Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003832.1

Orthogroup ID

OG0015050

Physical Location & Seq

Genomic Coordinates Reverse (-)

43794 .. 54021

Gene Structure 10228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003832.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

atgtcgtcgtcgtcgtcttcttcggcaattcccgccctcaccttagtctctctctggctcctcctccccgtactttcccaagctgatgacacagtctgcatcgtcggcgccggcatcggcggcgcttccgtggcccacttcctccgcgaatactctccctccactctcaacctcacgatccgaatgttcgagcgaaacggcgtcgtcgggggacgcatggccactgtcaacgtctccggcgagttcttcgaggccggcgcctcgattctccaccccaagaacttccacgccgtcaactacaccaggctgctgaacctcacagtcaacagtccgtcggatgattccgagggttttggaatttgggatggggagaagttcatcttcaagactctgagcgtgaagtccaagcttccgtttgtgaacaggattgtttcgctggcgaattcgctgctgctgttcgtccggtacggctactcgctcgtcagaatggatagattcgtagagactactgtgaatagtttcttgaagtattatgagagcttaaagacgaggccggttttcgagtcggtggatgagatgcttaaatgggctggtttgcataatctcacggcgaggactttggctgaggagctggctgattctggcttgtgtccctttttgatacaagagcttgtcactgtcatcacaagaatcaattatggccaaaatgtcagtatgagtggacttggaggtgcggtatcattggcaggatctggtggaggattatggtctatcaaaggagggaactggcagatggcttctggattgatcaatcgttcagatgttgcattgcatcttcatgaagagatagaatctatttcttcaattggggactactacgaacttaactctaccatggggaatagttatacatgtgatgttgctgtagttgctacacctctagatgagttgaatgttgaatttactccttcagtttcaattcctaaaagagagttgcaacatacacatgcaactttggttagaggccttctaaatcctgtatattttggcgtgaattcagtgtcagaactcccaaaactggttgccacgcttgaggatcctgatcttccattcacaagcatctctgttctcaagcaacatgccgggaatgatatcacttacaagatattttctcgacaaccaatggcggaggcgcttctagatagtatcttcagtgcgaggacggagacaattcgaataaattgggctgcataccctcattatactgctcctgaagtatttgcaccctttatcttggatggccagcacttgtactatgtgaatgcttttgagaatgcagcaagcacaatggagacaagcgctgttgcggctgagaatgtagcaagactcatcttgtcaagatattttagtggtgtgcctgtgagtttggatatctcgagctctgacaggattacgaccagagataaagagagattgacccagattgcgattgattcagaaatggggaggcctgctttgctcgcatcggatttggtaatctcattcatgtgggtcttgtcaggagttttaatcaagaaatttattcacaatgtcttggggttggctcacgaacccagtggtgacatcctctacttcgccctctcaatcatcaacatgtttttctttgctttcttggctaagattaccaagggtggcacctacaatcctctcaccgttttctctgacgcaatcaccggcgatttcagccgattccttttcactgttgctgccagaatccctgctcaggttattggctctgttgctggggtcaagttcataatggagatctttcctggaataggtctcgggccacgtttgactgttgacatccatcgaggggcccttacagaaggattgctgacatttgcaatcgttactatctcacttggtctttacagaaaaatcccggggagctttttcatgaagacatggatctcaagtgtttccaagttaactcttcatattcttggctctgatctgactggtggttgcatgaacccagcttctgtgatgggatgggcttatgctcgtggagaccatataaccaaggaacatattcttgtgtattggcttgccccaatagaggcaactctactggcagtatggacatttagctcctctggtctggtgcaacattgcatcaatctcattcccggcgatcctccatttcaagcgtttggaaaaccggagagtgaccgcagcagctttatgagctaccttagaggccagccgagatcttattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000098 GO:0001101 GO:0001735 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006082 GO:0006508 GO:0006520 GO:0006575 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009063 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016054 GO:0016491 GO:0016667 GO:0016670 GO:0019538 GO:0019637 GO:0019752 GO:0019941 GO:0023052 GO:0030163 GO:0030327 GO:0030328 GO:0030329 GO:0031090 GO:0032870 GO:0033993 GO:0042219 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044273 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045338 GO:0046395 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0055114 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00900 ko01130 map00900 map01130

Pfam Domains

Protein Families

NAD_binding_8 Prenylcys_lyase

Protein Analysis

760

Amino Acids

83.1

Weight (kDa)

6.08

Isoelectric Point (pI)

34.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63910
fragaria_vesca	FvH4_1g24860 FvH4_1g24860
malus_domestica	MD15G1135000.v1.1
prunus_persica	Prupe.4G274700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0122521
rosa_laevigata	RLG00000018681
rosa_multiflora	Rmu_sc0003832.1_g000006 Rmu_sc0006704.1_g000006
rosa_roxburghii	Rroxscaffold_2G00121550
rosa_rugosa	Rorug02G0239200
rosa_samantha	Rh2AG297900 Rh2BG306600 Rh2CG284700 Rh2DG321500
rosa_wichuraiana	Rw2G023680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	107, 257, 1694
AccII	CGCG	1 cut(s)	147
AciI	CCGC	7 cut(s)	33, 120, 145, 734, 1187, 1367, 2236
AclWI	GGATC	6 cut(s)	172, 757, 1091, 1104, 1979, 2192
AcoI	YGGCCR	3 cut(s)	219, 700, 1300
AcsI	RAATTY	5 cut(s)	357, 442, 959, 1054, 1577
AcuI	CTGAAG	3 cut(s)	954, 1195, 1293
AcyI	GRCGYC	3 cut(s)	108, 201, 258
AfaI	GTAC	3 cut(s)	72, 467, 1313
AfeI	AGCGCT	1 cut(s)	1360
AfiI	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
AflIII	ACRYGT	2 cut(s)	911, 1653
AgsI	TTSAA	7 cut(s)	385, 526, 864, 952, 959, 978, 2210
AjnI	CCWGG	2 cut(s)	302, 1831
Alw21I	GWGCWC	1 cut(s)	1442
Alw26I	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
AlwI	GGATC	6 cut(s)	172, 757, 1091, 1104, 1979, 2192
AlwNI	CAGNNNCTG	2 cut(s)	752, 2045
Ama87I	CYCGRG	3 cut(s)	1435, 1844, 1945
Aor51HI	AGCGCT	1 cut(s)	1360
ApaI	GGGCCC	1 cut(s)	1882
ApeKI	GCWGC	8 cut(s)	307, 448, 451, 1247, 1337, 1766, 2238, 2241
ApoI	RAATTY	5 cut(s)	357, 442, 959, 1054, 1577
Asp700I	GAANNNNTTC	2 cut(s)	518, 2094
AspLEI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
AspS9I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
AsuC2I	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
AsuHPI	GGTGA	4 cut(s)	31, 1631, 1702, 1723
AsuII	TTCGAA	1 cut(s)	1234
AvaI	CYCGRG	3 cut(s)	1435, 1844, 1945
BaeGI	GKGCMC	1 cut(s)	1882
BalI	TGGCCA	3 cut(s)	221, 702, 1302
BamHI	GGATCC	1 cut(s)	1096
BanI	GGYRCC	3 cut(s)	107, 257, 1694
BanII	GRGCYC	2 cut(s)	1442, 1882
BauI	CACGAG	1 cut(s)	2067
BbsI	GAAGAC	2 cut(s)	9, 1970
Bbv12I	GWGCWC	1 cut(s)	1442
BbvCI	CCTCAGC	1 cut(s)	624
BbvI	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
BccI	CCATC	6 cut(s)	359, 787, 1292, 1878, 2044, 2049
BceAI	ACGGC	4 cut(s)	214, 275, 484, 624
BcgI	CGANNNNNNTGC	2 cut(s)	430, 464
BciT130I	CCWGG	2 cut(s)	304, 1833
BclI	TGATCA	1 cut(s)	807
BcnI	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
BcoDI	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
BfaI	CTAG	2 cut(s)	941, 1199
BfmI	CTRYAG	1 cut(s)	924
BfoI	RGCGCY	5 cut(s)	111, 126, 261, 1196, 1362
BglII	AGATCT	2 cut(s)	1824, 2273
Bme1390I	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
BmeT110I	CYCGRG	3 cut(s)	1435, 1844, 1945
BmgT120I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
BmiI	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
BmrFI	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
BmrI	ACTGGG	1 cut(s)	1608
BmsI	GCATC	7 cut(s)	108, 123, 567, 841, 1128, 1532, 2187
BmuI	ACTGGG	1 cut(s)	1608
BpiI	GAAGAC	2 cut(s)	9, 1970
Bpu10I	CCTNAGC	2 cut(s)	624, 1782
Bpu14I	TTCGAA	1 cut(s)	1234
BpuEI	CTTGAG	3 cut(s)	1112, 1115, 1960
BpuMI	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
BsaBI	GATNNNNATC	1 cut(s)	1101
BsaHI	GRCGYC	3 cut(s)	108, 201, 258
BsaI	GGTCTC	2 cut(s)	1847, 2067
BsaJI	CCNNGG	7 cut(s)	129, 345, 894, 1686, 1945, 1946, 2085
BsaWI	WCCGGW	2 cut(s)	462, 2224
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 720, 750
Bsc4I	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
Bse118I	RCCGGY	4 cut(s)	110, 254, 553, 1733
Bse1I	ACTGG	5 cut(s)	791, 1083, 1614, 2026, 2139
Bse3DI	GCAATG	2 cut(s)	827, 2173
Bse8I	GATNNNNATC	1 cut(s)	1101
BseBI	CCWGG	2 cut(s)	304, 1833
BseDI	CCNNGG	7 cut(s)	129, 345, 894, 1686, 1945, 1946, 2085
BseGI	GGATG	7 cut(s)	343, 370, 577, 1303, 1623, 1866, 2060
BseJI	GATNNNNATC	1 cut(s)	1101
BseLI	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
BseMI	GCAATG	2 cut(s)	827, 2173
BseMII	CTCAG	4 cut(s)	383, 615, 1362, 1796
BseNI	ACTGG	5 cut(s)	791, 1083, 1614, 2026, 2139
BseRI	GAGGAG	4 cut(s)	50, 53, 641, 2146
BseSI	GKGCMC	1 cut(s)	1882
BseXI	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
BseYI	CCCAGC	2 cut(s)	1802, 2038
Bsh1236I	CGCG	1 cut(s)	147
BshNI	GGYRCC	3 cut(s)	107, 257, 1694
BsiHKAI	GWGCWC	1 cut(s)	1442
BsiHKCI	CYCGRG	3 cut(s)	1435, 1844, 1945
BslFI	GGGAC	3 cut(s)	225, 636, 884
BslI	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
BsmAI	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
BsmBI	CGTCTC	1 cut(s)	238
BsmFI	GGGAC	3 cut(s)	225, 636, 884
BsmI	GAATGC	2 cut(s)	1327, 1339
Bso31I	GGTCTC	2 cut(s)	1847, 2067
BsoBI	CYCGRG	3 cut(s)	1435, 1844, 1945
Bsp119I	TTCGAA	1 cut(s)	1234
Bsp120I	GGGCCC	1 cut(s)	1878
Bsp1286I	GDGCHC	2 cut(s)	1442, 1882
Bsp19I	CCATGG	1 cut(s)	894
BspACI	CCGC	7 cut(s)	33, 120, 145, 734, 1187, 1367, 2236
BspCNI	CTCAG	4 cut(s)	384, 616, 1363, 1795
BspFNI	CGCG	1 cut(s)	147
BspHI	TCATGA	2 cut(s)	838, 1959
BspLI	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
BspPI	GGATC	6 cut(s)	172, 757, 1091, 1104, 1979, 2192
BspT104I	TTCGAA	1 cut(s)	1234
BspT107I	GGYRCC	3 cut(s)	107, 257, 1694
BspTNI	GGTCTC	2 cut(s)	1847, 2067
BsrDI	GCAATG	2 cut(s)	827, 2173
BsrFI	RCCGGY	4 cut(s)	110, 254, 553, 1733
BsrI	ACTGG	5 cut(s)	791, 1083, 1614, 2026, 2139
BssAI	RCCGGY	4 cut(s)	110, 254, 553, 1733
BssECI	CCNNGG	7 cut(s)	129, 345, 894, 1686, 1945, 1946, 2085
BssNI	GRCGYC	3 cut(s)	108, 201, 258
BssSI	CACGAG	1 cut(s)	2067
BssT1I	CCWWGG	3 cut(s)	894, 1686, 2085
Bst2BI	CACGAG	1 cut(s)	2067
Bst2UI	CCWGG	2 cut(s)	304, 1833
Bst4CI	ACNGT	9 cut(s)	94, 226, 322, 329, 511, 679, 1714, 1762, 1861
Bst6I	CTCTTC	2 cut(s)	837, 2001
BstACI	GRCGYC	3 cut(s)	108, 201, 258
BstBI	TTCGAA	1 cut(s)	1234
BstDEI	CTNAG	7 cut(s)	43, 392, 624, 1371, 1677, 1782, 2258
BstDSI	CCRYGG	2 cut(s)	129, 894
BstENI	CCTNNNNNAGG	1 cut(s)	1836
BstF5I	GGATG	7 cut(s)	343, 370, 577, 1303, 1623, 1866, 2060
BstFNI	CGCG	1 cut(s)	147
BstH2I	RGCGCY	5 cut(s)	111, 126, 261, 1196, 1362
BstHHI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
BstMAI	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
BstNI	CCWGG	2 cut(s)	304, 1833
BstNSI	RCATGY	4 cut(s)	915, 1010, 1142, 1657
BstSCI	CCNGG	6 cut(s)	302, 1142, 1831, 1944, 1945, 2191
BstSFI	CTRYAG	1 cut(s)	924
BstSLI	GKGCMC	1 cut(s)	1882
BstUI	CGCG	1 cut(s)	147
BstV1I	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
BstV2I	GAAGAC	2 cut(s)	9, 1970
BstX2I	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
BstYI	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
BtgI	CCRYGG	2 cut(s)	129, 894
BtsCI	GGATG	7 cut(s)	343, 370, 577, 1303, 1623, 1866, 2060
BtsIMutI	CAGTG	6 cut(s)	222, 675, 1065, 1219, 1621, 1758
CaiI	CAGNNNCTG	2 cut(s)	752, 2045
CciI	TCATGA	2 cut(s)	838, 1959
CfoI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
Cfr10I	RCCGGY	4 cut(s)	110, 254, 553, 1733
Cfr13I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
Cfr9I	CCCGGG	1 cut(s)	1945
CseI	GACGC	3 cut(s)	190, 222, 1733
Csp6I	GTAC	3 cut(s)	71, 466, 1312
CviQI	GTAC	3 cut(s)	71, 466, 1312
DdeI	CTNAG	7 cut(s)	43, 392, 624, 1371, 1677, 1782, 2258
DinI	GGCGCC	2 cut(s)	109, 259
EaeI	YGGCCR	3 cut(s)	219, 700, 1300
Eam1104I	CTCTTC	2 cut(s)	837, 2001
EarI	CTCTTC	2 cut(s)	837, 2001
EciI	GGCGGA	1 cut(s)	1202
Ecl136II	GAGCTC	1 cut(s)	1440
Eco130I	CCWWGG	3 cut(s)	894, 1686, 2085
Eco147I	AGGCCT	2 cut(s)	1026, 1510
Eco24I	GRGCYC	2 cut(s)	1442, 1882
Eco31I	GGTCTC	2 cut(s)	1847, 2067
Eco32I	GATATC	2 cut(s)	1153, 1432
Eco47III	AGCGCT	1 cut(s)	1360
Eco53kI	GAGCTC	1 cut(s)	1440
Eco57I	CTGAAG	3 cut(s)	954, 1195, 1293
Eco88I	CYCGRG	3 cut(s)	1435, 1844, 1945
EcoICRI	GAGCTC	1 cut(s)	1440
EcoNI	CCTNNNNNAGG	1 cut(s)	1836
EcoO109I	RGGNCCY	2 cut(s)	1878, 1879
EcoRI	GAATTC	2 cut(s)	442, 1054
EcoRII	CCWGG	2 cut(s)	302, 1831
EcoRV	GATATC	2 cut(s)	1153, 1432
EcoT14I	CCWWGG	3 cut(s)	894, 1686, 2085
EcoT38I	GRGCYC	2 cut(s)	1442, 1882
EgeI	GGCGCC	2 cut(s)	109, 259
EheI	GGCGCC	2 cut(s)	109, 259
ErhI	CCWWGG	3 cut(s)	894, 1686, 2085
Esp3I	CGTCTC	1 cut(s)	238
FalI	AAGNNNNNCTT	2 cut(s)	365, 397
FaqI	GGGAC	3 cut(s)	225, 636, 884
FauI	CCCGC	1 cut(s)	40
FbaI	TGATCA	1 cut(s)	807
FokI	GGATG	7 cut(s)	350, 377, 584, 1310, 1610, 1853, 2067
FriOI	GRGCYC	2 cut(s)	1442, 1882
FspBI	CTAG	2 cut(s)	941, 1199
GlaI	GCGC	5 cut(s)	109, 124, 259, 1194, 1360
GsaI	CCCAGC	2 cut(s)	1806, 2042
HaeII	RGCGCY	5 cut(s)	111, 126, 261, 1196, 1362
HgaI	GACGC	3 cut(s)	190, 222, 1733
HhaI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
Hin1I	GRCGYC	3 cut(s)	108, 201, 258
Hin6I	GCGC	5 cut(s)	108, 123, 258, 1193, 1359
HinP1I	GCGC	5 cut(s)	108, 123, 258, 1193, 1359
HincII	GTYRAC	5 cut(s)	229, 295, 325, 1864, 1992
HindII	GTYRAC	5 cut(s)	229, 295, 325, 1864, 1992
HindIII	AAGCTT	1 cut(s)	407
HpaI	GTTAAC	1 cut(s)	1992
HphI	GGTGA	4 cut(s)	31, 1631, 1702, 1723
Hpy166II	GTNNAC	7 cut(s)	229, 295, 325, 421, 722, 1864, 1992
Hpy8I	GTNNAC	7 cut(s)	229, 295, 325, 421, 722, 1864, 1992
Hpy99I	CGWCG	7 cut(s)	10, 13, 16, 107, 206, 209, 337
HpyAV	CCTTC	3 cut(s)	978, 1037, 1883
HpyCH4III	ACNGT	9 cut(s)	94, 226, 322, 329, 511, 679, 1714, 1762, 1861
HpyCH4IV	ACGT	2 cut(s)	231, 1852
HpyF3I	CTNAG	7 cut(s)	43, 392, 624, 1371, 1677, 1782, 2258
HpySE526I	ACGT	2 cut(s)	231, 1852
Hsp92I	GRCGYC	3 cut(s)	108, 201, 258
HspAI	GCGC	5 cut(s)	108, 123, 258, 1193, 1359
KasI	GGCGCC	2 cut(s)	107, 257
KroI	GCCGGC	2 cut(s)	110, 254
KroNI	GCCGGC	2 cut(s)	112, 256
Ksp22I	TGATCA	1 cut(s)	807
KspAI	GTTAAC	1 cut(s)	1992
LmnI	GCTCC	5 cut(s)	63, 628, 1273, 1950, 2159
Lsp1109I	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
LweI	GCATC	7 cut(s)	108, 123, 567, 841, 1128, 1532, 2187
MaeI	CTAG	2 cut(s)	941, 1199
MaeII	ACGT	2 cut(s)	231, 1852
MaeIII	GTNAC	4 cut(s)	673, 1619, 1912, 2231
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
MhlI	GDGCHC	2 cut(s)	1442, 1882
MlsI	TGGCCA	3 cut(s)	221, 702, 1302
MluNI	TGGCCA	3 cut(s)	221, 702, 1302
Mly113I	GGCGCC	2 cut(s)	108, 258
MlyI	GAGTC	3 cut(s)	382, 572, 1380
MmeI	TCCRAC	1 cut(s)	315
Mox20I	TGGCCA	3 cut(s)	221, 702, 1302
MroNI	GCCGGC	2 cut(s)	110, 254
MroXI	GAANNNNTTC	2 cut(s)	518, 2094
MscI	TGGCCA	3 cut(s)	221, 702, 1302
MseI	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
MslI	CAYNNNNRTG	4 cut(s)	837, 1005, 1546, 1652
Msp20I	TGGCCA	3 cut(s)	221, 702, 1302
MspR9I	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
MunI	CAATTG	1 cut(s)	864
Mva1269I	GAATGC	2 cut(s)	1327, 1339
MvaI	CCWGG	2 cut(s)	304, 1833
MvnI	CGCG	1 cut(s)	147
NaeI	GCCGGC	2 cut(s)	112, 256
NarI	GGCGCC	2 cut(s)	108, 258
NciI	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
NcoI	CCATGG	1 cut(s)	894
NgoMIV	GCCGGC	2 cut(s)	110, 254
NlaIV	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
NmuCI	GTSAC	3 cut(s)	673, 1619, 2231
NspI	RCATGY	4 cut(s)	915, 1010, 1142, 1657
NspV	TTCGAA	1 cut(s)	1234
PaeR7I	CTCGAG	1 cut(s)	1435
PagI	TCATGA	2 cut(s)	838, 1959
PceI	AGGCCT	2 cut(s)	1026, 1510
PciI	ACATGT	2 cut(s)	911, 1653
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 237
PctI	GAATGC	2 cut(s)	1327, 1339
PdiI	GCCGGC	2 cut(s)	112, 256
PdmI	GAANNNNTTC	2 cut(s)	518, 2094
PfeI	GAWTC	9 cut(s)	265, 341, 495, 638, 690, 851, 1493, 1749, 1773
PflFI	GACNNNGTC	1 cut(s)	92
PfoI	TCCNGGA	1 cut(s)	1831
PleI	GAGTC	3 cut(s)	382, 571, 1380
PluTI	GGCGCC	2 cut(s)	111, 261
PpsI	GAGTC	3 cut(s)	382, 571, 1380
PscI	ACATGT	2 cut(s)	911, 1653
Psp124BI	GAGCTC	1 cut(s)	1442
Psp6I	CCWGG	2 cut(s)	302, 1831
PspFI	CCCAGC	2 cut(s)	1802, 2038
PspGI	CCWGG	2 cut(s)	302, 1831
PspN4I	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
PspOMI	GGGCCC	1 cut(s)	1878
PspPI	GGNCC	4 cut(s)	133, 1847, 1878, 1879
PstNI	CAGNNNCTG	2 cut(s)	752, 2045
PsuI	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
PsyI	GACNNNGTC	1 cut(s)	92
RsaI	GTAC	3 cut(s)	72, 467, 1313
RsaNI	GTAC	3 cut(s)	71, 466, 1312
RseI	CAYNNNNRTG	4 cut(s)	837, 1005, 1546, 1652
SacI	GAGCTC	1 cut(s)	1442
SaqAI	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
Sau96I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
SchI	GAGTC	3 cut(s)	382, 572, 1380
ScrFI	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
SduI	GDGCHC	2 cut(s)	1442, 1882
SfaNI	GCATC	7 cut(s)	108, 123, 567, 841, 1128, 1532, 2187
SfcI	CTRYAG	1 cut(s)	924
SfoI	GGCGCC	2 cut(s)	109, 259
Sfr274I	CTCGAG	1 cut(s)	1435
SfuI	TTCGAA	1 cut(s)	1234
SgrAI	CRCCGGYG	1 cut(s)	1733
SlaI	CTCGAG	1 cut(s)	1435
SmaI	CCCGGG	1 cut(s)	1947
SmiMI	CAYNNNNRTG	4 cut(s)	837, 1005, 1546, 1652
SmlI	CTYRAG	4 cut(s)	1091, 1130, 1435, 1975
SmoI	CTYRAG	4 cut(s)	1091, 1130, 1435, 1975
SseBI	AGGCCT	2 cut(s)	1026, 1510
SsiI	CCGC	7 cut(s)	33, 120, 145, 734, 1187, 1367, 2236
SspDI	GGCGCC	2 cut(s)	107, 257
SspMI	CTAG	2 cut(s)	941, 1199
SstI	GAGCTC	1 cut(s)	1442
StuI	AGGCCT	2 cut(s)	1026, 1510
StyD4I	CCNGG	6 cut(s)	302, 1142, 1831, 1944, 1945, 2191
StyI	CCWWGG	3 cut(s)	894, 1686, 2085
TaaI	ACNGT	9 cut(s)	94, 226, 322, 329, 511, 679, 1714, 1762, 1861
TaiI	ACGT	2 cut(s)	234, 1855
TaqI	TCGA	8 cut(s)	189, 249, 263, 561, 1174, 1234, 1436, 1873
TatI	WGTACW	1 cut(s)	1311
TauI	GCSGC	2 cut(s)	123, 1370
TfiI	GAWTC	9 cut(s)	265, 341, 495, 638, 690, 851, 1493, 1749, 1773
Tru1I	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
Tru9I	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
TscAI	CASTG	6 cut(s)	229, 682, 1065, 1219, 1621, 1765
TseFI	GTSAC	3 cut(s)	673, 1619, 2231
TseI	GCWGC	8 cut(s)	307, 448, 451, 1247, 1337, 1766, 2238, 2241
Tsp45I	GTSAC	3 cut(s)	673, 1619, 2231
TspDTI	ATGAA	9 cut(s)	367, 827, 855, 1534, 1804, 1948, 1976, 1988, 2048
TspGWI	ACGGA	4 cut(s)	118, 321, 402, 1238
TspMI	CCCGGG	1 cut(s)	1945
TspRI	CASTG	6 cut(s)	229, 682, 1065, 1219, 1621, 1765
Tth111I	GACNNNGTC	1 cut(s)	92
XagI	CCTNNNNNAGG	1 cut(s)	1836
XapI	RAATTY	5 cut(s)	357, 442, 959, 1054, 1577
XbaI	TCTAGA	2 cut(s)	940, 1198
XceI	RCATGY	4 cut(s)	915, 1010, 1142, 1657
XhoI	CTCGAG	1 cut(s)	1435
XmaI	CCCGGG	1 cut(s)	1945
XmnI	GAANNNNTTC	2 cut(s)	518, 2094
XspI	CTAG	2 cut(s)	941, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.