Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0015050

Physical Location & Seq

Genomic Coordinates Forward (+)

34707563 .. 34713286

Gene Structure 5724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G023680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGTCGTCGTCGTCGTCGTCGTCTTCTTCGGCAATTCCCGCCCTCACCTTAATCTCTCTCTGGCTCCTCCTCCCCGCACTTTCCCAAGCTGATGACACAGTCTGCATCGTCGGCGCCGGCATCGGCGGCGCTTCCGTGGCCCACTTCCTCCGCGAATACTCTCCCTCCACTCTCAACCTCACGATCCGAATGTTCGAGCGAAACGGCGTCGTCGGGGGACGCATGGCCACTGTCAACGTCTCCGGCGAGTTCTTCGAGGCCGGCGCCTCGATTCTCCACCGCAAGAACTTCCACGCCGTCAACTACACCAGGCTGCTGAACCTCACCGTCAACAGTCCGTCGGATGATTCCGAGGGTTTTGGAATTTGGGATGGGGAGAAGTTCATCTTCAAGTCTCTGAGCGTGAAGTCCAAGCTTCCGTTTGTGAACAGGATTGTTTCGCTGGCGAATTCGCTGCTGCTGTTCGTCCGATACGGCTACTCGCTCGTCAGAATGGATAGATTCGTAGAGACTACTGTGAATAGTTTCTTGAAGTATTATGAGAGCTTAAAGACGAGGCCGGTTTTCGAGTCGGTGGATGAGATGCTTAAATGGGCTGGTTTGCACAATCTCACGGCGAGGACTTTGGCTGAGGAGCTGGCTGATTCTGGCTTGTGTCCCTTGTTGATACAAGAGCTTGTCACTGTCATCACAAGAATCAATTATGGCCAAAATGTCAGTATGAGTGGACTTGGAGGTGCGGTATCATTGGCAGGATCTGGTGGAGGATTATGGTCTATCAAAGGAGGGAACTGGCAGATGGCTTCTGGATTGATCGATCGTTCAGATGTTGCATTGCATCTTCATGAAGAGATAGTATCTATTTCTTCAATTGGGGACTACTACGAACTTAACTCGACCATGGGGAATAGTTATACATGTGATGTTGCTGTAGTTGCTACACCTCTAGATGAGTTGAATGTTGAATTTACTCCTTCAGTTTCAATTCCTAAAAGAGAGTTACAACATACACATGCAACTTTGGTTAGAGGCCTTCTAAATCCTGTATATTTTGGCGTGAATTCAGTGTCAGAACTCCCAGAACTGGTTGCCACGCTTGAGGATCCTGATCTTCCATTCACAAGCATCTCTGTTCTCAAGCAACATGCCGGGAATGATATCACTTACAAGATATTTTCTCGACAACCAATGGCGGAGGCACTTCTAGATAGTATCTTCAGTGCGAGGACGGAGACAATTCGAATAAATTGGGCTGCATACCCTCATTATACTGCTCCTGAAGTATTTGCACCCTTTATCTTGGATGGCCAGCACTTGTACTATGTGAATGCTTTTGAGAATGCAGCAAGCACAATGGAGACGAGCGCTGTTGCGGCTGAGAATGTAGCAAGACTCATCTTGTCAAGATATTTTAGTGGTGTGCCTGTGAGTTTGGATATCTCGAGCTCTGGTTCCAGTGGGGGAGGCGTTCATGTAGATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000098 GO:0001101 GO:0001735 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006082 GO:0006508 GO:0006520 GO:0006575 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009063 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016054 GO:0016491 GO:0016667 GO:0016670 GO:0019538 GO:0019637 GO:0019752 GO:0019941 GO:0023052 GO:0030163 GO:0030327 GO:0030328 GO:0030329 GO:0031090 GO:0032870 GO:0033993 GO:0042219 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044273 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045338 GO:0046395 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0055114 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00900 ko01130 map00900 map01130

Pfam Domains

Protein Families

NAD_binding_8 Prenylcys_lyase

Protein Analysis

494

Amino Acids

53.58

Weight (kDa)

5.26

Isoelectric Point (pI)

34.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	36 - 95	1.6e-10	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	64 - 332	1.7e-16	Flavin containing amine oxidoreductase
Prenylcys_lyase	PF07156	143 - 470	6.4e-104	Prenylcysteine lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63910
fragaria_vesca	FvH4_1g24860 FvH4_1g24860
malus_domestica	MD15G1135000.v1.1
prunus_persica	Prupe.4G274700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0122521
rosa_laevigata	RLG00000018681
rosa_multiflora	Rmu_sc0003832.1_g000006 Rmu_sc0006704.1_g000006
rosa_roxburghii	Rroxscaffold_2G00121550
rosa_rugosa	Rorug02G0239200
rosa_samantha	Rh2AG297900 Rh2BG306600 Rh2CG284700 Rh2DG321500
rosa_wichuraiana	Rw2G023680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	113, 263
AccII	CGCG	1 cut(s)	153
AciI	CCGC	8 cut(s)	39, 75, 126, 151, 280, 740, 1193, 1373
AclWI	GGATC	4 cut(s)	178, 763, 1097, 1110
AcoI	YGGCCR	3 cut(s)	225, 706, 1306
AcsI	RAATTY	4 cut(s)	363, 448, 965, 1060
AcuI	CTGAAG	3 cut(s)	960, 1201, 1299
AcyI	GRCGYC	3 cut(s)	114, 207, 264
AfaI	GTAC	1 cut(s)	1319
AfeI	AGCGCT	1 cut(s)	1366
AfiI	CCNNNNNNNGG	1 cut(s)	1084
AflIII	ACRYGT	1 cut(s)	917
AgsI	TTSAA	6 cut(s)	391, 532, 870, 958, 965, 984
AjnI	CCWGG	1 cut(s)	308
AluBI	AGCT	6 cut(s)	89, 415, 546, 637, 676, 1446
AluI	AGCT	6 cut(s)	89, 415, 546, 637, 676, 1446
Alw21I	GWGCWC	1 cut(s)	1448
Alw26I	GTCTC	5 cut(s)	244, 399, 503, 1226, 1352
AlwI	GGATC	4 cut(s)	178, 763, 1097, 1110
AlwNI	CAGNNNCTG	1 cut(s)	758
Ama87I	CYCGRG	1 cut(s)	1441
Aor51HI	AGCGCT	1 cut(s)	1366
AoxI	GGCC	7 cut(s)	138, 225, 258, 557, 706, 1030, 1306
ApeKI	GCWGC	5 cut(s)	313, 454, 457, 1253, 1343
ApoI	RAATTY	4 cut(s)	363, 448, 965, 1060
Asp700I	GAANNNNTTC	1 cut(s)	524
AspLEI	GCGC	4 cut(s)	116, 131, 266, 1367
AspS9I	GGNCC	1 cut(s)	139
AsuC2I	CCSGG	1 cut(s)	1150
AsuHPI	GGTGA	2 cut(s)	37, 316
AsuII	TTCGAA	1 cut(s)	1240
AvaI	CYCGRG	1 cut(s)	1441
BalI	TGGCCA	3 cut(s)	227, 708, 1308
BamHI	GGATCC	1 cut(s)	1102
BanI	GGYRCC	2 cut(s)	113, 263
BanII	GRGCYC	1 cut(s)	1448
BbsI	GAAGAC	1 cut(s)	15
Bbv12I	GWGCWC	1 cut(s)	1448
BbvCI	CCTCAGC	1 cut(s)	630
BbvI	GCAGC	5 cut(s)	300, 441, 444, 1240, 1355
BccI	CCATC	3 cut(s)	365, 793, 1298
BceAI	ACGGC	4 cut(s)	220, 281, 490, 630
BcgI	CGANNNNNNTGC	2 cut(s)	436, 470
BciT130I	CCWGG	1 cut(s)	310
BcnI	CCSGG	1 cut(s)	1150
BcoDI	GTCTC	5 cut(s)	244, 399, 503, 1226, 1352
BfaI	CTAG	2 cut(s)	947, 1205
BfmI	CTRYAG	1 cut(s)	930
BfoI	RGCGCY	4 cut(s)	117, 132, 267, 1368
BglII	AGATCT	1 cut(s)	1477
BisI	GCNGC	7 cut(s)	127, 314, 455, 458, 1254, 1344, 1374
BlsI	GCNGC	7 cut(s)	128, 315, 456, 459, 1255, 1345, 1375
Bme1390I	CCNGG	2 cut(s)	310, 1150
BmeT110I	CYCGRG	1 cut(s)	1441
BmgT120I	GGNCC	1 cut(s)	139
BmiI	GGNNCC	5 cut(s)	65, 115, 265, 1104, 1453
BmrFI	CCNGG	2 cut(s)	310, 1150
BmsI	GCATC	5 cut(s)	114, 129, 573, 847, 1134
BpiI	GAAGAC	1 cut(s)	15
Bpu10I	CCTNAGC	1 cut(s)	630
Bpu14I	TTCGAA	1 cut(s)	1240
BpuEI	CTTGAG	2 cut(s)	1118, 1121
BpuMI	CCSGG	1 cut(s)	1150
Bsa29I	ATCGAT	1 cut(s)	816
BsaBI	GATNNNNATC	1 cut(s)	1107
BsaHI	GRCGYC	3 cut(s)	114, 207, 264
BsaJI	CCNNGG	3 cut(s)	135, 351, 900
BsaXI	ACNNNNNCTCC	4 cut(s)	149, 179, 726, 756
Bsc4I	CCNNNNNNNGG	1 cut(s)	1084
Bse118I	RCCGGY	3 cut(s)	116, 260, 559
Bse1I	ACTGG	3 cut(s)	797, 1089, 1455
Bse3DI	GCAATG	1 cut(s)	833
Bse8I	GATNNNNATC	1 cut(s)	1107
BseBI	CCWGG	1 cut(s)	310
BseCI	ATCGAT	1 cut(s)	816
BseDI	CCNNGG	3 cut(s)	135, 351, 900
BseGI	GGATG	4 cut(s)	349, 376, 583, 1309
BseJI	GATNNNNATC	1 cut(s)	1107
BseLI	CCNNNNNNNGG	1 cut(s)	1084
BseMI	GCAATG	1 cut(s)	833
BseMII	CTCAG	3 cut(s)	389, 621, 1368
BseNI	ACTGG	3 cut(s)	797, 1089, 1455
BseRI	GAGGAG	3 cut(s)	56, 59, 647
BseXI	GCAGC	5 cut(s)	300, 441, 444, 1240, 1355
Bsh1236I	CGCG	1 cut(s)	153
Bsh1285I	CGRYCG	1 cut(s)	820
BshFI	GGCC	7 cut(s)	140, 227, 260, 559, 708, 1032, 1308
BshNI	GGYRCC	2 cut(s)	113, 263
BshVI	ATCGAT	1 cut(s)	816
BsiEI	CGRYCG	1 cut(s)	820
BsiHKAI	GWGCWC	1 cut(s)	1448
BsiHKCI	CYCGRG	1 cut(s)	1441
BsiSI	CCGG	5 cut(s)	117, 243, 261, 560, 1149
BslFI	GGGAC	3 cut(s)	231, 642, 890
BslI	CCNNNNNNNGG	1 cut(s)	1084
BsmAI	GTCTC	5 cut(s)	244, 399, 503, 1226, 1352
BsmBI	CGTCTC	2 cut(s)	244, 1352
BsmFI	GGGAC	3 cut(s)	231, 642, 890
BsmI	GAATGC	2 cut(s)	1333, 1345
BsnI	GGCC	7 cut(s)	140, 227, 260, 559, 708, 1032, 1308
BsoBI	CYCGRG	1 cut(s)	1441
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	1 cut(s)	1448
Bsp143I	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
Bsp19I	CCATGG	1 cut(s)	900
BspACI	CCGC	8 cut(s)	39, 75, 126, 151, 280, 740, 1193, 1373
BspANI	GGCC	7 cut(s)	140, 227, 260, 559, 708, 1032, 1308
BspCNI	CTCAG	3 cut(s)	390, 622, 1369
BspDI	ATCGAT	1 cut(s)	816
BspFNI	CGCG	1 cut(s)	153
BspHI	TCATGA	1 cut(s)	844
BspLI	GGNNCC	5 cut(s)	65, 115, 265, 1104, 1453
BspPI	GGATC	4 cut(s)	178, 763, 1097, 1110
BspT104I	TTCGAA	1 cut(s)	1240
BspT107I	GGYRCC	2 cut(s)	113, 263
BsrDI	GCAATG	1 cut(s)	833
BsrFI	RCCGGY	3 cut(s)	116, 260, 559
BsrI	ACTGG	3 cut(s)	797, 1089, 1455
BssAI	RCCGGY	3 cut(s)	116, 260, 559
BssECI	CCNNGG	3 cut(s)	135, 351, 900
BssMI	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
BssNI	GRCGYC	3 cut(s)	114, 207, 264
BssT1I	CCWWGG	1 cut(s)	900
Bst2UI	CCWGG	1 cut(s)	310
Bst4CI	ACNGT	6 cut(s)	100, 232, 328, 335, 517, 685
Bst6I	CTCTTC	1 cut(s)	843
BstACI	GRCGYC	3 cut(s)	114, 207, 264
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	6 cut(s)	118, 262, 444, 639, 1310, 1348
BstDEI	CTNAG	3 cut(s)	398, 630, 1377
BstDSI	CCRYGG	2 cut(s)	135, 900
BstF5I	GGATG	4 cut(s)	349, 376, 583, 1309
BstFNI	CGCG	1 cut(s)	153
BstH2I	RGCGCY	4 cut(s)	117, 132, 267, 1368
BstHHI	GCGC	4 cut(s)	116, 131, 266, 1367
BstKTI	GATC	7 cut(s)	186, 758, 816, 820, 1105, 1111, 1480
BstMAI	GTCTC	5 cut(s)	244, 399, 503, 1226, 1352
BstMBI	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
BstMCI	CGRYCG	1 cut(s)	820
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 111, 126, 137, 935, 1373
BstNI	CCWGG	1 cut(s)	310
BstNSI	RCATGY	3 cut(s)	921, 1016, 1148
BstSCI	CCNGG	2 cut(s)	308, 1148
BstSFI	CTRYAG	1 cut(s)	930
BstUI	CGCG	1 cut(s)	153
BstV1I	GCAGC	5 cut(s)	300, 441, 444, 1240, 1355
BstV2I	GAAGAC	1 cut(s)	15
BstX2I	RGATCY	3 cut(s)	755, 1102, 1477
BstYI	RGATCY	3 cut(s)	755, 1102, 1477
Bsu15I	ATCGAT	1 cut(s)	816
BsuRI	GGCC	7 cut(s)	140, 227, 260, 559, 708, 1032, 1308
BsuTUI	ATCGAT	1 cut(s)	816
BtgI	CCRYGG	2 cut(s)	135, 900
BtsCI	GGATG	4 cut(s)	349, 376, 583, 1309
BtsIMutI	CAGTG	5 cut(s)	228, 681, 1071, 1225, 1462
Cac8I	GCNNGC	6 cut(s)	118, 262, 444, 639, 1310, 1348
CaiI	CAGNNNCTG	1 cut(s)	758
CciI	TCATGA	1 cut(s)	844
CfoI	GCGC	4 cut(s)	116, 131, 266, 1367
Cfr10I	RCCGGY	3 cut(s)	116, 260, 559
Cfr13I	GGNCC	1 cut(s)	139
ClaI	ATCGAT	1 cut(s)	816
CseI	GACGC	2 cut(s)	196, 228
Csp6I	GTAC	1 cut(s)	1318
CviAII	CATG	7 cut(s)	223, 845, 901, 918, 1013, 1145, 1472
CviQI	GTAC	1 cut(s)	1318
DdeI	CTNAG	3 cut(s)	398, 630, 1377
DinI	GGCGCC	2 cut(s)	115, 265
DpnI	GATC	7 cut(s)	185, 757, 815, 819, 1104, 1110, 1479
DpnII	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
EaeI	YGGCCR	3 cut(s)	225, 706, 1306
Eam1104I	CTCTTC	1 cut(s)	843
EarI	CTCTTC	1 cut(s)	843
EciI	GGCGGA	1 cut(s)	1208
Ecl136II	GAGCTC	1 cut(s)	1446
Eco130I	CCWWGG	1 cut(s)	900
Eco147I	AGGCCT	1 cut(s)	1032
Eco24I	GRGCYC	1 cut(s)	1448
Eco32I	GATATC	2 cut(s)	1159, 1438
Eco47III	AGCGCT	1 cut(s)	1366
Eco53kI	GAGCTC	1 cut(s)	1446
Eco57I	CTGAAG	3 cut(s)	960, 1201, 1299
Eco88I	CYCGRG	1 cut(s)	1441
EcoICRI	GAGCTC	1 cut(s)	1446
EcoRI	GAATTC	2 cut(s)	448, 1060
EcoRII	CCWGG	1 cut(s)	308
EcoRV	GATATC	2 cut(s)	1159, 1438
EcoT14I	CCWWGG	1 cut(s)	900
EcoT38I	GRGCYC	1 cut(s)	1448
EgeI	GGCGCC	2 cut(s)	115, 265
EheI	GGCGCC	2 cut(s)	115, 265
ErhI	CCWWGG	1 cut(s)	900
Esp3I	CGTCTC	2 cut(s)	244, 1352
FaeI	CATG	7 cut(s)	226, 848, 904, 921, 1016, 1148, 1475
FalI	AAGNNNNNCTT	2 cut(s)	371, 403
FaqI	GGGAC	3 cut(s)	231, 642, 890
FatI	CATG	7 cut(s)	222, 844, 900, 917, 1012, 1144, 1471
FauI	CCCGC	2 cut(s)	46, 82
Fnu4HI	GCNGC	7 cut(s)	127, 314, 455, 458, 1254, 1344, 1374
FokI	GGATG	4 cut(s)	356, 383, 590, 1316
FriOI	GRGCYC	1 cut(s)	1448
Fsp4HI	GCNGC	7 cut(s)	127, 314, 455, 458, 1254, 1344, 1374
FspBI	CTAG	2 cut(s)	947, 1205
GlaI	GCGC	4 cut(s)	115, 130, 265, 1366
GluI	GCNGC	7 cut(s)	127, 314, 455, 458, 1254, 1344, 1374
HaeII	RGCGCY	4 cut(s)	117, 132, 267, 1368
HaeIII	GGCC	7 cut(s)	140, 227, 260, 559, 708, 1032, 1308
HapII	CCGG	5 cut(s)	117, 243, 261, 560, 1149
HgaI	GACGC	2 cut(s)	196, 228
HhaI	GCGC	4 cut(s)	116, 131, 266, 1367
Hin1I	GRCGYC	3 cut(s)	114, 207, 264
Hin1II	CATG	7 cut(s)	226, 848, 904, 921, 1016, 1148, 1475
Hin6I	GCGC	4 cut(s)	114, 129, 264, 1365
HinP1I	GCGC	4 cut(s)	114, 129, 264, 1365
HincII	GTYRAC	3 cut(s)	235, 301, 331
HindII	GTYRAC	3 cut(s)	235, 301, 331
HindIII	AAGCTT	1 cut(s)	413
HinfI	GANTC	7 cut(s)	271, 347, 501, 569, 644, 696, 1392
HpaII	CCGG	5 cut(s)	117, 243, 261, 560, 1149
HphI	GGTGA	2 cut(s)	37, 316
Hpy166II	GTNNAC	5 cut(s)	235, 301, 331, 427, 728
Hpy188I	TCNGA	8 cut(s)	188, 343, 352, 399, 470, 491, 826, 1072
Hpy8I	GTNNAC	5 cut(s)	235, 301, 331, 427, 728
Hpy99I	CGWCG	9 cut(s)	10, 13, 16, 19, 22, 113, 212, 215, 343
HpyAV	CCTTC	2 cut(s)	984, 1043
HpyCH4III	ACNGT	6 cut(s)	100, 232, 328, 335, 517, 685
HpyCH4IV	ACGT	1 cut(s)	237
HpyCH4V	TGCA	8 cut(s)	105, 604, 833, 838, 1016, 1256, 1289, 1343
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 111, 126, 137, 935, 1373
HpyF3I	CTNAG	3 cut(s)	398, 630, 1377
HpySE526I	ACGT	1 cut(s)	237
Hsp92I	GRCGYC	3 cut(s)	114, 207, 264
Hsp92II	CATG	7 cut(s)	226, 848, 904, 921, 1016, 1148, 1475
HspAI	GCGC	4 cut(s)	114, 129, 264, 1365
KasI	GGCGCC	2 cut(s)	113, 263
KroI	GCCGGC	2 cut(s)	116, 260
KroNI	GCCGGC	2 cut(s)	118, 262
Kzo9I	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
LmnI	GCTCC	3 cut(s)	69, 634, 1279
Lsp1109I	GCAGC	5 cut(s)	300, 441, 444, 1240, 1355
LweI	GCATC	5 cut(s)	114, 129, 573, 847, 1134
MaeI	CTAG	2 cut(s)	947, 1205
MaeII	ACGT	1 cut(s)	237
MaeIII	GTNAC	2 cut(s)	679, 999
MalI	GATC	7 cut(s)	185, 757, 815, 819, 1104, 1110, 1479
MboI	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
MboII	GAAGA	9 cut(s)	15, 18, 244, 379, 833, 858, 860, 1103, 1207
MfeI	CAATTG	1 cut(s)	870
MflI	RGATCY	3 cut(s)	755, 1102, 1477
MhlI	GDGCHC	1 cut(s)	1448
MlsI	TGGCCA	3 cut(s)	227, 708, 1308
MluNI	TGGCCA	3 cut(s)	227, 708, 1308
Mly113I	GGCGCC	2 cut(s)	114, 264
MlyI	GAGTC	2 cut(s)	578, 1386
MmeI	TCCRAC	1 cut(s)	321
Mox20I	TGGCCA	3 cut(s)	227, 708, 1308
MroNI	GCCGGC	2 cut(s)	116, 260
MroXI	GAANNNNTTC	1 cut(s)	524
MscI	TGGCCA	3 cut(s)	227, 708, 1308
MseI	TTAA	4 cut(s)	50, 548, 588, 891
MslI	CAYNNNNRTG	2 cut(s)	843, 1011
Msp20I	TGGCCA	3 cut(s)	227, 708, 1308
MspI	CCGG	5 cut(s)	117, 243, 261, 560, 1149
MspR9I	CCNGG	2 cut(s)	310, 1150
MunI	CAATTG	1 cut(s)	870
Mva1269I	GAATGC	2 cut(s)	1333, 1345
MvaI	CCWGG	1 cut(s)	310
MvnI	CGCG	1 cut(s)	153
MwoI	GCNNNNNNNGC	6 cut(s)	38, 111, 126, 137, 935, 1373
NaeI	GCCGGC	2 cut(s)	118, 262
NarI	GGCGCC	2 cut(s)	114, 264
NciI	CCSGG	1 cut(s)	1150
NcoI	CCATGG	1 cut(s)	900
NdeII	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
NgoMIV	GCCGGC	2 cut(s)	116, 260
NlaIII	CATG	7 cut(s)	226, 848, 904, 921, 1016, 1148, 1475
NlaIV	GGNNCC	5 cut(s)	65, 115, 265, 1104, 1453
NmuCI	GTSAC	1 cut(s)	679
NspI	RCATGY	3 cut(s)	921, 1016, 1148
NspV	TTCGAA	1 cut(s)	1240
PaeR7I	CTCGAG	1 cut(s)	1441
PagI	TCATGA	1 cut(s)	844
PceI	AGGCCT	1 cut(s)	1032
PciI	ACATGT	1 cut(s)	917
PcsI	WCGNNNNNNNCGW	4 cut(s)	11, 14, 17, 243
PctI	GAATGC	2 cut(s)	1333, 1345
PdiI	GCCGGC	2 cut(s)	118, 262
PdmI	GAANNNNTTC	1 cut(s)	524
PfeI	GAWTC	5 cut(s)	271, 347, 501, 644, 696
PflFI	GACNNNGTC	1 cut(s)	98
PkrI	GCNGC	7 cut(s)	128, 315, 456, 459, 1255, 1345, 1375
Ple19I	CGATCG	1 cut(s)	820
PleI	GAGTC	2 cut(s)	577, 1386
PluTI	GGCGCC	2 cut(s)	117, 267
PpsI	GAGTC	2 cut(s)	577, 1386
PscI	ACATGT	1 cut(s)	917
Psp124BI	GAGCTC	1 cut(s)	1448
Psp6I	CCWGG	1 cut(s)	308
PspGI	CCWGG	1 cut(s)	308
PspN4I	GGNNCC	5 cut(s)	65, 115, 265, 1104, 1453
PspPI	GGNCC	1 cut(s)	139
PstNI	CAGNNNCTG	1 cut(s)	758
PsuI	RGATCY	3 cut(s)	755, 1102, 1477
PsyI	GACNNNGTC	1 cut(s)	98
PvuI	CGATCG	1 cut(s)	820
RsaI	GTAC	1 cut(s)	1319
RsaNI	GTAC	1 cut(s)	1318
RseI	CAYNNNNRTG	2 cut(s)	843, 1011
SacI	GAGCTC	1 cut(s)	1448
SaqAI	TTAA	4 cut(s)	50, 548, 588, 891
SatI	GCNGC	7 cut(s)	127, 314, 455, 458, 1254, 1344, 1374
Sau3AI	GATC	7 cut(s)	183, 755, 813, 817, 1102, 1108, 1477
Sau96I	GGNCC	1 cut(s)	139
SchI	GAGTC	2 cut(s)	578, 1386
ScrFI	CCNGG	2 cut(s)	310, 1150
SduI	GDGCHC	1 cut(s)	1448
SfaNI	GCATC	5 cut(s)	114, 129, 573, 847, 1134
SfcI	CTRYAG	1 cut(s)	930
SfoI	GGCGCC	2 cut(s)	115, 265
Sfr274I	CTCGAG	1 cut(s)	1441
SfuI	TTCGAA	1 cut(s)	1240
SlaI	CTCGAG	1 cut(s)	1441
SmiMI	CAYNNNNRTG	2 cut(s)	843, 1011
SmlI	CTYRAG	3 cut(s)	1097, 1136, 1441
SmoI	CTYRAG	3 cut(s)	1097, 1136, 1441
SseBI	AGGCCT	1 cut(s)	1032
SsiI	CCGC	8 cut(s)	39, 75, 126, 151, 280, 740, 1193, 1373
SspDI	GGCGCC	2 cut(s)	113, 263
SspMI	CTAG	2 cut(s)	947, 1205
SstI	GAGCTC	1 cut(s)	1448
StuI	AGGCCT	1 cut(s)	1032
StyD4I	CCNGG	2 cut(s)	308, 1148
StyI	CCWWGG	1 cut(s)	900
TaaI	ACNGT	6 cut(s)	100, 232, 328, 335, 517, 685
TaiI	ACGT	1 cut(s)	240
TaqI	TCGA	9 cut(s)	195, 255, 269, 567, 816, 896, 1180, 1240, 1442
TatI	WGTACW	1 cut(s)	1317
TauI	GCSGC	2 cut(s)	129, 1376
TfiI	GAWTC	5 cut(s)	271, 347, 501, 644, 696
Tru1I	TTAA	4 cut(s)	50, 548, 588, 891
Tru9I	TTAA	4 cut(s)	50, 548, 588, 891
TscAI	CASTG	5 cut(s)	235, 688, 1071, 1225, 1462
TseFI	GTSAC	1 cut(s)	679
TseI	GCWGC	5 cut(s)	313, 454, 457, 1253, 1343
Tsp45I	GTSAC	1 cut(s)	679
TspDTI	ATGAA	4 cut(s)	373, 833, 861, 1460
TspGWI	ACGGA	4 cut(s)	124, 327, 408, 1244
TspRI	CASTG	5 cut(s)	235, 688, 1071, 1225, 1462
Tth111I	GACNNNGTC	1 cut(s)	98
XapI	RAATTY	4 cut(s)	363, 448, 965, 1060
XbaI	TCTAGA	2 cut(s)	946, 1204
XceI	RCATGY	3 cut(s)	921, 1016, 1148
XhoI	CTCGAG	1 cut(s)	1441
XmnI	GAANNNNTTC	1 cut(s)	524
XspI	CTAG	2 cut(s)	947, 1205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.