Glycine-rich cell wall structural
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD13G1153100.v1.1 MD16G1153500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0425401 |
| rosa_laevigata | RLG00000007372 |
| rosa_roxburghii | Rroxscaffold_5G00367360 |
| rosa_rugosa | Rorug04G0202600 |
| rosa_samantha | Rh4AG259800 Rh4BG265700 Rh4CG277000 |
| rosa_wichuraiana | Rw4G022490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1178 |
| Acc36I | ACCTGC | 1 cut(s) | 1178 |
| AccB1I | GGYRCC | 2 cut(s) | 758, 1148 |
| AclWI | GGATC | 3 cut(s) | 249, 262, 334 |
| AluBI | AGCT | 2 cut(s) | 353, 383 |
| AluI | AGCT | 2 cut(s) | 353, 383 |
| Alw26I | GTCTC | 1 cut(s) | 642 |
| AlwI | GGATC | 3 cut(s) | 249, 262, 334 |
| AoxI | GGCC | 1 cut(s) | 103 |
| AspA2I | CCTAGG | 1 cut(s) | 106 |
| AsuC2I | CCSGG | 1 cut(s) | 259 |
| AsuNHI | GCTAGC | 1 cut(s) | 55 |
| AvrII | CCTAGG | 1 cut(s) | 106 |
| BamHI | GGATCC | 1 cut(s) | 254 |
| BanI | GGYRCC | 2 cut(s) | 758, 1148 |
| BcnI | CCSGG | 1 cut(s) | 259 |
| BcoDI | GTCTC | 1 cut(s) | 642 |
| BfaI | CTAG | 2 cut(s) | 56, 107 |
| BfuAI | ACCTGC | 1 cut(s) | 1178 |
| BisI | GCNGC | 5 cut(s) | 310, 703, 907, 1033, 1138 |
| BlnI | CCTAGG | 1 cut(s) | 106 |
| BlsI | GCNGC | 5 cut(s) | 311, 704, 908, 1034, 1139 |
| Bme1390I | CCNGG | 1 cut(s) | 259 |
| BmiI | GGNNCC | 3 cut(s) | 256, 760, 1150 |
| BmrFI | CCNGG | 1 cut(s) | 259 |
| BmtI | GCTAGC | 1 cut(s) | 59 |
| BpmI | CTGGAG | 4 cut(s) | 291, 741, 1038, 1068 |
| BpuMI | CCSGG | 1 cut(s) | 259 |
| BsaJI | CCNNGG | 2 cut(s) | 106, 258 |
| Bse118I | RCCGGY | 2 cut(s) | 761, 1151 |
| BseDI | CCNNGG | 2 cut(s) | 106, 258 |
| BseYI | CCCAGC | 1 cut(s) | 167 |
| BsgI | GTGCAG | 2 cut(s) | 198, 1206 |
| BshFI | GGCC | 1 cut(s) | 105 |
| BshNI | GGYRCC | 2 cut(s) | 758, 1148 |
| BsiSI | CCGG | 3 cut(s) | 258, 762, 1152 |
| BsmAI | GTCTC | 1 cut(s) | 642 |
| BsnI | GGCC | 1 cut(s) | 105 |
| Bsp143I | GATC | 2 cut(s) | 254, 326 |
| BspANI | GGCC | 1 cut(s) | 105 |
| BspLI | GGNNCC | 3 cut(s) | 256, 760, 1150 |
| BspMI | ACCTGC | 1 cut(s) | 1178 |
| BspOI | GCTAGC | 1 cut(s) | 59 |
| BspPI | GGATC | 3 cut(s) | 249, 262, 334 |
| BspT107I | GGYRCC | 2 cut(s) | 758, 1148 |
| BsrFI | RCCGGY | 2 cut(s) | 761, 1151 |
| BssAI | RCCGGY | 2 cut(s) | 761, 1151 |
| BssECI | CCNNGG | 2 cut(s) | 106, 258 |
| BssMI | GATC | 2 cut(s) | 254, 326 |
| BssT1I | CCWWGG | 1 cut(s) | 106 |
| Bst6I | CTCTTC | 2 cut(s) | 418, 454 |
| BstC8I | GCNNGC | 6 cut(s) | 57, 133, 355, 571, 601, 805 |
| BstDEI | CTNAG | 1 cut(s) | 15 |
| BstKTI | GATC | 2 cut(s) | 257, 329 |
| BstMAI | GTCTC | 1 cut(s) | 642 |
| BstMBI | GATC | 2 cut(s) | 254, 326 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 309, 543, 699, 861, 903, 945, 996 |
| BstSCI | CCNGG | 1 cut(s) | 257 |
| BstX2I | RGATCY | 2 cut(s) | 254, 326 |
| BstYI | RGATCY | 2 cut(s) | 254, 326 |
| BsuRI | GGCC | 1 cut(s) | 105 |
| BveI | ACCTGC | 1 cut(s) | 1178 |
| Cac8I | GCNNGC | 6 cut(s) | 57, 133, 355, 571, 601, 805 |
| Cfr10I | RCCGGY | 2 cut(s) | 761, 1151 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 220, 255 |
| CviJI | RGCY | 5 cut(s) | 105, 131, 353, 383, 1173 |
| CviKI_1 | RGCY | 5 cut(s) | 105, 131, 353, 383, 1173 |
| DdeI | CTNAG | 1 cut(s) | 15 |
| DpnI | GATC | 2 cut(s) | 256, 328 |
| DpnII | GATC | 2 cut(s) | 254, 326 |
| Eam1104I | CTCTTC | 2 cut(s) | 418, 454 |
| EarI | CTCTTC | 2 cut(s) | 418, 454 |
| Eco130I | CCWWGG | 1 cut(s) | 106 |
| Eco147I | AGGCCT | 1 cut(s) | 105 |
| EcoT14I | CCWWGG | 1 cut(s) | 106 |
| ErhI | CCWWGG | 1 cut(s) | 106 |
| FaiI | YATR | 2 cut(s) | 21, 911 |
| FauI | CCCGC | 4 cut(s) | 482, 566, 596, 800 |
| Fnu4HI | GCNGC | 5 cut(s) | 310, 703, 907, 1033, 1138 |
| Fsp4HI | GCNGC | 5 cut(s) | 310, 703, 907, 1033, 1138 |
| FspBI | CTAG | 2 cut(s) | 56, 107 |
| GluI | GCNGC | 5 cut(s) | 310, 703, 907, 1033, 1138 |
| GsaI | CCCAGC | 1 cut(s) | 171 |
| GsuI | CTGGAG | 4 cut(s) | 291, 741, 1038, 1068 |
| HaeIII | GGCC | 1 cut(s) | 105 |
| HapII | CCGG | 3 cut(s) | 258, 762, 1152 |
| HpaII | CCGG | 3 cut(s) | 258, 762, 1152 |
| Hpy188I | TCNGA | 1 cut(s) | 100 |
| Hpy188III | TCNNGA | 1 cut(s) | 1047 |
| HpyAV | CCTTC | 2 cut(s) | 95, 515 |
| HpyCH4V | TGCA | 2 cut(s) | 179, 1187 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 309, 543, 699, 861, 903, 945, 996 |
| HpyF3I | CTNAG | 1 cut(s) | 15 |
| Kzo9I | GATC | 2 cut(s) | 254, 326 |
| LmnI | GCTCC | 2 cut(s) | 350, 380 |
| MaeI | CTAG | 2 cut(s) | 56, 107 |
| MalI | GATC | 2 cut(s) | 256, 328 |
| MboI | GATC | 2 cut(s) | 254, 326 |
| MboII | GAAGA | 2 cut(s) | 435, 471 |
| MflI | RGATCY | 2 cut(s) | 254, 326 |
| MluCI | AATT | 2 cut(s) | 147, 1233 |
| MmeI | TCCRAC | 7 cut(s) | 322, 352, 382, 418, 904, 1105, 1180 |
| MseI | TTAA | 1 cut(s) | 1249 |
| MspI | CCGG | 3 cut(s) | 258, 762, 1152 |
| MspR9I | CCNGG | 1 cut(s) | 259 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 309, 543, 699, 861, 903, 945, 996 |
| NciI | CCSGG | 1 cut(s) | 259 |
| NdeII | GATC | 2 cut(s) | 254, 326 |
| NheI | GCTAGC | 1 cut(s) | 55 |
| NlaIV | GGNNCC | 3 cut(s) | 256, 760, 1150 |
| PaqCI | CACCTGC | 1 cut(s) | 1178 |
| PceI | AGGCCT | 1 cut(s) | 105 |
| PkrI | GCNGC | 5 cut(s) | 311, 704, 908, 1034, 1139 |
| PspFI | CCCAGC | 1 cut(s) | 167 |
| PspN4I | GGNNCC | 3 cut(s) | 256, 760, 1150 |
| PsuI | RGATCY | 2 cut(s) | 254, 326 |
| SaqAI | TTAA | 1 cut(s) | 1249 |
| SatI | GCNGC | 5 cut(s) | 310, 703, 907, 1033, 1138 |
| Sau3AI | GATC | 2 cut(s) | 254, 326 |
| ScrFI | CCNGG | 1 cut(s) | 259 |
| Sse9I | AATT | 2 cut(s) | 147, 1233 |
| SseBI | AGGCCT | 1 cut(s) | 105 |
| SspMI | CTAG | 2 cut(s) | 56, 107 |
| StuI | AGGCCT | 1 cut(s) | 105 |
| StyD4I | CCNGG | 1 cut(s) | 257 |
| StyI | CCWWGG | 1 cut(s) | 106 |
| TasI | AATT | 2 cut(s) | 147, 1233 |
| TauI | GCSGC | 5 cut(s) | 312, 705, 909, 1035, 1140 |
| Tru1I | TTAA | 1 cut(s) | 1249 |
| Tru9I | TTAA | 1 cut(s) | 1249 |
| XmaJI | CCTAGG | 1 cut(s) | 106 |
| XspI | CTAG | 2 cut(s) | 56, 107 |