Rroxscaffold_5G00339330

Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0010757
Physical Location & Seq
Forward (+)
7713192 .. 7721926
8735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00339330.1

Sequence Viewer

Length: 2280 bp
ATGAGAAAGGAGTGTCATCCATTGTTGAGTGGAGCTAGCAGAGGATCAGCAGGTGAAGATGGAAAGTCATACAAACATGGGCTATCATCAGCTGAGATGGAGTCTTTGGCCAGCGTCTGCGAGGTTATATTTCCTCCTTTGCCATTGGCGGATCCTAGTTTTGAAGGGAAGAAGGAGGAGCTATCTGGAAATAAGGCTGTGCAGTCCTTCTACCAGGCTTCTGGGGCTCAAACTGGAATCCCAGATGAGGTTGCAGAGCTATTGGTGAAGAGGGGTTTTATGGAAGCCGTGGTTCTCGTTAGAGTGCTTTTATGGATCCTAAGCAGTAGGTTGGGGACTTTATTGCTCTGTGGTTCTCTTTGCTTGGGTAACACGTGGCCCTTCGTTTACAAGTTCTCATGTCTGCCATTGGAGAAGAGAGAGAGGGTTCTGCAGAGGTGGTTCAGGCATAGGTTCCTCACCCCTATTAGGCTTGCTTTTCTTTACATCAAGATCCTTTGCCTCCTCATTTTCTTCACCCGGGTTGATGAAAATGCTGAAAACCCAGCATGGGAAGCCATTGGATATCAAGTAGAACCAACTGAGAACCCGAAAAGAGTCCCAGAAGAGAGGCCTCTTCACAAGGGAATCATAGAAACCATGTACCAAACTGACACTAGCCTTCTGGATTCTCTTGCTGACAAAGGCCTCAAAGTCACACTTAACTCCAAAAACAACCTCTACAAGATCAAATGTGATGTGGTAATTGTTGGCTCTGGCTGTGGAGGAGGTGTTGCAGCAGCTGTTCTAGCAAGTTCAGGCCAGAAAGTGATTGTTCTTGAGAAAGGGAACTACTTCACTGCTTCAGATTACTCGTCTCTGGAAGGTCCATCGCTGGATCAATTGTATGAATCAGGAGGCATTCTTGCAACTGTTGATGGGAAAGTATTGATTCAGGCTGGGTCAACAGTTGGTGGTGGCTCTGCTATTAACTGGTCAGCCTGCATTAGAACACCAGACTCTTTGCTTCAGGAATGGGCCAAGGATGAAAAGAATGCCTTCTTCGGGGGATCCGAATACGTTTCTGCAATGGATGCTGTGTGTGAGAGAATCGGGGTTACAGAGAGTTGTGTAGAGGAGGGGTTCCAAAATCAAGTGCTGCGAAAAGGGTGTGAGAATTTAGGCCTTGCAGTTCACTTTGCCCCTCGCAATTCTTCAGAAAAGCATTATTGTGGATCGTGCGGTTATGGATGTAAGAAAGGAGAGAAAAAGGGGACAGATTCTACATGGCTGGTGGATGCAGTGGATCATGGTGCAGTGATCTTATCCGGTTGCAAAGCCGAGAGATTTGTATTGGAAAAGAACTACAAGAGTGGAAGTATAAGGAAGAAGAAATGCTTGGGAGTAATGGCAAAAAGTTTATGTAACAACATAACAAAGAGACTGCAAATTGAGGCAAAAGTAACAATTTCAGCATGTGGAGCTCTTTTGACACCTCCCTTAATGATCTCTAGTGGACTAAAGAACCGGCACATTGGTCGAAATCTTCATCTCCACCCAGTCCTAATGGCCTGGGGATACTTCCCTGACTCGATTAATTCAGAATTCAAGGGTAAAAGCTATGAGGGTGGAATAATCACATCAGTCCATGAGGTCGTCTCAGCAGACTCTAGGCCAAGAGCCATCATTGAAACTCCTGCATTAGGGCCTGGAACATTTGCTGCTTTGTGCCCCTGGGTGTCTGGACTAGACATAAAGAAAAGGATGCTGAGATTTTCAAGAACTGCCCATGTGATTGTAATAATCCGGGATAAGGGTTCCGGGGTTGTTAGGACAGAGGGAAGAGCAAGCTTTGAGCTTGATGCATCAGACAAAGAGAACATGAAGGCTGGTTTGAGGCAGGCACTTAGGATTCTGATAGCAGCAGGAGCAGTTGAAGTTGGCACTCACCGCAGTGATGGGCTGAGACTCAAATGTAAAGGGACTGATAAGAAGGAACTAGAGGAGTTTTTGGACGAAGTTTCTGCAGATGAAGGGCCACAATCACTGGTAGAGAAATGGACAACCTATTCCTCAGCTCATCAAATGGGCAGCTGTAGAATGGGAATCAATGAAAAAGAAGGTGCGGTTGATCAGAATGGGGAGAGCTGGGAAGCCGAAGGCCTATTCGTCTGTGATGGTAGTGTGTTGCCTAGTGCTGTTGGCGTCAATCCGATGATCACCATCGAATCAACTGCTTACTGTCTCTCAAAGAGACTAGCAGAATCTCTAAGAAAACAACAGTTTTCCAATGATGGTTGA

Protein Analysis

759

Amino Acids

82.58

Weight (kDa)

7.9

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 293 - 514 1.4e-75 GMC oxidoreductase
GMC_oxred_C PF05199 611 - 736 1.1e-22 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes (Group: OG0010757)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23410 AT3G23410
fragaria_vesca FvH4_4g04030 FvH4_4g04030 FvH4_4g04030 FvH4_4g04030
malus_domestica MD13G1216700.v1.1
prunus_persica Prupe.1G042400_v2.0.a1
pyrus_communis pycom13g19020
rosa_chinensis RchiOBHm_Chr4g0394301
rosa_laevigata RLG00000009705 RLG00000009706
rosa_multiflora Rmu_ssc0000423.1_g000004
rosa_roxburghii Rroxscaffold_5G00339330
rosa_rugosa Rorug03G0367500.1
rosa_samantha Rh4AG051500 Rh4BG048700 Rh4CG055400 Rh4DG048800
rosa_wichuraiana Rw4G004110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 41
Acc36I ACCTGC 1 cut(s) 41
AciI CCGC 4 cut(s) 149, 1221, 1930, 2105
AcoI YGGCCR 1 cut(s) 108
AcsI RAATTY 2 cut(s) 1156, 1583
AcuI CTGAAG 3 cut(s) 828, 992, 1179
AcvI CACGTG 1 cut(s) 375
AcyI GRCGYC 1 cut(s) 2184
AfaI GTAC 1 cut(s) 644
AfiI CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
AflIII ACRYGT 1 cut(s) 372
AgsI TTSAA 5 cut(s) 164, 1588, 1670, 1758, 1916
AjnI CCWGG 4 cut(s) 213, 1550, 1687, 1712
AjuI GAANNNNNNNTTGG 2 cut(s) 1361, 1393
AleI CACNNNNGTG 1 cut(s) 1932
Alw21I GWGCWC 1 cut(s) 1465
Alw26I GTCTC 6 cut(s) 861, 1414, 1642, 1939, 2227, 2228
AlwNI CAGNNNCTG 2 cut(s) 117, 782
Ama87I CYCGRG 1 cut(s) 519
ApeKI GCWGC 6 cut(s) 776, 779, 1138, 1700, 1901, 2070
ApoI RAATTY 2 cut(s) 1156, 1583
AseI ATTAAT 1 cut(s) 1575
Asp700I GAANNNNTTC 2 cut(s) 833, 1037
AspS9I GGNCC 5 cut(s) 378, 866, 1017, 1685, 2015
AsuC2I CCSGG 4 cut(s) 520, 521, 1787, 1801
AsuHPI GGTGA 6 cut(s) 65, 277, 451, 508, 1919, 2191
AsuNHI GCTAGC 1 cut(s) 35
AvaI CYCGRG 1 cut(s) 519
AvaII GGWCC 1 cut(s) 866
BaeGI GKGCMC 1 cut(s) 1712
BalI TGGCCA 1 cut(s) 110
BamHI GGATCC 3 cut(s) 151, 315, 1049
BanII GRGCYC 2 cut(s) 229, 1465
BbrPI CACGTG 1 cut(s) 375
Bbv12I GWGCWC 1 cut(s) 1465
BbvCI CCTCAGC 1 cut(s) 2053
BbvI GCAGC 6 cut(s) 788, 791, 1125, 1687, 1913, 2082
BccI CCATC 9 cut(s) 53, 91, 877, 911, 1670, 1931, 2150, 2210, 2267
BceAI ACGGC 1 cut(s) 272
BcgI CGANNNNNNTGC 6 cut(s) 1499, 1533, 1985, 2019, 2195, 2229
BciT130I CCWGG 4 cut(s) 215, 1552, 1689, 1714
BciVI GTATCC 1 cut(s) 1550
BclI TGATCA 2 cut(s) 2110, 2196
BcnI CCSGG 4 cut(s) 520, 521, 1787, 1801
BcoDI GTCTC 6 cut(s) 861, 1414, 1642, 1939, 2227, 2228
BfmI CTRYAG 3 cut(s) 431, 2004, 2074
BfuAI ACCTGC 1 cut(s) 41
BfuI GTATCC 1 cut(s) 1550
BisI GCNGC 6 cut(s) 777, 780, 1139, 1701, 1902, 2071
BlsI GCNGC 6 cut(s) 778, 781, 1140, 1702, 1903, 2072
Bme1390I CCNGG 8 cut(s) 215, 520, 521, 1552, 1689, 1714, 1787, 1801
Bme18I GGWCC 1 cut(s) 866
BmeT110I CYCGRG 1 cut(s) 519
BmgT120I GGNCC 5 cut(s) 378, 866, 1017, 1685, 2015
BmiI GGNNCC 6 cut(s) 153, 317, 455, 1051, 1124, 1798
BmrFI CCNGG 8 cut(s) 215, 520, 521, 1552, 1689, 1714, 1787, 1801
BmrI ACTGGG 1 cut(s) 1532
BmsI GCATC 5 cut(s) 1063, 1267, 1734, 1831, 1853
BmtI GCTAGC 1 cut(s) 39
BmuI ACTGGG 1 cut(s) 1532
BplI GAGNNNNNCTC 2 cut(s) 1622, 1654
Bpu10I CCTNAGC 2 cut(s) 320, 2053
BpuEI CTTGAG 1 cut(s) 839
BpuMI CCSGG 4 cut(s) 520, 521, 1787, 1801
BsaAI YACGTR 1 cut(s) 375
BsaBI GATNNNNATC 1 cut(s) 2201
BsaHI GRCGYC 1 cut(s) 2184
BsaJI CCNNGG 7 cut(s) 288, 519, 1020, 1551, 1712, 1713, 1800
BsaWI WCCGGW 1 cut(s) 1307
BsaXI ACNNNNNCTCC 2 cut(s) 756, 786
Bsc4I CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
Bse118I RCCGGY 1 cut(s) 1506
Bse1I ACTGG 4 cut(s) 238, 977, 1538, 2031
Bse3DI GCAATG 1 cut(s) 1074
Bse8I GATNNNNATC 1 cut(s) 2201
BseBI CCWGG 4 cut(s) 215, 1552, 1689, 1714
BseDI CCNNGG 7 cut(s) 288, 519, 1020, 1551, 1712, 1713, 1800
BseGI GGATG 6 cut(s) 16, 1030, 1078, 1235, 1282, 1749
BseJI GATNNNNATC 1 cut(s) 2201
BseLI CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
BseMI GCAATG 1 cut(s) 1074
BseMII CTCAG 6 cut(s) 84, 573, 1653, 1739, 1934, 2067
BseNI ACTGG 4 cut(s) 238, 977, 1538, 2031
BseRI GAGGAG 5 cut(s) 191, 494, 780, 1130, 1997
BseSI GKGCMC 1 cut(s) 1712
BseXI GCAGC 6 cut(s) 788, 791, 1125, 1687, 1913, 2082
BseYI CCCAGC 3 cut(s) 544, 938, 2127
BsgI GTGCAG 2 cut(s) 221, 1314
BsiHKAI GWGCWC 1 cut(s) 1465
BsiHKCI CYCGRG 1 cut(s) 519
BsiSI CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
BslFI GGGAC 4 cut(s) 349, 584, 1267, 1975
BslI CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
BsmAI GTCTC 6 cut(s) 861, 1414, 1642, 1939, 2227, 2228
BsmBI CGTCTC 2 cut(s) 861, 1642
BsmFI GGGAC 4 cut(s) 349, 584, 1267, 1975
BsmI GAATGC 2 cut(s) 900, 1039
BsoBI CYCGRG 1 cut(s) 519
Bsp1286I GDGCHC 3 cut(s) 229, 1465, 1712
BspACI CCGC 4 cut(s) 149, 1221, 1930, 2105
BspCNI CTCAG 6 cut(s) 85, 574, 1652, 1740, 1935, 2066
BspLI GGNNCC 6 cut(s) 153, 317, 455, 1051, 1124, 1798
BspMAI CTGCAG 2 cut(s) 435, 2008
BspMI ACCTGC 1 cut(s) 41
BspOI GCTAGC 1 cut(s) 39
BspQI GCTCTTC 1 cut(s) 1816
BsrDI GCAATG 1 cut(s) 1074
BsrFI RCCGGY 1 cut(s) 1506
BsrI ACTGG 4 cut(s) 238, 977, 1538, 2031
BssAI RCCGGY 1 cut(s) 1506
BssECI CCNNGG 7 cut(s) 288, 519, 1020, 1551, 1712, 1713, 1800
BssNI GRCGYC 1 cut(s) 2184
BssT1I CCWWGG 1 cut(s) 1020
Bst2UI CCWGG 4 cut(s) 215, 1552, 1689, 1714
Bst4CI ACNGT 4 cut(s) 913, 949, 2222, 2262
Bst6I CTCTTC 5 cut(s) 263, 410, 600, 621, 1816
BstACI GRCGYC 1 cut(s) 2184
BstAPI GCANNNNNTGC 1 cut(s) 1073
BstBAI YACGTR 1 cut(s) 375
BstC8I GCNNGC 6 cut(s) 37, 112, 474, 982, 1828, 1881
BstDEI CTNAG 9 cut(s) 93, 320, 582, 1639, 1748, 1886, 1943, 2053, 2249
BstDSI CCRYGG 1 cut(s) 288
BstENI CCTNNNNNAGG 1 cut(s) 1680
BstF5I GGATG 6 cut(s) 16, 1030, 1078, 1235, 1282, 1749
BstMAI GTCTC 6 cut(s) 861, 1414, 1642, 1939, 2227, 2228
BstMWI GCNNNNNNNGC 7 cut(s) 224, 554, 788, 1073, 1460, 1907, 1929
BstNI CCWGG 4 cut(s) 215, 1552, 1689, 1714
BstNSI RCATGY 1 cut(s) 1458
BstSCI CCNGG 8 cut(s) 213, 518, 519, 1550, 1687, 1712, 1785, 1799
BstSFI CTRYAG 3 cut(s) 431, 2004, 2074
BstSLI GKGCMC 1 cut(s) 1712
BstV1I GCAGC 6 cut(s) 788, 791, 1125, 1687, 1913, 2082
BstX2I RGATCY 4 cut(s) 151, 315, 492, 1049
BstXI CCANNNNNNTGG 1 cut(s) 221
BstYI RGATCY 4 cut(s) 151, 315, 492, 1049
BsuI GTATCC 1 cut(s) 1550
BtgI CCRYGG 1 cut(s) 288
BtgZI GCGATG 1 cut(s) 855
BtsCI GGATG 6 cut(s) 16, 1030, 1078, 1235, 1282, 1749
BtsI GCAGTG 4 cut(s) 837, 1287, 1302, 1939
BtsIMutI CAGTG 5 cut(s) 837, 1287, 1302, 1939, 2024
BveI ACCTGC 1 cut(s) 41
Cac8I GCNNGC 6 cut(s) 37, 112, 474, 982, 1828, 1881
CaiI CAGNNNCTG 2 cut(s) 117, 782
Cfr10I RCCGGY 1 cut(s) 1506
Cfr13I GGNCC 5 cut(s) 378, 866, 1017, 1685, 2015
Cfr9I CCCGGG 1 cut(s) 519
CseI GACGC 2 cut(s) 103, 2173
Csp6I GTAC 1 cut(s) 643
CviQI GTAC 1 cut(s) 643
DdeI CTNAG 9 cut(s) 93, 320, 582, 1639, 1748, 1886, 1943, 2053, 2249
EaeI YGGCCR 1 cut(s) 108
Eam1104I CTCTTC 5 cut(s) 263, 410, 600, 621, 1816
EarI CTCTTC 5 cut(s) 263, 410, 600, 621, 1816
EciI GGCGGA 1 cut(s) 164
Ecl136II GAGCTC 1 cut(s) 1463
Eco130I CCWWGG 1 cut(s) 1020
Eco147I AGGCCT 4 cut(s) 613, 687, 1164, 2142
Eco24I GRGCYC 2 cut(s) 229, 1465
Eco32I GATATC 1 cut(s) 566
Eco47I GGWCC 1 cut(s) 866
Eco53kI GAGCTC 1 cut(s) 1463
Eco57I CTGAAG 3 cut(s) 828, 992, 1179
Eco72I CACGTG 1 cut(s) 375
Eco88I CYCGRG 1 cut(s) 519
EcoICRI GAGCTC 1 cut(s) 1463
EcoNI CCTNNNNNAGG 1 cut(s) 1680
EcoO109I RGGNCCY 1 cut(s) 1685
EcoRI GAATTC 1 cut(s) 1583
EcoRII CCWGG 4 cut(s) 213, 1550, 1687, 1712
EcoRV GATATC 1 cut(s) 566
EcoT14I CCWWGG 1 cut(s) 1020
EcoT22I ATGCAT 1 cut(s) 1846
EcoT38I GRGCYC 2 cut(s) 229, 1465
ErhI CCWWGG 1 cut(s) 1020
Esp3I CGTCTC 2 cut(s) 861, 1642
FalI AAGNNNNNCTT 6 cut(s) 684, 716, 1022, 1054, 1361, 1393
FaqI GGGAC 4 cut(s) 349, 584, 1267, 1975
FbaI TGATCA 2 cut(s) 2110, 2196
Fnu4HI GCNGC 6 cut(s) 777, 780, 1139, 1701, 1902, 2071
FokI GGATG 6 cut(s) 3, 1037, 1085, 1242, 1289, 1756
FriOI GRGCYC 2 cut(s) 229, 1465
Fsp4HI GCNGC 6 cut(s) 777, 780, 1139, 1701, 1902, 2071
GluI GCNGC 6 cut(s) 777, 780, 1139, 1701, 1902, 2071
GsaI CCCAGC 3 cut(s) 548, 942, 2131
HapII CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
HgaI GACGC 2 cut(s) 103, 2173
Hin1I GRCGYC 1 cut(s) 2184
HincII GTYRAC 1 cut(s) 945
HindII GTYRAC 1 cut(s) 945
HindIII AAGCTT 1 cut(s) 1828
HpaII CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
HphI GGTGA 6 cut(s) 65, 277, 451, 508, 1919, 2191
Hpy166II GTNNAC 4 cut(s) 388, 945, 1174, 1496
Hpy188I TCNGA 8 cut(s) 847, 1054, 1198, 1582, 1849, 1896, 2115, 2193
Hpy188III TCNNGA 9 cut(s) 186, 490, 665, 818, 860, 894, 1010, 1722, 1758
Hpy8I GTNNAC 4 cut(s) 388, 945, 1174, 1496
HpyCH4III ACNGT 4 cut(s) 913, 949, 2222, 2262
HpyCH4IV ACGT 2 cut(s) 374, 1059
HpyF10VI GCNNNNNNNGC 7 cut(s) 224, 554, 788, 1073, 1460, 1907, 1929
HpyF3I CTNAG 9 cut(s) 93, 320, 582, 1639, 1748, 1886, 1943, 2053, 2249
HpySE526I ACGT 2 cut(s) 374, 1059
Hsp92I GRCGYC 1 cut(s) 2184
Ksp22I TGATCA 2 cut(s) 2110, 2196
LguI GCTCTTC 1 cut(s) 1816
LmnI GCTCC 4 cut(s) 32, 178, 1460, 1907
Lsp1109I GCAGC 6 cut(s) 788, 791, 1125, 1687, 1913, 2082
LweI GCATC 5 cut(s) 1063, 1267, 1734, 1831, 1853
MaeII ACGT 2 cut(s) 374, 1059
MaeIII GTNAC 5 cut(s) 368, 694, 1096, 1403, 1441
MfeI CAATTG 1 cut(s) 881
MflI RGATCY 4 cut(s) 151, 315, 492, 1049
MhlI GDGCHC 3 cut(s) 229, 1465, 1712
MlsI TGGCCA 1 cut(s) 110
MluCI AATT 8 cut(s) 744, 881, 1156, 1189, 1428, 1446, 1576, 1583
MluNI TGGCCA 1 cut(s) 110
MlyI GAGTC 6 cut(s) 110, 606, 992, 1562, 1640, 1941
Mox20I TGGCCA 1 cut(s) 110
Mph1103I ATGCAT 1 cut(s) 1846
MroXI GAANNNNTTC 2 cut(s) 833, 1037
MscI TGGCCA 1 cut(s) 110
MseI TTAA 4 cut(s) 702, 969, 1481, 1575
MslI CAYNNNNRTG 2 cut(s) 1209, 1932
Msp20I TGGCCA 1 cut(s) 110
MspA1I CMGCKG 3 cut(s) 92, 782, 2073
MspI CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
MspR9I CCNGG 8 cut(s) 215, 520, 521, 1552, 1689, 1714, 1787, 1801
MunI CAATTG 1 cut(s) 881
Mva1269I GAATGC 2 cut(s) 900, 1039
MvaI CCWGG 4 cut(s) 215, 1552, 1689, 1714
MwoI GCNNNNNNNGC 7 cut(s) 224, 554, 788, 1073, 1460, 1907, 1929
NciI CCSGG 4 cut(s) 520, 521, 1787, 1801
NheI GCTAGC 1 cut(s) 35
NlaIV GGNNCC 6 cut(s) 153, 317, 455, 1051, 1124, 1798
NmeAIII GCCGAG 1 cut(s) 1345
NmuCI GTSAC 1 cut(s) 694
NsiI ATGCAT 1 cut(s) 1846
NspI RCATGY 1 cut(s) 1458
OliI CACNNNNGTG 1 cut(s) 1932
PaqCI CACCTGC 1 cut(s) 41
PasI CCCWGGG 1 cut(s) 1713
PceI AGGCCT 4 cut(s) 613, 687, 1164, 2142
PciSI GCTCTTC 1 cut(s) 1816
PcsI WCGNNNNNNNCGW 1 cut(s) 1050
PctI GAATGC 2 cut(s) 900, 1039
PdmI GAANNNNTTC 2 cut(s) 833, 1037
PfoI TCCNGGA 1 cut(s) 1785
PkrI GCNGC 6 cut(s) 778, 781, 1140, 1702, 1903, 2072
PleI GAGTC 6 cut(s) 109, 605, 992, 1562, 1640, 1941
PmaCI CACGTG 1 cut(s) 375
PmlI CACGTG 1 cut(s) 375
PpsI GAGTC 6 cut(s) 109, 605, 992, 1562, 1640, 1941
Ppu21I YACGTR 1 cut(s) 375
PshBI ATTAAT 1 cut(s) 1575
Psp124BI GAGCTC 1 cut(s) 1465
Psp6I CCWGG 4 cut(s) 213, 1550, 1687, 1712
PspCI CACGTG 1 cut(s) 375
PspFI CCCAGC 3 cut(s) 544, 938, 2127
PspGI CCWGG 4 cut(s) 213, 1550, 1687, 1712
PspN4I GGNNCC 6 cut(s) 153, 317, 455, 1051, 1124, 1798
PspPI GGNCC 5 cut(s) 378, 866, 1017, 1685, 2015
PstI CTGCAG 2 cut(s) 435, 2008
PstNI CAGNNNCTG 2 cut(s) 117, 782
PsuI RGATCY 4 cut(s) 151, 315, 492, 1049
PvuII CAGCTG 3 cut(s) 92, 782, 2073
RsaI GTAC 1 cut(s) 644
RsaNI GTAC 1 cut(s) 643
RseI CAYNNNNRTG 2 cut(s) 1209, 1932
SacI GAGCTC 1 cut(s) 1465
SapI GCTCTTC 1 cut(s) 1816
SaqAI TTAA 4 cut(s) 702, 969, 1481, 1575
SatI GCNGC 6 cut(s) 777, 780, 1139, 1701, 1902, 2071
Sau96I GGNCC 5 cut(s) 378, 866, 1017, 1685, 2015
SchI GAGTC 6 cut(s) 110, 606, 992, 1562, 1640, 1941
ScrFI CCNGG 8 cut(s) 215, 520, 521, 1552, 1689, 1714, 1787, 1801
SduI GDGCHC 3 cut(s) 229, 1465, 1712
SfaNI GCATC 5 cut(s) 1063, 1267, 1734, 1831, 1853
SfcI CTRYAG 3 cut(s) 431, 2004, 2074
SinI GGWCC 1 cut(s) 866
SmaI CCCGGG 1 cut(s) 521
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1932
SmlI CTYRAG 1 cut(s) 818
SmoI CTYRAG 1 cut(s) 818
Sse9I AATT 8 cut(s) 744, 881, 1156, 1189, 1428, 1446, 1576, 1583
SseBI AGGCCT 4 cut(s) 613, 687, 1164, 2142
SsiI CCGC 4 cut(s) 149, 1221, 1930, 2105
SstI GAGCTC 1 cut(s) 1465
StuI AGGCCT 4 cut(s) 613, 687, 1164, 2142
StyD4I CCNGG 8 cut(s) 213, 518, 519, 1550, 1687, 1712, 1785, 1799
StyI CCWWGG 1 cut(s) 1020
TaaI ACNGT 4 cut(s) 913, 949, 2222, 2262
TaiI ACGT 2 cut(s) 377, 1062
TaqI TCGA 3 cut(s) 1519, 1571, 2205
TasI AATT 8 cut(s) 744, 881, 1156, 1189, 1428, 1446, 1576, 1583
Tru1I TTAA 4 cut(s) 702, 969, 1481, 1575
Tru9I TTAA 4 cut(s) 702, 969, 1481, 1575
TscAI CASTG 5 cut(s) 844, 1287, 1302, 1939, 2031
TseFI GTSAC 1 cut(s) 694
TseI GCWGC 6 cut(s) 776, 779, 1138, 1700, 1901, 2070
Tsp45I GTSAC 1 cut(s) 694
TspDTI ATGAA 7 cut(s) 543, 903, 1041, 1517, 1877, 2025, 2106
TspMI CCCGGG 1 cut(s) 519
TspRI CASTG 5 cut(s) 844, 1287, 1302, 1939, 2031
VpaK11BI GGWCC 1 cut(s) 866
VspI ATTAAT 1 cut(s) 1575
XagI CCTNNNNNAGG 1 cut(s) 1680
XapI RAATTY 2 cut(s) 1156, 1583
XceI RCATGY 1 cut(s) 1458
XmaI CCCGGG 1 cut(s) 519
XmnI GAANNNNTTC 2 cut(s) 833, 1037
Zsp2I ATGCAT 1 cut(s) 1846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.