Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0016491

Physical Location & Seq

Genomic Coordinates Forward (+)

6508747 .. 6513391

Gene Structure 4645 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1094200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGTCCGACGGCGAAGTTAAAGCTGCCAAGCTGGTCGGCTCCGAACCCCACGACGTTGTCTCGCTTCTTTCGGCTTCCGAGAGGAACTTTCTTGTCCGTAACAATGGTGATCAGATTAAGGTTGAGAGCTTGAAGGGGAAAAAGCTTGGGCTGTATTTTTCTGCATCATGGTGCAGTACATGCGAACGATTCACCCAAGCTTTAGTTGAGGCCTACAATGAACTCTCTCCAAAAGGTGATTTTGAGATTGTATTTATCTCCGCTGATGAAGACGATGAGTCATTCAAAGGGTACTTCGCGGAGATGCCATGGCTTGCAATCCCGTTCTCTGATTCAAAAGCACGCAGTCGTGTGGATGAGTTGTTCAAAGTTAGAGAGATACCCCATCTTGTGACCCTTGGCGAAGATGGTAAAGTTTTGAGTGACAGTGGAGTTTGGATTATTCGGAAGTACGGAGCTGATGCGTACCCTTTTACGCTGGAAAAGTTGAAAGAGCTGAAAGATGAAGAAGAAGCTGCCAGAAGGGATCAGTCCTTGAAAACTATCCTGGTCACCCGATCGCGCGACTTTGTAATTTCAAATGATGGGGAGAAGGTGCCTGTTTCTGAACTAGAAGGGAAGATAGTGGGTCTCTATTTCTCATTGTTTTCGCGCGGTGCGTGCGTAGAATTTACTCCGAAACTTGTGGAGGCTCATGAGAAGCTCAAAGCAAATGGAGAGAACTTCGAGATTGTTTTGGTGCCACTTGATGATGATGAAGAATCATTCAAGCAATATTTTGAGAAAATGCCTTGGTTTTCTTTACCCATTGGGGACAAAAGTGTAAAGAAGTTGGCTCGGTACTTTGAGCACTCAACTTTGCCCACAGTGGTTATTATTGGGGCAGATGGTAAAACACTTAGTGAGAACGTTGCTGATGCCATTGACGAGCATGGGAGTCTGGCTTACCCCTTCACACCAGAGAAGTTTGCAGAGCTCGTTGAGATAGAAAAGGCAAAGGAGAAAGCTCAAACCCTGGAGTCAATTTTGATTTCCGGGGATCGAAATTTTGTCATTGGAAAAGATGGAACTCAGATCCCTGTGACAGATCTAGTGGGGAAGAACATTCTCCTGTACTTCTCAGCTCACCGCTCCCGTGCATGCCGTGCCTTTCTGCCAAAACTTGTTGAAGCCTACCACGAGATTAAGGCCAAGGACGATGCATTTGAAGTCATTTTCATCTCCAGTGACAAAGGCCAAAACGCATTTGATAAGGTTTTCGCCACAATGCCATGGCTTGCTCTTCCCTTTGGTGACTCAAGGAAAGCGTTCTTGATAAGCAAATTCAAGGTCCTGTTCATCCCCAAGCTCATAGCAATCGGTCCTACCGGCCAAACCGTCACAAAAGAAGCAAGAAATCTCATCAAGGATCATGGGGCAAATGCTTATCCTTTCACCGAAGAGCGAATGAAGGAGATTAAAGCGGAATTTGAGATGGCAAGGGGGTGGCCTGAGAAGTTGAAGAGTGCACTTCATGAGAAGCACGAGCTTGTGCTCTCGAAGCGTACAGCTTTTGTGTGTGATGGGTGCGGAAAACCGGGAGTGGTGTGGTCATTCTACTGTAAGGAGTGTGATTTCAATCTCCACCCGAAGTGCGCGCTGGAGGGAGACAAAAAGATCGAAAATGGTGCCAAGCAGGCAGAGGAAGAAGAGTGTAGACGTAAATTTATTCCTCCTCCTTCTTGGTTAAAATTACACCGACAAAACAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

584

Amino Acids

65.73

Weight (kDa)

5.82

Isoelectric Point (pI)

34.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AhpC-TSA	PF00578	34 - 96	5.7e-06	AhpC/TSA family
Thioredoxin_8	PF13905	46 - 139	4.4e-23	Thioredoxin-like
Thioredoxin_8	PF13905	206 - 298	2.9e-22	Thioredoxin-like
Thioredoxin_8	PF13905	366 - 458	1.5e-20	Thioredoxin-like
C1_2	PF03107	504 - 546	3.5e-09	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60420
malus_domestica	MD13G1093200.v1.1 MD16G1094200.v1.1 MD16G1094400.v1.1
prunus_persica	Prupe.1G171000_v2.0.a1 Prupe.1G171000_v2.0.a1 Prupe.1G171000_v2.0.a1 Prupe.1G252100_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1 Prupe.1G252200_v2.0.a1
pyrus_communis	pycom13g08120 pycom16g08020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	595, 739, 1667
AccBSI	CCGCTC	1 cut(s)	1131
AccI	GTMKAC	1 cut(s)	1696
AccII	CGCG	6 cut(s)	299, 562, 564, 652, 654, 1637
AciI	CCGC	6 cut(s)	261, 299, 654, 1129, 1463, 1569
AclI	AACGTT	1 cut(s)	909
AclWI	GGATC	4 cut(s)	534, 1047, 1069, 1416
AcoI	YGGCCR	1 cut(s)	1369
AcsI	RAATTY	5 cut(s)	668, 1045, 1322, 1466, 1703
AdeI	CACNNNGTG	1 cut(s)	902
AfaI	GTAC	7 cut(s)	178, 293, 452, 467, 842, 1115, 1546
AhdI	GACNNNNNGTC	1 cut(s)	277
AjnI	CCWGG	2 cut(s)	546, 1014
AloI	GAACNNNNNNTCC	2 cut(s)	347, 379
Alw21I	GWGCWC	4 cut(s)	852, 978, 1510, 1536
Alw26I	GTCTC	3 cut(s)	64, 635, 1641
Alw44I	GTGCAC	1 cut(s)	1506
AlwI	GGATC	4 cut(s)	534, 1047, 1069, 1416
AoxI	GGCC	5 cut(s)	210, 1188, 1234, 1369, 1487
ApaLI	GTGCAC	1 cut(s)	1506
ApeKI	GCWGC	2 cut(s)	23, 515
ApoI	RAATTY	5 cut(s)	668, 1045, 1322, 1466, 1703
ArsI	GACNNNNNNTTYG	4 cut(s)	1187, 1219, 1314, 1346
Asp700I	GAANNNNTTC	1 cut(s)	1307
AspLEI	GCGC	4 cut(s)	564, 654, 1637, 1639
AspS9I	GGNCC	2 cut(s)	1330, 1361
AsuC2I	CCSGG	2 cut(s)	1036, 1578
AsuHPI	GGTGA	7 cut(s)	119, 184, 248, 544, 1118, 1304, 1426
AvaII	GGWCC	2 cut(s)	1330, 1361
BaeGI	GKGCMC	1 cut(s)	1510
BanI	GGYRCC	3 cut(s)	595, 739, 1667
BanII	GRGCYC	1 cut(s)	978
BauI	CACGAG	2 cut(s)	1178, 1523
BbsI	GAAGAC	1 cut(s)	276
Bbv12I	GWGCWC	4 cut(s)	852, 978, 1510, 1536
BbvI	GCAGC	2 cut(s)	10, 502
BccI	CCATC	7 cut(s)	393, 401, 578, 881, 1058, 1468, 1556
BceAI	ACGGC	2 cut(s)	25, 1128
BcgI	CGANNNNNNTGC	2 cut(s)	1649, 1683
BciT130I	CCWGG	2 cut(s)	548, 1016
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	2 cut(s)	1036, 1578
BcoDI	GTCTC	3 cut(s)	64, 635, 1641
BfaI	CTAG	2 cut(s)	611, 1091
BglI	GCCNNNNNGGC	1 cut(s)	1676
BglII	AGATCT	1 cut(s)	1087
BisI	GCNGC	2 cut(s)	24, 516
BlsI	GCNGC	2 cut(s)	25, 517
Bme1390I	CCNGG	4 cut(s)	548, 1016, 1036, 1578
Bme18I	GGWCC	2 cut(s)	1330, 1361
BmeRI	GACNNNNNGTC	1 cut(s)	277
BmgT120I	GGNCC	2 cut(s)	1330, 1361
BmiI	GGNNCC	4 cut(s)	40, 597, 741, 1669
BmrFI	CCNGG	4 cut(s)	548, 1016, 1036, 1578
BmsI	GCATC	5 cut(s)	173, 294, 451, 907, 1189
BpiI	GAAGAC	1 cut(s)	276
BpmI	CTGGAG	3 cut(s)	1037, 1207, 1661
BpuEI	CTTGAG	1 cut(s)	1282
BpuMI	CCSGG	2 cut(s)	1036, 1578
BsaBI	GATNNNNATC	1 cut(s)	1617
BsaI	GGTCTC	1 cut(s)	635
BsaJI	CCNNGG	7 cut(s)	308, 397, 791, 1014, 1035, 1191, 1271
Bse118I	RCCGGY	1 cut(s)	1367
Bse1I	ACTGG	1 cut(s)	1224
Bse8I	GATNNNNATC	1 cut(s)	1617
BseBI	CCWGG	2 cut(s)	548, 1016
BseDI	CCNNGG	7 cut(s)	308, 397, 791, 1014, 1035, 1191, 1271
BseGI	GGATG	2 cut(s)	361, 1338
BseJI	GATNNNNATC	1 cut(s)	1617
BseMII	CTCAG	3 cut(s)	1085, 1134, 1482
BseNI	ACTGG	1 cut(s)	1224
BsePI	GCGCGC	1 cut(s)	1635
BseRI	GAGGAG	1 cut(s)	1704
BseSI	GKGCMC	1 cut(s)	1510
BseXI	GCAGC	2 cut(s)	10, 502
BsgI	GTGCAG	1 cut(s)	193
Bsh1236I	CGCG	6 cut(s)	299, 562, 564, 652, 654, 1637
Bsh1285I	CGRYCG	1 cut(s)	560
BshFI	GGCC	5 cut(s)	212, 1190, 1236, 1371, 1489
BshNI	GGYRCC	3 cut(s)	595, 739, 1667
BsiEI	CGRYCG	1 cut(s)	560
BsiHKAI	GWGCWC	4 cut(s)	852, 978, 1510, 1536
BsiSI	CCGG	3 cut(s)	1035, 1368, 1577
BslFI	GGGAC	1 cut(s)	827
BsmAI	GTCTC	3 cut(s)	64, 635, 1641
BsmFI	GGGAC	1 cut(s)	827
BsnI	GGCC	5 cut(s)	212, 1190, 1236, 1371, 1489
Bso31I	GGTCTC	1 cut(s)	635
Bsp1286I	GDGCHC	4 cut(s)	852, 978, 1510, 1536
Bsp143I	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
Bsp19I	CCATGG	2 cut(s)	308, 1271
BspACI	CCGC	6 cut(s)	261, 299, 654, 1129, 1463, 1569
BspANI	GGCC	5 cut(s)	212, 1190, 1236, 1371, 1489
BspCNI	CTCAG	3 cut(s)	1084, 1133, 1483
BspFNI	CGCG	6 cut(s)	299, 562, 564, 652, 654, 1637
BspHI	TCATGA	2 cut(s)	694, 1513
BspLI	GGNNCC	4 cut(s)	40, 597, 741, 1669
BspPI	GGATC	4 cut(s)	534, 1047, 1069, 1416
BspQI	GCTCTTC	2 cut(s)	1287, 1434
BspT107I	GGYRCC	3 cut(s)	595, 739, 1667
BspTNI	GGTCTC	1 cut(s)	635
BsrBI	CCGCTC	1 cut(s)	1131
BsrFI	RCCGGY	1 cut(s)	1367
BsrI	ACTGG	1 cut(s)	1224
BssAI	RCCGGY	1 cut(s)	1367
BssECI	CCNNGG	7 cut(s)	308, 397, 791, 1014, 1035, 1191, 1271
BssHII	GCGCGC	1 cut(s)	1635
BssMI	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
BssSI	CACGAG	2 cut(s)	1178, 1523
BssT1I	CCWWGG	5 cut(s)	308, 397, 791, 1191, 1271
Bst2BI	CACGAG	2 cut(s)	1178, 1523
Bst2UI	CCWGG	2 cut(s)	548, 1016
Bst4CI	ACNGT	4 cut(s)	428, 868, 1378, 1601
Bst6I	CTCTTC	4 cut(s)	1287, 1434, 1496, 1683
BstAPI	GCANNNNNTGC	2 cut(s)	180, 1145
BstC8I	GCNNGC	7 cut(s)	315, 343, 661, 1141, 1278, 1637, 1677
BstDEI	CTNAG	4 cut(s)	899, 1071, 1120, 1491
BstDSI	CCRYGG	2 cut(s)	308, 1271
BstEII	GGTNACC	1 cut(s)	550
BstF5I	GGATG	2 cut(s)	361, 1338
BstFNI	CGCG	6 cut(s)	299, 562, 564, 652, 654, 1637
BstHHI	GCGC	4 cut(s)	564, 654, 1637, 1639
BstKTI	GATC	8 cut(s)	112, 529, 560, 1042, 1077, 1090, 1411, 1659
BstMAI	GTCTC	3 cut(s)	64, 635, 1641
BstMBI	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
BstMCI	CGRYCG	1 cut(s)	560
BstMWI	GCNNNNNNNGC	5 cut(s)	180, 660, 1145, 1540, 1676
BstNI	CCWGG	2 cut(s)	548, 1016
BstNSI	RCATGY	2 cut(s)	183, 1143
BstPI	GGTNACC	1 cut(s)	550
BstSCI	CCNGG	4 cut(s)	546, 1014, 1034, 1576
BstSLI	GKGCMC	1 cut(s)	1510
BstUI	CGCG	6 cut(s)	299, 562, 564, 652, 654, 1637
BstV1I	GCAGC	2 cut(s)	10, 502
BstV2I	GAAGAC	1 cut(s)	276
BstX2I	RGATCY	2 cut(s)	1074, 1087
BstYI	RGATCY	2 cut(s)	1074, 1087
BsuRI	GGCC	5 cut(s)	212, 1190, 1236, 1371, 1489
BtgI	CCRYGG	2 cut(s)	308, 1271
BtsCI	GGATG	2 cut(s)	361, 1338
BtsIMutI	CAGTG	3 cut(s)	433, 873, 1231
Cac8I	GCNNGC	7 cut(s)	315, 343, 661, 1141, 1278, 1637, 1677
CciI	TCATGA	2 cut(s)	694, 1513
CfoI	GCGC	4 cut(s)	564, 654, 1637, 1639
Cfr10I	RCCGGY	1 cut(s)	1367
Cfr13I	GGNCC	2 cut(s)	1330, 1361
Csp6I	GTAC	7 cut(s)	177, 292, 451, 466, 841, 1114, 1545
CviAII	CATG	9 cut(s)	168, 180, 309, 695, 932, 1140, 1272, 1412, 1514
CviQI	GTAC	7 cut(s)	177, 292, 451, 466, 841, 1114, 1545
DdeI	CTNAG	4 cut(s)	899, 1071, 1120, 1491
DpnI	GATC	8 cut(s)	111, 528, 559, 1041, 1076, 1089, 1410, 1658
DpnII	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
DraIII	CACNNNGTG	1 cut(s)	902
DriI	GACNNNNNGTC	1 cut(s)	277
EaeI	YGGCCR	1 cut(s)	1369
Eam1104I	CTCTTC	4 cut(s)	1287, 1434, 1496, 1683
Eam1105I	GACNNNNNGTC	1 cut(s)	277
EarI	CTCTTC	4 cut(s)	1287, 1434, 1496, 1683
Ecl136II	GAGCTC	1 cut(s)	976
Eco130I	CCWWGG	5 cut(s)	308, 397, 791, 1191, 1271
Eco147I	AGGCCT	1 cut(s)	212
Eco24I	GRGCYC	1 cut(s)	978
Eco31I	GGTCTC	1 cut(s)	635
Eco47I	GGWCC	2 cut(s)	1330, 1361
Eco53kI	GAGCTC	1 cut(s)	976
Eco91I	GGTNACC	1 cut(s)	550
EcoICRI	GAGCTC	1 cut(s)	976
EcoO109I	RGGNCCY	1 cut(s)	1330
EcoO65I	GGTNACC	1 cut(s)	550
EcoRII	CCWGG	2 cut(s)	546, 1014
EcoT14I	CCWWGG	5 cut(s)	308, 397, 791, 1191, 1271
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	1 cut(s)	978
ErhI	CCWWGG	5 cut(s)	308, 397, 791, 1191, 1271
FaeI	CATG	9 cut(s)	171, 183, 312, 698, 935, 1143, 1275, 1415, 1517
FaqI	GGGAC	1 cut(s)	827
FatI	CATG	9 cut(s)	167, 179, 308, 694, 931, 1139, 1271, 1411, 1513
FbaI	TGATCA	1 cut(s)	109
FblI	GTMKAC	1 cut(s)	1696
Fnu4HI	GCNGC	2 cut(s)	24, 516
FokI	GGATG	2 cut(s)	368, 1325
FriOI	GRGCYC	1 cut(s)	978
Fsp4HI	GCNGC	2 cut(s)	24, 516
FspBI	CTAG	2 cut(s)	611, 1091
GlaI	GCGC	4 cut(s)	563, 653, 1636, 1638
GluI	GCNGC	2 cut(s)	24, 516
GsuI	CTGGAG	3 cut(s)	1037, 1207, 1661
HaeIII	GGCC	5 cut(s)	212, 1190, 1236, 1371, 1489
HapII	CCGG	3 cut(s)	1035, 1368, 1577
HhaI	GCGC	4 cut(s)	564, 654, 1637, 1639
Hin1II	CATG	9 cut(s)	171, 183, 312, 698, 935, 1143, 1275, 1415, 1517
Hin6I	GCGC	4 cut(s)	562, 652, 1635, 1637
HinP1I	GCGC	4 cut(s)	562, 652, 1635, 1637
HindIII	AAGCTT	2 cut(s)	143, 198
HinfI	GANTC	7 cut(s)	189, 278, 332, 761, 937, 1019, 1295
HpaII	CCGG	3 cut(s)	1035, 1368, 1577
HphI	GGTGA	7 cut(s)	119, 184, 248, 544, 1118, 1304, 1426
Hpy166II	GTNNAC	2 cut(s)	1508, 1697
Hpy188I	TCNGA	9 cut(s)	7, 43, 79, 114, 331, 447, 607, 678, 1074
Hpy188III	TCNNGA	5 cut(s)	695, 727, 1312, 1514, 1537
Hpy8I	GTNNAC	2 cut(s)	1508, 1697
Hpy99I	CGWCG	2 cut(s)	11, 56
HpyAV	CCTTC	7 cut(s)	127, 516, 586, 608, 961, 1444, 1728
HpyCH4III	ACNGT	4 cut(s)	428, 868, 1378, 1601
HpyCH4IV	ACGT	3 cut(s)	54, 909, 1699
HpyCH4V	TGCA	7 cut(s)	164, 174, 317, 971, 1139, 1202, 1508
HpyF10VI	GCNNNNNNNGC	5 cut(s)	180, 660, 1145, 1540, 1676
HpyF3I	CTNAG	4 cut(s)	899, 1071, 1120, 1491
HpySE526I	ACGT	3 cut(s)	54, 909, 1699
Hsp92II	CATG	9 cut(s)	171, 183, 312, 698, 935, 1143, 1275, 1415, 1517
HspAI	GCGC	4 cut(s)	562, 652, 1635, 1637
Ksp22I	TGATCA	1 cut(s)	109
Kzo9I	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
LguI	GCTCTTC	2 cut(s)	1287, 1434
LmnI	GCTCC	3 cut(s)	44, 455, 1136
Lsp1109I	GCAGC	2 cut(s)	10, 502
LweI	GCATC	5 cut(s)	173, 294, 451, 907, 1189
MaeI	CTAG	2 cut(s)	611, 1091
MaeII	ACGT	3 cut(s)	54, 909, 1699
MaeIII	GTNAC	8 cut(s)	98, 391, 422, 550, 1081, 1226, 1292, 1378
MalI	GATC	8 cut(s)	111, 528, 559, 1041, 1076, 1089, 1410, 1658
MbiI	CCGCTC	1 cut(s)	1131
MboI	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
MflI	RGATCY	2 cut(s)	1074, 1087
MhlI	GDGCHC	4 cut(s)	852, 978, 1510, 1536
MluCI	AATT	9 cut(s)	573, 668, 1023, 1045, 1322, 1466, 1703, 1730, 1747
MlyI	GAGTC	4 cut(s)	287, 946, 1028, 1289
MmeI	TCCRAC	1 cut(s)	30
MnlI	CCTC	7 cut(s)	75, 202, 682, 1636, 1675, 1722, 1725
Mph1103I	ATGCAT	1 cut(s)	1204
MroXI	GAANNNNTTC	1 cut(s)	1307
MseI	TTAA	6 cut(s)	18, 117, 1185, 1458, 1727, 1750
MslI	CAYNNNNRTG	1 cut(s)	169
MspA1I	CMGCKG	1 cut(s)	263
MspI	CCGG	3 cut(s)	1035, 1368, 1577
MspR9I	CCNGG	4 cut(s)	548, 1016, 1036, 1578
MvaI	CCWGG	2 cut(s)	548, 1016
MvnI	CGCG	6 cut(s)	299, 562, 564, 652, 654, 1637
MwoI	GCNNNNNNNGC	5 cut(s)	180, 660, 1145, 1540, 1676
NciI	CCSGG	2 cut(s)	1036, 1578
NcoI	CCATGG	2 cut(s)	308, 1271
NdeII	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
NlaIII	CATG	9 cut(s)	171, 183, 312, 698, 935, 1143, 1275, 1415, 1517
NlaIV	GGNNCC	4 cut(s)	40, 597, 741, 1669
NmuCI	GTSAC	7 cut(s)	391, 422, 550, 1081, 1226, 1292, 1378
NsiI	ATGCAT	1 cut(s)	1204
NspI	RCATGY	2 cut(s)	183, 1143
PaeI	GCATGC	1 cut(s)	1143
PagI	TCATGA	2 cut(s)	694, 1513
PauI	GCGCGC	1 cut(s)	1635
PceI	AGGCCT	1 cut(s)	212
PciSI	GCTCTTC	2 cut(s)	1287, 1434
PcsI	WCGNNNNNNNCGW	1 cut(s)	656
PdmI	GAANNNNTTC	1 cut(s)	1307
PfeI	GAWTC	3 cut(s)	189, 332, 761
PflFI	GACNNNGTC	1 cut(s)	56
PkrI	GCNGC	2 cut(s)	25, 517
Ple19I	CGATCG	1 cut(s)	560
PleI	GAGTC	4 cut(s)	286, 945, 1027, 1289
PpsI	GAGTC	4 cut(s)	286, 945, 1027, 1289
PpuMI	RGGWCCY	1 cut(s)	1330
Psp124BI	GAGCTC	1 cut(s)	978
Psp1406I	AACGTT	1 cut(s)	909
Psp5II	RGGWCCY	1 cut(s)	1330
Psp6I	CCWGG	2 cut(s)	546, 1014
PspEI	GGTNACC	1 cut(s)	550
PspGI	CCWGG	2 cut(s)	546, 1014
PspN4I	GGNNCC	4 cut(s)	40, 597, 741, 1669
PspPI	GGNCC	2 cut(s)	1330, 1361
PspPPI	RGGWCCY	1 cut(s)	1330
PsuI	RGATCY	2 cut(s)	1074, 1087
PsyI	GACNNNGTC	1 cut(s)	56
PteI	GCGCGC	1 cut(s)	1635
PvuI	CGATCG	1 cut(s)	560
RsaI	GTAC	7 cut(s)	178, 293, 452, 467, 842, 1115, 1546
RsaNI	GTAC	7 cut(s)	177, 292, 451, 466, 841, 1114, 1545
RseI	CAYNNNNRTG	1 cut(s)	169
SacI	GAGCTC	1 cut(s)	978
SapI	GCTCTTC	2 cut(s)	1287, 1434
SaqAI	TTAA	6 cut(s)	18, 117, 1185, 1458, 1727, 1750
SatI	GCNGC	2 cut(s)	24, 516
Sau3AI	GATC	8 cut(s)	109, 526, 557, 1039, 1074, 1087, 1408, 1656
Sau96I	GGNCC	2 cut(s)	1330, 1361
SchI	GAGTC	4 cut(s)	287, 946, 1028, 1289
ScrFI	CCNGG	4 cut(s)	548, 1016, 1036, 1578
SduI	GDGCHC	4 cut(s)	852, 978, 1510, 1536
SfaNI	GCATC	5 cut(s)	173, 294, 451, 907, 1189
SinI	GGWCC	2 cut(s)	1330, 1361
SmiMI	CAYNNNNRTG	1 cut(s)	169
SmlI	CTYRAG	1 cut(s)	1297
SmoI	CTYRAG	1 cut(s)	1297
SphI	GCATGC	1 cut(s)	1143
Sse9I	AATT	9 cut(s)	573, 668, 1023, 1045, 1322, 1466, 1703, 1730, 1747
SseBI	AGGCCT	1 cut(s)	212
SsiI	CCGC	6 cut(s)	261, 299, 654, 1129, 1463, 1569
SspI	AATATT	1 cut(s)	776
SspMI	CTAG	2 cut(s)	611, 1091
SstI	GAGCTC	1 cut(s)	978
StuI	AGGCCT	1 cut(s)	212
StyD4I	CCNGG	4 cut(s)	546, 1014, 1034, 1576
StyI	CCWWGG	5 cut(s)	308, 397, 791, 1191, 1271
TaaI	ACNGT	4 cut(s)	428, 868, 1378, 1601
TaiI	ACGT	3 cut(s)	57, 912, 1702
TaqI	TCGA	4 cut(s)	726, 1042, 1538, 1659
TaqII	GACCGA	1 cut(s)	1349
TasI	AATT	9 cut(s)	573, 668, 1023, 1045, 1322, 1466, 1703, 1730, 1747
TatI	WGTACW	2 cut(s)	176, 1113
TfiI	GAWTC	3 cut(s)	189, 332, 761
Tru1I	TTAA	6 cut(s)	18, 117, 1185, 1458, 1727, 1750
Tru9I	TTAA	6 cut(s)	18, 117, 1185, 1458, 1727, 1750
TscAI	CASTG	3 cut(s)	433, 873, 1231
TseFI	GTSAC	7 cut(s)	391, 422, 550, 1081, 1226, 1292, 1378
TseI	GCWGC	2 cut(s)	23, 515
Tsp45I	GTSAC	7 cut(s)	391, 422, 550, 1081, 1226, 1292, 1378
TspDTI	ATGAA	8 cut(s)	234, 282, 519, 771, 1207, 1327, 1463, 1502
TspGWI	ACGGA	2 cut(s)	86, 468
TspRI	CASTG	3 cut(s)	433, 873, 1231
Tth111I	GACNNNGTC	1 cut(s)	56
VneI	GTGCAC	1 cut(s)	1506
VpaK11BI	GGWCC	2 cut(s)	1330, 1361
XapI	RAATTY	5 cut(s)	668, 1045, 1322, 1466, 1703
XceI	RCATGY	2 cut(s)	183, 1143
XmiI	GTMKAC	1 cut(s)	1696
XmnI	GAANNNNTTC	1 cut(s)	1307
XspI	CTAG	2 cut(s)	611, 1091
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.