Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0013106

Physical Location & Seq

Genomic Coordinates Forward (+)

63564419 .. 63569521

Gene Structure 5103 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004906

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGCCACCTTCCGAGCATCAAGGGCGGGAGAGAGAGATAGCGGATGAGGTGGGACCCGCATTGGGAAAAGCCCTTAGGGACAAAAGCACTTTTGGTGGCTTCTATAAACTGCTATTATTCGGACAATTACACCCGAGAACAAAGAATAAGAGAAGCTTGAGGGTTGAGGATGCTGTGGAGTTCTTCAACTTTGTGGTTGAAGAGAAGCCATTTCTTCCTGTTTTGATTCCTGTGGTTTTGTTTGCTTGGGCTATTGAGAGATGGGTCTTCTCCTTCTCCAACTGGGTCCCACTCGCGGTGGCCGTTTGGGCAACTGTGCAGTATGGGAACTATCAGCGTCGAATAATTGTTGAAGATTTGAACAAGCAATGGAAGAGAGTGATACTTAACACCTCGCCCATAACGCCATTGGAGCCCTGCGAATGGCTGAATAGGATGTTGACGGAAGTATGGCCCAACTATATTAACCCGAAGCTTTCTTCAAGGTTTTCGTCCATTGTTGAGAAACGGCTGAAGCACAGAAAATCAAGGCTTATAGAAAGAATTGAACTGCAAGAGTTTTCACTAGGTTCAAGCCCTCCAAGCTTGGGCCTTCATGGGACACGTTGGTCAACATCAGGTGATCAGCGAATCATGCGCTTGGGTTTTGACTGGGACACAACTGATATGAGTATTATGTTGCTTGCCAAGCTTGCCATGCCATTAATGGGGACTGCACGGATTGTTATAAATAGCCTCCACATCAAGGGGGATCTTCTCCTGAGGCCAGTTTTGAATGGGAGAGCAATTTTGTACTCATTTCTGTCAGTTCCTGATGTGAGGATAGGAGTTGCGTTTGGTAGTGGTGGAAGCCAATCACTACCTGCTACAGAGCTTCCTGGTGTTTCTTCTTGGCTGGTGAAAATTCTTACTGACACCTTGGTTAAGACGATGGTTGAACCTCGCCGCCGTTGTTACTCTATGCCAGCAGTAAGCCTAAGGAAAAAGGCTGTTGGAGGTATTATATATGTGACAGTCGTTTCAGCCAGTAAACTTTCTAGATCTGGCTTGAGATTAAGCCCATCCAGAAGGCAATTGGATAGTACTTCTGAAGAGCATTTTGTTGATAAAGATCTGCAGACATTTGTGGAGGTTGAGCTTGAGCAGTTAACTAGAAGAACAGATATGAAGTTCGGCTCAAACCCTAGATGGAATTCAAAATTTAATATGGTGTTACATGAAGAAACCGGTACTCTTCGATTTAATCTTTATGAATGCACACCAAACAATGTGAAGTATGACTATCTGGCGAGTTGTGAAGTTAAGGTGAAGTATGTTGAGGATGATTCTACAGTGTTTTGGGCAATAGGACCTGACTCTGGTGTAATAGCCAAACATGCTTTATTCTGTGGAAAGGAAGTTGAAATAGTTGTTCCATTTGAGGGGGTCCATTCTGGGGAGTTGACAGTGAAGCTTGTCCTTAAAGAATGGCAATTCTCTGATGGTTCACACGTCTTGGACAACTTGAGCTCCCAAAGATCGCTTTTTGGTTCATCAAATTTTCTGCCGAGAACCGGGAGGAAAGTTAACATAACTGTTCTGGAAGGAAAGGATCTTATTGCAAAAGACAGGTCTGGGAAGTGTGCTCCATATGTTAAATTGCAGTATGGAAAGATTCTCCAGAGAACAAGGACTGCTCATGCTTTGAGTCCTCTCTGGAATCAGAAGTTTGAATTTGATGAGATAGGAGGAGGTGAATACTTGATGATAAAGTGCTACAGTGAAGATACCTTCGGTGATGACAGCATTGGTAGTGCACGAGTTAATTTGGAGGGACTGGTTGAGGGATCAGTCAGGGATGTTTGGATCCCTCTAGAAAAAGTTAAGTCTGGAGAACTTAGGCTTCAAATAGAAGCAGTTAGAGCTGAAGGCTCTGAAGGATCAAGGGGTTCGACTACGCATTCAAATAATGGATGGCTTGAACTTGTTCTCCTTGAAGCGAAAGACCTTATTGCTGCTGATATCAGAGGGACAAGTGATCCATACGTGAGGGTTCAGTATGGGCACTTGAAGAAAAGAACAAAGGTTATGTACAAAACTCTGAATCCCCACTGGAATCAGACCTTGGAATTCCCTGATGATGGAAGCCCCCTAGAGTTGCATGTTAAAGACCACAATGCTTTATTACCAACATCAAGCATCGGTGACTGTGTTGTCGAATATCAGAGACTGCCTCCAAACCAGATGTCAGACAAGTGGATACCCCTCCAAGGTGTGAAAAGGGGAGAGATCCATATTCGGATTACAAGAAAAGTCCCAGACTTGGAGAAAAGAACGAGCTTGGAGTCTGATCCATCCATAAAAAGAGCACACAGAATTTCTAGCGAGATGAAACAAATGATGATGAAGTTCCAGGGTCTAATTGAGGATGGAAATCTGGAAGGACTGTCAACGGCTATGTCTGAGTTAGAAAGCCTCGAGGATACACAAGAAGATTACATGGTTCAGCTTGAGACTGAACAATCACTTCTTGTTAACAAGATAAAGGAGCTTGGTCAGGAAATGTTTGACTCGTCTCCTTCCCTTAGCAGAAGATCTTCTGGAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0007275 GO:0007399 GO:0008047 GO:0008150 GO:0009898 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0010720 GO:0010975 GO:0010976 GO:0016020 GO:0022008 GO:0022603 GO:0022604 GO:0023051 GO:0023057 GO:0030154 GO:0030234 GO:0030307 GO:0030695 GO:0031224 GO:0031226 GO:0031235 GO:0031344 GO:0031346 GO:0032501 GO:0032502 GO:0040008 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0045927 GO:0046578 GO:0046580 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0051056 GO:0051058 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051336 GO:0051345 GO:0051960 GO:0051962 GO:0060284 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0098552 GO:0098562 GO:0098772 GO:0120035 GO:1902531 GO:1902532 GO:1903859 GO:1903861 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

863

Amino Acids

97.55

Weight (kDa)

8.49

Isoelectric Point (pI)

52.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	335 - 438	8.4e-06	C2 domain
C2	PF00168	521 - 618	1.7e-18	C2 domain
C2	PF00168	653 - 749	1.3e-19	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18370
fragaria_vesca	FvH4_5g12040 FvH4_5g12040
malus_domestica	MD06G1216700.v1.1 MD14G1227200.v1.1
prunus_persica	Prupe.5G221900_v2.0.a1
pyrus_communis	pycom06g19310 pycom14g18860
rosa_chinensis	RchiOBHm_Chr7g0185511
rosa_laevigata	RLG00000004906
rosa_multiflora	Rmu_sc0010190.1_g000017
rosa_roxburghii	Rroxscaffold_3G00268870
rosa_rugosa	Rorug06G0469900
rosa_samantha	Rh7AG072800 Rh7BG074800 Rh7CG074900 Rh7DG074800
rosa_wichuraiana	Rw7G006230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	728
AasI	GACNNNNNNGTC	2 cut(s)	607, 2192
AbsI	CCTCGAGG	1 cut(s)	2456
Acc36I	ACCTGC	1 cut(s)	871
AccII	CGCG	1 cut(s)	296
AciI	CCGC	5 cut(s)	25, 41, 57, 296, 946
AclWI	GGATC	9 cut(s)	759, 1599, 1834, 1840, 1853, 1927, 2012, 2263, 2324
AcoI	YGGCCR	1 cut(s)	300
AcsI	RAATTY	7 cut(s)	903, 1192, 1199, 1537, 1712, 2108, 2355
AcuI	CTGAAG	4 cut(s)	533, 1110, 1926, 1935
AfaI	GTAC	4 cut(s)	794, 1084, 1231, 2072
AflIII	ACRYGT	2 cut(s)	602, 1489
AgeI	ACCGGT	1 cut(s)	1226
AjiI	CACGTC	1 cut(s)	1492
AjnI	CCWGG	2 cut(s)	877, 2391
AjuI	GAANNNNNNNTTGG	2 cut(s)	2087, 2119
AloI	GAACNNNNNNTCC	2 cut(s)	1953, 1985
Alw21I	GWGCWC	4 cut(s)	1511, 1627, 1798, 2350
Alw26I	GTCTC	3 cut(s)	2200, 2486, 2559
Alw44I	GTGCAC	1 cut(s)	1794
AlwI	GGATC	9 cut(s)	759, 1599, 1834, 1840, 1853, 1927, 2012, 2263, 2324
AlwNI	CAGNNNCTG	2 cut(s)	812, 2209
Ama87I	CYCGRG	2 cut(s)	133, 2456
AoxI	GGCC	4 cut(s)	300, 452, 589, 764
ApaLI	GTGCAC	1 cut(s)	1794
ApeKI	GCWGC	1 cut(s)	1994
ApoI	RAATTY	7 cut(s)	903, 1192, 1199, 1537, 1712, 2108, 2355
ArsI	GACNNNNNNTTYG	4 cut(s)	1595, 1627, 2210, 2242
AseI	ATTAAT	1 cut(s)	704
AsiGI	ACCGGT	1 cut(s)	1226
Asp700I	GAANNNNTTC	2 cut(s)	1965, 2575
AspLEI	GCGC	1 cut(s)	639
AspS9I	GGNCC	6 cut(s)	53, 286, 453, 589, 1349, 1426
AsuC2I	CCSGG	1 cut(s)	1555
AsuHPI	GGTGA	6 cut(s)	632, 910, 1318, 1745, 1787, 2195
AvaI	CYCGRG	2 cut(s)	133, 2456
AvaII	GGWCC	4 cut(s)	53, 286, 1349, 1426
AxyI	CCTNAGG	3 cut(s)	74, 761, 977
BaeGI	GKGCMC	2 cut(s)	1798, 2046
BamHI	GGATCC	1 cut(s)	1845
BanII	GRGCYC	2 cut(s)	417, 1511
BauI	CACGAG	1 cut(s)	1797
BbsI	GAAGAC	1 cut(s)	259
Bbv12I	GWGCWC	4 cut(s)	1511, 1627, 1798, 2350
BbvI	GCAGC	1 cut(s)	1981
BccI	CCATC	9 cut(s)	255, 925, 1069, 1182, 1475, 1947, 2114, 2341, 2402
BceAI	ACGGC	4 cut(s)	287, 524, 933, 2448
BciT130I	CCWGG	2 cut(s)	879, 2393
BciVI	GTATCC	2 cut(s)	2232, 2455
BclI	TGATCA	1 cut(s)	622
BcnI	CCSGG	1 cut(s)	1555
BcoDI	GTCTC	3 cut(s)	2200, 2486, 2559
BfaI	CTAG	7 cut(s)	566, 1038, 1152, 1185, 1853, 2132, 2361
BfmI	CTRYAG	4 cut(s)	867, 1115, 1329, 1756
BfuAI	ACCTGC	1 cut(s)	871
BfuI	GTATCC	2 cut(s)	2232, 2455
BglI	GCCNNNNNGGC	1 cut(s)	308
BglII	AGATCT	3 cut(s)	1040, 1111, 2573
BisI	GCNGC	2 cut(s)	946, 1995
BlsI	GCNGC	2 cut(s)	947, 1996
BmcAI	AGTACT	1 cut(s)	1084
Bme1390I	CCNGG	3 cut(s)	879, 1555, 2393
Bme18I	GGWCC	4 cut(s)	53, 286, 1349, 1426
BmeT110I	CYCGRG	2 cut(s)	133, 2456
BmgBI	CACGTC	1 cut(s)	1492
BmgT120I	GGNCC	6 cut(s)	53, 286, 453, 589, 1349, 1426
BmiI	GGNNCC	7 cut(s)	54, 55, 287, 288, 414, 1427, 1847
BmrFI	CCNGG	3 cut(s)	879, 1555, 2393
BmrI	ACTGGG	2 cut(s)	292, 661
BmsI	GCATC	3 cut(s)	25, 160, 2187
BmuI	ACTGGG	2 cut(s)	292, 661
BpiI	GAAGAC	1 cut(s)	259
BplI	GAGNNNNNCTC	2 cut(s)	2197, 2229
BpmI	CTGGAG	2 cut(s)	1643, 1890
Bpu10I	CCTNAGC	1 cut(s)	2564
BpuEI	CTTGAG	5 cut(s)	178, 1069, 1160, 1525, 2510
BpuMI	CCSGG	1 cut(s)	1555
BsaAI	YACGTR	1 cut(s)	2026
BsaBI	GATNNNNATC	2 cut(s)	1110, 2412
BsaJI	CCNNGG	4 cut(s)	918, 2103, 2248, 2392
BsaWI	WCCGGW	1 cut(s)	1226
BsaXI	ACNNNNNCTCC	4 cut(s)	1493, 1523, 1953, 1983
Bse118I	RCCGGY	1 cut(s)	1226
Bse1I	ACTGG	6 cut(s)	287, 656, 767, 1026, 1821, 2096
Bse21I	CCTNAGG	3 cut(s)	74, 761, 977
Bse3DI	GCAATG	1 cut(s)	374
Bse8I	GATNNNNATC	2 cut(s)	1110, 2412
BseBI	CCWGG	2 cut(s)	879, 2393
BseDI	CCNNGG	4 cut(s)	918, 2103, 2248, 2392
BseGI	GGATG	9 cut(s)	49, 175, 441, 1061, 1327, 1843, 1958, 2333, 2413
BseJI	GATNNNNATC	2 cut(s)	1110, 2412
BseMI	GCAATG	1 cut(s)	374
BseMII	CTCAG	2 cut(s)	752, 2433
BseNI	ACTGG	6 cut(s)	287, 656, 767, 1026, 1821, 2096
BseRI	GAGGAG	1 cut(s)	1743
BseSI	GKGCMC	2 cut(s)	1798, 2046
BseXI	GCAGC	1 cut(s)	1981
BsgI	GTGCAG	2 cut(s)	338, 699
Bsh1236I	CGCG	1 cut(s)	296
BshFI	GGCC	4 cut(s)	302, 454, 591, 766
BshTI	ACCGGT	1 cut(s)	1226
BsiHKAI	GWGCWC	4 cut(s)	1511, 1627, 1798, 2350
BsiHKCI	CYCGRG	2 cut(s)	133, 2456
BsiSI	CCGG	2 cut(s)	1227, 1554
BslFI	GGGAC	9 cut(s)	66, 92, 272, 613, 668, 724, 1827, 2023, 2279
BsmAI	GTCTC	3 cut(s)	2200, 2486, 2559
BsmBI	CGTCTC	1 cut(s)	2559
BsmFI	GGGAC	9 cut(s)	66, 92, 272, 613, 668, 724, 1827, 2023, 2279
BsmI	GAATGC	2 cut(s)	1259, 1939
BsnI	GGCC	4 cut(s)	302, 454, 591, 766
BsoBI	CYCGRG	2 cut(s)	133, 2456
Bsp1286I	GDGCHC	6 cut(s)	417, 1511, 1627, 1798, 2046, 2350
Bsp1407I	TGTACA	1 cut(s)	2070
BspACI	CCGC	5 cut(s)	25, 41, 57, 296, 946
BspANI	GGCC	4 cut(s)	302, 454, 591, 766
BspCNI	CTCAG	2 cut(s)	753, 2434
BspFNI	CGCG	1 cut(s)	296
BspLI	GGNNCC	7 cut(s)	54, 55, 287, 288, 414, 1427, 1847
BspMAI	CTGCAG	1 cut(s)	1119
BspMI	ACCTGC	1 cut(s)	871
BspPI	GGATC	9 cut(s)	759, 1599, 1834, 1840, 1853, 1927, 2012, 2263, 2324
BspQI	GCTCTTC	1 cut(s)	1086
BsrDI	GCAATG	1 cut(s)	374
BsrFI	RCCGGY	1 cut(s)	1226
BsrGI	TGTACA	1 cut(s)	2070
BsrI	ACTGG	6 cut(s)	287, 656, 767, 1026, 1821, 2096
BssAI	RCCGGY	1 cut(s)	1226
BssECI	CCNNGG	4 cut(s)	918, 2103, 2248, 2392
BssSI	CACGAG	1 cut(s)	1797
BssT1I	CCWWGG	3 cut(s)	918, 2103, 2248
Bst2BI	CACGAG	1 cut(s)	1797
Bst2UI	CCWGG	2 cut(s)	879, 2393
Bst4CI	ACNGT	8 cut(s)	316, 1015, 1333, 1447, 1576, 1760, 2189, 2427
Bst6I	CTCTTC	4 cut(s)	195, 368, 1086, 1239
BstAUI	TGTACA	1 cut(s)	2070
BstBAI	YACGTR	1 cut(s)	2026
BstC8I	GCNNGC	3 cut(s)	684, 693, 966
BstDEI	CTNAG	6 cut(s)	74, 761, 977, 1877, 2442, 2564
BstF5I	GGATG	9 cut(s)	49, 175, 441, 1061, 1327, 1843, 1958, 2333, 2413
BstFNI	CGCG	1 cut(s)	296
BstHHI	GCGC	1 cut(s)	639
BstMAI	GTCTC	3 cut(s)	2200, 2486, 2559
BstNI	CCWGG	2 cut(s)	879, 2393
BstNSI	RCATGY	2 cut(s)	1379, 2144
BstSCI	CCNGG	3 cut(s)	877, 1553, 2391
BstSFI	CTRYAG	4 cut(s)	867, 1115, 1329, 1756
BstSLI	GKGCMC	2 cut(s)	1798, 2046
BstUI	CGCG	1 cut(s)	296
BstV1I	GCAGC	1 cut(s)	1981
BstV2I	GAAGAC	1 cut(s)	259
BstX2I	RGATCY	7 cut(s)	751, 1040, 1111, 1591, 1845, 2268, 2573
BstYI	RGATCY	7 cut(s)	751, 1040, 1111, 1591, 1845, 2268, 2573
Bsu36I	CCTNAGG	3 cut(s)	74, 761, 977
BsuI	GTATCC	2 cut(s)	2232, 2455
BsuRI	GGCC	4 cut(s)	302, 454, 591, 766
BtrI	CACGTC	1 cut(s)	1492
BtsCI	GGATG	9 cut(s)	49, 175, 441, 1061, 1327, 1843, 1958, 2333, 2413
BtsIMutI	CAGTG	4 cut(s)	1338, 1452, 1765, 2089
BveI	ACCTGC	1 cut(s)	871
Cac8I	GCNNGC	3 cut(s)	684, 693, 966
CaiI	CAGNNNCTG	2 cut(s)	812, 2209
CfoI	GCGC	1 cut(s)	639
Cfr10I	RCCGGY	1 cut(s)	1226
Cfr13I	GGNCC	6 cut(s)	53, 286, 453, 589, 1349, 1426
CseI	GACGC	1 cut(s)	326
Csp6I	GTAC	4 cut(s)	793, 1083, 1230, 2071
CspAI	ACCGGT	1 cut(s)	1226
CviAII	CATG	8 cut(s)	596, 634, 697, 1217, 1376, 1679, 2141, 2479
CviQI	GTAC	4 cut(s)	793, 1083, 1230, 2071
DdeI	CTNAG	6 cut(s)	74, 761, 977, 1877, 2442, 2564
DrdI	GACNNNNNNGTC	2 cut(s)	607, 2192
DseDI	GACNNNNNNGTC	2 cut(s)	607, 2192
EaeI	YGGCCR	1 cut(s)	300
Eam1104I	CTCTTC	4 cut(s)	195, 368, 1086, 1239
EarI	CTCTTC	4 cut(s)	195, 368, 1086, 1239
Ecl136II	GAGCTC	1 cut(s)	1509
Eco130I	CCWWGG	3 cut(s)	918, 2103, 2248
Eco24I	GRGCYC	2 cut(s)	417, 1511
Eco32I	GATATC	1 cut(s)	2002
Eco47I	GGWCC	4 cut(s)	53, 286, 1349, 1426
Eco53kI	GAGCTC	1 cut(s)	1509
Eco57I	CTGAAG	4 cut(s)	533, 1110, 1926, 1935
Eco81I	CCTNAGG	3 cut(s)	74, 761, 977
Eco88I	CYCGRG	2 cut(s)	133, 2456
EcoICRI	GAGCTC	1 cut(s)	1509
EcoO109I	RGGNCCY	3 cut(s)	53, 286, 1349
EcoRI	GAATTC	2 cut(s)	1192, 2108
EcoRII	CCWGG	2 cut(s)	877, 2391
EcoRV	GATATC	1 cut(s)	2002
EcoT14I	CCWWGG	3 cut(s)	918, 2103, 2248
EcoT38I	GRGCYC	2 cut(s)	417, 1511
ErhI	CCWWGG	3 cut(s)	918, 2103, 2248
Esp3I	CGTCTC	1 cut(s)	2559
FaeI	CATG	8 cut(s)	599, 637, 700, 1220, 1379, 1682, 2144, 2482
FalI	AAGNNNNNCTT	2 cut(s)	140, 172
FaqI	GGGAC	9 cut(s)	66, 92, 272, 613, 668, 724, 1827, 2023, 2279
FatI	CATG	8 cut(s)	595, 633, 696, 1216, 1375, 1678, 2140, 2478
FauI	CCCGC	2 cut(s)	18, 64
FauNDI	CATATG	1 cut(s)	1630
FbaI	TGATCA	1 cut(s)	622
Fnu4HI	GCNGC	2 cut(s)	946, 1995
FokI	GGATG	9 cut(s)	56, 182, 448, 1048, 1334, 1850, 1965, 2320, 2420
FriOI	GRGCYC	2 cut(s)	417, 1511
Fsp4HI	GCNGC	2 cut(s)	946, 1995
FspBI	CTAG	7 cut(s)	566, 1038, 1152, 1185, 1853, 2132, 2361
GlaI	GCGC	1 cut(s)	638
GluI	GCNGC	2 cut(s)	946, 1995
GsuI	CTGGAG	2 cut(s)	1643, 1890
HaeIII	GGCC	4 cut(s)	302, 454, 591, 766
HapII	CCGG	2 cut(s)	1227, 1554
HgaI	GACGC	1 cut(s)	326
HhaI	GCGC	1 cut(s)	639
Hin1II	CATG	8 cut(s)	599, 637, 700, 1220, 1379, 1682, 2144, 2482
Hin6I	GCGC	1 cut(s)	637
HinP1I	GCGC	1 cut(s)	637
HincII	GTYRAC	7 cut(s)	441, 612, 1149, 1443, 1567, 2430, 2515
HindII	GTYRAC	7 cut(s)	441, 612, 1149, 1443, 1567, 2430, 2515
HindIII	AAGCTT	5 cut(s)	154, 473, 583, 689, 1451
HpaI	GTTAAC	3 cut(s)	1149, 1567, 2515
HpaII	CCGG	2 cut(s)	1227, 1554
HphI	GGTGA	6 cut(s)	632, 910, 1318, 1745, 1787, 2195
Hpy99I	CGWCG	1 cut(s)	342
HpyCH4III	ACNGT	8 cut(s)	316, 1015, 1333, 1447, 1576, 1760, 2189, 2427
HpyCH4IV	ACGT	3 cut(s)	604, 1491, 2025
HpyCH4V	TGCA	9 cut(s)	319, 553, 716, 1117, 1257, 1601, 1642, 1796, 2140
HpyF3I	CTNAG	6 cut(s)	74, 761, 977, 1877, 2442, 2564
HpySE526I	ACGT	3 cut(s)	604, 1491, 2025
Hsp92II	CATG	8 cut(s)	599, 637, 700, 1220, 1379, 1682, 2144, 2482
HspAI	GCGC	1 cut(s)	637
KflI	GGGWCCC	2 cut(s)	53, 286
Ksp22I	TGATCA	1 cut(s)	622
KspAI	GTTAAC	3 cut(s)	1149, 1567, 2515
LguI	GCTCTTC	1 cut(s)	1086
LmnI	GCTCC	4 cut(s)	412, 1514, 1630, 2527
Lsp1109I	GCAGC	1 cut(s)	1981
LweI	GCATC	3 cut(s)	25, 160, 2187
MaeI	CTAG	7 cut(s)	566, 1038, 1152, 1185, 1853, 2132, 2361
MaeII	ACGT	3 cut(s)	604, 1491, 2025
MaeIII	GTNAC	4 cut(s)	953, 1009, 1212, 2183
MfeI	CAATTG	1 cut(s)	1073
MflI	RGATCY	7 cut(s)	751, 1040, 1111, 1591, 1845, 2268, 2573
MhlI	GDGCHC	6 cut(s)	417, 1511, 1627, 1798, 2046, 2350
MlyI	GAGTC	4 cut(s)	1349, 1696, 2333, 2543
MmeI	TCCRAC	2 cut(s)	303, 973
MroXI	GAANNNNTTC	2 cut(s)	1965, 2575
MspI	CCGG	2 cut(s)	1227, 1554
MspR9I	CCNGG	3 cut(s)	879, 1555, 2393
MunI	CAATTG	1 cut(s)	1073
Mva1269I	GAATGC	2 cut(s)	1259, 1939
MvaI	CCWGG	2 cut(s)	879, 2393
MvnI	CGCG	1 cut(s)	296
NciI	CCSGG	1 cut(s)	1555
NdeI	CATATG	1 cut(s)	1630
NlaIII	CATG	8 cut(s)	599, 637, 700, 1220, 1379, 1682, 2144, 2482
NlaIV	GGNNCC	7 cut(s)	54, 55, 287, 288, 414, 1427, 1847
NmeAIII	GCCGAG	1 cut(s)	1572
NmuCI	GTSAC	2 cut(s)	1009, 2183
NspI	RCATGY	2 cut(s)	1379, 2144
PaeR7I	CTCGAG	1 cut(s)	2456
PciSI	GCTCTTC	1 cut(s)	1086
PcsI	WCGNNNNNNNCGW	1 cut(s)	300
PctI	GAATGC	2 cut(s)	1259, 1939
PdmI	GAANNNNTTC	2 cut(s)	1965, 2575
PfeI	GAWTC	7 cut(s)	226, 630, 1325, 1654, 1699, 2083, 2095
PinAI	ACCGGT	1 cut(s)	1226
PkrI	GCNGC	2 cut(s)	947, 1996
PleI	GAGTC	4 cut(s)	1349, 1695, 2332, 2543
PpsI	GAGTC	4 cut(s)	1349, 1695, 2332, 2543
Ppu21I	YACGTR	1 cut(s)	2026
PpuMI	RGGWCCY	3 cut(s)	53, 286, 1349
PshBI	ATTAAT	1 cut(s)	704
PsiI	TTATAA	1 cut(s)	728
Psp124BI	GAGCTC	1 cut(s)	1511
Psp5II	RGGWCCY	3 cut(s)	53, 286, 1349
Psp6I	CCWGG	2 cut(s)	877, 2391
PspGI	CCWGG	2 cut(s)	877, 2391
PspN4I	GGNNCC	7 cut(s)	54, 55, 287, 288, 414, 1427, 1847
PspPI	GGNCC	6 cut(s)	53, 286, 453, 589, 1349, 1426
PspPPI	RGGWCCY	3 cut(s)	53, 286, 1349
PspXI	VCTCGAGB	1 cut(s)	2456
PstI	CTGCAG	1 cut(s)	1119
PstNI	CAGNNNCTG	2 cut(s)	812, 2209
PsuI	RGATCY	7 cut(s)	751, 1040, 1111, 1591, 1845, 2268, 2573
RsaI	GTAC	4 cut(s)	794, 1084, 1231, 2072
RsaNI	GTAC	4 cut(s)	793, 1083, 1230, 2071
SacI	GAGCTC	1 cut(s)	1511
SapI	GCTCTTC	1 cut(s)	1086
SatI	GCNGC	2 cut(s)	946, 1995
Sau96I	GGNCC	6 cut(s)	53, 286, 453, 589, 1349, 1426
ScaI	AGTACT	1 cut(s)	1084
SchI	GAGTC	4 cut(s)	1349, 1696, 2333, 2543
ScrFI	CCNGG	3 cut(s)	879, 1555, 2393
SduI	GDGCHC	6 cut(s)	417, 1511, 1627, 1798, 2046, 2350
SfaNI	GCATC	3 cut(s)	25, 160, 2187
SfcI	CTRYAG	4 cut(s)	867, 1115, 1329, 1756
Sfr274I	CTCGAG	1 cut(s)	2456
SinI	GGWCC	4 cut(s)	53, 286, 1349, 1426
SlaI	CTCGAG	1 cut(s)	2456
SmlI	CTYRAG	6 cut(s)	157, 1048, 1139, 1504, 2456, 2489
SmoI	CTYRAG	6 cut(s)	157, 1048, 1139, 1504, 2456, 2489
SsiI	CCGC	5 cut(s)	25, 41, 57, 296, 946
SspMI	CTAG	7 cut(s)	566, 1038, 1152, 1185, 1853, 2132, 2361
SstI	GAGCTC	1 cut(s)	1511
StyD4I	CCNGG	3 cut(s)	877, 1553, 2391
StyI	CCWWGG	3 cut(s)	918, 2103, 2248
TaaI	ACNGT	8 cut(s)	316, 1015, 1333, 1447, 1576, 1760, 2189, 2427
TaiI	ACGT	3 cut(s)	607, 1494, 2028
TaqI	TCGA	5 cut(s)	340, 1237, 1931, 2196, 2457
TatI	WGTACW	3 cut(s)	792, 1082, 2070
TauI	GCSGC	1 cut(s)	948
TfiI	GAWTC	7 cut(s)	226, 630, 1325, 1654, 1699, 2083, 2095
TscAI	CASTG	4 cut(s)	1338, 1452, 1765, 2096
TseFI	GTSAC	2 cut(s)	1009, 2183
TseI	GCWGC	1 cut(s)	1994
Tsp45I	GTSAC	2 cut(s)	1009, 2183
TspDTI	ATGAA	7 cut(s)	584, 1181, 1233, 1266, 1521, 2384, 2399
TspGWI	ACGGA	2 cut(s)	458, 733
TspRI	CASTG	4 cut(s)	1338, 1452, 1765, 2096
VneI	GTGCAC	1 cut(s)	1794
VpaK11BI	GGWCC	4 cut(s)	53, 286, 1349, 1426
VspI	ATTAAT	1 cut(s)	704
XapI	RAATTY	7 cut(s)	903, 1192, 1199, 1537, 1712, 2108, 2355
XbaI	TCTAGA	2 cut(s)	1037, 1852
XceI	RCATGY	2 cut(s)	1379, 2144
XcmI	CCANNNNNNNNNTGG	3 cut(s)	406, 703, 1072
XhoI	CTCGAG	1 cut(s)	2456
XmnI	GAANNNNTTC	2 cut(s)	1965, 2575
XspI	CTAG	7 cut(s)	566, 1038, 1152, 1185, 1853, 2132, 2361
ZrmI	AGTACT	1 cut(s)	1084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.