, 460, 667, 1511
Hpy188I TCNGA 8 cut(s) 7, 79, 114, 331, 337, 374, 607, 1087
Hpy188III TCNNGA 6 cut(s) 446, 506, 1166, 1263, 1299, 1700
Hpy8I GTNNAC 8 cut(s) 14, 37, 185, 192, 214, 460, 667, 1511
Hpy99I CGWCG 2 cut(s) 26, 189
HpyAV CCTTC 4 cut(s) 207, 516, 608, 961
HpyCH4III ACNGT 7 cut(s) 189, 363, 428, 656, 898, 1378, 1607
HpyCH4IV ACGT 4 cut(s) 21, 343, 562, 909
HpyCH4V TGCA 8 cut(s) 164, 317, 650, 1202, 1333, 1408, 1511, 1643
HpyF10VI GCNNNNNNNGC 3 cut(s) 1140, 1317, 1522
HpyF3I CTNAG 6 cut(s) 27, 259, 915, 1071, 1120, 1494
HpySE526I ACGT 4 cut(s) 21, 343, 562, 909
Ksp22I TGATCA 2 cut(s) 109, 502
LguI GCTCTTC 4 cut(s) 921, 966, 1287, 1434
LmnI GCTCC 2 cut(s) 448, 1522
Lsp1109I GCAGC 3 cut(s) 51, 527, 1420
LweI GCATC 5 cut(s) 173, 294, 1189, 1347, 1663
MaeI CTAG 1 cut(s) 1224
MaeII ACGT 4 cut(s) 21, 343, 562, 909
MaeIII GTNAC 6 cut(s) 422, 563, 1226, 1292, 1378, 1616
MbiI CCGCTC 1 cut(s) 1444
MflI RGATCY 2 cut(s) 1087, 1690
MhlI GDGCHC 4 cut(s) 978, 1136, 1513, 1533
MlsI TGGCCA 1 cut(s) 1371
MluCI AATT 4 cut(s) 318, 573, 965, 1023
MluNI TGGCCA 1 cut(s) 1371
MlyI GAGTC 3 cut(s) 287, 1028, 1289
Mox20I TGGCCA 1 cut(s) 1371
Mph1103I ATGCAT 1 cut(s) 1204
MscI TGGCCA 1 cut(s) 1371
MseI TTAA 5 cut(s) 117, 780, 1185, 1313, 1741
MslI CAYNNNNRTG 2 cut(s) 169, 1343
Msp20I TGGCCA 1 cut(s) 1371
MspA1I CMGCKG 1 cut(s) 263
MspCI CTTAAG 1 cut(s) 1312
MspR9I CCNGG 2 cut(s) 1016, 1581
Mva1269I GAATGC 1 cut(s) 1272
MvaI CCWGG 2 cut(s) 1016, 1581
MvnI CGCG 1 cut(s) 351
MwoI GCNNNNNNNGC 3 cut(s) 1140, 1317, 1522
NcoI CCATGG 1 cut(s) 1271
NlaIV GGNNCC 2 cut(s) 1133, 1663
NmuCI GTSAC 6 cut(s) 422, 563, 1226, 1292, 1378, 1616
NsiI ATGCAT 1 cut(s) 1204
NspI RCATGY 2 cut(s) 790, 1311
PaeI GCATGC 1 cut(s) 1311
PciSI GCTCTTC 4 cut(s) 921, 966, 1287, 1434
PctI GAATGC 1 cut(s) 1272
PfeI GAWTC 4 cut(s) 332, 761, 1075, 1323
PkrI GCNGC 5 cut(s) 66, 517, 1319, 1410, 1446
PleI GAGTC 3 cut(s) 286, 1027, 1289
PmaCI CACGTG 1 cut(s) 344
PmlI CACGTG 1 cut(s) 344
PpsI GAGTC 3 cut(s) 286, 1027, 1289
Ppu21I YACGTR 2 cut(s) 344, 563
Psp124BI GAGCTC 2 cut(s) 978, 1533
Psp1406I AACGTT 1 cut(s) 909
Psp6I CCWGG 2 cut(s) 1014, 1579
PspCI CACGTG 1 cut(s) 344
PspGI CCWGG 2 cut(s) 1014, 1579
PspN4I GGNNCC 2 cut(s) 1133, 1663
PspPI GGNCC 2 cut(s) 176, 1361
PsuI RGATCY 2 cut(s) 1087, 1690
PvuII CAGCTG 1 cut(s) 263
RsaI GTAC 2 cut(s) 155, 293
RsaNI GTAC 2 cut(s) 154, 292
RseI CAYNNNNRTG 2 cut(s) 169, 1343
SacI GAGCTC 2 cut(s) 978, 1533
SalI GTCGAC 1 cut(s) 183
SapI GCTCTTC 4 cut(s) 921, 966, 1287, 1434
SaqAI TTAA 5 cut(s) 117, 780, 1185, 1313, 1741
SatI GCNGC 5 cut(s) 65, 516, 1318, 1409, 1445
Sau96I GGNCC 2 cut(s) 176, 1361
SchI GAGTC 3 cut(s) 287, 1028, 1289
ScrFI CCNGG 2 cut(s) 1016, 1581
SduI GDGCHC 4 cut(s) 978, 1136, 1513, 1533
SfaNI GCATC 5 cut(s) 173, 294, 1189, 1347, 1663
SinI GGWCC 2 cut(s) 176, 1361
SmiMI CAYNNNNRTG 2 cut(s) 169, 1343
SmlI CTYRAG 3 cut(s) 1297, 1312, 1698
SmoI CTYRAG 3 cut(s) 1297, 1312, 1698
SphI GCATGC 1 cut(s) 1311
Sse9I AATT 4 cut(s) 318, 573, 965, 1023
SsiI CCGC 3 cut(s) 174, 1318, 1444
SspMI CTAG 1 cut(s) 1224
SstI GAGCTC 2 cut(s) 978, 1533
StyD4I CCNGG 2 cut(s) 1014, 1579
StyI CCWWGG 2 cut(s) 791, 1271
TaaI ACNGT 7 cut(s) 189, 363, 428, 656, 898, 1378, 1607
TaiI ACGT 4 cut(s) 24, 346, 565, 912
TaqI TCGA 3 cut(s) 184, 838, 1042
TasI AATT 4 cut(s) 318, 573, 965, 1023
TatI WGTACW 1 cut(s) 153
TauI GCSGC 2 cut(s) 1320, 1447
TfiI GAWTC 4 cut(s) 332, 761, 1075, 1323
Tru1I TTAA 5 cut(s) 117, 780, 1185, 1313, 1741
Tru9I TTAA 5 cut(s) 117, 780, 1185, 1313, 1741
TscAI CASTG 2 cut(s) 433, 1441
TseFI GTSAC 6 cut(s) 422, 563, 1226, 1292, 1378, 1616
TseI GCWGC 3 cut(s) 64, 515, 1408
Tsp45I GTSAC 6 cut(s) 422, 563, 1226, 1292, 1378, 1616
TspDTI ATGAA 5 cut(s) 234, 282, 417, 771, 1207
TspGWI ACGGA 2 cut(s) 312, 600
TspRI CASTG 2 cut(s) 433, 1441
Vha464I CTTAAG 1 cut(s) 1312
VneI GTGCAC 1 cut(s) 1509
VpaK11BI GGWCC 2 cut(s) 176, 1361
XapI RAATTY 1 cut(s) 965
XceI RCATGY 2 cut(s) 790, 1311
XmiI GTMKAC 3 cut(s) 184, 213, 459
XspI CTAG 1 cut(s) 1224
Zsp2I ATGCAT 1 cut(s) 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.