RLG00000009705

Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
56726102 .. 56731955
5854 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009705

Sequence Viewer

Length: 2286 bp
ATGAGAAATAAGGAGTGTCATCCATTGTTGAGTGGAGCTAGCAGAGGATCAGCAGGTGAAGATGGAAGGTCATACAAACATGGGTTATCATCAGCTGAGATGGAGTCTTTGGCAAGCGTCTGCGAGGCTTTATTTCCTCCTTTGCCATTGGCGGATCCTAGTAATTTTGAAGGGAAGGAGGAGGAGCTATCTGGAAATAAGGCTGTGCAGTCCTTCTACCAGGCTTCTGGGGCCCAAACTGGAATCCCAGATGAGGTTGCAGAGCTATTGGTGAAGAGGGGTTTTATGGAAGCCGTGGTTCTCGTTAGAGTGGTTTTATGGATCCTAAGCAGTAGGTTGGGGACTCTACTGCTCTGTGGTTCTCTTTGCTTGGGTGACACGTGGCCCTTCGTTTACAAGTTCTCATGTCTGCCATTGGAGAAGAGAGAGAGGGTTCTGCAGAGGTGGTTCAGGCATAGGTTTCTCACCCCTATTAGGCTTGCTTTTCTTTACATCAAGATCCTTTGCCTTCTCATTTTCTTCACCCGGGTTGATGAAAATGCTGAAAACCCAACATGGGAAGCCATTGGATATCAAGTAGAACCAGCTGAGAACCCGAAAAGAGTCCCAGAAGAGAGGCCTCTTCACAAGAGAATCATAGAAACCATGTACCAAACTGACACTAGCCTTCTGGATTCTCTTGCCGACAAAGGCCTCAAAGTCACAGTTGACTCCAAAAACAACCTCTACAAGATCAAATGTGATGTGGTAATTGTTGGCTCTGGCTGTGGAGGAGGTGTTGCAGCAGCAGTTCTAGCAAGTTCAGGCCAGAAAGTGATTGTTCTTGAGAAAGGGAACTACTTCACTGCGTCGGATTACTCGTCTCTGGAAGGTCCATCCCAGGATCAACTGTATGAATCAGGAGGCATTCTTGCAACTATTGATGGGAAAGTAATGATTCAGGCTGGGTCAACAGTTGGTGGTGGCTCTGCTGTTAACTGGTCAGCCTGCATTAGAACACCAGACTTTTTGCTTCAGGAATGGGCCAAGGATCAAAAGATTGCCTTCTTCGGGGGATCCGAATACGTTTCTGCAATGGATGCTGTGTGTGAGAGAATCGGGGTTACAGAGAGCTGTGTAGAGGAGGGGTTCCAAAATCAAGTGCTGCGAAAAGGGTGTGAAAATTTAGGCCTTGCAGTTCACTTTGCCCCTCGCAATTCTTCGGAGAAGCATTATTGTGGATCGTGCGGTTATGGATGTACGAAAGGAGAGAAAAAGGGGACAGATTCTACATGGCTGGTGGATGCTGTGGATCATGGTGCAGTGATCTTATCCGGTTGCAAAGCCGAGAGATTTGTATTGGAAAAGAGCTACAAGAGTGGAAGTATAAGGAAGAAGAAATGCTTGGGAGTAATGGCAAGAAGTTTATGTAACAACATAACAAAGAGACTGCAAATTGAGGCAAAAGTAACAATTTCAGCTTGTGGAGCTCTTTTGACACCTCCCTTAATGATCTCTAGTGGACTAAAGAACCGGCACATTGGTCGAAATCTTCATCTCCACCCTGTCCTAATGGCCTGGGGATACTTCCCTGACTCGATTAATTCAGAATTCAAGGGTAAAAGCTATGAGGGTGGAATAATCACATCGGTCCATGAGGTCGCCTCAGCAGACTCTAGGCCAAGAGCCATCATTGAAACTCCTGCATTAGGGCCTGGAACATTTGCTGCTTTGTGCCCCTGGGTGTCTGGACTAGACATAAAGAAAAGGATGTTGAGATTTTCAAGAACTGCACATGTGATTGTAATAATCCGGGATAAGGGTTCCGGGGTTGTTAGGACAGAGGGAAGAGCAAGCTTTGAGCTTGATGCATCAGACAAAGAGAACATGAACGCTGGTTTGAGGCAGGCACTTAGGATTCTGATAGCAGCAGGAGCAGTTGAAGTTGGCACTCACCGCAGTGATGGGCTGAGACTCAAATGTGAAGGGACTGATAAGAAGGAACTAGAGGAGTTTTTGGACGAAGTTTCTGCAGATGAAGGGCCACAATCACTGGTAGAGAAATGGACAACCTATTCCTCAGCTCATCAAATGGGGAGCTGTAGAATGGGAATCAATGAAAAAGAAGGTGCGGTTGATCAGAATGGGGAGAGCTGGGAAGCCGAAGGCCTATTCGTCTGTGATGGTAGTGTGTTGCCTAGTGCTGTTGGCGTCAATCCGATGATCACCATCGAATCAACTGCTTACTGTCTCTCAAAGAGACTAGCAGAATCTCTAAGAAAACAACAGTTTTACAATGATGGTTGA

Protein Analysis

762

Amino Acids

82.98

Weight (kDa)

6.57

Isoelectric Point (pI)

38.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 295 - 516 8.3e-75 GMC oxidoreductase
GMC_oxred_C PF05199 613 - 738 8.1e-23 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010757)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 44
Acc36I ACCTGC 1 cut(s) 44
AciI CCGC 4 cut(s) 152, 1227, 1936, 2111
AcsI RAATTY 2 cut(s) 1162, 1589
AcuI CTGAAG 1 cut(s) 998
AcvI CACGTG 1 cut(s) 381
AcyI GRCGYC 1 cut(s) 2190
AfaI GTAC 2 cut(s) 650, 1240
AfiI CCNNNNNNNGG 6 cut(s) 253, 474, 556, 1050, 1688, 1798
AflIII ACRYGT 2 cut(s) 378, 1774
AgsI TTSAA 5 cut(s) 170, 1594, 1676, 1764, 1922
AjnI CCWGG 5 cut(s) 219, 879, 1556, 1693, 1718
AjuI GAANNNNNNNTTGG 2 cut(s) 1367, 1399
AleI CACNNNNGTG 1 cut(s) 1938
Alw21I GWGCWC 1 cut(s) 1471
Alw26I GTCTC 5 cut(s) 867, 1420, 1945, 2233, 2234
Ama87I CYCGRG 1 cut(s) 525
ApaI GGGCCC 1 cut(s) 235
ApeKI GCWGC 5 cut(s) 782, 785, 1144, 1706, 1907
ApoI RAATTY 2 cut(s) 1162, 1589
AseI ATTAAT 1 cut(s) 1581
Asp700I GAANNNNTTC 1 cut(s) 839
AspS9I GGNCC 8 cut(s) 231, 232, 384, 872, 1023, 1630, 1691, 2021
AsuC2I CCSGG 4 cut(s) 526, 527, 1793, 1807
AsuHPI GGTGA 7 cut(s) 68, 283, 386, 457, 514, 1925, 2197
AsuNHI GCTAGC 1 cut(s) 38
AvaI CYCGRG 1 cut(s) 525
AvaII GGWCC 2 cut(s) 872, 1630
BaeGI GKGCMC 2 cut(s) 235, 1718
BamHI GGATCC 3 cut(s) 154, 321, 1055
BanII GRGCYC 2 cut(s) 235, 1471
BbrPI CACGTG 1 cut(s) 381
Bbv12I GWGCWC 1 cut(s) 1471
BbvCI CCTCAGC 2 cut(s) 1645, 2059
BbvI GCAGC 5 cut(s) 794, 797, 1131, 1693, 1919
BccI CCATC 9 cut(s) 56, 94, 883, 917, 1676, 1937, 2156, 2216, 2273
BceAI ACGGC 1 cut(s) 278
BcgI CGANNNNNNTGC 6 cut(s) 1505, 1539, 1991, 2025, 2201, 2235
BciT130I CCWGG 5 cut(s) 221, 881, 1558, 1695, 1720
BciVI GTATCC 1 cut(s) 1556
BclI TGATCA 2 cut(s) 2116, 2202
BcnI CCSGG 4 cut(s) 526, 527, 1793, 1807
BcoDI GTCTC 5 cut(s) 867, 1420, 1945, 2233, 2234
BfmI CTRYAG 3 cut(s) 437, 2010, 2080
BfuAI ACCTGC 1 cut(s) 44
BfuI GTATCC 1 cut(s) 1556
BisI GCNGC 5 cut(s) 783, 786, 1145, 1707, 1908
BlsI GCNGC 5 cut(s) 784, 787, 1146, 1708, 1909
Bme1390I CCNGG 9 cut(s) 221, 526, 527, 881, 1558, 1695, 1720, 1793, 1807
Bme18I GGWCC 2 cut(s) 872, 1630
BmeT110I CYCGRG 1 cut(s) 525
BmgT120I GGNCC 8 cut(s) 231, 232, 384, 872, 1023, 1630, 1691, 2021
BmiI GGNNCC 7 cut(s) 156, 232, 233, 323, 1057, 1130, 1804
BmrFI CCNGG 9 cut(s) 221, 526, 527, 881, 1558, 1695, 1720, 1793, 1807
BmsI GCATC 4 cut(s) 1069, 1273, 1837, 1859
BmtI GCTAGC 1 cut(s) 42
BplI GAGNNNNNCTC 2 cut(s) 1628, 1660
Bpu10I CCTNAGC 3 cut(s) 326, 1645, 2059
BpuEI CTTGAG 1 cut(s) 845
BpuMI CCSGG 4 cut(s) 526, 527, 1793, 1807
BsaAI YACGTR 1 cut(s) 381
BsaBI GATNNNNATC 1 cut(s) 2207
BsaHI GRCGYC 1 cut(s) 2190
BsaJI CCNNGG 8 cut(s) 294, 525, 879, 1026, 1557, 1718, 1719, 1806
BsaWI WCCGGW 1 cut(s) 1313
BsaXI ACNNNNNCTCC 2 cut(s) 762, 792
Bsc4I CCNNNNNNNGG 6 cut(s) 253, 474, 556, 1050, 1688, 1798
Bse118I RCCGGY 1 cut(s) 1512
Bse1I ACTGG 3 cut(s) 244, 983, 2037
Bse3DI GCAATG 1 cut(s) 1080
Bse8I GATNNNNATC 1 cut(s) 2207
BseBI CCWGG 5 cut(s) 221, 881, 1558, 1695, 1720
BseDI CCNNGG 8 cut(s) 294, 525, 879, 1026, 1557, 1718, 1719, 1806
BseGI GGATG 6 cut(s) 19, 875, 1084, 1241, 1288, 1755
BseJI GATNNNNATC 1 cut(s) 2207
BseLI CCNNNNNNNGG 6 cut(s) 253, 474, 556, 1050, 1688, 1798
BseMI GCAATG 1 cut(s) 1080
BseMII CTCAG 5 cut(s) 87, 579, 1659, 1940, 2073
BseNI ACTGG 3 cut(s) 244, 983, 2037
BseRI GAGGAG 5 cut(s) 194, 197, 786, 1136, 2003
BseSI GKGCMC 2 cut(s) 235, 1718
BseXI GCAGC 5 cut(s) 794, 797, 1131, 1693, 1919
BseYI CCCAGC 2 cut(s) 944, 2133
BsgI GTGCAG 3 cut(s) 227, 1320, 1755
BsiHKAI GWGCWC 1 cut(s) 1471
BsiHKCI CYCGRG 1 cut(s) 525
BsiSI CCGG 5 cut(s) 526, 1314, 1513, 1792, 1806
BslFI GGGAC 4 cut(s) 355, 590, 1273, 1981
BslI CCNNNNNNNGG 6 cut(s) 253, 474, 556, 1050, 1688, 1798
BsmAI GTCTC 5 cut(s) 867, 1420, 1945, 2233, 2234
BsmBI CGTCTC 1 cut(s) 867
BsmFI GGGAC 4 cut(s) 355, 590, 1273, 1981
BsmI GAATGC 1 cut(s) 906
BsoBI CYCGRG 1 cut(s) 525
Bsp120I GGGCCC 1 cut(s) 231
Bsp1286I GDGCHC 3 cut(s) 235, 1471, 1718
BspACI CCGC 4 cut(s) 152, 1227, 1936, 2111
BspCNI CTCAG 5 cut(s) 88, 580, 1658, 1941, 2072
BspLI GGNNCC 7 cut(s) 156, 232, 233, 323, 1057, 1130, 1804
BspMAI CTGCAG 2 cut(s) 441, 2014
BspMI ACCTGC 1 cut(s) 44
BspOI GCTAGC 1 cut(s) 42
BspQI GCTCTTC 1 cut(s) 1822
BsrDI GCAATG 1 cut(s) 1080
BsrFI RCCGGY 1 cut(s) 1512
BsrI ACTGG 3 cut(s) 244, 983, 2037
BssAI RCCGGY 1 cut(s) 1512
BssECI CCNNGG 8 cut(s) 294, 525, 879, 1026, 1557, 1718, 1719, 1806
BssNI GRCGYC 1 cut(s) 2190
BssT1I CCWWGG 1 cut(s) 1026
Bst2UI CCWGG 5 cut(s) 221, 881, 1558, 1695, 1720
Bst4CI ACNGT 5 cut(s) 706, 891, 955, 2228, 2268
Bst6I CTCTTC 5 cut(s) 269, 416, 606, 627, 1822
BstACI GRCGYC 1 cut(s) 2190
BstAPI GCANNNNNTGC 1 cut(s) 1079
BstBAI YACGTR 1 cut(s) 381
BstC8I GCNNGC 6 cut(s) 40, 115, 480, 988, 1834, 1887
BstDEI CTNAG 8 cut(s) 96, 326, 588, 1645, 1892, 1949, 2059, 2255
BstDSI CCRYGG 1 cut(s) 294
BstENI CCTNNNNNAGG 1 cut(s) 1686
BstF5I GGATG 6 cut(s) 19, 875, 1084, 1241, 1288, 1755
BstMAI GTCTC 5 cut(s) 867, 1420, 1945, 2233, 2234
BstMWI GCNNNNNNNGC 6 cut(s) 230, 794, 1079, 1466, 1913, 1935
BstNI CCWGG 5 cut(s) 221, 881, 1558, 1695, 1720
BstNSI RCATGY 1 cut(s) 1778
BstSCI CCNGG 9 cut(s) 219, 524, 525, 879, 1556, 1693, 1718, 1791, 1805
BstSFI CTRYAG 3 cut(s) 437, 2010, 2080
BstSLI GKGCMC 2 cut(s) 235, 1718
BstV1I GCAGC 5 cut(s) 794, 797, 1131, 1693, 1919
BstX2I RGATCY 4 cut(s) 154, 321, 498, 1055
BstXI CCANNNNNNTGG 1 cut(s) 227
BstYI RGATCY 4 cut(s) 154, 321, 498, 1055
BsuI GTATCC 1 cut(s) 1556
BtgI CCRYGG 1 cut(s) 294
BtsCI GGATG 6 cut(s) 19, 875, 1084, 1241, 1288, 1755
BtsI GCAGTG 3 cut(s) 843, 1308, 1945
BtsIMutI CAGTG 4 cut(s) 843, 1308, 1945, 2030
BveI ACCTGC 1 cut(s) 44
Cac8I GCNNGC 6 cut(s) 40, 115, 480, 988, 1834, 1887
Cfr10I RCCGGY 1 cut(s) 1512
Cfr13I GGNCC 8 cut(s) 231, 232, 384, 872, 1023, 1630, 1691, 2021
Cfr9I CCCGGG 1 cut(s) 525
CseI GACGC 3 cut(s) 106, 837, 2179
Csp6I GTAC 2 cut(s) 649, 1239
CviAII CATG 9 cut(s) 80, 405, 555, 646, 1272, 1295, 1634, 1775, 1867
CviQI GTAC 2 cut(s) 649, 1239
DdeI CTNAG 8 cut(s) 96, 326, 588, 1645, 1892, 1949, 2059, 2255
Eam1104I CTCTTC 5 cut(s) 269, 416, 606, 627, 1822
EarI CTCTTC 5 cut(s) 269, 416, 606, 627, 1822
EciI GGCGGA 1 cut(s) 167
Ecl136II GAGCTC 1 cut(s) 1469
Eco130I CCWWGG 1 cut(s) 1026
Eco147I AGGCCT 4 cut(s) 619, 693, 1170, 2148
Eco24I GRGCYC 2 cut(s) 235, 1471
Eco32I GATATC 1 cut(s) 572
Eco47I GGWCC 2 cut(s) 872, 1630
Eco53kI GAGCTC 1 cut(s) 1469
Eco57I CTGAAG 1 cut(s) 998
Eco72I CACGTG 1 cut(s) 381
Eco88I CYCGRG 1 cut(s) 525
EcoICRI GAGCTC 1 cut(s) 1469
EcoNI CCTNNNNNAGG 1 cut(s) 1686
EcoO109I RGGNCCY 2 cut(s) 231, 1691
EcoRI GAATTC 1 cut(s) 1589
EcoRII CCWGG 5 cut(s) 219, 879, 1556, 1693, 1718
EcoRV GATATC 1 cut(s) 572
EcoT14I CCWWGG 1 cut(s) 1026
EcoT22I ATGCAT 1 cut(s) 1852
EcoT38I GRGCYC 2 cut(s) 235, 1471
ErhI CCWWGG 1 cut(s) 1026
Esp3I CGTCTC 1 cut(s) 867
FaeI CATG 9 cut(s) 83, 408, 558, 649, 1275, 1298, 1637, 1778, 1870
FalI AAGNNNNNCTT 4 cut(s) 1028, 1060, 1367, 1399
FaqI GGGAC 4 cut(s) 355, 590, 1273, 1981
FatI CATG 9 cut(s) 79, 404, 554, 645, 1271, 1294, 1633, 1774, 1866
FbaI TGATCA 2 cut(s) 2116, 2202
Fnu4HI GCNGC 5 cut(s) 783, 786, 1145, 1707, 1908
FokI GGATG 6 cut(s) 6, 862, 1091, 1248, 1295, 1762
FriOI GRGCYC 2 cut(s) 235, 1471
Fsp4HI GCNGC 5 cut(s) 783, 786, 1145, 1707, 1908
GluI GCNGC 5 cut(s) 783, 786, 1145, 1707, 1908
GsaI CCCAGC 2 cut(s) 948, 2137
HapII CCGG 5 cut(s) 526, 1314, 1513, 1792, 1806
HgaI GACGC 3 cut(s) 106, 837, 2179
Hin1I GRCGYC 1 cut(s) 2190
Hin1II CATG 9 cut(s) 83, 408, 558, 649, 1275, 1298, 1637, 1778, 1870
HincII GTYRAC 3 cut(s) 709, 951, 976
HindII GTYRAC 3 cut(s) 709, 951, 976
HindIII AAGCTT 1 cut(s) 1834
HpaI GTTAAC 1 cut(s) 976
HpaII CCGG 5 cut(s) 526, 1314, 1513, 1792, 1806
HphI GGTGA 7 cut(s) 68, 283, 386, 457, 514, 1925, 2197
Hpy166II GTNNAC 6 cut(s) 394, 709, 951, 976, 1180, 1502
Hpy188I TCNGA 8 cut(s) 853, 1060, 1204, 1588, 1855, 1902, 2121, 2199
Hpy188III TCNNGA 9 cut(s) 192, 496, 671, 824, 866, 900, 1016, 1728, 1764
Hpy8I GTNNAC 6 cut(s) 394, 709, 951, 976, 1180, 1502
Hpy99I CGWCG 1 cut(s) 853
HpyCH4III ACNGT 5 cut(s) 706, 891, 955, 2228, 2268
HpyCH4IV ACGT 2 cut(s) 380, 1065
HpyF10VI GCNNNNNNNGC 6 cut(s) 230, 794, 1079, 1466, 1913, 1935
HpyF3I CTNAG 8 cut(s) 96, 326, 588, 1645, 1892, 1949, 2059, 2255
HpySE526I ACGT 2 cut(s) 380, 1065
Hsp92I GRCGYC 1 cut(s) 2190
Hsp92II CATG 9 cut(s) 83, 408, 558, 649, 1275, 1298, 1637, 1778, 1870
Ksp22I TGATCA 2 cut(s) 2116, 2202
KspAI GTTAAC 1 cut(s) 976
LguI GCTCTTC 1 cut(s) 1822
LmnI GCTCC 5 cut(s) 35, 184, 1466, 1913, 2076
Lsp1109I GCAGC 5 cut(s) 794, 797, 1131, 1693, 1919
LweI GCATC 4 cut(s) 1069, 1273, 1837, 1859
MaeII ACGT 2 cut(s) 380, 1065
MaeIII GTNAC 5 cut(s) 374, 700, 1102, 1409, 1447
MflI RGATCY 4 cut(s) 154, 321, 498, 1055
MhlI GDGCHC 3 cut(s) 235, 1471, 1718
MluCI AATT 8 cut(s) 163, 750, 1162, 1195, 1434, 1452, 1582, 1589
MlyI GAGTC 7 cut(s) 113, 337, 612, 704, 1568, 1646, 1947
MmeI TCCRAC 1 cut(s) 831
Mph1103I ATGCAT 1 cut(s) 1852
MroXI GAANNNNTTC 1 cut(s) 839
MseI TTAA 3 cut(s) 975, 1487, 1581
MslI CAYNNNNRTG 2 cut(s) 1215, 1938
MspA1I CMGCKG 2 cut(s) 95, 587
MspI CCGG 5 cut(s) 526, 1314, 1513, 1792, 1806
MspR9I CCNGG 9 cut(s) 221, 526, 527, 881, 1558, 1695, 1720, 1793, 1807
Mva1269I GAATGC 1 cut(s) 906
MvaI CCWGG 5 cut(s) 221, 881, 1558, 1695, 1720
MwoI GCNNNNNNNGC 6 cut(s) 230, 794, 1079, 1466, 1913, 1935
NciI CCSGG 4 cut(s) 526, 527, 1793, 1807
NheI GCTAGC 1 cut(s) 38
NlaIII CATG 9 cut(s) 83, 408, 558, 649, 1275, 1298, 1637, 1778, 1870
NlaIV GGNNCC 7 cut(s) 156, 232, 233, 323, 1057, 1130, 1804
NmeAIII GCCGAG 1 cut(s) 1351
NmuCI GTSAC 2 cut(s) 374, 700
NsiI ATGCAT 1 cut(s) 1852
NspI RCATGY 1 cut(s) 1778
OliI CACNNNNGTG 1 cut(s) 1938
PaqCI CACCTGC 1 cut(s) 44
PasI CCCWGGG 1 cut(s) 1719
PceI AGGCCT 4 cut(s) 619, 693, 1170, 2148
PciI ACATGT 1 cut(s) 1774
PciSI GCTCTTC 1 cut(s) 1822
PcsI WCGNNNNNNNCGW 2 cut(s) 857, 1056
PctI GAATGC 1 cut(s) 906
PdmI GAANNNNTTC 1 cut(s) 839
PfoI TCCNGGA 1 cut(s) 1791
PkrI GCNGC 5 cut(s) 784, 787, 1146, 1708, 1909
PleI GAGTC 7 cut(s) 112, 337, 611, 704, 1568, 1646, 1947
PmaCI CACGTG 1 cut(s) 381
PmlI CACGTG 1 cut(s) 381
PpsI GAGTC 7 cut(s) 112, 337, 611, 704, 1568, 1646, 1947
Ppu21I YACGTR 1 cut(s) 381
PscI ACATGT 1 cut(s) 1774
PshBI ATTAAT 1 cut(s) 1581
Psp124BI GAGCTC 1 cut(s) 1471
Psp6I CCWGG 5 cut(s) 219, 879, 1556, 1693, 1718
PspCI CACGTG 1 cut(s) 381
PspFI CCCAGC 2 cut(s) 944, 2133
PspGI CCWGG 5 cut(s) 219, 879, 1556, 1693, 1718
PspN4I GGNNCC 7 cut(s) 156, 232, 233, 323, 1057, 1130, 1804
PspOMI GGGCCC 1 cut(s) 231
PspPI GGNCC 8 cut(s) 231, 232, 384, 872, 1023, 1630, 1691, 2021
PstI CTGCAG 2 cut(s) 441, 2014
PsuI RGATCY 4 cut(s) 154, 321, 498, 1055
PvuII CAGCTG 2 cut(s) 95, 587
RsaI GTAC 2 cut(s) 650, 1240
RsaNI GTAC 2 cut(s) 649, 1239
RseI CAYNNNNRTG 2 cut(s) 1215, 1938
SacI GAGCTC 1 cut(s) 1471
SapI GCTCTTC 1 cut(s) 1822
SaqAI TTAA 3 cut(s) 975, 1487, 1581
SatI GCNGC 5 cut(s) 783, 786, 1145, 1707, 1908
Sau96I GGNCC 8 cut(s) 231, 232, 384, 872, 1023, 1630, 1691, 2021
SchI GAGTC 7 cut(s) 113, 337, 612, 704, 1568, 1646, 1947
ScrFI CCNGG 9 cut(s) 221, 526, 527, 881, 1558, 1695, 1720, 1793, 1807
SduI GDGCHC 3 cut(s) 235, 1471, 1718
SfaNI GCATC 4 cut(s) 1069, 1273, 1837, 1859
SfcI CTRYAG 3 cut(s) 437, 2010, 2080
SinI GGWCC 2 cut(s) 872, 1630
SmaI CCCGGG 1 cut(s) 527
SmiMI CAYNNNNRTG 2 cut(s) 1215, 1938
SmlI CTYRAG 1 cut(s) 824
SmoI CTYRAG 1 cut(s) 824
Sse9I AATT 8 cut(s) 163, 750, 1162, 1195, 1434, 1452, 1582, 1589
SseBI AGGCCT 4 cut(s) 619, 693, 1170, 2148
SsiI CCGC 4 cut(s) 152, 1227, 1936, 2111
SstI GAGCTC 1 cut(s) 1471
StuI AGGCCT 4 cut(s) 619, 693, 1170, 2148
StyD4I CCNGG 9 cut(s) 219, 524, 525, 879, 1556, 1693, 1718, 1791, 1805
StyI CCWWGG 1 cut(s) 1026
TaaI ACNGT 5 cut(s) 706, 891, 955, 2228, 2268
TaiI ACGT 2 cut(s) 383, 1068
TaqI TCGA 3 cut(s) 1525, 1577, 2211
TaqII GACCGA 1 cut(s) 1618
TasI AATT 8 cut(s) 163, 750, 1162, 1195, 1434, 1452, 1582, 1589
Tru1I TTAA 3 cut(s) 975, 1487, 1581
Tru9I TTAA 3 cut(s) 975, 1487, 1581
TscAI CASTG 4 cut(s) 850, 1308, 1945, 2037
TseFI GTSAC 2 cut(s) 374, 700
TseI GCWGC 5 cut(s) 782, 785, 1144, 1706, 1907
Tsp45I GTSAC 2 cut(s) 374, 700
TspDTI ATGAA 6 cut(s) 549, 909, 1523, 1883, 2031, 2112
TspMI CCCGGG 1 cut(s) 525
TspRI CASTG 4 cut(s) 850, 1308, 1945, 2037
VpaK11BI GGWCC 2 cut(s) 872, 1630
VspI ATTAAT 1 cut(s) 1581
XagI CCTNNNNNAGG 1 cut(s) 1686
XapI RAATTY 2 cut(s) 1162, 1589
XceI RCATGY 1 cut(s) 1778
XmaI CCCGGG 1 cut(s) 525
XmnI GAANNNNTTC 1 cut(s) 839
Zsp2I ATGCAT 1 cut(s) 1852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.