Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23410 AT3G23410 |
| fragaria_vesca | FvH4_4g04030 FvH4_4g04030 FvH4_4g04030 FvH4_4g04030 |
| malus_domestica | MD13G1216700.v1.1 |
| prunus_persica | Prupe.1G042400_v2.0.a1 |
| pyrus_communis | pycom13g19020 |
| rosa_chinensis | RchiOBHm_Chr4g0394301 |
| rosa_laevigata | RLG00000009705 RLG00000009706 |
| rosa_multiflora | Rmu_ssc0000423.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00339330 |
| rosa_rugosa | Rorug03G0367500.1 |
| rosa_samantha | Rh4AG051500 Rh4BG048700 Rh4CG055400 Rh4DG048800 |
| rosa_wichuraiana | Rw4G004110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 128 |
| Acc36I | ACCTGC | 1 cut(s) | 128 |
| AciI | CCGC | 5 cut(s) | 236, 1299, 2008, 2082, 2183 |
| AcsI | RAATTY | 2 cut(s) | 1234, 1661 |
| AcuI | CTGAAG | 1 cut(s) | 1070 |
| AcvI | CACGTG | 1 cut(s) | 453 |
| AcyI | GRCGYC | 1 cut(s) | 2262 |
| AfaI | GTAC | 2 cut(s) | 722, 1136 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 325, 546, 628, 1122, 1760, 1870 |
| AflIII | ACRYGT | 2 cut(s) | 450, 1846 |
| AgsI | TTSAA | 5 cut(s) | 251, 1666, 1748, 1836, 1994 |
| AjnI | CCWGG | 3 cut(s) | 291, 951, 1628 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1439, 1471 |
| AleI | CACNNNNGTG | 1 cut(s) | 2010 |
| Alw21I | GWGCWC | 1 cut(s) | 1543 |
| Alw26I | GTCTC | 6 cut(s) | 63, 939, 1492, 2017, 2305, 2306 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 860, 1079 |
| Ama87I | CYCGRG | 1 cut(s) | 597 |
| ApeKI | GCWGC | 5 cut(s) | 854, 857, 1216, 1778, 1979 |
| ApoI | RAATTY | 2 cut(s) | 1234, 1661 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 7, 39 |
| AseI | ATTAAT | 1 cut(s) | 1653 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 911 |
| AspS9I | GGNCC | 6 cut(s) | 456, 944, 1095, 1702, 1763, 2093 |
| AsuC2I | CCSGG | 5 cut(s) | 598, 599, 1767, 1865, 1879 |
| AsuHPI | GGTGA | 7 cut(s) | 152, 355, 458, 529, 586, 1997, 2269 |
| AsuNHI | GCTAGC | 1 cut(s) | 122 |
| AvaI | CYCGRG | 1 cut(s) | 597 |
| AvaII | GGWCC | 2 cut(s) | 944, 1702 |
| BaeGI | GKGCMC | 1 cut(s) | 1790 |
| BamHI | GGATCC | 3 cut(s) | 238, 393, 1127 |
| BanII | GRGCYC | 2 cut(s) | 307, 1543 |
| BauI | CACGAG | 1 cut(s) | 475 |
| BbrPI | CACGTG | 1 cut(s) | 453 |
| BbsI | GAAGAC | 1 cut(s) | 1705 |
| Bbv12I | GWGCWC | 1 cut(s) | 1543 |
| BbvCI | CCTCAGC | 1 cut(s) | 2131 |
| BbvI | GCAGC | 5 cut(s) | 866, 869, 1203, 1765, 1991 |
| BccI | CCATC | 9 cut(s) | 140, 178, 955, 989, 1748, 2009, 2228, 2288, 2345 |
| BceAI | ACGGC | 1 cut(s) | 350 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1577, 1611, 2273, 2307 |
| BciT130I | CCWGG | 3 cut(s) | 293, 953, 1630 |
| BciVI | GTATCC | 1 cut(s) | 1628 |
| BclI | TGATCA | 2 cut(s) | 2188, 2274 |
| BcnI | CCSGG | 5 cut(s) | 598, 599, 1767, 1865, 1879 |
| BcoDI | GTCTC | 6 cut(s) | 63, 939, 1492, 2017, 2305, 2306 |
| BfmI | CTRYAG | 3 cut(s) | 509, 2152, 2256 |
| BfuAI | ACCTGC | 1 cut(s) | 128 |
| BfuI | GTATCC | 1 cut(s) | 1628 |
| BisI | GCNGC | 5 cut(s) | 855, 858, 1217, 1779, 1980 |
| BlsI | GCNGC | 5 cut(s) | 856, 859, 1218, 1780, 1981 |
| Bme1390I | CCNGG | 8 cut(s) | 293, 598, 599, 953, 1630, 1767, 1865, 1879 |
| Bme18I | GGWCC | 2 cut(s) | 944, 1702 |
| BmeT110I | CYCGRG | 1 cut(s) | 597 |
| BmgT120I | GGNCC | 6 cut(s) | 456, 944, 1095, 1702, 1763, 2093 |
| BmiI | GGNNCC | 5 cut(s) | 240, 395, 1129, 1202, 1876 |
| BmrFI | CCNGG | 8 cut(s) | 293, 598, 599, 953, 1630, 1767, 1865, 1879 |
| BmsI | GCATC | 5 cut(s) | 1141, 1345, 1812, 1909, 1931 |
| BmtI | GCTAGC | 1 cut(s) | 126 |
| BpiI | GAAGAC | 1 cut(s) | 1705 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1700, 1732 |
| Bpu10I | CCTNAGC | 2 cut(s) | 398, 2131 |
| BpuEI | CTTGAG | 1 cut(s) | 917 |
| BpuMI | CCSGG | 5 cut(s) | 598, 599, 1767, 1865, 1879 |
| BsaAI | YACGTR | 1 cut(s) | 453 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2279 |
| BsaHI | GRCGYC | 1 cut(s) | 2262 |
| BsaJI | CCNNGG | 7 cut(s) | 366, 597, 951, 1098, 1629, 1790, 1878 |
| BsaWI | WCCGGW | 1 cut(s) | 1385 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 834, 864 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 325, 546, 628, 1122, 1760, 1870 |
| Bse1I | ACTGG | 3 cut(s) | 275, 1055, 2109 |
| Bse3DI | GCAATG | 1 cut(s) | 1152 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2279 |
| BseBI | CCWGG | 3 cut(s) | 293, 953, 1630 |
| BseDI | CCNNGG | 7 cut(s) | 366, 597, 951, 1098, 1629, 1790, 1878 |
| BseGI | GGATG | 7 cut(s) | 103, 947, 1108, 1156, 1313, 1360, 1827 |
| BseJI | GATNNNNATC | 1 cut(s) | 2279 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 325, 546, 628, 1122, 1760, 1870 |
| BseMI | GCAATG | 1 cut(s) | 1152 |
| BseMII | CTCAG | 6 cut(s) | 171, 651, 1731, 1817, 2012, 2145 |
| BseNI | ACTGG | 3 cut(s) | 275, 1055, 2109 |
| BseRI | GAGGAG | 4 cut(s) | 278, 572, 858, 1208 |
| BseSI | GKGCMC | 1 cut(s) | 1790 |
| BseXI | GCAGC | 5 cut(s) | 866, 869, 1203, 1765, 1991 |
| BseYI | CCCAGC | 3 cut(s) | 622, 1016, 2205 |
| BsgI | GTGCAG | 3 cut(s) | 299, 1392, 1827 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1543 |
| BsiHKCI | CYCGRG | 1 cut(s) | 597 |
| BsiSI | CCGG | 5 cut(s) | 598, 1386, 1766, 1864, 1878 |
| BslFI | GGGAC | 5 cut(s) | 427, 662, 1244, 1345, 2053 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 325, 546, 628, 1122, 1760, 1870 |
| BsmAI | GTCTC | 6 cut(s) | 63, 939, 1492, 2017, 2305, 2306 |
| BsmBI | CGTCTC | 1 cut(s) | 939 |
| BsmFI | GGGAC | 5 cut(s) | 427, 662, 1244, 1345, 2053 |
| BsmI | GAATGC | 1 cut(s) | 978 |
| BsoBI | CYCGRG | 1 cut(s) | 597 |
| Bsp1286I | GDGCHC | 3 cut(s) | 307, 1543, 1790 |
| Bsp19I | CCATGG | 1 cut(s) | 1790 |
| BspACI | CCGC | 5 cut(s) | 236, 1299, 2008, 2082, 2183 |
| BspCNI | CTCAG | 6 cut(s) | 172, 652, 1730, 1818, 2013, 2144 |
| BspLI | GGNNCC | 5 cut(s) | 240, 395, 1129, 1202, 1876 |
| BspMAI | CTGCAG | 1 cut(s) | 513 |
| BspMI | ACCTGC | 1 cut(s) | 128 |
| BspOI | GCTAGC | 1 cut(s) | 126 |
| BspQI | GCTCTTC | 1 cut(s) | 1894 |
| BsrDI | GCAATG | 1 cut(s) | 1152 |
| BsrI | ACTGG | 3 cut(s) | 275, 1055, 2109 |
| BssECI | CCNNGG | 7 cut(s) | 366, 597, 951, 1098, 1629, 1790, 1878 |
| BssNI | GRCGYC | 1 cut(s) | 2262 |
| BssSI | CACGAG | 1 cut(s) | 475 |
| BssT1I | CCWWGG | 2 cut(s) | 1098, 1790 |
| Bst2BI | CACGAG | 1 cut(s) | 475 |
| Bst2UI | CCWGG | 3 cut(s) | 293, 953, 1630 |
| Bst4CI | ACNGT | 5 cut(s) | 963, 991, 1027, 2300, 2340 |
| Bst6I | CTCTTC | 6 cut(s) | 341, 488, 678, 699, 1894, 2055 |
| BstACI | GRCGYC | 1 cut(s) | 2262 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1151 |
| BstBAI | YACGTR | 1 cut(s) | 453 |
| BstC8I | GCNNGC | 7 cut(s) | 43, 124, 199, 552, 1060, 1906, 1959 |
| BstDEI | CTNAG | 9 cut(s) | 180, 398, 660, 1717, 1826, 1964, 2021, 2131, 2327 |
| BstDSI | CCRYGG | 2 cut(s) | 366, 1790 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1758 |
| BstF5I | GGATG | 7 cut(s) | 103, 947, 1108, 1156, 1313, 1360, 1827 |
| BstMAI | GTCTC | 6 cut(s) | 63, 939, 1492, 2017, 2305, 2306 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 302, 632, 866, 1151, 1538, 1985, 2007 |
| BstNI | CCWGG | 3 cut(s) | 293, 953, 1630 |
| BstNSI | RCATGY | 2 cut(s) | 1536, 1850 |
| BstSCI | CCNGG | 8 cut(s) | 291, 596, 597, 951, 1628, 1765, 1863, 1877 |
| BstSFI | CTRYAG | 3 cut(s) | 509, 2152, 2256 |
| BstSLI | GKGCMC | 1 cut(s) | 1790 |
| BstV1I | GCAGC | 5 cut(s) | 866, 869, 1203, 1765, 1991 |
| BstV2I | GAAGAC | 1 cut(s) | 1705 |
| BstX2I | RGATCY | 4 cut(s) | 238, 393, 570, 1127 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 299 |
| BstYI | RGATCY | 4 cut(s) | 238, 393, 570, 1127 |
| BsuI | GTATCC | 1 cut(s) | 1628 |
| BtgI | CCRYGG | 2 cut(s) | 366, 1790 |
| BtsCI | GGATG | 7 cut(s) | 103, 947, 1108, 1156, 1313, 1360, 1827 |
| BtsI | GCAGTG | 4 cut(s) | 915, 1365, 1380, 2017 |
| BtsIMutI | CAGTG | 6 cut(s) | 282, 915, 1365, 1380, 2017, 2102 |
| BveI | ACCTGC | 1 cut(s) | 128 |
| Cac8I | GCNNGC | 7 cut(s) | 43, 124, 199, 552, 1060, 1906, 1959 |
| CaiI | CAGNNNCTG | 2 cut(s) | 860, 1079 |
| Cfr13I | GGNCC | 6 cut(s) | 456, 944, 1095, 1702, 1763, 2093 |
| Cfr9I | CCCGGG | 1 cut(s) | 597 |
| CseI | GACGC | 3 cut(s) | 190, 909, 2251 |
| Csp6I | GTAC | 2 cut(s) | 721, 1135 |
| CviQI | GTAC | 2 cut(s) | 721, 1135 |
| DdeI | CTNAG | 9 cut(s) | 180, 398, 660, 1717, 1826, 1964, 2021, 2131, 2327 |
| Eam1104I | CTCTTC | 6 cut(s) | 341, 488, 678, 699, 1894, 2055 |
| EarI | CTCTTC | 6 cut(s) | 341, 488, 678, 699, 1894, 2055 |
| EciI | GGCGGA | 1 cut(s) | 251 |
| Ecl136II | GAGCTC | 1 cut(s) | 1541 |
| Eco130I | CCWWGG | 2 cut(s) | 1098, 1790 |
| Eco147I | AGGCCT | 4 cut(s) | 691, 765, 1242, 2220 |
| Eco24I | GRGCYC | 2 cut(s) | 307, 1543 |
| Eco32I | GATATC | 1 cut(s) | 644 |
| Eco47I | GGWCC | 2 cut(s) | 944, 1702 |
| Eco53kI | GAGCTC | 1 cut(s) | 1541 |
| Eco57I | CTGAAG | 1 cut(s) | 1070 |
| Eco72I | CACGTG | 1 cut(s) | 453 |
| Eco88I | CYCGRG | 1 cut(s) | 597 |
| EcoICRI | GAGCTC | 1 cut(s) | 1541 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1758 |
| EcoRI | GAATTC | 1 cut(s) | 1661 |
| EcoRII | CCWGG | 3 cut(s) | 291, 951, 1628 |
| EcoRV | GATATC | 1 cut(s) | 644 |
| EcoT14I | CCWWGG | 2 cut(s) | 1098, 1790 |
| EcoT22I | ATGCAT | 1 cut(s) | 1924 |
| EcoT38I | GRGCYC | 2 cut(s) | 307, 1543 |
| ErhI | CCWWGG | 2 cut(s) | 1098, 1790 |
| Esp3I | CGTCTC | 1 cut(s) | 939 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 762, 794, 1100, 1132, 1439, 1471 |
| FaqI | GGGAC | 5 cut(s) | 427, 662, 1244, 1345, 2053 |
| FbaI | TGATCA | 2 cut(s) | 2188, 2274 |
| Fnu4HI | GCNGC | 5 cut(s) | 855, 858, 1217, 1779, 1980 |
| FokI | GGATG | 7 cut(s) | 90, 934, 1115, 1163, 1320, 1367, 1834 |
| FriOI | GRGCYC | 2 cut(s) | 307, 1543 |
| Fsp4HI | GCNGC | 5 cut(s) | 855, 858, 1217, 1779, 1980 |
| GluI | GCNGC | 5 cut(s) | 855, 858, 1217, 1779, 1980 |
| GsaI | CCCAGC | 3 cut(s) | 626, 1020, 2209 |
| HapII | CCGG | 5 cut(s) | 598, 1386, 1766, 1864, 1878 |
| HgaI | GACGC | 3 cut(s) | 190, 909, 2251 |
| Hin1I | GRCGYC | 1 cut(s) | 2262 |
| HincII | GTYRAC | 2 cut(s) | 1023, 1048 |
| HindII | GTYRAC | 2 cut(s) | 1023, 1048 |
| HindIII | AAGCTT | 1 cut(s) | 1906 |
| HpaI | GTTAAC | 1 cut(s) | 1048 |
| HpaII | CCGG | 5 cut(s) | 598, 1386, 1766, 1864, 1878 |
| HphI | GGTGA | 7 cut(s) | 152, 355, 458, 529, 586, 1997, 2269 |
| Hpy166II | GTNNAC | 5 cut(s) | 466, 1023, 1048, 1252, 1574 |
| Hpy188I | TCNGA | 9 cut(s) | 56, 925, 1132, 1276, 1660, 1927, 1974, 2193, 2271 |
| Hpy188III | TCNNGA | 7 cut(s) | 568, 896, 938, 972, 1088, 1800, 1836 |
| Hpy8I | GTNNAC | 5 cut(s) | 466, 1023, 1048, 1252, 1574 |
| Hpy99I | CGWCG | 1 cut(s) | 925 |
| HpyCH4III | ACNGT | 5 cut(s) | 963, 991, 1027, 2300, 2340 |
| HpyCH4IV | ACGT | 2 cut(s) | 452, 1137 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 302, 632, 866, 1151, 1538, 1985, 2007 |
| HpyF3I | CTNAG | 9 cut(s) | 180, 398, 660, 1717, 1826, 1964, 2021, 2131, 2327 |
| HpySE526I | ACGT | 2 cut(s) | 452, 1137 |
| Hsp92I | GRCGYC | 1 cut(s) | 2262 |
| Ksp22I | TGATCA | 2 cut(s) | 2188, 2274 |
| KspAI | GTTAAC | 1 cut(s) | 1048 |
| LguI | GCTCTTC | 1 cut(s) | 1894 |
| LmnI | GCTCC | 4 cut(s) | 119, 265, 1538, 1985 |
| Lsp1109I | GCAGC | 5 cut(s) | 866, 869, 1203, 1765, 1991 |
| LweI | GCATC | 5 cut(s) | 1141, 1345, 1812, 1909, 1931 |
| MaeII | ACGT | 2 cut(s) | 452, 1137 |
| MaeIII | GTNAC | 5 cut(s) | 29, 446, 772, 1174, 1519 |
| MflI | RGATCY | 4 cut(s) | 238, 393, 570, 1127 |
| MhlI | GDGCHC | 3 cut(s) | 307, 1543, 1790 |
| MluCI | AATT | 8 cut(s) | 49, 822, 1234, 1267, 1506, 1524, 1654, 1661 |
| MlyI | GAGTC | 8 cut(s) | 197, 409, 684, 776, 1070, 1640, 1718, 2019 |
| MmeI | TCCRAC | 1 cut(s) | 903 |
| Mph1103I | ATGCAT | 1 cut(s) | 1924 |
| MroXI | GAANNNNTTC | 1 cut(s) | 911 |
| MseI | TTAA | 3 cut(s) | 1047, 1559, 1653 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1287, 2010 |
| MspA1I | CMGCKG | 2 cut(s) | 179, 860 |
| MspI | CCGG | 5 cut(s) | 598, 1386, 1766, 1864, 1878 |
| MspR9I | CCNGG | 8 cut(s) | 293, 598, 599, 953, 1630, 1767, 1865, 1879 |
| Mva1269I | GAATGC | 1 cut(s) | 978 |
| MvaI | CCWGG | 3 cut(s) | 293, 953, 1630 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 302, 632, 866, 1151, 1538, 1985, 2007 |
| NciI | CCSGG | 5 cut(s) | 598, 599, 1767, 1865, 1879 |
| NcoI | CCATGG | 1 cut(s) | 1790 |
| NheI | GCTAGC | 1 cut(s) | 122 |
| NlaIV | GGNNCC | 5 cut(s) | 240, 395, 1129, 1202, 1876 |
| NmeAIII | GCCGAG | 1 cut(s) | 1423 |
| NmuCI | GTSAC | 3 cut(s) | 29, 446, 772 |
| NsiI | ATGCAT | 1 cut(s) | 1924 |
| NspI | RCATGY | 2 cut(s) | 1536, 1850 |
| OliI | CACNNNNGTG | 1 cut(s) | 2010 |
| PaqCI | CACCTGC | 1 cut(s) | 128 |
| PceI | AGGCCT | 4 cut(s) | 691, 765, 1242, 2220 |
| PciI | ACATGT | 1 cut(s) | 1846 |
| PciSI | GCTCTTC | 1 cut(s) | 1894 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 929, 1128 |
| PctI | GAATGC | 1 cut(s) | 978 |
| PdmI | GAANNNNTTC | 1 cut(s) | 911 |
| PfoI | TCCNGGA | 1 cut(s) | 1863 |
| PkrI | GCNGC | 5 cut(s) | 856, 859, 1218, 1780, 1981 |
| PleI | GAGTC | 8 cut(s) | 196, 409, 683, 776, 1070, 1640, 1718, 2019 |
| PmaCI | CACGTG | 1 cut(s) | 453 |
| PmlI | CACGTG | 1 cut(s) | 453 |
| PpsI | GAGTC | 8 cut(s) | 196, 409, 683, 776, 1070, 1640, 1718, 2019 |
| Ppu21I | YACGTR | 1 cut(s) | 453 |
| PscI | ACATGT | 1 cut(s) | 1846 |
| PshBI | ATTAAT | 1 cut(s) | 1653 |
| Psp124BI | GAGCTC | 1 cut(s) | 1543 |
| Psp6I | CCWGG | 3 cut(s) | 291, 951, 1628 |
| PspCI | CACGTG | 1 cut(s) | 453 |
| PspFI | CCCAGC | 3 cut(s) | 622, 1016, 2205 |
| PspGI | CCWGG | 3 cut(s) | 291, 951, 1628 |
| PspN4I | GGNNCC | 5 cut(s) | 240, 395, 1129, 1202, 1876 |
| PspPI | GGNCC | 6 cut(s) | 456, 944, 1095, 1702, 1763, 2093 |
| PstI | CTGCAG | 1 cut(s) | 513 |
| PstNI | CAGNNNCTG | 2 cut(s) | 860, 1079 |
| PsuI | RGATCY | 4 cut(s) | 238, 393, 570, 1127 |
| PvuII | CAGCTG | 2 cut(s) | 179, 860 |
| RsaI | GTAC | 2 cut(s) | 722, 1136 |
| RsaNI | GTAC | 2 cut(s) | 721, 1135 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1287, 2010 |
| SacI | GAGCTC | 1 cut(s) | 1543 |
| SapI | GCTCTTC | 1 cut(s) | 1894 |
| SaqAI | TTAA | 3 cut(s) | 1047, 1559, 1653 |
| SatI | GCNGC | 5 cut(s) | 855, 858, 1217, 1779, 1980 |
| Sau96I | GGNCC | 6 cut(s) | 456, 944, 1095, 1702, 1763, 2093 |
| SchI | GAGTC | 8 cut(s) | 197, 409, 684, 776, 1070, 1640, 1718, 2019 |
| ScrFI | CCNGG | 8 cut(s) | 293, 598, 599, 953, 1630, 1767, 1865, 1879 |
| SduI | GDGCHC | 3 cut(s) | 307, 1543, 1790 |
| SfaNI | GCATC | 5 cut(s) | 1141, 1345, 1812, 1909, 1931 |
| SfcI | CTRYAG | 3 cut(s) | 509, 2152, 2256 |
| SinI | GGWCC | 2 cut(s) | 944, 1702 |
| SmaI | CCCGGG | 1 cut(s) | 599 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1287, 2010 |
| SmlI | CTYRAG | 1 cut(s) | 896 |
| SmoI | CTYRAG | 1 cut(s) | 896 |
| Sse9I | AATT | 8 cut(s) | 49, 822, 1234, 1267, 1506, 1524, 1654, 1661 |
| SseBI | AGGCCT | 4 cut(s) | 691, 765, 1242, 2220 |
| SsiI | CCGC | 5 cut(s) | 236, 1299, 2008, 2082, 2183 |
| SstI | GAGCTC | 1 cut(s) | 1543 |
| StuI | AGGCCT | 4 cut(s) | 691, 765, 1242, 2220 |
| StyD4I | CCNGG | 8 cut(s) | 291, 596, 597, 951, 1628, 1765, 1863, 1877 |
| StyI | CCWWGG | 2 cut(s) | 1098, 1790 |
| TaaI | ACNGT | 5 cut(s) | 963, 991, 1027, 2300, 2340 |
| TaiI | ACGT | 2 cut(s) | 455, 1140 |
| TaqI | TCGA | 4 cut(s) | 6, 1597, 1649, 2283 |
| TaqII | GACCGA | 1 cut(s) | 1690 |
| TasI | AATT | 8 cut(s) | 49, 822, 1234, 1267, 1506, 1524, 1654, 1661 |
| Tru1I | TTAA | 3 cut(s) | 1047, 1559, 1653 |
| Tru9I | TTAA | 3 cut(s) | 1047, 1559, 1653 |
| TscAI | CASTG | 6 cut(s) | 282, 922, 1365, 1380, 2017, 2109 |
| TseFI | GTSAC | 3 cut(s) | 29, 446, 772 |
| TseI | GCWGC | 5 cut(s) | 854, 857, 1216, 1778, 1979 |
| Tsp45I | GTSAC | 3 cut(s) | 29, 446, 772 |
| TspDTI | ATGAA | 7 cut(s) | 621, 981, 1119, 1595, 1955, 2103, 2184 |
| TspMI | CCCGGG | 1 cut(s) | 597 |
| TspRI | CASTG | 6 cut(s) | 282, 922, 1365, 1380, 2017, 2109 |
| VpaK11BI | GGWCC | 2 cut(s) | 944, 1702 |
| VspI | ATTAAT | 1 cut(s) | 1653 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1758 |
| XapI | RAATTY | 2 cut(s) | 1234, 1661 |
| XceI | RCATGY | 2 cut(s) | 1536, 1850 |
| XmaI | CCCGGG | 1 cut(s) | 597 |
| XmnI | GAANNNNTTC | 1 cut(s) | 911 |
| Zsp2I | ATGCAT | 1 cut(s) | 1924 |