Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0013106

Physical Location & Seq

Genomic Coordinates Forward (+)

59366120 .. 59367397

Gene Structure 1278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0469900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1014 bp

ATGAAGGTAATTGTGACCGGCGCCTCCGGTTACTTAGGAGGAAGACTATGCCACAAGCTACTGGAACGGGGCCACTCCGTTCGGGCCTTGGTCCGGCCCACCAGCGACCTCTCCTCCCTTCCTCCACCCTCCTCCGGTTCCCTTGAACTCGTTTACGGCGACGTCACTGACTACCACTCCCTCCTCTCCGCCTTCTCCGGCTGCCACGTCGTTTTCCACGCCGCCGCCTTAGTCGAGCCCTGGCTTCCCGATCCCTCCGACTTCTTCTCCGTCAACGTTGGGGGATTGAAGAACGTGCTGAGAGCAATCAGGGAGACGAATACCGTAGAGAAACTCATCTACACGTCGTCGTTTTTCGCTCTCGGACCCACCGACGGCGACGTCGCCGACGAGACTCAGTTCCATCACGAGAAATTCTTCTGCACGGAGTACGAGAAATCCAAAGCGGCCGCCGATAAGATCGCGTTACAAGCTGCGCAGCCAGAGGGTTTGCCGGTGCTGTTACTTTATCCCGGAGTAATTTACGGTCCCGGGAAACTCACCGCCGGCAATGTGGTTGCTCGGATGATCATCGAAAGGTTTAATGGACGATTGCCTGGGTATATAGGCGCCGGGACTGATAGGTATTCCTTTAGCCATGTCGATGATGTGGTAGATGGCCACATTGGAGCTATGAATAAAGGGAGAATTGGGGAGAGATATCTGCTTACTGGCGAAAACGCATCGTTTAAGCATGTGTTTGATGTAGCTGCTGTACTGACTCATACGCAGAGGCCTAAGTTTAACATCCCATTGTGGTTGATTGAGGTCTATGGATGGGTGTCGATTCTCGGCTCTCGGATTACAGGGAAGCTTCCTCTGATCAGCCCGCCGACTGTTTATGTTCTAAGGCATCAATGGGCGTATTCGTGTGAGAAGGCCAAGCAGGAGCTGGATTATAGTCCTAGAAGCTTGAAGGAAGGATTAGAGGAGGTGCTGCCCTGGCTCAAGAATTTGGGTTTGATCAAATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0007275 GO:0007399 GO:0008047 GO:0008150 GO:0009898 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0010720 GO:0010975 GO:0010976 GO:0016020 GO:0022008 GO:0022603 GO:0022604 GO:0023051 GO:0023057 GO:0030154 GO:0030234 GO:0030307 GO:0030695 GO:0031224 GO:0031226 GO:0031235 GO:0031344 GO:0031346 GO:0032501 GO:0032502 GO:0040008 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0045927 GO:0046578 GO:0046580 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0051056 GO:0051058 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051336 GO:0051345 GO:0051960 GO:0051962 GO:0060284 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0098552 GO:0098562 GO:0098772 GO:0120035 GO:1902531 GO:1902532 GO:1903859 GO:1903861 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

337

Amino Acids

37.11

Weight (kDa)

7.2

Isoelectric Point (pI)

30.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NmrA	PF05368	2 - 126	6.4e-13	NmrA-like family
Epimerase	PF01370	3 - 234	6.3e-35	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	3 - 142	1.8e-08	Polysaccharide biosynthesis protein
3Beta_HSD	PF01073	4 - 225	3.1e-22	3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd	PF16363	4 - 251	1.2e-19	GDP-mannose 4,6 dehydratase
NAD_binding_10	PF13460	7 - 172	7.9e-17	NAD(P)H-binding
NAD_binding_4	PF07993	66 - 218	5.9e-13	Male sterility protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18370
fragaria_vesca	FvH4_5g12040 FvH4_5g12040
malus_domestica	MD06G1216700.v1.1 MD14G1227200.v1.1
prunus_persica	Prupe.5G221900_v2.0.a1
pyrus_communis	pycom06g19310 pycom14g18860
rosa_chinensis	RchiOBHm_Chr7g0185511
rosa_laevigata	RLG00000004906
rosa_multiflora	Rmu_sc0010190.1_g000017
rosa_roxburghii	Rroxscaffold_3G00268870
rosa_rugosa	Rorug06G0469900
rosa_samantha	Rh7AG072800 Rh7BG074800 Rh7CG074900 Rh7DG074800
rosa_wichuraiana	Rw7G006230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	380
AatII	GACGTC	2 cut(s)	165, 384
Acc16I	TGCGCA	1 cut(s)	477
AccB1I	GGYRCC	2 cut(s)	20, 608
AccII	CGCG	1 cut(s)	464
AciI	CCGC	7 cut(s)	189, 222, 225, 446, 450, 543, 869
AclI	AACGTT	1 cut(s)	276
AclWI	GGATC	1 cut(s)	245
AcoI	YGGCCR	2 cut(s)	447, 658
AcsI	RAATTY	2 cut(s)	413, 991
AcyI	GRCGYC	4 cut(s)	21, 162, 381, 609
AfaI	GTAC	2 cut(s)	431, 756
AfiI	CCNNNNNNNGG	3 cut(s)	93, 134, 374
AflIII	ACRYGT	1 cut(s)	342
AgsI	TTSAA	3 cut(s)	146, 289, 955
AjiI	CACGTC	2 cut(s)	208, 345
AjnI	CCWGG	3 cut(s)	239, 595, 980
AluBI	AGCT	7 cut(s)	58, 473, 671, 749, 853, 931, 951
AluI	AGCT	7 cut(s)	58, 473, 671, 749, 853, 931, 951
Alw26I	GTCTC	2 cut(s)	308, 386
AlwI	GGATC	1 cut(s)	245
AlwNI	CAGNNNCTG	1 cut(s)	931
Ama87I	CYCGRG	1 cut(s)	530
AoxI	GGCC	7 cut(s)	70, 84, 95, 447, 658, 773, 918
ApeKI	GCWGC	5 cut(s)	201, 473, 478, 749, 976
ApoI	RAATTY	2 cut(s)	413, 991
Asp700I	GAANNNNTTC	1 cut(s)	416
AspLEI	GCGC	3 cut(s)	23, 478, 611
AspS9I	GGNCC	6 cut(s)	70, 84, 91, 96, 365, 527
AsuC2I	CCSGG	4 cut(s)	513, 531, 532, 613
AsuHPI	GGTGA	1 cut(s)	532
AvaI	CYCGRG	1 cut(s)	530
AvaII	GGWCC	3 cut(s)	91, 365, 527
BalI	TGGCCA	1 cut(s)	660
BanI	GGYRCC	2 cut(s)	20, 608
BanII	GRGCYC	1 cut(s)	240
BauI	CACGAG	1 cut(s)	407
BbsI	GAAGAC	1 cut(s)	49
BbvI	GCAGC	5 cut(s)	188, 460, 490, 736, 963
BccI	CCATC	3 cut(s)	411, 650, 810
BceAI	ACGGC	2 cut(s)	172, 391
BciT130I	CCWGG	3 cut(s)	241, 597, 982
BclI	TGATCA	3 cut(s)	567, 861, 1002
BcnI	CCSGG	4 cut(s)	513, 531, 532, 613
BcoDI	GTCTC	2 cut(s)	308, 386
BfaI	CTAG	1 cut(s)	945
BfoI	RGCGCY	2 cut(s)	24, 612
BisI	GCNGC	9 cut(s)	202, 222, 225, 447, 450, 474, 479, 750, 977
BlsI	GCNGC	9 cut(s)	203, 223, 226, 448, 451, 475, 480, 751, 978
Bme1390I	CCNGG	7 cut(s)	241, 513, 531, 532, 597, 613, 982
Bme18I	GGWCC	3 cut(s)	91, 365, 527
BmeT110I	CYCGRG	1 cut(s)	530
BmgBI	CACGTC	2 cut(s)	208, 345
BmgT120I	GGNCC	6 cut(s)	70, 84, 91, 96, 365, 527
BmiI	GGNNCC	6 cut(s)	22, 71, 139, 367, 529, 610
BmrFI	CCNGG	7 cut(s)	241, 513, 531, 532, 597, 613, 982
BmsI	GCATC	2 cut(s)	731, 901
BpiI	GAAGAC	1 cut(s)	49
BpuEI	CTTGAG	1 cut(s)	971
BpuMI	CCSGG	4 cut(s)	513, 531, 532, 613
BsaBI	GATNNNNATC	1 cut(s)	569
BsaHI	GRCGYC	4 cut(s)	21, 162, 381, 609
BsaJI	CCNNGG	5 cut(s)	87, 239, 530, 596, 980
BsaWI	WCCGGW	2 cut(s)	26, 134
BsaXI	ACNNNNNCTCC	6 cut(s)	98, 128, 161, 191, 251, 281
Bsc4I	CCNNNNNNNGG	3 cut(s)	93, 134, 374
Bse118I	RCCGGY	3 cut(s)	17, 493, 545
Bse1I	ACTGG	2 cut(s)	66, 715
Bse3DI	GCAATG	1 cut(s)	556
Bse8I	GATNNNNATC	1 cut(s)	569
BseBI	CCWGG	3 cut(s)	241, 597, 982
BseDI	CCNNGG	5 cut(s)	87, 239, 530, 596, 980
BseGI	GGATG	3 cut(s)	570, 786, 821
BseJI	GATNNNNATC	1 cut(s)	569
BseLI	CCNNNNNNNGG	3 cut(s)	93, 134, 374
BseMI	GCAATG	1 cut(s)	556
BseMII	CTCAG	2 cut(s)	290, 410
BseNI	ACTGG	2 cut(s)	66, 715
BseRI	GAGGAG	4 cut(s)	103, 121, 173, 983
BseX3I	CGGCCG	1 cut(s)	447
BseXI	GCAGC	5 cut(s)	188, 460, 490, 736, 963
BsgI	GTGCAG	1 cut(s)	406
Bsh1236I	CGCG	1 cut(s)	464
Bsh1285I	CGRYCG	1 cut(s)	450
BshFI	GGCC	7 cut(s)	72, 86, 97, 449, 660, 775, 920
BshNI	GGYRCC	2 cut(s)	20, 608
BsiEI	CGRYCG	1 cut(s)	450
BsiHKCI	CYCGRG	1 cut(s)	530
BslFI	GGGAC	2 cut(s)	513, 628
BslI	CCNNNNNNNGG	3 cut(s)	93, 134, 374
BsmAI	GTCTC	2 cut(s)	308, 386
BsmBI	CGTCTC	1 cut(s)	308
BsmFI	GGGAC	2 cut(s)	513, 628
BsnI	GGCC	7 cut(s)	72, 86, 97, 449, 660, 775, 920
BsoBI	CYCGRG	1 cut(s)	530
Bsp1286I	GDGCHC	1 cut(s)	240
Bsp143I	GATC	5 cut(s)	250, 459, 567, 861, 1002
BspACI	CCGC	7 cut(s)	189, 222, 225, 446, 450, 543, 869
BspANI	GGCC	7 cut(s)	72, 86, 97, 449, 660, 775, 920
BspCNI	CTCAG	2 cut(s)	291, 409
BspFNI	CGCG	1 cut(s)	464
BspLI	GGNNCC	6 cut(s)	22, 71, 139, 367, 529, 610
BspPI	GGATC	1 cut(s)	245
BspT107I	GGYRCC	2 cut(s)	20, 608
BsrDI	GCAATG	1 cut(s)	556
BsrFI	RCCGGY	3 cut(s)	17, 493, 545
BsrI	ACTGG	2 cut(s)	66, 715
BssAI	RCCGGY	3 cut(s)	17, 493, 545
BssECI	CCNNGG	5 cut(s)	87, 239, 530, 596, 980
BssMI	GATC	5 cut(s)	250, 459, 567, 861, 1002
BssNI	GRCGYC	4 cut(s)	21, 162, 381, 609
BssSI	CACGAG	1 cut(s)	407
BssT1I	CCWWGG	1 cut(s)	87
Bst2BI	CACGAG	1 cut(s)	407
Bst2UI	CCWGG	3 cut(s)	241, 597, 982
Bst4CI	ACNGT	3 cut(s)	325, 527, 877
BstACI	GRCGYC	4 cut(s)	21, 162, 381, 609
BstC8I	GCNNGC	2 cut(s)	547, 869
BstDEI	CTNAG	6 cut(s)	34, 229, 299, 396, 777, 887
BstF5I	GGATG	3 cut(s)	570, 786, 821
BstFNI	CGCG	1 cut(s)	464
BstH2I	RGCGCY	2 cut(s)	24, 612
BstHHI	GCGC	3 cut(s)	23, 478, 611
BstKTI	GATC	5 cut(s)	253, 462, 570, 864, 1005
BstMAI	GTCTC	2 cut(s)	308, 386
BstMBI	GATC	5 cut(s)	250, 459, 567, 861, 1002
BstMCI	CGRYCG	1 cut(s)	450
BstMWI	GCNNNNNNNGC	2 cut(s)	470, 982
BstNI	CCWGG	3 cut(s)	241, 597, 982
BstNSI	RCATGY	1 cut(s)	737
BstSCI	CCNGG	7 cut(s)	239, 511, 529, 530, 595, 611, 980
BstUI	CGCG	1 cut(s)	464
BstV1I	GCAGC	5 cut(s)	188, 460, 490, 736, 963
BstV2I	GAAGAC	1 cut(s)	49
BstZI	CGGCCG	1 cut(s)	447
BsuRI	GGCC	7 cut(s)	72, 86, 97, 449, 660, 775, 920
BtrI	CACGTC	2 cut(s)	208, 345
BtsCI	GGATG	3 cut(s)	570, 786, 821
BtsIMutI	CAGTG	1 cut(s)	165
Cac8I	GCNNGC	2 cut(s)	547, 869
CaiI	CAGNNNCTG	1 cut(s)	931
CciNI	GCGGCCGC	1 cut(s)	447
CfoI	GCGC	3 cut(s)	23, 478, 611
Cfr10I	RCCGGY	3 cut(s)	17, 493, 545
Cfr13I	GGNCC	6 cut(s)	70, 84, 91, 96, 365, 527
Cfr9I	CCCGGG	1 cut(s)	530
Csp6I	GTAC	2 cut(s)	430, 755
CviAII	CATG	2 cut(s)	638, 734
CviQI	GTAC	2 cut(s)	430, 755
DdeI	CTNAG	6 cut(s)	34, 229, 299, 396, 777, 887
DinI	GGCGCC	2 cut(s)	22, 610
DpnI	GATC	5 cut(s)	252, 461, 569, 863, 1004
DpnII	GATC	5 cut(s)	250, 459, 567, 861, 1002
DrdI	GACNNNNNNGTC	1 cut(s)	380
DseDI	GACNNNNNNGTC	1 cut(s)	380
EaeI	YGGCCR	2 cut(s)	447, 658
EagI	CGGCCG	1 cut(s)	447
EciI	GGCGGA	1 cut(s)	178
EclXI	CGGCCG	1 cut(s)	447
Eco130I	CCWWGG	1 cut(s)	87
Eco147I	AGGCCT	1 cut(s)	775
Eco24I	GRGCYC	1 cut(s)	240
Eco32I	GATATC	1 cut(s)	701
Eco47I	GGWCC	3 cut(s)	91, 365, 527
Eco52I	CGGCCG	1 cut(s)	447
Eco88I	CYCGRG	1 cut(s)	530
EcoRII	CCWGG	3 cut(s)	239, 595, 980
EcoRV	GATATC	1 cut(s)	701
EcoT14I	CCWWGG	1 cut(s)	87
EcoT38I	GRGCYC	1 cut(s)	240
EgeI	GGCGCC	2 cut(s)	22, 610
EheI	GGCGCC	2 cut(s)	22, 610
ErhI	CCWWGG	1 cut(s)	87
Esp3I	CGTCTC	1 cut(s)	308
FaeI	CATG	2 cut(s)	641, 737
FaqI	GGGAC	2 cut(s)	513, 628
FatI	CATG	2 cut(s)	637, 733
FauI	CCCGC	1 cut(s)	876
FbaI	TGATCA	3 cut(s)	567, 861, 1002
Fnu4HI	GCNGC	9 cut(s)	202, 222, 225, 447, 450, 474, 479, 750, 977
FokI	GGATG	3 cut(s)	577, 773, 828
FriOI	GRGCYC	1 cut(s)	240
Fsp4HI	GCNGC	9 cut(s)	202, 222, 225, 447, 450, 474, 479, 750, 977
FspBI	CTAG	1 cut(s)	945
FspI	TGCGCA	1 cut(s)	477
GlaI	GCGC	3 cut(s)	22, 477, 610
GluI	GCNGC	9 cut(s)	202, 222, 225, 447, 450, 474, 479, 750, 977
HaeII	RGCGCY	2 cut(s)	24, 612
HaeIII	GGCC	7 cut(s)	72, 86, 97, 449, 660, 775, 920
HhaI	GCGC	3 cut(s)	23, 478, 611
Hin1I	GRCGYC	4 cut(s)	21, 162, 381, 609
Hin1II	CATG	2 cut(s)	641, 737
Hin6I	GCGC	3 cut(s)	21, 476, 609
HinP1I	GCGC	3 cut(s)	21, 476, 609
HincII	GTYRAC	1 cut(s)	274
HindII	GTYRAC	1 cut(s)	274
HindIII	AAGCTT	2 cut(s)	851, 949
HinfI	GANTC	3 cut(s)	394, 760, 826
HphI	GGTGA	1 cut(s)	532
Hpy166II	GTNNAC	2 cut(s)	154, 274
Hpy188I	TCNGA	5 cut(s)	259, 365, 564, 840, 861
Hpy188III	TCNNGA	3 cut(s)	248, 407, 988
Hpy8I	GTNNAC	2 cut(s)	154, 274
Hpy99I	CGWCG	8 cut(s)	164, 212, 349, 352, 377, 383, 386, 392
HpyAV	CCTTC	5 cut(s)	128, 202, 910, 949, 953
HpyCH4III	ACNGT	3 cut(s)	325, 527, 877
HpyCH4IV	ACGT	6 cut(s)	162, 207, 276, 294, 344, 381
HpyCH4V	TGCA	1 cut(s)	423
HpyF10VI	GCNNNNNNNGC	2 cut(s)	470, 982
HpyF3I	CTNAG	6 cut(s)	34, 229, 299, 396, 777, 887
HpySE526I	ACGT	6 cut(s)	162, 207, 276, 294, 344, 381
Hsp92I	GRCGYC	4 cut(s)	21, 162, 381, 609
Hsp92II	CATG	2 cut(s)	641, 737
HspAI	GCGC	3 cut(s)	21, 476, 609
KasI	GGCGCC	2 cut(s)	20, 608
KroI	GCCGGC	1 cut(s)	545
KroNI	GCCGGC	1 cut(s)	547
Ksp22I	TGATCA	3 cut(s)	567, 861, 1002
Kzo9I	GATC	5 cut(s)	250, 459, 567, 861, 1002
LmnI	GCTCC	2 cut(s)	668, 928
Lsp1109I	GCAGC	5 cut(s)	188, 460, 490, 736, 963
LweI	GCATC	2 cut(s)	731, 901
MaeI	CTAG	1 cut(s)	945
MaeII	ACGT	6 cut(s)	162, 207, 276, 294, 344, 381
MaeIII	GTNAC	5 cut(s)	13, 29, 163, 465, 501
MalI	GATC	5 cut(s)	252, 461, 569, 863, 1004
MboI	GATC	5 cut(s)	250, 459, 567, 861, 1002
MboII	GAAGA	4 cut(s)	54, 256, 301, 409
MhlI	GDGCHC	1 cut(s)	240
MlsI	TGGCCA	1 cut(s)	660
MluCI	AATT	5 cut(s)	9, 413, 519, 687, 991
MluNI	TGGCCA	1 cut(s)	660
Mly113I	GGCGCC	2 cut(s)	21, 609
MlyI	GAGTC	2 cut(s)	388, 754
MmeI	TCCRAC	1 cut(s)	282
Mox20I	TGGCCA	1 cut(s)	660
MroNI	GCCGGC	1 cut(s)	545
MroXI	GAANNNNTTC	1 cut(s)	416
MscI	TGGCCA	1 cut(s)	660
MseI	TTAA	3 cut(s)	582, 729, 783
MslI	CAYNNNNRTG	1 cut(s)	642
Msp20I	TGGCCA	1 cut(s)	660
MspR9I	CCNGG	7 cut(s)	241, 513, 531, 532, 597, 613, 982
MvaI	CCWGG	3 cut(s)	241, 597, 982
MvnI	CGCG	1 cut(s)	464
MwoI	GCNNNNNNNGC	2 cut(s)	470, 982
NaeI	GCCGGC	1 cut(s)	547
NarI	GGCGCC	2 cut(s)	21, 609
NciI	CCSGG	4 cut(s)	513, 531, 532, 613
NdeII	GATC	5 cut(s)	250, 459, 567, 861, 1002
NgoMIV	GCCGGC	1 cut(s)	545
NlaIII	CATG	2 cut(s)	641, 737
NlaIV	GGNNCC	6 cut(s)	22, 71, 139, 367, 529, 610
NmeAIII	GCCGAG	1 cut(s)	810
NmuCI	GTSAC	2 cut(s)	13, 163
NotI	GCGGCCGC	1 cut(s)	447
NsbI	TGCGCA	1 cut(s)	477
NspI	RCATGY	1 cut(s)	737
PceI	AGGCCT	1 cut(s)	775
PcsI	WCGNNNNNNNCGW	3 cut(s)	156, 369, 387
PdiI	GCCGGC	1 cut(s)	547
PdmI	GAANNNNTTC	1 cut(s)	416
PfeI	GAWTC	1 cut(s)	826
PfoI	TCCNGGA	1 cut(s)	511
PkrI	GCNGC	9 cut(s)	203, 223, 226, 448, 451, 475, 480, 751, 978
PleI	GAGTC	2 cut(s)	388, 754
PluTI	GGCGCC	2 cut(s)	24, 612
PpsI	GAGTC	2 cut(s)	388, 754
Psp1406I	AACGTT	1 cut(s)	276
Psp6I	CCWGG	3 cut(s)	239, 595, 980
PspGI	CCWGG	3 cut(s)	239, 595, 980
PspN4I	GGNNCC	6 cut(s)	22, 71, 139, 367, 529, 610
PspPI	GGNCC	6 cut(s)	70, 84, 91, 96, 365, 527
PstNI	CAGNNNCTG	1 cut(s)	931
RsaI	GTAC	2 cut(s)	431, 756
RsaNI	GTAC	2 cut(s)	430, 755
RseI	CAYNNNNRTG	1 cut(s)	642
SaqAI	TTAA	3 cut(s)	582, 729, 783
SatI	GCNGC	9 cut(s)	202, 222, 225, 447, 450, 474, 479, 750, 977
Sau3AI	GATC	5 cut(s)	250, 459, 567, 861, 1002
Sau96I	GGNCC	6 cut(s)	70, 84, 91, 96, 365, 527
SchI	GAGTC	2 cut(s)	388, 754
ScrFI	CCNGG	7 cut(s)	241, 513, 531, 532, 597, 613, 982
SduI	GDGCHC	1 cut(s)	240
SfaNI	GCATC	2 cut(s)	731, 901
SfoI	GGCGCC	2 cut(s)	22, 610
SinI	GGWCC	3 cut(s)	91, 365, 527
SmaI	CCCGGG	1 cut(s)	532
SmiMI	CAYNNNNRTG	1 cut(s)	642
SmlI	CTYRAG	1 cut(s)	986
SmoI	CTYRAG	1 cut(s)	986
Sse9I	AATT	5 cut(s)	9, 413, 519, 687, 991
SseBI	AGGCCT	1 cut(s)	775
SsiI	CCGC	7 cut(s)	189, 222, 225, 446, 450, 543, 869
SspDI	GGCGCC	2 cut(s)	20, 608
SspMI	CTAG	1 cut(s)	945
StuI	AGGCCT	1 cut(s)	775
StyD4I	CCNGG	7 cut(s)	239, 511, 529, 530, 595, 611, 980
StyI	CCWWGG	1 cut(s)	87
TaaI	ACNGT	3 cut(s)	325, 527, 877
TaiI	ACGT	6 cut(s)	165, 210, 279, 297, 347, 384
TaqI	TCGA	4 cut(s)	234, 573, 642, 824
TasI	AATT	5 cut(s)	9, 413, 519, 687, 991
TatI	WGTACW	1 cut(s)	754
TauI	GCSGC	4 cut(s)	224, 227, 449, 452
TfiI	GAWTC	1 cut(s)	826
Tru1I	TTAA	3 cut(s)	582, 729, 783
Tru9I	TTAA	3 cut(s)	582, 729, 783
TscAI	CASTG	1 cut(s)	172
TseFI	GTSAC	2 cut(s)	13, 163
TseI	GCWGC	5 cut(s)	201, 473, 478, 749, 976
Tsp45I	GTSAC	2 cut(s)	13, 163
TspDTI	ATGAA	2 cut(s)	17, 689
TspGWI	ACGGA	3 cut(s)	67, 259, 440
TspMI	CCCGGG	1 cut(s)	530
TspRI	CASTG	1 cut(s)	172
VpaK11BI	GGWCC	3 cut(s)	91, 365, 527
XapI	RAATTY	2 cut(s)	413, 991
XceI	RCATGY	1 cut(s)	737
XcmI	CCANNNNNNNNNTGG	1 cut(s)	928
XmaI	CCCGGG	1 cut(s)	530
XmnI	GAANNNNTTC	1 cut(s)	416
XspI	CTAG	1 cut(s)	945
ZraI	GACGTC	2 cut(s)	163, 382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.