Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0013106

Physical Location & Seq

Genomic Coordinates Forward (+)

61891753 .. 61896873

Gene Structure 5121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00268870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGAGTAGAACAAAGAATAAGAGAAGCTTGAGGGTTGAGGATGCCGTGGAGTTCTTCAACTTTGTGGTTGAAGAGAAGCCATTTCTTCCTGTTTTGATTCCTGTGGTTTTGTTTGCTTGGGCTATTGAGAGATGGGTCTTCTCCTTCTCCAACTGGGTCCCACTCGCGGTGGCCGTTTGGGCAACTGTGCAGTATGGGAACTATCAGCGTCGAATAATTGTTGAAGATTTGAACAAGAAATGGAAGAGAGTGATACTTAACACCTCGCCCATAACGCCATTGGAGCCCTGCGAATGGCTGAATAAGATGTTGACGGAAGTATGGCCCAACTATATTAACCCGAAGCTTTCTTCAAGGTTTTCATCCATTGTTGAGAAACGGCTGAAGCACAGAAAATCAAGGCTTATAGAAAGAATTGAACTGCAAGAGTTTTCACTAGGTTCAAGCCCTCCAAGCTTGGGCCTTCATGGGACACGTTGGTCAACATCAGGTGATCAGCGAATCATGCGCTTGGGTTTTGACTGGGACACAACTGATATGAGTATTATGTTGCTTGCCAAGCTTGCCATGCCATTAATGGGGACTGCACGGATTGTTATAAATAGCCTCCACATCAAGGGAGATCTTCTCCTGATGCCAGTTTTGAATGGGAGAGCAATTTTGTACTCATTTCTGTCGGTTCCTGATGTGAGGATAGGAGTTGCATTTGGTAGTGGTGGAAGCCAATCACTACCTGCTACAGAGCTTCCTGGTGTTTCTTCTTGGCTGGTGAAAATTCTTACTGACACCTTGGTTAAGACGATGGTTGAACCTCGCCGCCGTTGTTACTCTATGCCAGCAGTAAGCCTAAGGAAAAAGGCTGTTGGAGGTATTATATATGTGACAGTCGTTTCAGCCAGTAAACTTTCTAGGTCTGGCTTGAGATTAAGCCCATCCAGAAGGCAATTTGATAGTACTTCAGAAGAGCATTTTGTTGATAAAGATCTGCAGACATTTGTGGAGGTTGAGCTTGAGCAGTTAACTAGAAGAACAGATATGAAGTTCGGCTCAAACCCTAGATGGAATTCAAAATTTAATATGGTGTTACATGAAGAAACCGGTACTCTTCGATTTAATCTTTATGAATGCACACCAAACAATGTGAAGTATGACTATCTGGCGAGTTGTGAAGTTAAGGTGAAGTATGTTGAGGATGATTCTACAGTGTTTTGGGCGATAGGACCTGACTCTGGTGTAATAGCCAAACATGCTTTATTCTGTGGAAAGGAAGTTGAAATAGTTGTTCCATTTGAGGGGGTCCATTCTGGGGAGTTGACAGTGAAGCTTGTCCTTAAAGAATGGCAATTCTCTGATGGTTCGCACGTCTTGGACAACTTGAGCTCCCAAAGATCGCTTTTTGGTTCATCAAATTTTCTGCCGAGAACCGGGAGGAAAGTTAACATAACTGTTGTGGAAGGAAAGGATCTTATTGCAAAAGACAGGTCTGGGAAGTGTGCTCCATATGTTAAATTGCAGTATGGAAAGATTCTCCAGAGAACAAGGACTGCTCATGCTTTGAGTCCTCTCTGGAATCAGAAGTTCGAATTTGATGAGATAGGAGGAGGTGAGTACTTGATGATAAAGTGCTACAGTGAAGATACCTTCGGTGATGACAGCATTGGTAGTGCACGAGTTAATTTGGAGGGACTGGTTGAGGGATCAGTCAGGGATGTTTGGATCCCTCTAGAAAAAGTTAATTCTGGAGAACTTAGGCTTCAAATAGAAGCAGTTAGAGCTGAAGGCTCTGAAGGATCAAGGGGTTCGTCTACGCATTCAAATAATGGATGGCTTGAACTTGTTCTCCTTGAAGCGAAAGACCTTATTGCTGCTGATATCAGAGGGACAAGTGATCCATACGTGAGGGTTCAGTATGGGCACTTGAAGAAAAGAACAAAGAGACTGCCTCCAAACCAGATGTCAGACAAGTGGATACCCCTCCAAGGTGTGAAAAGGGGAGAGATCCATATTCGGATTACAAGAAAAGTCCCAGACTTGGAGAAAAGAACGAGCTTGGAGTCTGATCCATCCATAAAAAGAGCACACAGAATTTCTAGCGAGATGAAACAAATGATGATGAAGTTCCAGTCTCTAATTGAGGATGGAAATCTGGAAGGACTGTCCACGGCAATGTCTGAGTTAGAAAGCCTCGAGGATACACAAGAAGAGTACATGGTTCAGCTTGAGACTGAACAATCACTTCTTGTTAACAAGATAAAGGAGCTTGGTCAGGAAATGTTTGACTCGTCTCCTTCCCTTAGCAGAAGATATTCTGGAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0007275 GO:0007399 GO:0008047 GO:0008150 GO:0009898 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0010720 GO:0010975 GO:0010976 GO:0016020 GO:0022008 GO:0022603 GO:0022604 GO:0023051 GO:0023057 GO:0030154 GO:0030234 GO:0030307 GO:0030695 GO:0031224 GO:0031226 GO:0031235 GO:0031344 GO:0031346 GO:0032501 GO:0032502 GO:0040008 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0045927 GO:0046578 GO:0046580 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0051056 GO:0051058 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051336 GO:0051345 GO:0051960 GO:0051962 GO:0060284 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0098552 GO:0098562 GO:0098772 GO:0120035 GO:1902531 GO:1902532 GO:1903859 GO:1903861 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

772

Amino Acids

87.51

Weight (kDa)

8.89

Isoelectric Point (pI)

55.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	292 - 395	7.3e-06	C2 domain
C2	PF00168	478 - 575	1.2e-18	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18370
fragaria_vesca	FvH4_5g12040 FvH4_5g12040
malus_domestica	MD06G1216700.v1.1 MD14G1227200.v1.1
prunus_persica	Prupe.5G221900_v2.0.a1
pyrus_communis	pycom06g19310 pycom14g18860
rosa_chinensis	RchiOBHm_Chr7g0185511
rosa_laevigata	RLG00000004906
rosa_multiflora	Rmu_sc0010190.1_g000017
rosa_roxburghii	Rroxscaffold_3G00268870
rosa_rugosa	Rorug06G0469900
rosa_samantha	Rh7AG072800 Rh7BG074800 Rh7CG074900 Rh7DG074800
rosa_wichuraiana	Rw7G006230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	599
AasI	GACNNNNNNGTC	1 cut(s)	478
AbsI	CCTCGAGG	1 cut(s)	2186
Acc36I	ACCTGC	1 cut(s)	742
AccI	GTMKAC	1 cut(s)	1805
AccII	CGCG	1 cut(s)	167
AciI	CCGC	2 cut(s)	167, 817
AclWI	GGATC	8 cut(s)	1470, 1705, 1711, 1724, 1798, 1883, 1993, 2054
AcoI	YGGCCR	1 cut(s)	171
AcsI	RAATTY	6 cut(s)	774, 1063, 1070, 1408, 1583, 2085
AcuI	CTGAAG	4 cut(s)	404, 942, 1797, 1806
AfaI	GTAC	5 cut(s)	665, 955, 1102, 1610, 2207
AflIII	ACRYGT	1 cut(s)	473
AgeI	ACCGGT	1 cut(s)	1097
AjiI	CACGTC	1 cut(s)	1363
AjnI	CCWGG	1 cut(s)	748
AloI	GAACNNNNNNTCC	2 cut(s)	1824, 1856
Alw21I	GWGCWC	4 cut(s)	1382, 1498, 1669, 2080
Alw26I	GTCTC	4 cut(s)	1930, 2130, 2216, 2289
Alw44I	GTGCAC	1 cut(s)	1665
AlwI	GGATC	8 cut(s)	1470, 1705, 1711, 1724, 1798, 1883, 1993, 2054
Ama87I	CYCGRG	1 cut(s)	2186
AoxI	GGCC	3 cut(s)	171, 323, 460
ApaLI	GTGCAC	1 cut(s)	1665
ApeKI	GCWGC	1 cut(s)	1865
ApoI	RAATTY	6 cut(s)	774, 1063, 1070, 1408, 1583, 2085
ArsI	GACNNNNNNTTYG	4 cut(s)	1466, 1498, 1940, 1972
AseI	ATTAAT	1 cut(s)	575
AsiGI	ACCGGT	1 cut(s)	1097
Asp700I	GAANNNNTTC	2 cut(s)	1836, 2305
AspLEI	GCGC	1 cut(s)	510
AspS9I	GGNCC	5 cut(s)	157, 324, 460, 1220, 1297
AsuC2I	CCSGG	1 cut(s)	1426
AsuHPI	GGTGA	5 cut(s)	503, 781, 1189, 1616, 1658
AsuII	TTCGAA	1 cut(s)	1581
AvaI	CYCGRG	1 cut(s)	2186
AvaII	GGWCC	3 cut(s)	157, 1220, 1297
AxyI	CCTNAGG	1 cut(s)	848
BaeGI	GKGCMC	2 cut(s)	1669, 1917
BamHI	GGATCC	1 cut(s)	1716
BanII	GRGCYC	2 cut(s)	288, 1382
BauI	CACGAG	1 cut(s)	1668
BbsI	GAAGAC	1 cut(s)	130
Bbv12I	GWGCWC	4 cut(s)	1382, 1498, 1669, 2080
BbvI	GCAGC	1 cut(s)	1852
BccI	CCATC	8 cut(s)	126, 796, 940, 1053, 1346, 1818, 2071, 2132
BceAI	ACGGC	5 cut(s)	29, 158, 395, 804, 2178
BciT130I	CCWGG	1 cut(s)	750
BciVI	GTATCC	2 cut(s)	1962, 2185
BclI	TGATCA	1 cut(s)	493
BcnI	CCSGG	1 cut(s)	1426
BcoDI	GTCTC	4 cut(s)	1930, 2130, 2216, 2289
BfaI	CTAG	6 cut(s)	437, 909, 1023, 1056, 1724, 2091
BfmI	CTRYAG	4 cut(s)	738, 986, 1200, 1627
BfuAI	ACCTGC	1 cut(s)	742
BfuI	GTATCC	2 cut(s)	1962, 2185
BglI	GCCNNNNNGGC	1 cut(s)	179
BglII	AGATCT	2 cut(s)	622, 982
BisI	GCNGC	2 cut(s)	817, 1866
BlsI	GCNGC	2 cut(s)	818, 1867
BmcAI	AGTACT	2 cut(s)	955, 1610
Bme1390I	CCNGG	2 cut(s)	750, 1426
Bme18I	GGWCC	3 cut(s)	157, 1220, 1297
BmeT110I	CYCGRG	1 cut(s)	2186
BmgBI	CACGTC	1 cut(s)	1363
BmgT120I	GGNCC	5 cut(s)	157, 324, 460, 1220, 1297
BmiI	GGNNCC	6 cut(s)	158, 159, 285, 681, 1298, 1718
BmrFI	CCNGG	2 cut(s)	750, 1426
BmrI	ACTGGG	2 cut(s)	163, 532
BmsI	GCATC	2 cut(s)	31, 624
BmuI	ACTGGG	2 cut(s)	163, 532
BpiI	GAAGAC	1 cut(s)	130
BplI	GAGNNNNNCTC	4 cut(s)	612, 644, 1927, 1959
BpmI	CTGGAG	2 cut(s)	1514, 1761
Bpu10I	CCTNAGC	1 cut(s)	2294
Bpu14I	TTCGAA	1 cut(s)	1581
BpuEI	CTTGAG	5 cut(s)	49, 940, 1031, 1396, 2240
BpuMI	CCSGG	1 cut(s)	1426
BsaAI	YACGTR	1 cut(s)	1897
BsaBI	GATNNNNATC	2 cut(s)	981, 2142
BsaJI	CCNNGG	4 cut(s)	45, 789, 1978, 2160
BsaWI	WCCGGW	1 cut(s)	1097
BsaXI	ACNNNNNCTCC	4 cut(s)	1364, 1394, 1824, 1854
Bse118I	RCCGGY	1 cut(s)	1097
Bse1I	ACTGG	6 cut(s)	158, 527, 638, 897, 1692, 2122
Bse21I	CCTNAGG	1 cut(s)	848
Bse3DI	GCAATG	1 cut(s)	2172
Bse8I	GATNNNNATC	2 cut(s)	981, 2142
BseBI	CCWGG	1 cut(s)	750
BseDI	CCNNGG	4 cut(s)	45, 789, 1978, 2160
BseGI	GGATG	8 cut(s)	46, 362, 932, 1198, 1714, 1829, 2063, 2143
BseJI	GATNNNNATC	2 cut(s)	981, 2142
BseMI	GCAATG	1 cut(s)	2172
BseMII	CTCAG	1 cut(s)	2163
BseNI	ACTGG	6 cut(s)	158, 527, 638, 897, 1692, 2122
BseRI	GAGGAG	1 cut(s)	1614
BseSI	GKGCMC	2 cut(s)	1669, 1917
BseXI	GCAGC	1 cut(s)	1852
BsgI	GTGCAG	2 cut(s)	209, 570
Bsh1236I	CGCG	1 cut(s)	167
BshFI	GGCC	3 cut(s)	173, 325, 462
BshTI	ACCGGT	1 cut(s)	1097
BsiHKAI	GWGCWC	4 cut(s)	1382, 1498, 1669, 2080
BsiHKCI	CYCGRG	1 cut(s)	2186
BsiSI	CCGG	2 cut(s)	1098, 1425
BslFI	GGGAC	7 cut(s)	143, 484, 539, 595, 1698, 1894, 2009
BsmAI	GTCTC	4 cut(s)	1930, 2130, 2216, 2289
BsmBI	CGTCTC	1 cut(s)	2289
BsmFI	GGGAC	7 cut(s)	143, 484, 539, 595, 1698, 1894, 2009
BsmI	GAATGC	2 cut(s)	1130, 1810
BsnI	GGCC	3 cut(s)	173, 325, 462
BsoBI	CYCGRG	1 cut(s)	2186
Bsp119I	TTCGAA	1 cut(s)	1581
Bsp1286I	GDGCHC	6 cut(s)	288, 1382, 1498, 1669, 1917, 2080
BspACI	CCGC	2 cut(s)	167, 817
BspANI	GGCC	3 cut(s)	173, 325, 462
BspCNI	CTCAG	1 cut(s)	2164
BspFNI	CGCG	1 cut(s)	167
BspLI	GGNNCC	6 cut(s)	158, 159, 285, 681, 1298, 1718
BspMAI	CTGCAG	1 cut(s)	990
BspMI	ACCTGC	1 cut(s)	742
BspPI	GGATC	8 cut(s)	1470, 1705, 1711, 1724, 1798, 1883, 1993, 2054
BspQI	GCTCTTC	1 cut(s)	957
BspT104I	TTCGAA	1 cut(s)	1581
BsrDI	GCAATG	1 cut(s)	2172
BsrFI	RCCGGY	1 cut(s)	1097
BsrI	ACTGG	6 cut(s)	158, 527, 638, 897, 1692, 2122
BssAI	RCCGGY	1 cut(s)	1097
BssECI	CCNNGG	4 cut(s)	45, 789, 1978, 2160
BssSI	CACGAG	1 cut(s)	1668
BssT1I	CCWWGG	2 cut(s)	789, 1978
Bst2BI	CACGAG	1 cut(s)	1668
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	7 cut(s)	187, 886, 1204, 1318, 1447, 1631, 2157
Bst6I	CTCTTC	5 cut(s)	66, 239, 957, 1110, 2196
BstBAI	YACGTR	1 cut(s)	1897
BstBI	TTCGAA	1 cut(s)	1581
BstC8I	GCNNGC	3 cut(s)	555, 564, 837
BstDEI	CTNAG	4 cut(s)	848, 1748, 2172, 2294
BstDSI	CCRYGG	2 cut(s)	45, 2160
BstF5I	GGATG	8 cut(s)	46, 362, 932, 1198, 1714, 1829, 2063, 2143
BstFNI	CGCG	1 cut(s)	167
BstHHI	GCGC	1 cut(s)	510
BstMAI	GTCTC	4 cut(s)	1930, 2130, 2216, 2289
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	1 cut(s)	1250
BstSCI	CCNGG	2 cut(s)	748, 1424
BstSFI	CTRYAG	4 cut(s)	738, 986, 1200, 1627
BstSLI	GKGCMC	2 cut(s)	1669, 1917
BstUI	CGCG	1 cut(s)	167
BstV1I	GCAGC	1 cut(s)	1852
BstV2I	GAAGAC	1 cut(s)	130
BstX2I	RGATCY	5 cut(s)	622, 982, 1462, 1716, 1998
BstYI	RGATCY	5 cut(s)	622, 982, 1462, 1716, 1998
Bsu36I	CCTNAGG	1 cut(s)	848
BsuI	GTATCC	2 cut(s)	1962, 2185
BsuRI	GGCC	3 cut(s)	173, 325, 462
BtgI	CCRYGG	2 cut(s)	45, 2160
BtrI	CACGTC	1 cut(s)	1363
BtsCI	GGATG	8 cut(s)	46, 362, 932, 1198, 1714, 1829, 2063, 2143
BtsIMutI	CAGTG	3 cut(s)	1209, 1323, 1636
BveI	ACCTGC	1 cut(s)	742
Cac8I	GCNNGC	3 cut(s)	555, 564, 837
CfoI	GCGC	1 cut(s)	510
Cfr10I	RCCGGY	1 cut(s)	1097
Cfr13I	GGNCC	5 cut(s)	157, 324, 460, 1220, 1297
CseI	GACGC	1 cut(s)	197
Csp6I	GTAC	5 cut(s)	664, 954, 1101, 1609, 2206
CspAI	ACCGGT	1 cut(s)	1097
CviAII	CATG	7 cut(s)	467, 505, 568, 1088, 1247, 1550, 2209
CviQI	GTAC	5 cut(s)	664, 954, 1101, 1609, 2206
DdeI	CTNAG	4 cut(s)	848, 1748, 2172, 2294
DrdI	GACNNNNNNGTC	1 cut(s)	478
DseDI	GACNNNNNNGTC	1 cut(s)	478
EaeI	YGGCCR	1 cut(s)	171
Eam1104I	CTCTTC	5 cut(s)	66, 239, 957, 1110, 2196
EarI	CTCTTC	5 cut(s)	66, 239, 957, 1110, 2196
Ecl136II	GAGCTC	1 cut(s)	1380
Eco130I	CCWWGG	2 cut(s)	789, 1978
Eco24I	GRGCYC	2 cut(s)	288, 1382
Eco32I	GATATC	1 cut(s)	1873
Eco47I	GGWCC	3 cut(s)	157, 1220, 1297
Eco53kI	GAGCTC	1 cut(s)	1380
Eco57I	CTGAAG	4 cut(s)	404, 942, 1797, 1806
Eco81I	CCTNAGG	1 cut(s)	848
Eco88I	CYCGRG	1 cut(s)	2186
EcoICRI	GAGCTC	1 cut(s)	1380
EcoO109I	RGGNCCY	2 cut(s)	157, 1220
EcoRI	GAATTC	1 cut(s)	1063
EcoRII	CCWGG	1 cut(s)	748
EcoRV	GATATC	1 cut(s)	1873
EcoT14I	CCWWGG	2 cut(s)	789, 1978
EcoT38I	GRGCYC	2 cut(s)	288, 1382
ErhI	CCWWGG	2 cut(s)	789, 1978
Esp3I	CGTCTC	1 cut(s)	2289
FaeI	CATG	7 cut(s)	470, 508, 571, 1091, 1250, 1553, 2212
FalI	AAGNNNNNCTT	2 cut(s)	11, 43
FaqI	GGGAC	7 cut(s)	143, 484, 539, 595, 1698, 1894, 2009
FatI	CATG	7 cut(s)	466, 504, 567, 1087, 1246, 1549, 2208
FauNDI	CATATG	1 cut(s)	1501
FbaI	TGATCA	1 cut(s)	493
FblI	GTMKAC	1 cut(s)	1805
Fnu4HI	GCNGC	2 cut(s)	817, 1866
FokI	GGATG	8 cut(s)	53, 349, 919, 1205, 1721, 1836, 2050, 2150
FriOI	GRGCYC	2 cut(s)	288, 1382
Fsp4HI	GCNGC	2 cut(s)	817, 1866
FspBI	CTAG	6 cut(s)	437, 909, 1023, 1056, 1724, 2091
GlaI	GCGC	1 cut(s)	509
GluI	GCNGC	2 cut(s)	817, 1866
GsuI	CTGGAG	2 cut(s)	1514, 1761
HaeIII	GGCC	3 cut(s)	173, 325, 462
HapII	CCGG	2 cut(s)	1098, 1425
HgaI	GACGC	1 cut(s)	197
HhaI	GCGC	1 cut(s)	510
Hin1II	CATG	7 cut(s)	470, 508, 571, 1091, 1250, 1553, 2212
Hin6I	GCGC	1 cut(s)	508
HinP1I	GCGC	1 cut(s)	508
HincII	GTYRAC	6 cut(s)	312, 483, 1020, 1314, 1438, 2245
HindII	GTYRAC	6 cut(s)	312, 483, 1020, 1314, 1438, 2245
HindIII	AAGCTT	5 cut(s)	25, 344, 454, 560, 1322
HpaI	GTTAAC	3 cut(s)	1020, 1438, 2245
HpaII	CCGG	2 cut(s)	1098, 1425
HphI	GGTGA	5 cut(s)	503, 781, 1189, 1616, 1658
Hpy188I	TCNGA	9 cut(s)	961, 1351, 1575, 1786, 1877, 1960, 2010, 2059, 2173
Hpy99I	CGWCG	1 cut(s)	213
HpyAV	CCTTC	9 cut(s)	154, 473, 933, 1448, 1651, 1772, 1781, 2144, 2298
HpyCH4III	ACNGT	7 cut(s)	187, 886, 1204, 1318, 1447, 1631, 2157
HpyCH4IV	ACGT	3 cut(s)	475, 1362, 1896
HpyCH4V	TGCA	9 cut(s)	190, 424, 587, 704, 988, 1128, 1472, 1513, 1667
HpyF3I	CTNAG	4 cut(s)	848, 1748, 2172, 2294
HpySE526I	ACGT	3 cut(s)	475, 1362, 1896
Hsp92II	CATG	7 cut(s)	470, 508, 571, 1091, 1250, 1553, 2212
HspAI	GCGC	1 cut(s)	508
KflI	GGGWCCC	1 cut(s)	157
Ksp22I	TGATCA	1 cut(s)	493
KspAI	GTTAAC	3 cut(s)	1020, 1438, 2245
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	4 cut(s)	283, 1385, 1501, 2257
Lsp1109I	GCAGC	1 cut(s)	1852
LweI	GCATC	2 cut(s)	31, 624
MaeI	CTAG	6 cut(s)	437, 909, 1023, 1056, 1724, 2091
MaeII	ACGT	3 cut(s)	475, 1362, 1896
MaeIII	GTNAC	3 cut(s)	824, 880, 1083
MflI	RGATCY	5 cut(s)	622, 982, 1462, 1716, 1998
MhlI	GDGCHC	6 cut(s)	288, 1382, 1498, 1669, 1917, 2080
MlyI	GAGTC	4 cut(s)	1220, 1567, 2063, 2273
MmeI	TCCRAC	2 cut(s)	174, 844
MroXI	GAANNNNTTC	2 cut(s)	1836, 2305
MslI	CAYNNNNRTG	1 cut(s)	2165
MspI	CCGG	2 cut(s)	1098, 1425
MspR9I	CCNGG	2 cut(s)	750, 1426
Mva1269I	GAATGC	2 cut(s)	1130, 1810
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	1 cut(s)	167
NciI	CCSGG	1 cut(s)	1426
NdeI	CATATG	1 cut(s)	1501
NlaIII	CATG	7 cut(s)	470, 508, 571, 1091, 1250, 1553, 2212
NlaIV	GGNNCC	6 cut(s)	158, 159, 285, 681, 1298, 1718
NmeAIII	GCCGAG	1 cut(s)	1443
NmuCI	GTSAC	1 cut(s)	880
NspI	RCATGY	1 cut(s)	1250
NspV	TTCGAA	1 cut(s)	1581
PaeR7I	CTCGAG	1 cut(s)	2186
PciSI	GCTCTTC	1 cut(s)	957
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PctI	GAATGC	2 cut(s)	1130, 1810
PdmI	GAANNNNTTC	2 cut(s)	1836, 2305
PfeI	GAWTC	5 cut(s)	97, 501, 1196, 1525, 1570
PinAI	ACCGGT	1 cut(s)	1097
PkrI	GCNGC	2 cut(s)	818, 1867
PleI	GAGTC	4 cut(s)	1220, 1566, 2062, 2273
PpsI	GAGTC	4 cut(s)	1220, 1566, 2062, 2273
Ppu21I	YACGTR	1 cut(s)	1897
PpuMI	RGGWCCY	2 cut(s)	157, 1220
PshBI	ATTAAT	1 cut(s)	575
PsiI	TTATAA	1 cut(s)	599
Psp124BI	GAGCTC	1 cut(s)	1382
Psp5II	RGGWCCY	2 cut(s)	157, 1220
Psp6I	CCWGG	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	6 cut(s)	158, 159, 285, 681, 1298, 1718
PspPI	GGNCC	5 cut(s)	157, 324, 460, 1220, 1297
PspPPI	RGGWCCY	2 cut(s)	157, 1220
PspXI	VCTCGAGB	1 cut(s)	2186
PstI	CTGCAG	1 cut(s)	990
PsuI	RGATCY	5 cut(s)	622, 982, 1462, 1716, 1998
RsaI	GTAC	5 cut(s)	665, 955, 1102, 1610, 2207
RsaNI	GTAC	5 cut(s)	664, 954, 1101, 1609, 2206
RseI	CAYNNNNRTG	1 cut(s)	2165
SacI	GAGCTC	1 cut(s)	1382
SapI	GCTCTTC	1 cut(s)	957
SatI	GCNGC	2 cut(s)	817, 1866
Sau96I	GGNCC	5 cut(s)	157, 324, 460, 1220, 1297
ScaI	AGTACT	2 cut(s)	955, 1610
SchI	GAGTC	4 cut(s)	1220, 1567, 2063, 2273
ScrFI	CCNGG	2 cut(s)	750, 1426
SduI	GDGCHC	6 cut(s)	288, 1382, 1498, 1669, 1917, 2080
SfaNI	GCATC	2 cut(s)	31, 624
SfcI	CTRYAG	4 cut(s)	738, 986, 1200, 1627
Sfr274I	CTCGAG	1 cut(s)	2186
SfuI	TTCGAA	1 cut(s)	1581
SinI	GGWCC	3 cut(s)	157, 1220, 1297
SlaI	CTCGAG	1 cut(s)	2186
SmiMI	CAYNNNNRTG	1 cut(s)	2165
SmlI	CTYRAG	6 cut(s)	28, 919, 1010, 1375, 2186, 2219
SmoI	CTYRAG	6 cut(s)	28, 919, 1010, 1375, 2186, 2219
SsiI	CCGC	2 cut(s)	167, 817
SspMI	CTAG	6 cut(s)	437, 909, 1023, 1056, 1724, 2091
SstI	GAGCTC	1 cut(s)	1382
StyD4I	CCNGG	2 cut(s)	748, 1424
StyI	CCWWGG	2 cut(s)	789, 1978
TaaI	ACNGT	7 cut(s)	187, 886, 1204, 1318, 1447, 1631, 2157
TaiI	ACGT	3 cut(s)	478, 1365, 1899
TaqI	TCGA	4 cut(s)	211, 1108, 1581, 2187
TatI	WGTACW	4 cut(s)	663, 953, 1608, 2205
TauI	GCSGC	1 cut(s)	819
TfiI	GAWTC	5 cut(s)	97, 501, 1196, 1525, 1570
TscAI	CASTG	3 cut(s)	1209, 1323, 1636
TseFI	GTSAC	1 cut(s)	880
TseI	GCWGC	1 cut(s)	1865
Tsp45I	GTSAC	1 cut(s)	880
TspDTI	ATGAA	8 cut(s)	351, 455, 1052, 1104, 1137, 1392, 2114, 2129
TspGWI	ACGGA	2 cut(s)	329, 604
TspRI	CASTG	3 cut(s)	1209, 1323, 1636
VneI	GTGCAC	1 cut(s)	1665
VpaK11BI	GGWCC	3 cut(s)	157, 1220, 1297
VspI	ATTAAT	1 cut(s)	575
XapI	RAATTY	6 cut(s)	774, 1063, 1070, 1408, 1583, 2085
XbaI	TCTAGA	1 cut(s)	1723
XceI	RCATGY	1 cut(s)	1250
XcmI	CCANNNNNNNNNTGG	2 cut(s)	277, 574
XhoI	CTCGAG	1 cut(s)	2186
XmiI	GTMKAC	1 cut(s)	1805
XmnI	GAANNNNTTC	2 cut(s)	1836, 2305
XspI	CTAG	6 cut(s)	437, 909, 1023, 1056, 1724, 2091
ZrmI	AGTACT	2 cut(s)	955, 1610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.