Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0013106

Physical Location & Seq

Genomic Coordinates Reverse (-)

30830319 .. 30835622

Gene Structure 5304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1227200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGTGTTTGAATATATTTAGGGGAAAAGTGAAGTGTGAAAGTTGGTTTACTGAGATGCCTGCTCAGATGAATAGAAGGAAAGGGAGAAGGTTGAGCTTTGAGGATGCAGTGGAGTTCTTCAACCATGTGATGGCAGAGAAGCCTTTTCTTCCATTTTTGTTACCTCTGGTTTTGTTTGCCTGGGCTTTTGAGAGATGGGTTTTCTCCTTCTCCAATTGGGTTCCACTTGCTGTTGCTGTCTGGGCAACCCTACAGTACGGGAACGATCAGCGTCGGATACTTGTTGAAGACCTGAACAAGCAATGGAAGAGAGTCATATTGAACACCTCGTCTACGACTCCACTGGAGCACTGCGAATGGCTGAATAAGCTGGTGATGGAAGTATGGCCCAACTATATGAACCCGAAGCTCTCAATAAGGTTTTCGTCCATTGTTGAGAAACGGTTGAAGCACAGAAAATCAAGGCTTATAGAAAAAGTTGAATTGCTGGAGTTTTCACTAGGTTCATCCCCGCCTAGCTTGGGTCTTCATGGGACTCGTTGGTCAACTTCAGGTGATCAGCGGATCATGCATTTGGGTTTTGACTGGGATACAAATGATATGAGTATTTTGTTGCAAGCAAAGCTTGCCAAGCCACTTATGGGGACGGCACGGATTGTTATAAATAGTCTCCACATCAAAGGCGATCTTCTCCTGATGCCGGTCTTGAACGGGAAAGCGATTTTGTACTCATTTCTGTCAGTTCCTGAAGTGAGGATAGGAATTGCCTTTGGAAGTGGCGGAAGCCAAGCACTGCCTGCTACAGAGCTTCCCGGTGTTTCTTCTTGGCTGGTTAAAATTTTGACTGACACGCTAGTTAAGACAATGGTTGAGCCTCGCCGCCGTTGTTACACTATGCCAACTGTAAACCTAGTGAAAAAGGCCGTTGGAGGCATTATATACGTGACAGTCATTTCTGCAAGCAAAGTTTCTAGGAATGGTTTGAAAGGAAGCCCGTCCAGAAAGCAGTTTGATAGAAGTTCAGATGAGCAGTTTGTCGATAAAGATCTACAGACATTTGTGGAGGTTGAACTTGAAGAGTTAACTAGAAAAACAGGTGTGAAGTTGGGTTCAAACCCTAGCTGGAATTCGAAGTTTAATATGGTGTTGCACGACGAAACAGGAAATCTTCGATTTAATCTTTATGAGTGTACGCCAGACAATGTGAAGTATGACTATCTGGCGAGTTGTGAAATTAAGGTGAAGTATGTTGAGGATGATTCAACGATATACTATGCAATAGGACCCGACTCTGGCGTGATAGCAAAACACGCTGAGTTTTGTGGAAAAGAAGTTGAATTCGTTGTTCCATTTGAGGGGGTCAATTCGGGGGAGTTGACGGTGAAGCTTGTCCTAAAAGAATGGCAATTCTCTGATGGTTCACACGTAGACAGCTCTCTTCTTACCTCACGAAGATCACTTTTTGGGTCATCAAATTTTCTACCAAAAACTGGAAGGAAAGTTAACGTAACTGTTATGGAAGGAAAAGATCTTGTTTCGAAAGACAGATCTGGAAAGTGCGATCCATATGTTAAATTGCAATATGGAAAGATTCTCCAGAGAACAAGGACTGCTCATGATTTAAATCCCGTCTGGAATCAGAAGTTTGAATTTGATGAGATTGGAGAAGGTGAATACCTGATGATAAAATGCTTCAACGAAGACACATTTGGCGATGACAACATTGGCAGCGCACGAGTTAATTTAGAGGGACTGGTCGAAGGGTCAGTCAGGGATGTGTGGATCCCTCTAGAAAAAGTGAATTCCGGAGAACTAAGGCTTCAAATAGAAGCAGTCAGAGTTGAAGGCTATGACGGGTCCAGGGGTTCGGCTACGGGTTCAGGTAATGGTTGGGTTGAACTTGTTCTCATCGAAGCAAAAGACCTTATTGCTGCTGATATGAGAGGGACAAGTGATCCATATGTGAGGGTTGAATACGGGAACTTGAAGAAACAAACAAAGGTTATGTACAAAACTCTGAATCCCCAGTGGAATCAAACCTTGGAATTTCCTGATGACGGCAGCCCCCTACTCTTGCATGTGAAAGACTACAATGCCTTATTACGGGCATCAAGTATAGGTGATTGCGTTGTGGAATATCAGAGATTGCCTCCGAATCAGATGGCAGACAAGTGGATCCCTCTTCAGAATGTGAGAAGTGGGGAAATCCATGTTCAGGTCACACGAAGAGTCCCGGAGTTGGAGAAAAGAGCAAGTTTGGATTCTGAACCATCCATAAACAAAGCACACAAAATTTCCAGTGAGATGAAGCAAACGATGATGAAGTTTCAGTCTCTAATCAAGGACGGAAATATTGAAGGGCTCGCAACGGCTATGTGTGAGCTAGAAGCCCTAGAGGATACACAAGAAGAGTACATGGTTCAACTTGAGACCGAGCAAGCACTACTTCTTAACAAGATAAAGGAGCTTGGTCAGGAAATCCTGAACTCATCTCCTTCCATCAGCAGAAGATTTTCCGGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0007275 GO:0007399 GO:0008047 GO:0008150 GO:0009898 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0010720 GO:0010975 GO:0010976 GO:0016020 GO:0022008 GO:0022603 GO:0022604 GO:0023051 GO:0023057 GO:0030154 GO:0030234 GO:0030307 GO:0030695 GO:0031224 GO:0031226 GO:0031235 GO:0031344 GO:0031346 GO:0032501 GO:0032502 GO:0040008 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0045927 GO:0046578 GO:0046580 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0051056 GO:0051058 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051336 GO:0051345 GO:0051960 GO:0051962 GO:0060284 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0098552 GO:0098562 GO:0098772 GO:0120035 GO:1902531 GO:1902532 GO:1903859 GO:1903861 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

842

Amino Acids

95.18

Weight (kDa)

6.92

Isoelectric Point (pI)

47.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	313 - 418	8.7e-06	C2 domain
C2	PF00168	500 - 597	8.9e-22	C2 domain
C2	PF00168	632 - 728	1.7e-19	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18370
fragaria_vesca	FvH4_5g12040 FvH4_5g12040
malus_domestica	MD06G1216700.v1.1 MD14G1227200.v1.1
prunus_persica	Prupe.5G221900_v2.0.a1
pyrus_communis	pycom06g19310 pycom14g18860
rosa_chinensis	RchiOBHm_Chr7g0185511
rosa_laevigata	RLG00000004906
rosa_multiflora	Rmu_sc0010190.1_g000017
rosa_roxburghii	Rroxscaffold_3G00268870
rosa_rugosa	Rorug06G0469900
rosa_samantha	Rh7AG072800 Rh7BG074800 Rh7CG074900 Rh7DG074800
rosa_wichuraiana	Rw7G006230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	662
AasI	GACNNNNNNGTC	1 cut(s)	541
AccB7I	CCANNNNNTGG	2 cut(s)	130, 1490
AccI	GTMKAC	2 cut(s)	332, 1428
AccIII	TCCGGA	2 cut(s)	1805, 2516
AciI	CCGC	4 cut(s)	512, 562, 780, 880
AclWI	GGATC	7 cut(s)	572, 1556, 1777, 1790, 1949, 2170, 2183
AcsI	RAATTY	8 cut(s)	837, 1126, 1337, 1474, 1649, 1801, 2045, 2292
AcuI	CTGAAG	3 cut(s)	534, 768, 2168
AfaI	GTAC	5 cut(s)	257, 728, 1192, 2009, 2414
AflIII	ACRYGT	1 cut(s)	1423
AjnI	CCWGG	2 cut(s)	179, 1859
AjuI	GAANNNNNNNTTGG	4 cut(s)	1692, 1724, 2024, 2056
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	3 cut(s)	674, 2337, 2423
AlwI	GGATC	7 cut(s)	572, 1556, 1777, 1790, 1949, 2170, 2183
AlwNI	CAGNNNCTG	1 cut(s)	746
Aor13HI	TCCGGA	2 cut(s)	1805, 2516
AoxI	GGCC	2 cut(s)	386, 921
ApeKI	GCWGC	3 cut(s)	1728, 1931, 2061
ApoI	RAATTY	8 cut(s)	837, 1126, 1337, 1474, 1649, 1801, 2045, 2292
ArsI	GACNNNNNNTTYG	2 cut(s)	1752, 1784
Asp700I	GAANNNNTTC	2 cut(s)	1902, 2512
AspLEI	GCGC	1 cut(s)	1733
AspS9I	GGNCC	3 cut(s)	387, 1283, 1857
AsuC2I	CCSGG	2 cut(s)	813, 2234
AsuHPI	GGTGA	6 cut(s)	385, 566, 1252, 1393, 1682, 2132
AsuII	TTCGAA	2 cut(s)	1130, 1538
AvaII	GGWCC	2 cut(s)	1283, 1857
BamHI	GGATCC	2 cut(s)	1782, 2175
BanII	GRGCYC	1 cut(s)	2364
BauI	CACGAG	1 cut(s)	1734
BbsI	GAAGAC	3 cut(s)	294, 518, 1707
Bbv12I	GWGCWC	1 cut(s)	351
BbvI	GCAGC	3 cut(s)	1740, 1918, 2073
BccI	CCATC	7 cut(s)	124, 189, 370, 1409, 2155, 2278, 2507
BceAI	ACGGC	5 cut(s)	663, 867, 908, 2074, 2385
BciT130I	CCWGG	2 cut(s)	181, 1861
BciVI	GTATCC	3 cut(s)	270, 583, 2392
BclI	TGATCA	1 cut(s)	556
BcnI	CCSGG	2 cut(s)	813, 2234
BcoDI	GTCTC	3 cut(s)	674, 2337, 2423
BfmI	CTRYAG	3 cut(s)	251, 801, 1049
BfuI	GTATCC	3 cut(s)	270, 583, 2392
BglII	AGATCT	3 cut(s)	1045, 1528, 1547
BisI	GCNGC	4 cut(s)	880, 1729, 1932, 2062
BlsI	GCNGC	4 cut(s)	881, 1730, 1933, 2063
Bme1390I	CCNGG	4 cut(s)	181, 813, 1861, 2234
Bme18I	GGWCC	2 cut(s)	1283, 1857
BmgT120I	GGNCC	3 cut(s)	387, 1283, 1857
BmiI	GGNNCC	6 cut(s)	222, 1285, 1784, 1858, 2177, 2521
BmrFI	CCNGG	4 cut(s)	181, 813, 1861, 2234
BmrI	ACTGGG	2 cut(s)	595, 2020
BmsI	GCATC	4 cut(s)	45, 94, 687, 2117
BmuI	ACTGGG	2 cut(s)	595, 2020
BpiI	GAAGAC	3 cut(s)	294, 518, 1707
BplI	GAGNNNNNCTC	2 cut(s)	2134, 2166
BpmI	CTGGAG	3 cut(s)	365, 509, 1580
Bpu14I	TTCGAA	2 cut(s)	1130, 1538
BpuEI	CTTGAG	1 cut(s)	2447
BpuMI	CCSGG	2 cut(s)	813, 2234
BsaAI	YACGTR	2 cut(s)	943, 1426
BsaBI	GATNNNNATC	2 cut(s)	1044, 1623
BsaI	GGTCTC	1 cut(s)	2423
BsaJI	CCNNGG	3 cut(s)	180, 1860, 2040
BsaWI	WCCGGW	2 cut(s)	1805, 2516
Bse118I	RCCGGY	1 cut(s)	700
Bse1I	ACTGG	6 cut(s)	348, 590, 1495, 1758, 2026, 2298
Bse3DI	GCAATG	1 cut(s)	308
Bse8I	GATNNNNATC	2 cut(s)	1044, 1623
BseAI	TCCGGA	2 cut(s)	1805, 2516
BseBI	CCWGG	2 cut(s)	181, 1861
BseDI	CCNNGG	3 cut(s)	180, 1860, 2040
BseGI	GGATG	5 cut(s)	109, 506, 1261, 1780, 2270
BseJI	GATNNNNATC	2 cut(s)	1044, 1623
BseMI	GCAATG	1 cut(s)	308
BseMII	CTCAG	3 cut(s)	42, 77, 1305
BseNI	ACTGG	6 cut(s)	348, 590, 1495, 1758, 2026, 2298
BseXI	GCAGC	3 cut(s)	1740, 1918, 2073
BshFI	GGCC	2 cut(s)	388, 923
BsiHKAI	GWGCWC	1 cut(s)	351
BsiSI	CCGG	5 cut(s)	701, 813, 1806, 2234, 2517
BslFI	GGGAC	5 cut(s)	547, 658, 1764, 1960, 2216
BsmAI	GTCTC	3 cut(s)	674, 2337, 2423
BsmFI	GGGAC	5 cut(s)	547, 658, 1764, 1960, 2216
BsnI	GGCC	2 cut(s)	388, 923
Bso31I	GGTCTC	1 cut(s)	2423
Bsp119I	TTCGAA	2 cut(s)	1130, 1538
Bsp1286I	GDGCHC	2 cut(s)	351, 2364
Bsp13I	TCCGGA	2 cut(s)	1805, 2516
Bsp1407I	TGTACA	1 cut(s)	2007
BspACI	CCGC	4 cut(s)	512, 562, 780, 880
BspANI	GGCC	2 cut(s)	388, 923
BspCNI	CTCAG	3 cut(s)	43, 76, 1306
BspEI	TCCGGA	2 cut(s)	1805, 2516
BspHI	TCATGA	1 cut(s)	1615
BspLI	GGNNCC	6 cut(s)	222, 1285, 1784, 1858, 2177, 2521
BspPI	GGATC	7 cut(s)	572, 1556, 1777, 1790, 1949, 2170, 2183
BspT104I	TTCGAA	2 cut(s)	1130, 1538
BspTNI	GGTCTC	1 cut(s)	2423
BsrDI	GCAATG	1 cut(s)	308
BsrFI	RCCGGY	1 cut(s)	700
BsrGI	TGTACA	1 cut(s)	2007
BsrI	ACTGG	6 cut(s)	348, 590, 1495, 1758, 2026, 2298
BssAI	RCCGGY	1 cut(s)	700
BssECI	CCNNGG	3 cut(s)	180, 1860, 2040
BssSI	CACGAG	1 cut(s)	1734
BssT1I	CCWWGG	1 cut(s)	2040
Bst2BI	CACGAG	1 cut(s)	1734
Bst2UI	CCWGG	2 cut(s)	181, 1861
Bst4CI	ACNGT	6 cut(s)	255, 444, 904, 949, 1381, 1513
Bst6I	CTCTTC	6 cut(s)	302, 1071, 1443, 2187, 2221, 2403
BstAPI	GCANNNNNTGC	2 cut(s)	626, 797
BstAUI	TGTACA	1 cut(s)	2007
BstBAI	YACGTR	2 cut(s)	943, 1426
BstBI	TTCGAA	2 cut(s)	1130, 1538
BstC8I	GCNNGC	7 cut(s)	60, 618, 627, 798, 961, 2364, 2439
BstDEI	CTNAG	4 cut(s)	51, 63, 1314, 1814
BstF5I	GGATG	5 cut(s)	109, 506, 1261, 1780, 2270
BstHHI	GCGC	1 cut(s)	1733
BstMAI	GTCTC	3 cut(s)	674, 2337, 2423
BstMWI	GCNNNNNNNGC	8 cut(s)	242, 367, 568, 622, 626, 631, 797, 1310
BstNI	CCWGG	2 cut(s)	181, 1861
BstNSI	RCATGY	1 cut(s)	2081
BstSCI	CCNGG	4 cut(s)	179, 811, 1859, 2232
BstSFI	CTRYAG	3 cut(s)	251, 801, 1049
BstV1I	GCAGC	3 cut(s)	1740, 1918, 2073
BstV2I	GAAGAC	3 cut(s)	294, 518, 1707
BstX2I	RGATCY	5 cut(s)	1045, 1528, 1547, 1782, 2175
BstYI	RGATCY	5 cut(s)	1045, 1528, 1547, 1782, 2175
BsuI	GTATCC	3 cut(s)	270, 583, 2392
BsuRI	GGCC	2 cut(s)	388, 923
BtgZI	GCGATG	1 cut(s)	1728
BtsCI	GGATG	5 cut(s)	109, 506, 1261, 1780, 2270
BtsI	GCAGTG	3 cut(s)	114, 349, 791
BtsIMutI	CAGTG	6 cut(s)	114, 341, 349, 791, 2033, 2305
Cac8I	GCNNGC	7 cut(s)	60, 618, 627, 798, 961, 2364, 2439
CaiI	CAGNNNCTG	1 cut(s)	746
CciI	TCATGA	1 cut(s)	1615
CfoI	GCGC	1 cut(s)	1733
Cfr10I	RCCGGY	1 cut(s)	700
Cfr13I	GGNCC	3 cut(s)	387, 1283, 1857
CseI	GACGC	1 cut(s)	260
Csp6I	GTAC	5 cut(s)	256, 727, 1191, 2008, 2413
CviAII	CATG	7 cut(s)	125, 530, 568, 1616, 2078, 2210, 2416
CviQI	GTAC	5 cut(s)	256, 727, 1191, 2008, 2413
DdeI	CTNAG	4 cut(s)	51, 63, 1314, 1814
DraI	TTTAAA	1 cut(s)	1623
DrdI	GACNNNNNNGTC	1 cut(s)	541
DseDI	GACNNNNNNGTC	1 cut(s)	541
Eam1104I	CTCTTC	6 cut(s)	302, 1071, 1443, 2187, 2221, 2403
EarI	CTCTTC	6 cut(s)	302, 1071, 1443, 2187, 2221, 2403
EciI	GGCGGA	1 cut(s)	795
Eco130I	CCWWGG	1 cut(s)	2040
Eco24I	GRGCYC	1 cut(s)	2364
Eco31I	GGTCTC	1 cut(s)	2423
Eco47I	GGWCC	2 cut(s)	1283, 1857
Eco57I	CTGAAG	3 cut(s)	534, 768, 2168
EcoO109I	RGGNCCY	1 cut(s)	1283
EcoRI	GAATTC	3 cut(s)	1126, 1337, 1801
EcoRII	CCWGG	2 cut(s)	179, 1859
EcoT14I	CCWWGG	1 cut(s)	2040
EcoT22I	ATGCAT	1 cut(s)	573
EcoT38I	GRGCYC	1 cut(s)	2364
ErhI	CCWWGG	1 cut(s)	2040
FaeI	CATG	7 cut(s)	128, 533, 571, 1619, 2081, 2213, 2419
FalI	AAGNNNNNCTT	6 cut(s)	609, 641, 672, 704, 2430, 2462
FaqI	GGGAC	5 cut(s)	547, 658, 1764, 1960, 2216
FatI	CATG	7 cut(s)	124, 529, 567, 1615, 2077, 2209, 2415
FauI	CCCGC	1 cut(s)	519
FauNDI	CATATG	2 cut(s)	1567, 1960
FbaI	TGATCA	1 cut(s)	556
FblI	GTMKAC	2 cut(s)	332, 1428
Fnu4HI	GCNGC	4 cut(s)	880, 1729, 1932, 2062
FokI	GGATG	5 cut(s)	116, 493, 1268, 1787, 2257
FriOI	GRGCYC	1 cut(s)	2364
Fsp4HI	GCNGC	4 cut(s)	880, 1729, 1932, 2062
GlaI	GCGC	1 cut(s)	1732
GluI	GCNGC	4 cut(s)	880, 1729, 1932, 2062
GsuI	CTGGAG	3 cut(s)	365, 509, 1580
HaeIII	GGCC	2 cut(s)	388, 923
HapII	CCGG	5 cut(s)	701, 813, 1806, 2234, 2517
HgaI	GACGC	1 cut(s)	260
HhaI	GCGC	1 cut(s)	1733
Hin1II	CATG	7 cut(s)	128, 533, 571, 1619, 2081, 2213, 2419
Hin6I	GCGC	1 cut(s)	1731
HinP1I	GCGC	1 cut(s)	1731
HincII	GTYRAC	4 cut(s)	546, 1083, 1377, 1504
HindII	GTYRAC	4 cut(s)	546, 1083, 1377, 1504
HindIII	AAGCTT	2 cut(s)	623, 1385
HpaI	GTTAAC	2 cut(s)	1083, 1504
HpaII	CCGG	5 cut(s)	701, 813, 1806, 2234, 2517
HphI	GGTGA	6 cut(s)	385, 566, 1252, 1393, 1682, 2132
Hpy99I	CGWCG	2 cut(s)	276, 1157
HpyCH4III	ACNGT	6 cut(s)	255, 444, 904, 949, 1381, 1513
HpyCH4IV	ACGT	3 cut(s)	942, 1425, 1506
HpyCH4V	TGCA	8 cut(s)	107, 571, 616, 959, 1150, 1277, 1579, 2077
HpyF10VI	GCNNNNNNNGC	8 cut(s)	242, 367, 568, 622, 626, 631, 797, 1310
HpyF3I	CTNAG	4 cut(s)	51, 63, 1314, 1814
HpySE526I	ACGT	3 cut(s)	942, 1425, 1506
Hsp92II	CATG	7 cut(s)	128, 533, 571, 1619, 2081, 2213, 2419
HspAI	GCGC	1 cut(s)	1731
Kpn2I	TCCGGA	2 cut(s)	1805, 2516
Ksp22I	TGATCA	1 cut(s)	556
KspAI	GTTAAC	2 cut(s)	1083, 1504
LmnI	GCTCC	2 cut(s)	346, 2464
Lsp1109I	GCAGC	3 cut(s)	1740, 1918, 2073
LweI	GCATC	4 cut(s)	45, 94, 687, 2117
MaeII	ACGT	3 cut(s)	942, 1425, 1506
MaeIII	GTNAC	5 cut(s)	159, 887, 943, 1507, 2218
MfeI	CAATTG	1 cut(s)	214
MflI	RGATCY	5 cut(s)	1045, 1528, 1547, 1782, 2175
MhlI	GDGCHC	2 cut(s)	351, 2364
MlyI	GAGTC	5 cut(s)	321, 331, 529, 1283, 2238
MmeI	TCCRAC	3 cut(s)	254, 907, 2220
Mph1103I	ATGCAT	1 cut(s)	573
MroI	TCCGGA	2 cut(s)	1805, 2516
MroXI	GAANNNNTTC	2 cut(s)	1902, 2512
MspA1I	CMGCKG	1 cut(s)	562
MspI	CCGG	5 cut(s)	701, 813, 1806, 2234, 2517
MspR9I	CCNGG	4 cut(s)	181, 813, 1861, 2234
MunI	CAATTG	1 cut(s)	214
MvaI	CCWGG	2 cut(s)	181, 1861
MwoI	GCNNNNNNNGC	8 cut(s)	242, 367, 568, 622, 626, 631, 797, 1310
NciI	CCSGG	2 cut(s)	813, 2234
NdeI	CATATG	2 cut(s)	1567, 1960
NlaIII	CATG	7 cut(s)	128, 533, 571, 1619, 2081, 2213, 2419
NlaIV	GGNNCC	6 cut(s)	222, 1285, 1784, 1858, 2177, 2521
NmuCI	GTSAC	2 cut(s)	943, 2218
NsiI	ATGCAT	1 cut(s)	573
NspI	RCATGY	1 cut(s)	2081
NspV	TTCGAA	2 cut(s)	1130, 1538
PagI	TCATGA	1 cut(s)	1615
PdmI	GAANNNNTTC	2 cut(s)	1902, 2512
PfeI	GAWTC	7 cut(s)	1259, 1591, 1636, 2020, 2032, 2155, 2261
PflMI	CCANNNNNTGG	2 cut(s)	130, 1490
PfoI	TCCNGGA	1 cut(s)	2232
PkrI	GCNGC	4 cut(s)	881, 1730, 1933, 2063
PleI	GAGTC	5 cut(s)	320, 331, 529, 1283, 2237
PpsI	GAGTC	5 cut(s)	320, 331, 529, 1283, 2237
Ppu21I	YACGTR	2 cut(s)	943, 1426
PpuMI	RGGWCCY	1 cut(s)	1283
PsiI	TTATAA	1 cut(s)	662
Psp5II	RGGWCCY	1 cut(s)	1283
Psp6I	CCWGG	2 cut(s)	179, 1859
PspGI	CCWGG	2 cut(s)	179, 1859
PspN4I	GGNNCC	6 cut(s)	222, 1285, 1784, 1858, 2177, 2521
PspPI	GGNCC	3 cut(s)	387, 1283, 1857
PspPPI	RGGWCCY	1 cut(s)	1283
PstNI	CAGNNNCTG	1 cut(s)	746
PsuI	RGATCY	5 cut(s)	1045, 1528, 1547, 1782, 2175
RsaI	GTAC	5 cut(s)	257, 728, 1192, 2009, 2414
RsaNI	GTAC	5 cut(s)	256, 727, 1191, 2008, 2413
SatI	GCNGC	4 cut(s)	880, 1729, 1932, 2062
Sau96I	GGNCC	3 cut(s)	387, 1283, 1857
SchI	GAGTC	5 cut(s)	321, 331, 529, 1283, 2238
ScrFI	CCNGG	4 cut(s)	181, 813, 1861, 2234
SduI	GDGCHC	2 cut(s)	351, 2364
SfaNI	GCATC	4 cut(s)	45, 94, 687, 2117
SfcI	CTRYAG	3 cut(s)	251, 801, 1049
SfuI	TTCGAA	2 cut(s)	1130, 1538
SinI	GGWCC	2 cut(s)	1283, 1857
SmiI	ATTTAAAT	1 cut(s)	1623
SmlI	CTYRAG	1 cut(s)	2426
SmoI	CTYRAG	1 cut(s)	2426
SsiI	CCGC	4 cut(s)	512, 562, 780, 880
SspI	AATATT	1 cut(s)	2353
StyD4I	CCNGG	4 cut(s)	179, 811, 1859, 2232
StyI	CCWWGG	1 cut(s)	2040
SwaI	ATTTAAAT	1 cut(s)	1623
TaaI	ACNGT	6 cut(s)	255, 444, 904, 949, 1381, 1513
TaiI	ACGT	3 cut(s)	945, 1428, 1509
TaqI	TCGA	6 cut(s)	1038, 1130, 1171, 1538, 1758, 1911
TaqII	GACCGA	1 cut(s)	2447
TatI	WGTACW	3 cut(s)	726, 2007, 2412
TauI	GCSGC	1 cut(s)	882
TfiI	GAWTC	7 cut(s)	1259, 1591, 1636, 2020, 2032, 2155, 2261
TscAI	CASTG	6 cut(s)	114, 348, 356, 798, 2033, 2305
TseFI	GTSAC	2 cut(s)	943, 2218
TseI	GCWGC	3 cut(s)	1728, 1931, 2061
Tsp45I	GTSAC	2 cut(s)	943, 2218
TspDTI	ATGAA	6 cut(s)	83, 413, 495, 518, 2321, 2336
TspGWI	ACGGA	2 cut(s)	667, 2361
TspRI	CASTG	6 cut(s)	114, 348, 356, 798, 2033, 2305
Van91I	CCANNNNNTGG	2 cut(s)	130, 1490
VpaK11BI	GGWCC	2 cut(s)	1283, 1857
XapI	RAATTY	8 cut(s)	837, 1126, 1337, 1474, 1649, 1801, 2045, 2292
XbaI	TCTAGA	1 cut(s)	1789
XceI	RCATGY	1 cut(s)	2081
XcmI	CCANNNNNNNNNTGG	1 cut(s)	637
XmiI	GTMKAC	2 cut(s)	332, 1428
XmnI	GAANNNNTTC	2 cut(s)	1902, 2512
Zsp2I	ATGCAT	1 cut(s)	573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.