Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0015050

Physical Location & Seq

Genomic Coordinates Forward (+)

36929571 .. 36935580

Gene Structure 6010 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG297900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGTCGTCGTCGTCGTCTTCTTCGGCAATTCCCGCCCTCACCTTAATCTCTCTCTGGCTCCTCCTCCCCGCACTTTCCCAAGCTGATGACACAGTCTGCATCGTCGGCGCCGGCATCGGCGGCGCTTCCGTGGCCCACTTCCTCCGCGAATACTCTCCCTCTACTCTCAACCTCACGATCCGAATGTTCGAGCGAAACGGCGTCGTCGGGGGACGCATGGCCACTGTGAACGTCTCCGGCGAGTTCTTCGAGGCCGGCGCCTCGATTCTCCACCCCAAGAACTTCTACGCCGTCAACTACACCAGGCTGCTGAACCTCACGGTCAACAGTCCGTCGGATGATTCCGAGGGTTTTGGAATTTGGGATGGGGAGAAGTTCATCTTCAAGACTCTGAGCGTGAAGTCCAAGCTTCCGTTTGTGAACAGGATTGTTTCGCTGGCGAATTCGCTGCTGCTGTTCGTCCGATACGGCTACTCGCTCATCAGAATGGATAGATTCGTAGAGACTACTGTGAATAGTTTCTTGAAGTATTATGAGAGCTTAAAGACGAGGCCGGTTTTCGAGTCGGTGGATGAGATGCTTAAATGGGCTGGTTTGCACAATCTCACGGCGAGGACTTTGGCTGAGGAGCTGGCTGATTCTGGCTTGTGTCCCTTGTTGATACAAGAGCTCGTCACTGTCATCACAAGAATCAATTATGGCCAAAATGTCAGTATGAGTGGACTTGGAGGTGCGGTATCATTGGCAGGATCTGGTGGAGGATTATGGTCTATCAAAGGAGGGAACTGGCAGATGGCTTCTGGATTGATCGATCGTTCAGATGTTGCATTGCATCTTCATGAAGAGATAGAATCTATTTCTTCAATTGGGGACTACTACGAACTTAACTCTACCGTGGGGAATAGTTATACATGTGATGTTGCTGTAGTTGCTACACCTCTAGATGAGTTGAATGTTGAATTTACTCCTTCAGTTTCAATTCCTAAAAGAGAGTTACAACATACACATGCAACTTTGGTTAGAGGCCTTCTAAATCCTGTATATTTTGGCGTGAATTCAGTGTCAGAACTCGCAGAACTGGTTGCCACGCTTGAGGATCCTGATCTTCCATTCACAAGCATCTCTGTTCTCAAGCAACATGCCGGGAATGATATCACTTACAAGATATTTTCTCGACAACCAATGGTGGAGGCACTTCTAGATAGTATCTTCAGTGCGAGGACGGAGACAATTCGAATAAATTGGGCTGCATACCCTCATTATACTGCTCCTGAAGTATTTGCACCCTTTATCTTGGATGGCCAGCACTTGTACTATGTGAATGCTTTTGAGAATGCAGCAAGCACAATGGAGACGAGCGCTGTTGCGGCTGAGAATGTAGCAAGACTCATCTTGTCAAGATATTTTAGTGGTGTGCCTGTGAGTTTGGATATCTCGAGCTCTGGTTCCAGTGGGGGAGGCGTTCATGTAGATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000098 GO:0001101 GO:0001735 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006082 GO:0006508 GO:0006520 GO:0006575 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009063 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016054 GO:0016491 GO:0016667 GO:0016670 GO:0019538 GO:0019637 GO:0019752 GO:0019941 GO:0023052 GO:0030163 GO:0030327 GO:0030328 GO:0030329 GO:0031090 GO:0032870 GO:0033993 GO:0042219 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044273 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045338 GO:0046395 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0055114 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00900 ko01130 map00900 map01130

Pfam Domains

Protein Families

NAD_binding_8 Prenylcys_lyase

Protein Analysis

492

Amino Acids

53.4

Weight (kDa)

5.08

Isoelectric Point (pI)

35.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	34 - 93	8e-11	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	62 - 330	9.4e-17	Flavin containing amine oxidoreductase
Prenylcys_lyase	PF07156	141 - 468	2.3e-103	Prenylcysteine lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63910
fragaria_vesca	FvH4_1g24860 FvH4_1g24860
malus_domestica	MD15G1135000.v1.1
prunus_persica	Prupe.4G274700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0122521
rosa_laevigata	RLG00000018681
rosa_multiflora	Rmu_sc0003832.1_g000006 Rmu_sc0006704.1_g000006
rosa_roxburghii	Rroxscaffold_2G00121550
rosa_rugosa	Rorug02G0239200
rosa_samantha	Rh2AG297900 Rh2BG306600 Rh2CG284700 Rh2DG321500
rosa_wichuraiana	Rw2G023680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	107, 257
AccII	CGCG	1 cut(s)	147
AciI	CCGC	6 cut(s)	33, 69, 120, 145, 734, 1367
AclWI	GGATC	4 cut(s)	172, 757, 1091, 1104
AcoI	YGGCCR	3 cut(s)	219, 700, 1300
AcsI	RAATTY	4 cut(s)	357, 442, 959, 1054
AcuI	CTGAAG	3 cut(s)	954, 1195, 1293
AcyI	GRCGYC	3 cut(s)	108, 201, 258
AfaI	GTAC	1 cut(s)	1313
AfeI	AGCGCT	1 cut(s)	1360
AflIII	ACRYGT	1 cut(s)	911
AgsI	TTSAA	6 cut(s)	385, 526, 864, 952, 959, 978
AjnI	CCWGG	1 cut(s)	302
AluBI	AGCT	6 cut(s)	83, 409, 540, 631, 670, 1440
AluI	AGCT	6 cut(s)	83, 409, 540, 631, 670, 1440
Alw21I	GWGCWC	2 cut(s)	672, 1442
Alw26I	GTCTC	4 cut(s)	238, 497, 1220, 1346
AlwI	GGATC	4 cut(s)	172, 757, 1091, 1104
AlwNI	CAGNNNCTG	1 cut(s)	752
Ama87I	CYCGRG	1 cut(s)	1435
Aor51HI	AGCGCT	1 cut(s)	1360
AoxI	GGCC	7 cut(s)	132, 219, 252, 551, 700, 1024, 1300
ApeKI	GCWGC	5 cut(s)	307, 448, 451, 1247, 1337
ApoI	RAATTY	4 cut(s)	357, 442, 959, 1054
Asp700I	GAANNNNTTC	1 cut(s)	518
AspLEI	GCGC	4 cut(s)	110, 125, 260, 1361
AspS9I	GGNCC	1 cut(s)	133
AsuC2I	CCSGG	1 cut(s)	1144
AsuHPI	GGTGA	1 cut(s)	31
AsuII	TTCGAA	1 cut(s)	1234
AvaI	CYCGRG	1 cut(s)	1435
BalI	TGGCCA	3 cut(s)	221, 702, 1302
BamHI	GGATCC	1 cut(s)	1096
BanI	GGYRCC	2 cut(s)	107, 257
BanII	GRGCYC	2 cut(s)	672, 1442
BbsI	GAAGAC	1 cut(s)	9
Bbv12I	GWGCWC	2 cut(s)	672, 1442
BbvCI	CCTCAGC	1 cut(s)	624
BbvI	GCAGC	5 cut(s)	294, 435, 438, 1234, 1349
BccI	CCATC	3 cut(s)	359, 787, 1292
BceAI	ACGGC	4 cut(s)	214, 275, 484, 624
BcgI	CGANNNNNNTGC	2 cut(s)	430, 464
BciT130I	CCWGG	1 cut(s)	304
BcnI	CCSGG	1 cut(s)	1144
BcoDI	GTCTC	4 cut(s)	238, 497, 1220, 1346
BfaI	CTAG	2 cut(s)	941, 1199
BfmI	CTRYAG	1 cut(s)	924
BfoI	RGCGCY	4 cut(s)	111, 126, 261, 1362
BglII	AGATCT	1 cut(s)	1471
BisI	GCNGC	7 cut(s)	121, 308, 449, 452, 1248, 1338, 1368
BlsI	GCNGC	7 cut(s)	122, 309, 450, 453, 1249, 1339, 1369
Bme1390I	CCNGG	2 cut(s)	304, 1144
BmeT110I	CYCGRG	1 cut(s)	1435
BmgT120I	GGNCC	1 cut(s)	133
BmiI	GGNNCC	5 cut(s)	59, 109, 259, 1098, 1447
BmrFI	CCNGG	2 cut(s)	304, 1144
BmsI	GCATC	5 cut(s)	108, 123, 567, 841, 1128
BpiI	GAAGAC	1 cut(s)	9
Bpu10I	CCTNAGC	1 cut(s)	624
Bpu14I	TTCGAA	1 cut(s)	1234
BpuEI	CTTGAG	2 cut(s)	1112, 1115
BpuMI	CCSGG	1 cut(s)	1144
Bsa29I	ATCGAT	1 cut(s)	810
BsaBI	GATNNNNATC	1 cut(s)	1101
BsaHI	GRCGYC	3 cut(s)	108, 201, 258
BsaJI	CCNNGG	3 cut(s)	129, 345, 894
BsaXI	ACNNNNNCTCC	2 cut(s)	720, 750
Bse118I	RCCGGY	3 cut(s)	110, 254, 553
Bse1I	ACTGG	3 cut(s)	791, 1083, 1449
Bse3DI	GCAATG	1 cut(s)	827
Bse8I	GATNNNNATC	1 cut(s)	1101
BseBI	CCWGG	1 cut(s)	304
BseCI	ATCGAT	1 cut(s)	810
BseDI	CCNNGG	3 cut(s)	129, 345, 894
BseGI	GGATG	4 cut(s)	343, 370, 577, 1303
BseJI	GATNNNNATC	1 cut(s)	1101
BseMI	GCAATG	1 cut(s)	827
BseMII	CTCAG	3 cut(s)	383, 615, 1362
BseNI	ACTGG	3 cut(s)	791, 1083, 1449
BseRI	GAGGAG	3 cut(s)	50, 53, 641
BseXI	GCAGC	5 cut(s)	294, 435, 438, 1234, 1349
Bsh1236I	CGCG	1 cut(s)	147
Bsh1285I	CGRYCG	1 cut(s)	814
BshFI	GGCC	7 cut(s)	134, 221, 254, 553, 702, 1026, 1302
BshNI	GGYRCC	2 cut(s)	107, 257
BshVI	ATCGAT	1 cut(s)	810
BsiEI	CGRYCG	1 cut(s)	814
BsiHKAI	GWGCWC	2 cut(s)	672, 1442
BsiHKCI	CYCGRG	1 cut(s)	1435
BsiSI	CCGG	5 cut(s)	111, 237, 255, 554, 1143
BslFI	GGGAC	3 cut(s)	225, 636, 884
BsmAI	GTCTC	4 cut(s)	238, 497, 1220, 1346
BsmBI	CGTCTC	2 cut(s)	238, 1346
BsmFI	GGGAC	3 cut(s)	225, 636, 884
BsmI	GAATGC	2 cut(s)	1327, 1339
BsnI	GGCC	7 cut(s)	134, 221, 254, 553, 702, 1026, 1302
BsoBI	CYCGRG	1 cut(s)	1435
Bsp119I	TTCGAA	1 cut(s)	1234
Bsp1286I	GDGCHC	2 cut(s)	672, 1442
Bsp143I	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
BspACI	CCGC	6 cut(s)	33, 69, 120, 145, 734, 1367
BspANI	GGCC	7 cut(s)	134, 221, 254, 553, 702, 1026, 1302
BspCNI	CTCAG	3 cut(s)	384, 616, 1363
BspDI	ATCGAT	1 cut(s)	810
BspFNI	CGCG	1 cut(s)	147
BspHI	TCATGA	1 cut(s)	838
BspLI	GGNNCC	5 cut(s)	59, 109, 259, 1098, 1447
BspPI	GGATC	4 cut(s)	172, 757, 1091, 1104
BspT104I	TTCGAA	1 cut(s)	1234
BspT107I	GGYRCC	2 cut(s)	107, 257
BsrDI	GCAATG	1 cut(s)	827
BsrFI	RCCGGY	3 cut(s)	110, 254, 553
BsrI	ACTGG	3 cut(s)	791, 1083, 1449
BssAI	RCCGGY	3 cut(s)	110, 254, 553
BssECI	CCNNGG	3 cut(s)	129, 345, 894
BssMI	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
BssNI	GRCGYC	3 cut(s)	108, 201, 258
Bst2UI	CCWGG	1 cut(s)	304
Bst4CI	ACNGT	7 cut(s)	94, 226, 322, 329, 511, 679, 895
Bst6I	CTCTTC	1 cut(s)	837
BstACI	GRCGYC	3 cut(s)	108, 201, 258
BstBI	TTCGAA	1 cut(s)	1234
BstC8I	GCNNGC	6 cut(s)	112, 256, 438, 633, 1304, 1342
BstDEI	CTNAG	3 cut(s)	392, 624, 1371
BstDSI	CCRYGG	2 cut(s)	129, 894
BstF5I	GGATG	4 cut(s)	343, 370, 577, 1303
BstFNI	CGCG	1 cut(s)	147
BstH2I	RGCGCY	4 cut(s)	111, 126, 261, 1362
BstHHI	GCGC	4 cut(s)	110, 125, 260, 1361
BstKTI	GATC	7 cut(s)	180, 752, 810, 814, 1099, 1105, 1474
BstMAI	GTCTC	4 cut(s)	238, 497, 1220, 1346
BstMBI	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
BstMCI	CGRYCG	1 cut(s)	814
BstMWI	GCNNNNNNNGC	6 cut(s)	32, 105, 120, 131, 929, 1367
BstNI	CCWGG	1 cut(s)	304
BstNSI	RCATGY	3 cut(s)	915, 1010, 1142
BstSCI	CCNGG	2 cut(s)	302, 1142
BstSFI	CTRYAG	1 cut(s)	924
BstUI	CGCG	1 cut(s)	147
BstV1I	GCAGC	5 cut(s)	294, 435, 438, 1234, 1349
BstV2I	GAAGAC	1 cut(s)	9
BstX2I	RGATCY	3 cut(s)	749, 1096, 1471
BstYI	RGATCY	3 cut(s)	749, 1096, 1471
Bsu15I	ATCGAT	1 cut(s)	810
BsuRI	GGCC	7 cut(s)	134, 221, 254, 553, 702, 1026, 1302
BsuTUI	ATCGAT	1 cut(s)	810
BtgI	CCRYGG	2 cut(s)	129, 894
BtsCI	GGATG	4 cut(s)	343, 370, 577, 1303
BtsIMutI	CAGTG	5 cut(s)	222, 675, 1065, 1219, 1456
Cac8I	GCNNGC	6 cut(s)	112, 256, 438, 633, 1304, 1342
CaiI	CAGNNNCTG	1 cut(s)	752
CciI	TCATGA	1 cut(s)	838
CfoI	GCGC	4 cut(s)	110, 125, 260, 1361
Cfr10I	RCCGGY	3 cut(s)	110, 254, 553
Cfr13I	GGNCC	1 cut(s)	133
ClaI	ATCGAT	1 cut(s)	810
CseI	GACGC	2 cut(s)	190, 222
Csp6I	GTAC	1 cut(s)	1312
CviAII	CATG	6 cut(s)	217, 839, 912, 1007, 1139, 1466
CviQI	GTAC	1 cut(s)	1312
DdeI	CTNAG	3 cut(s)	392, 624, 1371
DinI	GGCGCC	2 cut(s)	109, 259
DpnI	GATC	7 cut(s)	179, 751, 809, 813, 1098, 1104, 1473
DpnII	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
EaeI	YGGCCR	3 cut(s)	219, 700, 1300
Eam1104I	CTCTTC	1 cut(s)	837
EarI	CTCTTC	1 cut(s)	837
Ecl136II	GAGCTC	2 cut(s)	670, 1440
Eco147I	AGGCCT	1 cut(s)	1026
Eco24I	GRGCYC	2 cut(s)	672, 1442
Eco32I	GATATC	2 cut(s)	1153, 1432
Eco47III	AGCGCT	1 cut(s)	1360
Eco53kI	GAGCTC	2 cut(s)	670, 1440
Eco57I	CTGAAG	3 cut(s)	954, 1195, 1293
Eco88I	CYCGRG	1 cut(s)	1435
EcoICRI	GAGCTC	2 cut(s)	670, 1440
EcoRI	GAATTC	2 cut(s)	442, 1054
EcoRII	CCWGG	1 cut(s)	302
EcoRV	GATATC	2 cut(s)	1153, 1432
EcoT38I	GRGCYC	2 cut(s)	672, 1442
EgeI	GGCGCC	2 cut(s)	109, 259
EheI	GGCGCC	2 cut(s)	109, 259
Esp3I	CGTCTC	2 cut(s)	238, 1346
FaeI	CATG	6 cut(s)	220, 842, 915, 1010, 1142, 1469
FalI	AAGNNNNNCTT	2 cut(s)	365, 397
FaqI	GGGAC	3 cut(s)	225, 636, 884
FatI	CATG	6 cut(s)	216, 838, 911, 1006, 1138, 1465
FauI	CCCGC	2 cut(s)	40, 76
Fnu4HI	GCNGC	7 cut(s)	121, 308, 449, 452, 1248, 1338, 1368
FokI	GGATG	4 cut(s)	350, 377, 584, 1310
FriOI	GRGCYC	2 cut(s)	672, 1442
Fsp4HI	GCNGC	7 cut(s)	121, 308, 449, 452, 1248, 1338, 1368
FspBI	CTAG	2 cut(s)	941, 1199
GlaI	GCGC	4 cut(s)	109, 124, 259, 1360
GluI	GCNGC	7 cut(s)	121, 308, 449, 452, 1248, 1338, 1368
HaeII	RGCGCY	4 cut(s)	111, 126, 261, 1362
HaeIII	GGCC	7 cut(s)	134, 221, 254, 553, 702, 1026, 1302
HapII	CCGG	5 cut(s)	111, 237, 255, 554, 1143
HgaI	GACGC	2 cut(s)	190, 222
HhaI	GCGC	4 cut(s)	110, 125, 260, 1361
Hin1I	GRCGYC	3 cut(s)	108, 201, 258
Hin1II	CATG	6 cut(s)	220, 842, 915, 1010, 1142, 1469
Hin6I	GCGC	4 cut(s)	108, 123, 258, 1359
HinP1I	GCGC	4 cut(s)	108, 123, 258, 1359
HincII	GTYRAC	2 cut(s)	295, 325
HindII	GTYRAC	2 cut(s)	295, 325
HindIII	AAGCTT	1 cut(s)	407
HinfI	GANTC	9 cut(s)	265, 341, 388, 495, 563, 638, 690, 851, 1386
HpaII	CCGG	5 cut(s)	111, 237, 255, 554, 1143
HphI	GGTGA	1 cut(s)	31
Hpy166II	GTNNAC	5 cut(s)	229, 295, 325, 421, 722
Hpy188I	TCNGA	8 cut(s)	182, 337, 346, 393, 464, 485, 820, 1066
Hpy8I	GTNNAC	5 cut(s)	229, 295, 325, 421, 722
Hpy99I	CGWCG	7 cut(s)	10, 13, 16, 107, 206, 209, 337
HpyAV	CCTTC	2 cut(s)	978, 1037
HpyCH4III	ACNGT	7 cut(s)	94, 226, 322, 329, 511, 679, 895
HpyCH4IV	ACGT	1 cut(s)	231
HpyCH4V	TGCA	8 cut(s)	99, 598, 827, 832, 1010, 1250, 1283, 1337
HpyF10VI	GCNNNNNNNGC	6 cut(s)	32, 105, 120, 131, 929, 1367
HpyF3I	CTNAG	3 cut(s)	392, 624, 1371
HpySE526I	ACGT	1 cut(s)	231
Hsp92I	GRCGYC	3 cut(s)	108, 201, 258
Hsp92II	CATG	6 cut(s)	220, 842, 915, 1010, 1142, 1469
HspAI	GCGC	4 cut(s)	108, 123, 258, 1359
KasI	GGCGCC	2 cut(s)	107, 257
KroI	GCCGGC	2 cut(s)	110, 254
KroNI	GCCGGC	2 cut(s)	112, 256
Kzo9I	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
LmnI	GCTCC	3 cut(s)	63, 628, 1273
Lsp1109I	GCAGC	5 cut(s)	294, 435, 438, 1234, 1349
LweI	GCATC	5 cut(s)	108, 123, 567, 841, 1128
MaeI	CTAG	2 cut(s)	941, 1199
MaeII	ACGT	1 cut(s)	231
MaeIII	GTNAC	2 cut(s)	673, 993
MalI	GATC	7 cut(s)	179, 751, 809, 813, 1098, 1104, 1473
MboI	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
MboII	GAAGA	9 cut(s)	9, 12, 238, 373, 827, 852, 854, 1097, 1201
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	3 cut(s)	749, 1096, 1471
MhlI	GDGCHC	2 cut(s)	672, 1442
MlsI	TGGCCA	3 cut(s)	221, 702, 1302
MluNI	TGGCCA	3 cut(s)	221, 702, 1302
Mly113I	GGCGCC	2 cut(s)	108, 258
MlyI	GAGTC	3 cut(s)	382, 572, 1380
MmeI	TCCRAC	1 cut(s)	315
Mox20I	TGGCCA	3 cut(s)	221, 702, 1302
MroNI	GCCGGC	2 cut(s)	110, 254
MroXI	GAANNNNTTC	1 cut(s)	518
MscI	TGGCCA	3 cut(s)	221, 702, 1302
MseI	TTAA	4 cut(s)	44, 542, 582, 885
MslI	CAYNNNNRTG	3 cut(s)	485, 837, 1005
Msp20I	TGGCCA	3 cut(s)	221, 702, 1302
MspI	CCGG	5 cut(s)	111, 237, 255, 554, 1143
MspR9I	CCNGG	2 cut(s)	304, 1144
MunI	CAATTG	1 cut(s)	864
Mva1269I	GAATGC	2 cut(s)	1327, 1339
MvaI	CCWGG	1 cut(s)	304
MvnI	CGCG	1 cut(s)	147
MwoI	GCNNNNNNNGC	6 cut(s)	32, 105, 120, 131, 929, 1367
NaeI	GCCGGC	2 cut(s)	112, 256
NarI	GGCGCC	2 cut(s)	108, 258
NciI	CCSGG	1 cut(s)	1144
NdeII	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
NgoMIV	GCCGGC	2 cut(s)	110, 254
NlaIII	CATG	6 cut(s)	220, 842, 915, 1010, 1142, 1469
NlaIV	GGNNCC	5 cut(s)	59, 109, 259, 1098, 1447
NmuCI	GTSAC	1 cut(s)	673
NspI	RCATGY	3 cut(s)	915, 1010, 1142
NspV	TTCGAA	1 cut(s)	1234
PaeR7I	CTCGAG	1 cut(s)	1435
PagI	TCATGA	1 cut(s)	838
PceI	AGGCCT	1 cut(s)	1026
PciI	ACATGT	1 cut(s)	911
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 237
PctI	GAATGC	2 cut(s)	1327, 1339
PdiI	GCCGGC	2 cut(s)	112, 256
PdmI	GAANNNNTTC	1 cut(s)	518
PfeI	GAWTC	6 cut(s)	265, 341, 495, 638, 690, 851
PflFI	GACNNNGTC	1 cut(s)	92
PkrI	GCNGC	7 cut(s)	122, 309, 450, 453, 1249, 1339, 1369
Ple19I	CGATCG	1 cut(s)	814
PleI	GAGTC	3 cut(s)	382, 571, 1380
PluTI	GGCGCC	2 cut(s)	111, 261
PpsI	GAGTC	3 cut(s)	382, 571, 1380
PscI	ACATGT	1 cut(s)	911
Psp124BI	GAGCTC	2 cut(s)	672, 1442
Psp6I	CCWGG	1 cut(s)	302
PspGI	CCWGG	1 cut(s)	302
PspN4I	GGNNCC	5 cut(s)	59, 109, 259, 1098, 1447
PspPI	GGNCC	1 cut(s)	133
PstNI	CAGNNNCTG	1 cut(s)	752
PsuI	RGATCY	3 cut(s)	749, 1096, 1471
PsyI	GACNNNGTC	1 cut(s)	92
PvuI	CGATCG	1 cut(s)	814
RsaI	GTAC	1 cut(s)	1313
RsaNI	GTAC	1 cut(s)	1312
RseI	CAYNNNNRTG	3 cut(s)	485, 837, 1005
SacI	GAGCTC	2 cut(s)	672, 1442
SaqAI	TTAA	4 cut(s)	44, 542, 582, 885
SatI	GCNGC	7 cut(s)	121, 308, 449, 452, 1248, 1338, 1368
Sau3AI	GATC	7 cut(s)	177, 749, 807, 811, 1096, 1102, 1471
Sau96I	GGNCC	1 cut(s)	133
SchI	GAGTC	3 cut(s)	382, 572, 1380
ScrFI	CCNGG	2 cut(s)	304, 1144
SduI	GDGCHC	2 cut(s)	672, 1442
SfaNI	GCATC	5 cut(s)	108, 123, 567, 841, 1128
SfcI	CTRYAG	1 cut(s)	924
SfoI	GGCGCC	2 cut(s)	109, 259
Sfr274I	CTCGAG	1 cut(s)	1435
SfuI	TTCGAA	1 cut(s)	1234
SlaI	CTCGAG	1 cut(s)	1435
SmiMI	CAYNNNNRTG	3 cut(s)	485, 837, 1005
SmlI	CTYRAG	3 cut(s)	1091, 1130, 1435
SmoI	CTYRAG	3 cut(s)	1091, 1130, 1435
SseBI	AGGCCT	1 cut(s)	1026
SsiI	CCGC	6 cut(s)	33, 69, 120, 145, 734, 1367
SspDI	GGCGCC	2 cut(s)	107, 257
SspMI	CTAG	2 cut(s)	941, 1199
SstI	GAGCTC	2 cut(s)	672, 1442
StuI	AGGCCT	1 cut(s)	1026
StyD4I	CCNGG	2 cut(s)	302, 1142
TaaI	ACNGT	7 cut(s)	94, 226, 322, 329, 511, 679, 895
TaiI	ACGT	1 cut(s)	234
TaqI	TCGA	8 cut(s)	189, 249, 263, 561, 810, 1174, 1234, 1436
TatI	WGTACW	1 cut(s)	1311
TauI	GCSGC	2 cut(s)	123, 1370
TfiI	GAWTC	6 cut(s)	265, 341, 495, 638, 690, 851
Tru1I	TTAA	4 cut(s)	44, 542, 582, 885
Tru9I	TTAA	4 cut(s)	44, 542, 582, 885
TscAI	CASTG	5 cut(s)	229, 682, 1065, 1219, 1456
TseFI	GTSAC	1 cut(s)	673
TseI	GCWGC	5 cut(s)	307, 448, 451, 1247, 1337
Tsp45I	GTSAC	1 cut(s)	673
TspDTI	ATGAA	4 cut(s)	367, 827, 855, 1454
TspGWI	ACGGA	4 cut(s)	118, 321, 402, 1238
TspRI	CASTG	5 cut(s)	229, 682, 1065, 1219, 1456
Tth111I	GACNNNGTC	1 cut(s)	92
XapI	RAATTY	4 cut(s)	357, 442, 959, 1054
XbaI	TCTAGA	2 cut(s)	940, 1198
XceI	RCATGY	3 cut(s)	915, 1010, 1142
XhoI	CTCGAG	1 cut(s)	1435
XmnI	GAANNNNTTC	1 cut(s)	518
XspI	CTAG	2 cut(s)	941, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.