Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0015050

Physical Location & Seq

Genomic Coordinates Forward (+)

9832199 .. 9836240

Gene Structure 4042 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1135000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGTCGTCGTGGTCAACTCCCACAGCCACCTTCATTTTCTCACTCCTCCCTCTCTTCCTCCTCCTCCTGTCAGATGCAAATGCAAATGCTGTTGACTCGGCTTCTACTGTCTGCATCATCGGCAGCGGCATCGGTGGCTCCTCAGTGGCCCACTTCCTCCGCCGCTACTCCCCTCCTCATCTCAACTTCACCATCCGGATCTTCGAGCGCAACCCCGTCGTCGGTGGTCGCATGGCCACCGTCAACGTCTCCGGCCACATCTTCGAGGCCGGCGCCTCCATTCTCCACCCCAGGAACCTGCACGCTGTGAACTACACTAAGCTTCTCAACCTCGCCGTCAATAGCCCCTCCTCCTCTGATGAATCCTCCTCTTCTGCTTTTGGAATTTGGGACGGCCATCAGTTTGTGTTCAAGACTCTGAGCTTCAAATCAGAGCTTCCCTTTGTCGATAAGATTGTTTCGCTTGCCAATTCACTCCTCATGCTCTTCAGATACGGCTACTCCCTTATCAGGATGGACAAATTTGTTGAGACTGCTGTAAACAAGTTCTGCAAGTATTATGAAAGCTTTGAGACGAGACCCATTTTCGAGACGGTGGATGAGATGCTCAAATGGGCTGGTTTGTACAATCTCACCACCGCCACTTTGGCTGTCGAACTGGCCGATGCCGGACTGTCTCCCCTCTTGATACAAGAGCTTGTCACTGTCATCACAAGAATCAATTATGGCCAAAGTGTCAGTATGAGTGGACTTGCTGGTGCAGTTTCATTGGCAGGATCAGGCGGAGGATTGTGGGCCATTAAAGGAGGGAACTGGCAGATGGCTGCCGGACTGATTGATCGTTCTGATGTTGAATTGCACCTTCAAGAAGAGATAGAATCTATTTCGTCAAATGGAGAATATTATGAGCTTAATTCCACCCTGCGGAACAGTTATACATGTGACATAGCAGTGGTTGCTTCACCTCTAGATGAGTTGAGTCTCAAGTTTAATCCTCCAATCTCCATCCCTAAGAGAGAATTGCAACACACGCATGCAACTTTTGTTAGGGGCCTCTTAAATCCTGTATATTTTGGCCTGAATTCTGTGGCAGAAATCCCGGAATTGGTTGGCACTATTGAGATTCCTGATCTTCCATTCTCAAGTATATCAGTTCTGAAGCAACATGATGAGAAAGATTTCACTTACAAGATATTCTCTCGTAAACCAATGGCGGATGCAATCCTAGATAGTATCTTCAGTGTGAGGACGGAGACAATTCGAATAAATTGGGGTGCATACCCTCATTATACAGCTCCTGAAGTATTTGCACCGTTTATTTTGGATGGTCAGCATTTGTACTATGTGAACGCTTTTGAGAATGCAGCAAGTACAATGGAGACGAGCGCTGTTGCAGCTGAGAATGTTGCAAGACTCATCCTGTCAAGATTTCCTACCATTGTACCTTTAAGTTTGCCAAGCTTGAGCTCCGAAGGCGATGGAGGGGATGTTCATGTAGATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000098 GO:0001101 GO:0001735 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006082 GO:0006508 GO:0006520 GO:0006575 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009063 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016054 GO:0016491 GO:0016667 GO:0016670 GO:0019538 GO:0019637 GO:0019752 GO:0019941 GO:0023052 GO:0030163 GO:0030327 GO:0030328 GO:0030329 GO:0031090 GO:0032870 GO:0033993 GO:0042219 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044273 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045338 GO:0046395 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0055114 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00900 ko01130 map00900 map01130

Pfam Domains

Protein Families

NAD_binding_8 Prenylcys_lyase

Protein Analysis

502

Amino Acids

54.86

Weight (kDa)

5.26

Isoelectric Point (pI)

38.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	39 - 98	3.7e-13	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	63 - 338	4.8e-17	Flavin containing amine oxidoreductase
Prenylcys_lyase	PF07156	149 - 477	1.3e-106	Prenylcysteine lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63910
fragaria_vesca	FvH4_1g24860 FvH4_1g24860
malus_domestica	MD15G1135000.v1.1
prunus_persica	Prupe.4G274700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0122521
rosa_laevigata	RLG00000018681
rosa_multiflora	Rmu_sc0003832.1_g000006 Rmu_sc0006704.1_g000006
rosa_roxburghii	Rroxscaffold_2G00121550
rosa_rugosa	Rorug02G0239200
rosa_samantha	Rh2AG297900 Rh2BG306600 Rh2CG284700 Rh2DG321500
rosa_wichuraiana	Rw2G023680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	306
AccB1I	GGYRCC	1 cut(s)	272
AccIII	TCCGGA	1 cut(s)	195
AciI	CCGC	7 cut(s)	126, 160, 163, 639, 783, 925, 1214
AclWI	GGATC	2 cut(s)	206, 784
AcoI	YGGCCR	5 cut(s)	234, 253, 394, 660, 727
AcsI	RAATTY	3 cut(s)	384, 521, 1081
AcuI	CTGAAG	4 cut(s)	472, 1178, 1222, 1320
AcyI	GRCGYC	1 cut(s)	273
AdeI	CACNNNGTG	1 cut(s)	307
AfaI	GTAC	4 cut(s)	626, 1340, 1372, 1443
AfeI	AGCGCT	1 cut(s)	1387
AfiI	CCNNNNNNNGG	4 cut(s)	221, 510, 924, 1105
AflIII	ACRYGT	1 cut(s)	938
AgsI	TTSAA	4 cut(s)	412, 427, 854, 866
AjnI	CCWGG	1 cut(s)	290
AloI	GAACNNNNNNTCC	2 cut(s)	1473, 1505
Alw21I	GWGCWC	1 cut(s)	1469
Alw26I	GTCTC	9 cut(s)	253, 524, 566, 571, 584, 681, 986, 1247, 1373
AlwI	GGATC	2 cut(s)	206, 784
AlwNI	CAGNNNCTG	1 cut(s)	1298
Aor13HI	TCCGGA	1 cut(s)	195
Aor51HI	AGCGCT	1 cut(s)	1387
ApeKI	GCWGC	4 cut(s)	123, 824, 1364, 1394
ApoI	RAATTY	3 cut(s)	384, 521, 1081
Asp700I	GAANNNNTTC	1 cut(s)	1178
AspLEI	GCGC	3 cut(s)	210, 275, 1388
AspS9I	GGNCC	3 cut(s)	148, 795, 1051
AsuC2I	CCSGG	1 cut(s)	1100
AsuHPI	GGTGA	3 cut(s)	181, 625, 954
AsuII	TTCGAA	1 cut(s)	1261
BaeI	ACNNNNGTAYC	2 cut(s)	1425, 1458
BalI	TGGCCA	2 cut(s)	236, 729
BanI	GGYRCC	1 cut(s)	272
BanII	GRGCYC	1 cut(s)	1469
Bbv12I	GWGCWC	1 cut(s)	1469
BbvI	GCAGC	4 cut(s)	135, 811, 1376, 1406
BccI	CCATC	7 cut(s)	200, 405, 508, 814, 1013, 1319, 1472
BceAI	ACGGC	3 cut(s)	320, 409, 511
BcgI	CGANNNNNNTGC	4 cut(s)	112, 146, 199, 233
BciT130I	CCWGG	1 cut(s)	292
BcnI	CCSGG	1 cut(s)	1100
BcoDI	GTCTC	9 cut(s)	253, 524, 566, 571, 584, 681, 986, 1247, 1373
BfaI	CTAG	2 cut(s)	968, 1226
BfoI	RGCGCY	2 cut(s)	276, 1389
BfuAI	ACCTGC	1 cut(s)	306
BglI	GCCNNNNNGGC	1 cut(s)	647
BglII	AGATCT	1 cut(s)	1498
BisI	GCNGC	6 cut(s)	124, 127, 163, 825, 1365, 1395
BlsI	GCNGC	6 cut(s)	125, 128, 164, 826, 1366, 1396
Bme1390I	CCNGG	2 cut(s)	292, 1100
BmgT120I	GGNCC	3 cut(s)	148, 795, 1051
BmiI	GGNNCC	4 cut(s)	139, 274, 296, 1052
BmrFI	CCNGG	2 cut(s)	292, 1100
BmsI	GCATC	6 cut(s)	64, 123, 138, 594, 655, 1207
Bpu14I	TTCGAA	1 cut(s)	1261
BpuEI	CTTGAG	3 cut(s)	968, 1126, 1483
BpuMI	CCSGG	1 cut(s)	1100
BsaHI	GRCGYC	1 cut(s)	273
BsaI	GGTCTC	1 cut(s)	571
BsaJI	CCNNGG	1 cut(s)	290
BsaWI	WCCGGW	1 cut(s)	195
BsaXI	ACNNNNNCTCC	4 cut(s)	485, 515, 1473, 1503
Bsc4I	CCNNNNNNNGG	4 cut(s)	221, 510, 924, 1105
Bse118I	RCCGGY	1 cut(s)	269
Bse1I	ACTGG	2 cut(s)	663, 818
BseAI	TCCGGA	1 cut(s)	195
BseBI	CCWGG	1 cut(s)	292
BseDI	CCNNGG	1 cut(s)	290
BseGI	GGATG	8 cut(s)	192, 519, 604, 1005, 1222, 1330, 1416, 1492
BseLI	CCNNNNNNNGG	4 cut(s)	221, 510, 924, 1105
BseMII	CTCAG	3 cut(s)	156, 410, 1389
BseNI	ACTGG	2 cut(s)	663, 818
BseRI	GAGGAG	9 cut(s)	35, 50, 53, 130, 165, 340, 343, 358, 467
BseXI	GCAGC	4 cut(s)	135, 811, 1376, 1406
BsgI	GTGCAG	2 cut(s)	284, 780
BshNI	GGYRCC	1 cut(s)	272
BsiHKAI	GWGCWC	1 cut(s)	1469
BsiSI	CCGG	6 cut(s)	196, 252, 270, 669, 828, 1100
BslFI	GGGAC	1 cut(s)	404
BslI	CCNNNNNNNGG	4 cut(s)	221, 510, 924, 1105
BsmAI	GTCTC	9 cut(s)	253, 524, 566, 571, 584, 681, 986, 1247, 1373
BsmBI	CGTCTC	4 cut(s)	253, 566, 584, 1373
BsmFI	GGGAC	1 cut(s)	404
BsmI	GAATGC	1 cut(s)	1366
Bso31I	GGTCTC	1 cut(s)	571
Bsp119I	TTCGAA	1 cut(s)	1261
Bsp1286I	GDGCHC	1 cut(s)	1469
Bsp13I	TCCGGA	1 cut(s)	195
Bsp1407I	TGTACA	1 cut(s)	624
Bsp143I	GATC	5 cut(s)	198, 776, 838, 1129, 1498
BspACI	CCGC	7 cut(s)	126, 160, 163, 639, 783, 925, 1214
BspCNI	CTCAG	3 cut(s)	155, 411, 1390
BspEI	TCCGGA	1 cut(s)	195
BspLI	GGNNCC	4 cut(s)	139, 274, 296, 1052
BspMI	ACCTGC	1 cut(s)	306
BspPI	GGATC	2 cut(s)	206, 784
BspQI	GCTCTTC	1 cut(s)	491
BspT104I	TTCGAA	1 cut(s)	1261
BspT107I	GGYRCC	1 cut(s)	272
BspTNI	GGTCTC	1 cut(s)	571
BsrFI	RCCGGY	1 cut(s)	269
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	2 cut(s)	663, 818
BssAI	RCCGGY	1 cut(s)	269
BssECI	CCNNGG	1 cut(s)	290
BssMI	GATC	5 cut(s)	198, 776, 838, 1129, 1498
BssNI	GRCGYC	1 cut(s)	273
Bst2UI	CCWGG	1 cut(s)	292
Bst4CI	ACNGT	7 cut(s)	109, 241, 595, 675, 706, 932, 1314
Bst6I	CTCTTC	4 cut(s)	59, 376, 491, 864
BstACI	GRCGYC	1 cut(s)	273
BstAPI	GCANNNNNTGC	1 cut(s)	956
BstAUI	TGTACA	1 cut(s)	624
BstBI	TTCGAA	1 cut(s)	1261
BstC8I	GCNNGC	4 cut(s)	271, 303, 465, 1035
BstDEI	CTNAG	5 cut(s)	142, 318, 419, 1011, 1398
BstF5I	GGATG	8 cut(s)	192, 519, 604, 1005, 1222, 1330, 1416, 1492
BstH2I	RGCGCY	2 cut(s)	276, 1389
BstHHI	GCGC	3 cut(s)	210, 275, 1388
BstKTI	GATC	5 cut(s)	201, 779, 841, 1132, 1501
BstMAI	GTCTC	9 cut(s)	253, 524, 566, 571, 584, 681, 986, 1247, 1373
BstMBI	GATC	5 cut(s)	198, 776, 838, 1129, 1498
BstMWI	GCNNNNNNNGC	7 cut(s)	120, 135, 647, 956, 1030, 1394, 1473
BstNI	CCWGG	1 cut(s)	292
BstNSI	RCATGY	2 cut(s)	942, 1037
BstSCI	CCNGG	2 cut(s)	290, 1098
BstV1I	GCAGC	4 cut(s)	135, 811, 1376, 1406
BstX2I	RGATCY	2 cut(s)	198, 1498
BstYI	RGATCY	2 cut(s)	198, 1498
BtgZI	GCGATG	1 cut(s)	1491
BtsCI	GGATG	8 cut(s)	192, 519, 604, 1005, 1222, 1330, 1416, 1492
BtsI	GCAGTG	1 cut(s)	957
BtsIMutI	CAGTG	4 cut(s)	150, 702, 957, 1246
BveI	ACCTGC	1 cut(s)	306
Cac8I	GCNNGC	4 cut(s)	271, 303, 465, 1035
CaiI	CAGNNNCTG	1 cut(s)	1298
CfoI	GCGC	3 cut(s)	210, 275, 1388
Cfr10I	RCCGGY	1 cut(s)	269
Cfr13I	GGNCC	3 cut(s)	148, 795, 1051
Csp6I	GTAC	4 cut(s)	625, 1339, 1371, 1442
CviAII	CATG	6 cut(s)	232, 481, 939, 1034, 1166, 1493
CviQI	GTAC	4 cut(s)	625, 1339, 1371, 1442
DdeI	CTNAG	5 cut(s)	142, 318, 419, 1011, 1398
DinI	GGCGCC	1 cut(s)	274
DpnI	GATC	5 cut(s)	200, 778, 840, 1131, 1500
DpnII	GATC	5 cut(s)	198, 776, 838, 1129, 1498
DraIII	CACNNNGTG	1 cut(s)	307
EaeI	YGGCCR	5 cut(s)	234, 253, 394, 660, 727
Eam1104I	CTCTTC	4 cut(s)	59, 376, 491, 864
EarI	CTCTTC	4 cut(s)	59, 376, 491, 864
EciI	GGCGGA	3 cut(s)	149, 798, 1229
Ecl136II	GAGCTC	1 cut(s)	1467
Eco24I	GRGCYC	1 cut(s)	1469
Eco31I	GGTCTC	1 cut(s)	571
Eco47III	AGCGCT	1 cut(s)	1387
Eco53kI	GAGCTC	1 cut(s)	1467
Eco57I	CTGAAG	4 cut(s)	472, 1178, 1222, 1320
EcoICRI	GAGCTC	1 cut(s)	1467
EcoO109I	RGGNCCY	1 cut(s)	1051
EcoRI	GAATTC	1 cut(s)	1081
EcoRII	CCWGG	1 cut(s)	290
EcoT38I	GRGCYC	1 cut(s)	1469
EgeI	GGCGCC	1 cut(s)	274
EheI	GGCGCC	1 cut(s)	274
Esp3I	CGTCTC	4 cut(s)	253, 566, 584, 1373
FaeI	CATG	6 cut(s)	235, 484, 942, 1037, 1169, 1496
FaqI	GGGAC	1 cut(s)	404
FatI	CATG	6 cut(s)	231, 480, 938, 1033, 1165, 1492
Fnu4HI	GCNGC	6 cut(s)	124, 127, 163, 825, 1365, 1395
FokI	GGATG	8 cut(s)	179, 526, 611, 992, 1229, 1337, 1403, 1499
FriOI	GRGCYC	1 cut(s)	1469
Fsp4HI	GCNGC	6 cut(s)	124, 127, 163, 825, 1365, 1395
FspBI	CTAG	2 cut(s)	968, 1226
GlaI	GCGC	3 cut(s)	209, 274, 1387
GluI	GCNGC	6 cut(s)	124, 127, 163, 825, 1365, 1395
HaeII	RGCGCY	2 cut(s)	276, 1389
HapII	CCGG	6 cut(s)	196, 252, 270, 669, 828, 1100
HhaI	GCGC	3 cut(s)	210, 275, 1388
Hin1I	GRCGYC	1 cut(s)	273
Hin1II	CATG	6 cut(s)	235, 484, 942, 1037, 1169, 1496
Hin6I	GCGC	3 cut(s)	208, 273, 1386
HinP1I	GCGC	3 cut(s)	208, 273, 1386
HincII	GTYRAC	3 cut(s)	15, 94, 244
HindII	GTYRAC	3 cut(s)	15, 94, 244
HindIII	AAGCTT	3 cut(s)	320, 565, 1459
HinfI	GANTC	8 cut(s)	95, 362, 415, 717, 878, 979, 1123, 1413
HpaII	CCGG	6 cut(s)	196, 252, 270, 669, 828, 1100
HphI	GGTGA	3 cut(s)	181, 625, 954
Hpy166II	GTNNAC	8 cut(s)	15, 94, 244, 310, 541, 749, 1205, 1348
Hpy188I	TCNGA	8 cut(s)	73, 358, 420, 433, 491, 847, 1158, 1471
Hpy8I	GTNNAC	8 cut(s)	15, 94, 244, 310, 541, 749, 1205, 1348
Hpy99I	CGWCG	3 cut(s)	10, 221, 224
HpyAV	CCTTC	3 cut(s)	40, 872, 1466
HpyCH4III	ACNGT	7 cut(s)	109, 241, 595, 675, 706, 932, 1314
HpyCH4IV	ACGT	1 cut(s)	246
HpyF10VI	GCNNNNNNNGC	7 cut(s)	120, 135, 647, 956, 1030, 1394, 1473
HpyF3I	CTNAG	5 cut(s)	142, 318, 419, 1011, 1398
HpySE526I	ACGT	1 cut(s)	246
Hsp92I	GRCGYC	1 cut(s)	273
Hsp92II	CATG	6 cut(s)	235, 484, 942, 1037, 1169, 1496
HspAI	GCGC	3 cut(s)	208, 273, 1386
KasI	GGCGCC	1 cut(s)	272
Kpn2I	TCCGGA	1 cut(s)	195
KroI	GCCGGC	1 cut(s)	269
KroNI	GCCGGC	1 cut(s)	271
Kzo9I	GATC	5 cut(s)	198, 776, 838, 1129, 1498
LguI	GCTCTTC	1 cut(s)	491
LmnI	GCTCC	3 cut(s)	143, 1300, 1472
Lsp1109I	GCAGC	4 cut(s)	135, 811, 1376, 1406
LweI	GCATC	6 cut(s)	64, 123, 138, 594, 655, 1207
MaeI	CTAG	2 cut(s)	968, 1226
MaeII	ACGT	1 cut(s)	246
MaeIII	GTNAC	2 cut(s)	700, 941
MalI	GATC	5 cut(s)	200, 778, 840, 1131, 1500
MboI	GATC	5 cut(s)	198, 776, 838, 1129, 1498
MboII	GAAGA	8 cut(s)	46, 193, 253, 363, 478, 881, 1124, 1228
MflI	RGATCY	2 cut(s)	198, 1498
MhlI	GDGCHC	1 cut(s)	1469
MlsI	TGGCCA	2 cut(s)	236, 729
MluNI	TGGCCA	2 cut(s)	236, 729
Mly113I	GGCGCC	1 cut(s)	273
MlyI	GAGTC	4 cut(s)	89, 409, 988, 1407
Mox20I	TGGCCA	2 cut(s)	236, 729
MroI	TCCGGA	1 cut(s)	195
MroNI	GCCGGC	1 cut(s)	269
MroXI	GAANNNNTTC	1 cut(s)	1178
MscI	TGGCCA	2 cut(s)	236, 729
MseI	TTAA	5 cut(s)	801, 912, 990, 1058, 1448
MslI	CAYNNNNRTG	2 cut(s)	950, 1032
Msp20I	TGGCCA	2 cut(s)	236, 729
MspA1I	CMGCKG	2 cut(s)	126, 1397
MspI	CCGG	6 cut(s)	196, 252, 270, 669, 828, 1100
MspR9I	CCNGG	2 cut(s)	292, 1100
Mva1269I	GAATGC	1 cut(s)	1366
MvaI	CCWGG	1 cut(s)	292
MwoI	GCNNNNNNNGC	7 cut(s)	120, 135, 647, 956, 1030, 1394, 1473
NaeI	GCCGGC	1 cut(s)	271
NarI	GGCGCC	1 cut(s)	273
NciI	CCSGG	1 cut(s)	1100
NdeII	GATC	5 cut(s)	198, 776, 838, 1129, 1498
NgoMIV	GCCGGC	1 cut(s)	269
NlaIII	CATG	6 cut(s)	235, 484, 942, 1037, 1169, 1496
NlaIV	GGNNCC	4 cut(s)	139, 274, 296, 1052
NmeAIII	GCCGAG	1 cut(s)	77
NmuCI	GTSAC	2 cut(s)	700, 941
NspI	RCATGY	2 cut(s)	942, 1037
NspV	TTCGAA	1 cut(s)	1261
PaeI	GCATGC	1 cut(s)	1037
PciI	ACATGT	1 cut(s)	938
PciSI	GCTCTTC	1 cut(s)	491
PcsI	WCGNNNNNNNCGW	1 cut(s)	660
PctI	GAATGC	1 cut(s)	1366
PdiI	GCCGGC	1 cut(s)	271
PdmI	GAANNNNTTC	1 cut(s)	1178
PfeI	GAWTC	4 cut(s)	362, 717, 878, 1123
PfoI	TCCNGGA	1 cut(s)	1098
PkrI	GCNGC	6 cut(s)	125, 128, 164, 826, 1366, 1396
PleI	GAGTC	4 cut(s)	89, 409, 987, 1407
PluTI	GGCGCC	1 cut(s)	276
PpsI	GAGTC	4 cut(s)	89, 409, 987, 1407
PscI	ACATGT	1 cut(s)	938
Psp124BI	GAGCTC	1 cut(s)	1469
Psp6I	CCWGG	1 cut(s)	290
PspGI	CCWGG	1 cut(s)	290
PspN4I	GGNNCC	4 cut(s)	139, 274, 296, 1052
PspPI	GGNCC	3 cut(s)	148, 795, 1051
PstNI	CAGNNNCTG	1 cut(s)	1298
PsuI	RGATCY	2 cut(s)	198, 1498
PvuII	CAGCTG	1 cut(s)	1397
RsaI	GTAC	4 cut(s)	626, 1340, 1372, 1443
RsaNI	GTAC	4 cut(s)	625, 1339, 1371, 1442
RseI	CAYNNNNRTG	2 cut(s)	950, 1032
SacI	GAGCTC	1 cut(s)	1469
SapI	GCTCTTC	1 cut(s)	491
SaqAI	TTAA	5 cut(s)	801, 912, 990, 1058, 1448
SatI	GCNGC	6 cut(s)	124, 127, 163, 825, 1365, 1395
Sau3AI	GATC	5 cut(s)	198, 776, 838, 1129, 1498
Sau96I	GGNCC	3 cut(s)	148, 795, 1051
SchI	GAGTC	4 cut(s)	89, 409, 988, 1407
ScrFI	CCNGG	2 cut(s)	292, 1100
SduI	GDGCHC	1 cut(s)	1469
SfaNI	GCATC	6 cut(s)	64, 123, 138, 594, 655, 1207
SfoI	GGCGCC	1 cut(s)	274
SfuI	TTCGAA	1 cut(s)	1261
SmiMI	CAYNNNNRTG	2 cut(s)	950, 1032
SmlI	CTYRAG	3 cut(s)	983, 1141, 1462
SmoI	CTYRAG	3 cut(s)	983, 1141, 1462
SphI	GCATGC	1 cut(s)	1037
SsiI	CCGC	7 cut(s)	126, 160, 163, 639, 783, 925, 1214
SspDI	GGCGCC	1 cut(s)	272
SspI	AATATT	1 cut(s)	902
SspMI	CTAG	2 cut(s)	968, 1226
SstI	GAGCTC	1 cut(s)	1469
StyD4I	CCNGG	2 cut(s)	290, 1098
TaaI	ACNGT	7 cut(s)	109, 241, 595, 675, 706, 932, 1314
TaiI	ACGT	1 cut(s)	249
TaqI	TCGA	6 cut(s)	204, 264, 447, 588, 654, 1261
TatI	WGTACW	3 cut(s)	624, 1338, 1370
TauI	GCSGC	2 cut(s)	129, 165
TfiI	GAWTC	4 cut(s)	362, 717, 878, 1123
Tru1I	TTAA	5 cut(s)	801, 912, 990, 1058, 1448
Tru9I	TTAA	5 cut(s)	801, 912, 990, 1058, 1448
TscAI	CASTG	4 cut(s)	150, 709, 957, 1246
TseFI	GTSAC	2 cut(s)	700, 941
TseI	GCWGC	4 cut(s)	123, 824, 1364, 1394
Tsp45I	GTSAC	2 cut(s)	700, 941
TspDTI	ATGAA	5 cut(s)	22, 375, 576, 756, 1481
TspGWI	ACGGA	1 cut(s)	1265
TspRI	CASTG	4 cut(s)	150, 709, 957, 1246
XapI	RAATTY	3 cut(s)	384, 521, 1081
XbaI	TCTAGA	1 cut(s)	967
XceI	RCATGY	2 cut(s)	942, 1037
XcmI	CCANNNNNNNNNTGG	1 cut(s)	643
XmnI	GAANNNNTTC	1 cut(s)	1178
XspI	CTAG	2 cut(s)	968, 1226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.