Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23410 AT3G23410 |
| fragaria_vesca | FvH4_4g04030 FvH4_4g04030 FvH4_4g04030 FvH4_4g04030 |
| malus_domestica | MD13G1216700.v1.1 |
| prunus_persica | Prupe.1G042400_v2.0.a1 |
| pyrus_communis | pycom13g19020 |
| rosa_chinensis | RchiOBHm_Chr4g0394301 |
| rosa_laevigata | RLG00000009705 RLG00000009706 |
| rosa_multiflora | Rmu_ssc0000423.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00339330 |
| rosa_rugosa | Rorug03G0367500.1 |
| rosa_samantha | Rh4AG051500 Rh4BG048700 Rh4CG055400 Rh4DG048800 |
| rosa_wichuraiana | Rw4G004110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 737 |
| AccB1I | GGYRCC | 1 cut(s) | 1220 |
| AciI | CCGC | 4 cut(s) | 200, 604, 1940, 2027 |
| AclWI | GGATC | 2 cut(s) | 943, 1051 |
| AcsI | RAATTY | 2 cut(s) | 661, 1498 |
| AcuI | CTGAAG | 6 cut(s) | 66, 596, 911, 986, 1445, 1691 |
| AfaI | GTAC | 1 cut(s) | 1131 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 223, 444, 1604 |
| Alw21I | GWGCWC | 1 cut(s) | 1390 |
| Alw26I | GTCTC | 2 cut(s) | 1861, 2150 |
| AlwI | GGATC | 2 cut(s) | 943, 1051 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 776, 1948 |
| Ama87I | CYCGRG | 1 cut(s) | 495 |
| AoxI | GGCC | 8 cut(s) | 249, 353, 605, 793, 1156, 1359, 1607, 1937 |
| ApeKI | GCWGC | 5 cut(s) | 770, 773, 776, 1348, 1823 |
| ApoI | RAATTY | 2 cut(s) | 661, 1498 |
| AseI | ATTAAT | 1 cut(s) | 963 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 416, 680, 1116, 1618 |
| AspS9I | GGNCC | 5 cut(s) | 249, 354, 403, 1607, 1937 |
| AsuC2I | CCSGG | 2 cut(s) | 1611, 1723 |
| AsuHPI | GGTGA | 5 cut(s) | 161, 253, 515, 866, 2113 |
| AvaI | CYCGRG | 1 cut(s) | 495 |
| AvaII | GGWCC | 1 cut(s) | 403 |
| BanI | GGYRCC | 1 cut(s) | 1220 |
| BanII | GRGCYC | 2 cut(s) | 1390, 1634 |
| BbsI | GAAGAC | 1 cut(s) | 1656 |
| Bbv12I | GWGCWC | 1 cut(s) | 1390 |
| BbvCI | CCTCAGC | 1 cut(s) | 1975 |
| BbvI | GCAGC | 5 cut(s) | 760, 763, 782, 1335, 1835 |
| BccI | CCATC | 6 cut(s) | 221, 905, 1853, 1981, 2072, 2132 |
| BceAI | ACGGC | 1 cut(s) | 1208 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1330, 1364 |
| BciVI | GTATCC | 2 cut(s) | 533, 1060 |
| BclI | TGATCA | 4 cut(s) | 568, 871, 1227, 2118 |
| BcnI | CCSGG | 2 cut(s) | 1611, 1723 |
| BcoDI | GTCTC | 2 cut(s) | 1861, 2150 |
| BfaI | CTAG | 3 cut(s) | 1154, 1416, 2094 |
| BfmI | CTRYAG | 3 cut(s) | 407, 1926, 1996 |
| BfuI | GTATCC | 2 cut(s) | 533, 1060 |
| BisI | GCNGC | 8 cut(s) | 201, 605, 771, 774, 777, 1349, 1824, 1940 |
| BlsI | GCNGC | 8 cut(s) | 202, 606, 772, 775, 778, 1350, 1825, 1941 |
| BmcAI | AGTACT | 1 cut(s) | 1131 |
| Bme1390I | CCNGG | 2 cut(s) | 1611, 1723 |
| Bme18I | GGWCC | 1 cut(s) | 403 |
| BmeT110I | CYCGRG | 1 cut(s) | 495 |
| BmgT120I | GGNCC | 5 cut(s) | 249, 354, 403, 1607, 1937 |
| BmiI | GGNNCC | 3 cut(s) | 313, 1222, 1720 |
| BmrFI | CCNGG | 2 cut(s) | 1611, 1723 |
| BmsI | GCATC | 2 cut(s) | 81, 1195 |
| BpiI | GAAGAC | 1 cut(s) | 1656 |
| BpmI | CTGGAG | 1 cut(s) | 1922 |
| Bpu10I | CCTNAGC | 2 cut(s) | 790, 1975 |
| BpuMI | CCSGG | 2 cut(s) | 1611, 1723 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2123 |
| BsaJI | CCNNGG | 3 cut(s) | 1159, 1634, 1722 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 750, 780 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 223, 444, 1604 |
| Bse118I | RCCGGY | 1 cut(s) | 1597 |
| Bse1I | ACTGG | 3 cut(s) | 1240, 1905, 1953 |
| Bse3DI | GCAATG | 1 cut(s) | 1068 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2123 |
| BseDI | CCNNGG | 3 cut(s) | 1159, 1634, 1722 |
| BseGI | GGATG | 5 cut(s) | 16, 213, 1210, 1244, 2124 |
| BseJI | GATNNNNATC | 1 cut(s) | 2123 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 223, 444, 1604 |
| BseMI | GCAATG | 1 cut(s) | 1068 |
| BseMII | CTCAG | 8 cut(s) | 78, 804, 852, 1086, 1239, 1389, 1856, 1989 |
| BseNI | ACTGG | 3 cut(s) | 1240, 1905, 1953 |
| BseRI | GAGGAG | 3 cut(s) | 311, 774, 1919 |
| BseXI | GCAGC | 5 cut(s) | 760, 763, 782, 1335, 1835 |
| BseYI | CCCAGC | 1 cut(s) | 2049 |
| BshFI | GGCC | 8 cut(s) | 251, 355, 607, 795, 1158, 1361, 1609, 1939 |
| BshNI | GGYRCC | 1 cut(s) | 1220 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1390 |
| BsiHKCI | CYCGRG | 1 cut(s) | 495 |
| BsiSI | CCGG | 3 cut(s) | 1598, 1610, 1722 |
| BslFI | GGGAC | 1 cut(s) | 1195 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 223, 444, 1604 |
| BsmAI | GTCTC | 2 cut(s) | 1861, 2150 |
| BsmFI | GGGAC | 1 cut(s) | 1195 |
| BsmI | GAATGC | 3 cut(s) | 514, 894, 1671 |
| BsnI | GGCC | 8 cut(s) | 251, 355, 607, 795, 1158, 1361, 1609, 1939 |
| BsoBI | CYCGRG | 1 cut(s) | 495 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1390, 1634 |
| Bsp143I | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| BspACI | CCGC | 4 cut(s) | 200, 604, 1940, 2027 |
| BspANI | GGCC | 8 cut(s) | 251, 355, 607, 795, 1158, 1361, 1609, 1939 |
| BspCNI | CTCAG | 8 cut(s) | 79, 803, 851, 1087, 1240, 1388, 1857, 1988 |
| BspLI | GGNNCC | 3 cut(s) | 313, 1222, 1720 |
| BspMAI | CTGCAG | 2 cut(s) | 411, 1930 |
| BspPI | GGATC | 2 cut(s) | 943, 1051 |
| BspT107I | GGYRCC | 1 cut(s) | 1220 |
| BsrDI | GCAATG | 1 cut(s) | 1068 |
| BsrFI | RCCGGY | 1 cut(s) | 1597 |
| BsrI | ACTGG | 3 cut(s) | 1240, 1905, 1953 |
| BssAI | RCCGGY | 1 cut(s) | 1597 |
| BssECI | CCNNGG | 3 cut(s) | 1159, 1634, 1722 |
| BssMI | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| BssT1I | CCWWGG | 2 cut(s) | 1159, 1634 |
| Bst4CI | ACNGT | 5 cut(s) | 68, 907, 943, 1072, 2144 |
| Bst6I | CTCTTC | 7 cut(s) | 31, 85, 615, 853, 1337, 1738, 2072 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 776 |
| BstC8I | GCNNGC | 4 cut(s) | 450, 531, 787, 1803 |
| BstF5I | GGATG | 5 cut(s) | 16, 213, 1210, 1244, 2124 |
| BstKTI | GATC | 8 cut(s) | 571, 874, 938, 1021, 1029, 1046, 1230, 2121 |
| BstMAI | GTCTC | 2 cut(s) | 1861, 2150 |
| BstMBI | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 776, 782, 1385, 1829 |
| BstSCI | CCNGG | 2 cut(s) | 1609, 1721 |
| BstSFI | CTRYAG | 3 cut(s) | 407, 1926, 1996 |
| BstV1I | GCAGC | 5 cut(s) | 760, 763, 782, 1335, 1835 |
| BstV2I | GAAGAC | 1 cut(s) | 1656 |
| BsuI | GTATCC | 2 cut(s) | 533, 1060 |
| BsuRI | GGCC | 8 cut(s) | 251, 355, 607, 795, 1158, 1361, 1609, 1939 |
| BtsCI | GGATG | 5 cut(s) | 16, 213, 1210, 1244, 2124 |
| BtsI | GCAGTG | 1 cut(s) | 1215 |
| BtsIMutI | CAGTG | 3 cut(s) | 1215, 1551, 1946 |
| Cac8I | GCNNGC | 4 cut(s) | 450, 531, 787, 1803 |
| CaiI | CAGNNNCTG | 2 cut(s) | 776, 1948 |
| Cfr10I | RCCGGY | 1 cut(s) | 1597 |
| Cfr13I | GGNCC | 5 cut(s) | 249, 354, 403, 1607, 1937 |
| Csp6I | GTAC | 1 cut(s) | 1130 |
| CviAII | CATG | 7 cut(s) | 71, 351, 545, 869, 1194, 1918, 2116 |
| CviQI | GTAC | 1 cut(s) | 1130 |
| DpnI | GATC | 8 cut(s) | 570, 873, 937, 1020, 1028, 1045, 1229, 2120 |
| DpnII | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| Eam1104I | CTCTTC | 7 cut(s) | 31, 85, 615, 853, 1337, 1738, 2072 |
| EarI | CTCTTC | 7 cut(s) | 31, 85, 615, 853, 1337, 1738, 2072 |
| Ecl136II | GAGCTC | 1 cut(s) | 1388 |
| Eco130I | CCWWGG | 2 cut(s) | 1159, 1634 |
| Eco147I | AGGCCT | 1 cut(s) | 1158 |
| Eco24I | GRGCYC | 2 cut(s) | 1390, 1634 |
| Eco47I | GGWCC | 1 cut(s) | 403 |
| Eco53kI | GAGCTC | 1 cut(s) | 1388 |
| Eco57I | CTGAAG | 6 cut(s) | 66, 596, 911, 986, 1445, 1691 |
| Eco88I | CYCGRG | 1 cut(s) | 495 |
| EcoICRI | GAGCTC | 1 cut(s) | 1388 |
| EcoO109I | RGGNCCY | 2 cut(s) | 249, 403 |
| EcoRI | GAATTC | 1 cut(s) | 661 |
| EcoT14I | CCWWGG | 2 cut(s) | 1159, 1634 |
| EcoT38I | GRGCYC | 2 cut(s) | 1390, 1634 |
| ErhI | CCWWGG | 2 cut(s) | 1159, 1634 |
| FaeI | CATG | 7 cut(s) | 74, 354, 548, 872, 1197, 1921, 2119 |
| FaqI | GGGAC | 1 cut(s) | 1195 |
| FatI | CATG | 7 cut(s) | 70, 350, 544, 868, 1193, 1917, 2115 |
| FbaI | TGATCA | 4 cut(s) | 568, 871, 1227, 2118 |
| Fnu4HI | GCNGC | 8 cut(s) | 201, 605, 771, 774, 777, 1349, 1824, 1940 |
| FokI | GGATG | 5 cut(s) | 3, 200, 1217, 1251, 2111 |
| FriOI | GRGCYC | 2 cut(s) | 1390, 1634 |
| Fsp4HI | GCNGC | 8 cut(s) | 201, 605, 771, 774, 777, 1349, 1824, 1940 |
| FspBI | CTAG | 3 cut(s) | 1154, 1416, 2094 |
| GluI | GCNGC | 8 cut(s) | 201, 605, 771, 774, 777, 1349, 1824, 1940 |
| GsaI | CCCAGC | 1 cut(s) | 2053 |
| GsuI | CTGGAG | 1 cut(s) | 1922 |
| HaeIII | GGCC | 8 cut(s) | 251, 355, 607, 795, 1158, 1361, 1609, 1939 |
| HapII | CCGG | 3 cut(s) | 1598, 1610, 1722 |
| Hin1II | CATG | 7 cut(s) | 74, 354, 548, 872, 1197, 1921, 2119 |
| HpaII | CCGG | 3 cut(s) | 1598, 1610, 1722 |
| HphI | GGTGA | 5 cut(s) | 161, 253, 515, 866, 2113 |
| Hpy166II | GTNNAC | 4 cut(s) | 152, 364, 460, 1421 |
| Hpy188I | TCNGA | 9 cut(s) | 573, 615, 660, 841, 1048, 1446, 1504, 1854, 1986 |
| Hpy188III | TCNNGA | 5 cut(s) | 812, 888, 1004, 1680, 1913 |
| Hpy8I | GTNNAC | 4 cut(s) | 152, 364, 460, 1421 |
| HpyAV | CCTTC | 8 cut(s) | 193, 367, 610, 665, 1106, 1729, 1928, 2015 |
| HpyCH4III | ACNGT | 5 cut(s) | 68, 907, 943, 1072, 2144 |
| HpyCH4IV | ACGT | 2 cut(s) | 720, 732 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 776, 782, 1385, 1829 |
| HpySE526I | ACGT | 2 cut(s) | 720, 732 |
| Hsp92II | CATG | 7 cut(s) | 74, 354, 548, 872, 1197, 1921, 2119 |
| Ksp22I | TGATCA | 4 cut(s) | 568, 871, 1227, 2118 |
| Kzo9I | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| LmnI | GCTCC | 4 cut(s) | 865, 1385, 1829, 1992 |
| Lsp1109I | GCAGC | 5 cut(s) | 760, 763, 782, 1335, 1835 |
| LweI | GCATC | 2 cut(s) | 81, 1195 |
| MaeI | CTAG | 3 cut(s) | 1154, 1416, 2094 |
| MaeII | ACGT | 2 cut(s) | 720, 732 |
| MaeIII | GTNAC | 7 cut(s) | 728, 901, 1090, 1366, 1729, 1921, 1944 |
| MalI | GATC | 8 cut(s) | 570, 873, 937, 1020, 1028, 1045, 1229, 2120 |
| MboI | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| MfeI | CAATTG | 1 cut(s) | 1833 |
| MhlI | GDGCHC | 2 cut(s) | 1390, 1634 |
| MlyI | GAGTC | 3 cut(s) | 1487, 1562, 1863 |
| MmeI | TCCRAC | 2 cut(s) | 366, 1424 |
| MroXI | GAANNNNTTC | 4 cut(s) | 416, 680, 1116, 1618 |
| MseI | TTAA | 7 cut(s) | 165, 963, 981, 1406, 1469, 1808, 2109 |
| MslI | CAYNNNNRTG | 2 cut(s) | 879, 1854 |
| MspA1I | CMGCKG | 2 cut(s) | 86, 773 |
| MspI | CCGG | 3 cut(s) | 1598, 1610, 1722 |
| MspR9I | CCNGG | 2 cut(s) | 1611, 1723 |
| MunI | CAATTG | 1 cut(s) | 1833 |
| Mva1269I | GAATGC | 3 cut(s) | 514, 894, 1671 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 776, 782, 1385, 1829 |
| NciI | CCSGG | 2 cut(s) | 1611, 1723 |
| NdeII | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| NlaIII | CATG | 7 cut(s) | 74, 354, 548, 872, 1197, 1921, 2119 |
| NlaIV | GGNNCC | 3 cut(s) | 313, 1222, 1720 |
| NmuCI | GTSAC | 2 cut(s) | 728, 1944 |
| PceI | AGGCCT | 1 cut(s) | 1158 |
| PctI | GAATGC | 3 cut(s) | 514, 894, 1671 |
| PdmI | GAANNNNTTC | 4 cut(s) | 416, 680, 1116, 1618 |
| PfeI | GAWTC | 9 cut(s) | 75, 621, 884, 1150, 1187, 1447, 1813, 2007, 2165 |
| PkrI | GCNGC | 8 cut(s) | 202, 606, 772, 775, 778, 1350, 1825, 1941 |
| PleI | GAGTC | 3 cut(s) | 1487, 1562, 1863 |
| PpsI | GAGTC | 3 cut(s) | 1487, 1562, 1863 |
| PpuMI | RGGWCCY | 1 cut(s) | 403 |
| PshBI | ATTAAT | 1 cut(s) | 963 |
| PsiI | TTATAA | 1 cut(s) | 737 |
| Psp124BI | GAGCTC | 1 cut(s) | 1390 |
| Psp5II | RGGWCCY | 1 cut(s) | 403 |
| PspFI | CCCAGC | 1 cut(s) | 2049 |
| PspN4I | GGNNCC | 3 cut(s) | 313, 1222, 1720 |
| PspPI | GGNCC | 5 cut(s) | 249, 354, 403, 1607, 1937 |
| PspPPI | RGGWCCY | 1 cut(s) | 403 |
| PstI | CTGCAG | 2 cut(s) | 411, 1930 |
| PstNI | CAGNNNCTG | 2 cut(s) | 776, 1948 |
| PvuII | CAGCTG | 2 cut(s) | 86, 773 |
| RsaI | GTAC | 1 cut(s) | 1131 |
| RsaNI | GTAC | 1 cut(s) | 1130 |
| RseI | CAYNNNNRTG | 2 cut(s) | 879, 1854 |
| SacI | GAGCTC | 1 cut(s) | 1390 |
| SaqAI | TTAA | 7 cut(s) | 165, 963, 981, 1406, 1469, 1808, 2109 |
| SatI | GCNGC | 8 cut(s) | 201, 605, 771, 774, 777, 1349, 1824, 1940 |
| Sau3AI | GATC | 8 cut(s) | 568, 871, 935, 1018, 1026, 1043, 1227, 2118 |
| Sau96I | GGNCC | 5 cut(s) | 249, 354, 403, 1607, 1937 |
| ScaI | AGTACT | 1 cut(s) | 1131 |
| SchI | GAGTC | 3 cut(s) | 1487, 1562, 1863 |
| ScrFI | CCNGG | 2 cut(s) | 1611, 1723 |
| SduI | GDGCHC | 2 cut(s) | 1390, 1634 |
| SfaNI | GCATC | 2 cut(s) | 81, 1195 |
| SfcI | CTRYAG | 3 cut(s) | 407, 1926, 1996 |
| SinI | GGWCC | 1 cut(s) | 403 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 879, 1854 |
| SseBI | AGGCCT | 1 cut(s) | 1158 |
| SsiI | CCGC | 4 cut(s) | 200, 604, 1940, 2027 |
| SspI | AATATT | 1 cut(s) | 712 |
| SspMI | CTAG | 3 cut(s) | 1154, 1416, 2094 |
| SstI | GAGCTC | 1 cut(s) | 1390 |
| StuI | AGGCCT | 1 cut(s) | 1158 |
| StyD4I | CCNGG | 2 cut(s) | 1609, 1721 |
| StyI | CCWWGG | 2 cut(s) | 1159, 1634 |
| TaaI | ACNGT | 5 cut(s) | 68, 907, 943, 1072, 2144 |
| TaiI | ACGT | 2 cut(s) | 723, 735 |
| TaqI | TCGA | 1 cut(s) | 813 |
| TatI | WGTACW | 1 cut(s) | 1129 |
| TauI | GCSGC | 3 cut(s) | 203, 607, 1942 |
| TfiI | GAWTC | 9 cut(s) | 75, 621, 884, 1150, 1187, 1447, 1813, 2007, 2165 |
| Tru1I | TTAA | 7 cut(s) | 165, 963, 981, 1406, 1469, 1808, 2109 |
| Tru9I | TTAA | 7 cut(s) | 165, 963, 981, 1406, 1469, 1808, 2109 |
| TscAI | CASTG | 3 cut(s) | 1215, 1551, 1953 |
| TseFI | GTSAC | 2 cut(s) | 728, 1944 |
| TseI | GCWGC | 5 cut(s) | 770, 773, 776, 1348, 1823 |
| Tsp45I | GTSAC | 2 cut(s) | 728, 1944 |
| TspDTI | ATGAA | 4 cut(s) | 153, 897, 1442, 1947 |
| TspRI | CASTG | 3 cut(s) | 1215, 1551, 1953 |
| VpaK11BI | GGWCC | 1 cut(s) | 403 |
| VspI | ATTAAT | 1 cut(s) | 963 |
| XapI | RAATTY | 2 cut(s) | 661, 1498 |
| XmnI | GAANNNNTTC | 4 cut(s) | 416, 680, 1116, 1618 |
| XspI | CTAG | 3 cut(s) | 1154, 1416, 2094 |
| ZrmI | AGTACT | 1 cut(s) | 1131 |