Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007779

Physical Location & Seq

Genomic Coordinates Forward (+)

10880182 .. 10886690

Gene Structure 6509 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1146400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGCTTCCACAGCGATCTTCAGGAGGAAGAGAATCGTCACCGACTATGTAACGGCGTCGTCCCGCGCCAGCCCTGGATTCCAGTGGCTCGGGCATTCCCATGGCGATCAGAATCTGGAGTCCAGGGGCTTCAGCAGTATCGTCACGCTTAAGAGCAGCAGCAACAACGACGGCGATGATAAAGTTTCCGTGGCAAAAGACGAATTCCGGCGATTGGGGTATGTCTATATCTCGCCAATGGGGATACATCAGCGGTGGATGTCGCAGGCGATTCGAAATGCGTCCACTGCTGCAGCGGCGGCGCCCGCCAAGCCTCCTGAGGCTGGGAGTCCCAGTGATGACGAGGACAACCAGCGTTTGGCTGCCAAAAAAAGAAAGGAGGCGTCTCCGGAGGACTGCGATCAAGCTGTCCAGGGGTTGAGCACTGCGAAAGCCGCCAAGGCCAAGAAATTGCAAGAGTCTCTCAAGGAAAAGGCTGTCAAACCCATGTTGCAGAAAGTTTGGGCCACCATCCTGGGAATTGGCCCTGCTTTGAGAGCTGTGGCTTCCATGAGCAGGGAAGACTGGGCCAAGAAACTTGTTCACTGGAAAAAAGAATTTATATCCACATTGCAGCATTATTGGTTGGGTATTAAGCTTCTGGGTGCTGATGTAAGGATTTGTTCGAGATTGCTGCTAAAGCTTGCTGGCGGCAAGACTCTCTCTAGAAGGGAGAGACAACAGCTCACCCGCACAACAGCTGACATCTTTAGGCTAGTTCCGTTGTCGGTTTTCATCATCGTTCCTTTCATGGAATTTTTGCTGCCAGTTTTCCTCAAATTGTTCCCCAACATGCTGCCATCAACTTTTCAAGACAAATTGAAGGAAGAGGAAGCATTGAAAAGGAGGCTAAAGGCAAGAATCGAATATGCTAAGTTCCTCCAAGACACGGCCAAAGAAATGGCAAAGGAAGTTCAAAACTCAAGGAGTGGAGAAATTAAGCAAACAGCAGAAGATCTAGATGAATTTTTAAACAAAGTTAGAACGGGTGGACGTGTTTCTAACGAGGAGATTTTGGGGTTTGCCAAGTTGTTTAATGATGAACTTACCCTTGATAACATCAGCAGGCCTCGGTTAGTCAGTATGTGCAAATATATGAACATTAGCCCTTATGGAACAGATGCATATTTGCGATATATGCTCCGGAAAAGACTCCAGCGGATTAAGGCTGATGATAAGTTAATTCAAGAAGAAGGTGTGGAATCCCTTACAGAAGATGAGCTGCGGGAGGAATGCAGGGAGCGCGGAATGCTTGGTTTGCGTTCTGTGGAAGATATGCGCCAGCAGCTTCATGATTGGTTGGATTTGTCTCTCAATCACTCCATGCCATCTTCGCTTTTGATCCTTTCCAGAGCCTTCATTGTGTCTGGAAGGTTGATGCCAGCTGACGCCGTTCGAGCTACACTGTCTTCTTTGCCAGATGAAGTGGTGGATACTGTTGGTGTTACATCGTTGCCCTCGGAAGACTCTGTATCTGAAAGGAGGAGGAAATTGGAGTTCCTTGAGATGCAGGAAGAAAAGATCAAGGAGGAGGAACAGAGAGAGGAAGAAGAGCTAGCCAGAATGAAAGAATCTAAAGCCAAAGAAGAGGATAAGGCATTGAAGGAGATGACTATTCCAACAGCCAAAGAAGCACAAGAACAAGCCAGGGCAAGGACACTAGAAAAGCAAGAGAAGCTCTGTGAAATAAGTCGTGCATTGGCTGTTTTGGCTTCCGCATCTTCTGTGAGTAGAGAACGTGAAGAGTTCCTGAGGCTTGTCAATAAGGAGATTGAACTTTACAATAGCGTGGTGGATAAAGAGGGTACAGATGGTGAAAAGGATGCCTTAAAGGCATACAAAGCTGCTCGAGATGAAAGTGACAGTACTGCTGAGGCGGAAGGTGATAGTGGGATTTCATCAGCGCTCATAGACAAGGTTGATTCGATGCTTCACAATCTTGAAAAGGAAATTGATGATGTAGATGCTCAAATTGGTGATCGCTGGCGATTACTTGACAGGGATTTTGATGGGAAAGTAACTCCTGAGGAGGTTGCAGCTGCTGCGAACTACTTGAAGAATACTTTAGGCAAGGAGGGTGTCCAAGAACTCATAGGCAACCTTTCAAAAGATAAAGATGGGAAAATTCTTGTGGAAGACATTGTGAGATTGGGAGGTCGGTCTGAAGATGCAAACTCAGCAGAAGACGAGAGAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 ko04139 ko04212 ko05152 map03018 map04139 map04212 map05152

Pfam Domains

Protein Families

LETM1

Protein Analysis

746

Amino Acids

83.92

Weight (kDa)

5.87

Isoelectric Point (pI)

54.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LETM1_RBD	PF07766	234 - 466	1.3e-86	LETM1-like, RBD
EF-hand_7	PF13499	669 - 728	6.3e-07	EF-hand domain pair

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65540 AT1G65540 AT1G65540 AT3G59820 AT3G59820 AT3G59820 AT3G59820
fragaria_vesca	FvH4_1g00380 FvH4_1g00380
malus_domestica	MD02G1003200.v1.1 MD15G1146400.v1.1
prunus_persica	Prupe.7G268000_v2.0.a1
pyrus_communis	pycom02g00170 pycom15g13140
rosa_chinensis	RchiOBHm_Chr2g0084811
rosa_laevigata	RLG00000015642
rosa_multiflora	Rmu_ssc0000436.1_g000003
rosa_roxburghii	Rroxscaffold_2G00155800
rosa_rugosa	Rorug01G0456500
rosa_samantha	Rh2AG003600 Rh2BG005200 Rh2CG005600 Rh2DG005000
rosa_wichuraiana	Rw2G000410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	301
AccB7I	CCANNNNNTGG	1 cut(s)	358
AccII	CGCG	2 cut(s)	66, 1284
AccIII	TCCGGA	2 cut(s)	388, 1182
AclWI	GGATC	1 cut(s)	1375
AcoI	YGGCCR	1 cut(s)	930
AcsI	RAATTY	5 cut(s)	203, 596, 794, 1004, 2163
AcuI	CTGAAG	3 cut(s)	4, 115, 2223
AcyI	GRCGYC	4 cut(s)	56, 302, 383, 1428
AfaI	GTAC	2 cut(s)	1846, 1906
AfeI	AGCGCT	1 cut(s)	1944
AfiI	CCNNNNNNNGG	6 cut(s)	214, 323, 358, 555, 928, 1692
AflII	CTTAAG	1 cut(s)	149
AflIII	ACRYGT	1 cut(s)	1033
AjiI	CACGTC	1 cut(s)	1034
AjnI	CCWGG	5 cut(s)	73, 122, 411, 513, 1685
Alw21I	GWGCWC	1 cut(s)	425
Alw26I	GTCTC	4 cut(s)	390, 465, 709, 1353
AlwI	GGATC	1 cut(s)	1375
AlwNI	CAGNNNCTG	2 cut(s)	115, 2081
Ama87I	CYCGRG	2 cut(s)	89, 1887
Aor13HI	TCCGGA	2 cut(s)	388, 1182
Aor51HI	AGCGCT	1 cut(s)	1944
AoxI	GGCC	6 cut(s)	441, 504, 523, 567, 930, 1106
ApoI	RAATTY	5 cut(s)	203, 596, 794, 1004, 2163
ArsI	GACNNNNNNTTYG	2 cut(s)	2027, 2059
AspLEI	GCGC	5 cut(s)	68, 304, 1284, 1320, 1945
AspS9I	GGNCC	3 cut(s)	504, 524, 567
AsuHPI	GGTGA	5 cut(s)	31, 718, 1865, 1934, 2027
AsuII	TTCGAA	1 cut(s)	274
AsuNHI	GCTAGC	1 cut(s)	1594
AvaI	CYCGRG	2 cut(s)	89, 1887
AxyI	CCTNAGG	3 cut(s)	318, 1790, 2064
BanI	GGYRCC	1 cut(s)	301
BbsI	GAAGAC	5 cut(s)	567, 1440, 1509, 2181, 2229
Bbv12I	GWGCWC	1 cut(s)	425
BbvCI	CCTCAGC	1 cut(s)	1911
BccI	CCATC	6 cut(s)	518, 847, 1375, 1844, 2042, 2150
BceAI	ACGGC	4 cut(s)	69, 187, 945, 1415
BcgI	CGANNNNNNTGC	4 cut(s)	254, 288, 655, 689
BciT130I	CCWGG	5 cut(s)	75, 124, 413, 515, 1687
BciVI	GTATCC	2 cut(s)	237, 1465
BcoDI	GTCTC	4 cut(s)	390, 465, 709, 1353
BfaI	CTAG	5 cut(s)	705, 755, 998, 1595, 1700
BfmI	CTRYAG	1 cut(s)	291
BfoI	RGCGCY	2 cut(s)	305, 1946
BfrI	CTTAAG	1 cut(s)	149
BfuI	GTATCC	2 cut(s)	237, 1465
BglI	GCCNNNNNGGC	2 cut(s)	440, 1871
BglII	AGATCT	1 cut(s)	994
BmcAI	AGTACT	1 cut(s)	1906
Bme1390I	CCNGG	5 cut(s)	75, 124, 413, 515, 1687
BmeT110I	CYCGRG	2 cut(s)	89, 1887
BmgBI	CACGTC	1 cut(s)	1034
BmgT120I	GGNCC	3 cut(s)	504, 524, 567
BmiI	GGNNCC	1 cut(s)	303
BmrFI	CCNGG	5 cut(s)	75, 124, 413, 515, 1687
BmrI	ACTGGG	2 cut(s)	327, 574
BmsI	GCATC	8 cut(s)	1150, 1407, 1536, 1766, 1852, 1956, 1993, 2197
BmtI	GCTAGC	1 cut(s)	1598
BmuI	ACTGGG	2 cut(s)	327, 574
BpiI	GAAGAC	5 cut(s)	567, 1440, 1509, 2181, 2229
BpmI	CTGGAG	2 cut(s)	137, 1178
Bpu10I	CCTNAGC	1 cut(s)	1911
Bpu14I	TTCGAA	1 cut(s)	274
BpuEI	CTTGAG	3 cut(s)	449, 946, 1562
BsaBI	GATNNNNATC	1 cut(s)	111
BsaHI	GRCGYC	4 cut(s)	56, 302, 383, 1428
BsaWI	WCCGGW	2 cut(s)	388, 1182
BsaXI	ACNNNNNCTCC	2 cut(s)	319, 349
Bsc4I	CCNNNNNNNGG	6 cut(s)	214, 323, 358, 555, 928, 1692
Bse1I	ACTGG	5 cut(s)	82, 333, 569, 590, 806
Bse21I	CCTNAGG	3 cut(s)	318, 1790, 2064
Bse3DI	GCAATG	1 cut(s)	608
Bse8I	GATNNNNATC	1 cut(s)	111
BseAI	TCCGGA	2 cut(s)	388, 1182
BseBI	CCWGG	5 cut(s)	75, 124, 413, 515, 1687
BseGI	GGATG	3 cut(s)	264, 510, 1867
BseJI	GATNNNNATC	1 cut(s)	111
BseLI	CCNNNNNNNGG	6 cut(s)	214, 323, 358, 555, 928, 1692
BseMI	GCAATG	1 cut(s)	608
BseMII	CTCAG	5 cut(s)	309, 1781, 1902, 2055, 2229
BseNI	ACTGG	5 cut(s)	82, 333, 569, 590, 806
BseRI	GAGGAG	4 cut(s)	1061, 1537, 1583, 2081
BseYI	CCCAGC	1 cut(s)	323
Bsh1236I	CGCG	2 cut(s)	66, 1284
BshFI	GGCC	6 cut(s)	443, 506, 525, 569, 932, 1108
BshNI	GGYRCC	1 cut(s)	301
BsiHKAI	GWGCWC	1 cut(s)	425
BsiHKCI	CYCGRG	2 cut(s)	89, 1887
BsiSI	CCGG	3 cut(s)	208, 389, 1183
BslFI	GGGAC	2 cut(s)	46, 315
BslI	CCNNNNNNNGG	6 cut(s)	214, 323, 358, 555, 928, 1692
BsmAI	GTCTC	4 cut(s)	390, 465, 709, 1353
BsmBI	CGTCTC	1 cut(s)	390
BsmFI	GGGAC	2 cut(s)	46, 315
BsmI	GAATGC	3 cut(s)	94, 1277, 1293
BsnI	GGCC	6 cut(s)	443, 506, 525, 569, 932, 1108
BsoBI	CYCGRG	2 cut(s)	89, 1887
Bsp119I	TTCGAA	1 cut(s)	274
Bsp1286I	GDGCHC	1 cut(s)	425
Bsp13I	TCCGGA	2 cut(s)	388, 1182
Bsp143I	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
Bsp19I	CCATGG	1 cut(s)	100
BspANI	GGCC	6 cut(s)	443, 506, 525, 569, 932, 1108
BspCNI	CTCAG	5 cut(s)	310, 1782, 1903, 2056, 2228
BspEI	TCCGGA	2 cut(s)	388, 1182
BspFNI	CGCG	2 cut(s)	66, 1284
BspHI	TCATGA	1 cut(s)	1330
BspLI	GGNNCC	1 cut(s)	303
BspMAI	CTGCAG	1 cut(s)	295
BspOI	GCTAGC	1 cut(s)	1598
BspPI	GGATC	1 cut(s)	1375
BspQI	GCTCTTC	1 cut(s)	1584
BspT104I	TTCGAA	1 cut(s)	274
BspT107I	GGYRCC	1 cut(s)	301
BspTI	CTTAAG	1 cut(s)	149
BsrDI	GCAATG	1 cut(s)	608
BsrI	ACTGG	5 cut(s)	82, 333, 569, 590, 806
BssMI	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
BssNI	GRCGYC	4 cut(s)	56, 302, 383, 1428
BssT1I	CCWWGG	2 cut(s)	100, 438
Bst2UI	CCWGG	5 cut(s)	75, 124, 413, 515, 1687
Bst4CI	ACNGT	3 cut(s)	1446, 1477, 1904
Bst6I	CTCTTC	5 cut(s)	23, 861, 1584, 1620, 1776
BstACI	GRCGYC	4 cut(s)	56, 302, 383, 1428
BstAFI	CTTAAG	1 cut(s)	149
BstAPI	GCANNNNNTGC	1 cut(s)	2081
BstBI	TTCGAA	1 cut(s)	274
BstDEI	CTNAG	6 cut(s)	318, 912, 1790, 1911, 2064, 2215
BstDSI	CCRYGG	2 cut(s)	100, 189
BstF5I	GGATG	3 cut(s)	264, 510, 1867
BstFNI	CGCG	2 cut(s)	66, 1284
BstH2I	RGCGCY	2 cut(s)	305, 1946
BstHHI	GCGC	5 cut(s)	68, 304, 1284, 1320, 1945
BstKTI	GATC	7 cut(s)	18, 109, 403, 997, 1383, 1563, 2020
BstMAI	GTCTC	4 cut(s)	390, 465, 709, 1353
BstMBI	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
BstNI	CCWGG	5 cut(s)	75, 124, 413, 515, 1687
BstNSI	RCATGY	1 cut(s)	835
BstSCI	CCNGG	5 cut(s)	73, 122, 411, 513, 1685
BstSFI	CTRYAG	1 cut(s)	291
BstUI	CGCG	2 cut(s)	66, 1284
BstV2I	GAAGAC	5 cut(s)	567, 1440, 1509, 2181, 2229
BstX2I	RGATCY	1 cut(s)	994
BstXI	CCANNNNNNTGG	2 cut(s)	514, 940
BstYI	RGATCY	1 cut(s)	994
Bsu36I	CCTNAGG	3 cut(s)	318, 1790, 2064
BsuI	GTATCC	2 cut(s)	237, 1465
BsuRI	GGCC	6 cut(s)	443, 506, 525, 569, 932, 1108
BtgI	CCRYGG	2 cut(s)	100, 189
BtgZI	GCGATG	1 cut(s)	189
BtrI	CACGTC	1 cut(s)	1034
BtsCI	GGATG	3 cut(s)	264, 510, 1867
BtsI	GCAGTG	2 cut(s)	285, 423
BtsIMutI	CAGTG	6 cut(s)	89, 285, 340, 423, 583, 1442
CaiI	CAGNNNCTG	2 cut(s)	115, 2081
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	5 cut(s)	68, 304, 1284, 1320, 1945
Cfr13I	GGNCC	3 cut(s)	504, 524, 567
CseI	GACGC	4 cut(s)	45, 270, 372, 1436
Csp6I	GTAC	2 cut(s)	1845, 1905
CviAII	CATG	7 cut(s)	101, 487, 550, 790, 832, 1331, 1363
CviQI	GTAC	2 cut(s)	1845, 1905
DdeI	CTNAG	6 cut(s)	318, 912, 1790, 1911, 2064, 2215
DinI	GGCGCC	1 cut(s)	303
DpnI	GATC	7 cut(s)	17, 108, 402, 996, 1382, 1562, 2019
DpnII	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
DraI	TTTAAA	1 cut(s)	1011
EaeI	YGGCCR	1 cut(s)	930
Eam1104I	CTCTTC	5 cut(s)	23, 861, 1584, 1620, 1776
EarI	CTCTTC	5 cut(s)	23, 861, 1584, 1620, 1776
EciI	GGCGGA	1 cut(s)	1931
Eco130I	CCWWGG	2 cut(s)	100, 438
Eco147I	AGGCCT	1 cut(s)	1108
Eco47III	AGCGCT	1 cut(s)	1944
Eco57I	CTGAAG	3 cut(s)	4, 115, 2223
Eco81I	CCTNAGG	3 cut(s)	318, 1790, 2064
Eco88I	CYCGRG	2 cut(s)	89, 1887
EcoRI	GAATTC	1 cut(s)	203
EcoRII	CCWGG	5 cut(s)	73, 122, 411, 513, 1685
EcoT14I	CCWWGG	2 cut(s)	100, 438
EcoT22I	ATGCAT	1 cut(s)	1165
EgeI	GGCGCC	1 cut(s)	303
EheI	GGCGCC	1 cut(s)	303
ErhI	CCWWGG	2 cut(s)	100, 438
Esp3I	CGTCTC	1 cut(s)	390
FaeI	CATG	7 cut(s)	104, 490, 553, 793, 835, 1334, 1366
FalI	AAGNNNNNCTT	2 cut(s)	1850, 1882
FaqI	GGGAC	2 cut(s)	46, 315
FatI	CATG	7 cut(s)	100, 486, 549, 789, 831, 1330, 1362
FauI	CCCGC	4 cut(s)	71, 313, 737, 1257
FokI	GGATG	3 cut(s)	271, 497, 1874
FspBI	CTAG	5 cut(s)	705, 755, 998, 1595, 1700
GlaI	GCGC	5 cut(s)	67, 303, 1283, 1319, 1944
GsaI	CCCAGC	1 cut(s)	327
GsuI	CTGGAG	2 cut(s)	137, 1178
HaeII	RGCGCY	2 cut(s)	305, 1946
HaeIII	GGCC	6 cut(s)	443, 506, 525, 569, 932, 1108
HapII	CCGG	3 cut(s)	208, 389, 1183
HgaI	GACGC	4 cut(s)	45, 270, 372, 1436
HhaI	GCGC	5 cut(s)	68, 304, 1284, 1320, 1945
Hin1I	GRCGYC	4 cut(s)	56, 302, 383, 1428
Hin1II	CATG	7 cut(s)	104, 490, 553, 793, 835, 1334, 1366
Hin6I	GCGC	5 cut(s)	66, 302, 1282, 1318, 1943
HinP1I	GCGC	5 cut(s)	66, 302, 1282, 1318, 1943
HindIII	AAGCTT	2 cut(s)	635, 680
HpaII	CCGG	3 cut(s)	208, 389, 1183
HphI	GGTGA	5 cut(s)	31, 718, 1865, 1934, 2027
Hpy166II	GTNNAC	3 cut(s)	285, 583, 1031
Hpy188I	TCNGA	4 cut(s)	111, 1501, 1516, 2203
Hpy8I	GTNNAC	3 cut(s)	285, 583, 1031
Hpy99I	CGWCG	2 cut(s)	61, 173
HpyAV	CCTTC	7 cut(s)	702, 856, 1226, 1404, 1405, 1636, 1913
HpyCH4III	ACNGT	3 cut(s)	1446, 1477, 1904
HpyCH4IV	ACGT	2 cut(s)	1033, 1777
HpyF3I	CTNAG	6 cut(s)	318, 912, 1790, 1911, 2064, 2215
HpySE526I	ACGT	2 cut(s)	1033, 1777
Hsp92I	GRCGYC	4 cut(s)	56, 302, 383, 1428
Hsp92II	CATG	7 cut(s)	104, 490, 553, 793, 835, 1334, 1366
HspAI	GCGC	5 cut(s)	66, 302, 1282, 1318, 1943
KasI	GGCGCC	1 cut(s)	301
Kpn2I	TCCGGA	2 cut(s)	388, 1182
Kzo9I	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
LguI	GCTCTTC	1 cut(s)	1584
LmnI	GCTCC	2 cut(s)	1185, 1279
LweI	GCATC	8 cut(s)	1150, 1407, 1536, 1766, 1852, 1956, 1993, 2197
MaeI	CTAG	5 cut(s)	705, 755, 998, 1595, 1700
MaeII	ACGT	2 cut(s)	1033, 1777
MaeIII	GTNAC	6 cut(s)	37, 49, 142, 1483, 1898, 2056
MalI	GATC	7 cut(s)	17, 108, 402, 996, 1382, 1562, 2019
MboI	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
MflI	RGATCY	1 cut(s)	994
MhlI	GDGCHC	1 cut(s)	425
Mly113I	GGCGCC	1 cut(s)	302
MlyI	GAGTC	6 cut(s)	128, 337, 467, 691, 1185, 1499
MmeI	TCCRAC	2 cut(s)	1320, 1682
Mph1103I	ATGCAT	1 cut(s)	1165
MroI	TCCGGA	2 cut(s)	388, 1182
MseI	TTAA	8 cut(s)	150, 633, 978, 1010, 1074, 1203, 1220, 1868
MslI	CAYNNNNRTG	1 cut(s)	99
MspA1I	CMGCKG	6 cut(s)	253, 296, 740, 1198, 1424, 2078
MspCI	CTTAAG	1 cut(s)	149
MspI	CCGG	3 cut(s)	208, 389, 1183
MspR9I	CCNGG	5 cut(s)	75, 124, 413, 515, 1687
Mva1269I	GAATGC	3 cut(s)	94, 1277, 1293
MvaI	CCWGG	5 cut(s)	75, 124, 413, 515, 1687
MvnI	CGCG	2 cut(s)	66, 1284
NarI	GGCGCC	1 cut(s)	302
NcoI	CCATGG	1 cut(s)	100
NdeII	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
NheI	GCTAGC	1 cut(s)	1594
NlaIII	CATG	7 cut(s)	104, 490, 553, 793, 835, 1334, 1366
NlaIV	GGNNCC	1 cut(s)	303
NmuCI	GTSAC	3 cut(s)	37, 142, 1898
NsiI	ATGCAT	1 cut(s)	1165
NspI	RCATGY	1 cut(s)	835
NspV	TTCGAA	1 cut(s)	274
PaeR7I	CTCGAG	1 cut(s)	1887
PagI	TCATGA	1 cut(s)	1330
PceI	AGGCCT	1 cut(s)	1108
PciSI	GCTCTTC	1 cut(s)	1584
PctI	GAATGC	3 cut(s)	94, 1277, 1293
PfeI	GAWTC	8 cut(s)	33, 78, 112, 271, 900, 1241, 1610, 1961
PflMI	CCANNNNNTGG	1 cut(s)	358
PleI	GAGTC	6 cut(s)	127, 336, 466, 691, 1185, 1499
PluTI	GGCGCC	1 cut(s)	305
PpsI	GAGTC	6 cut(s)	127, 336, 466, 691, 1185, 1499
Psp6I	CCWGG	5 cut(s)	73, 122, 411, 513, 1685
PspFI	CCCAGC	1 cut(s)	323
PspGI	CCWGG	5 cut(s)	73, 122, 411, 513, 1685
PspN4I	GGNNCC	1 cut(s)	303
PspPI	GGNCC	3 cut(s)	504, 524, 567
PstI	CTGCAG	1 cut(s)	295
PstNI	CAGNNNCTG	2 cut(s)	115, 2081
PsuI	RGATCY	1 cut(s)	994
PvuII	CAGCTG	3 cut(s)	740, 1424, 2078
RsaI	GTAC	2 cut(s)	1846, 1906
RsaNI	GTAC	2 cut(s)	1845, 1905
RseI	CAYNNNNRTG	1 cut(s)	99
SapI	GCTCTTC	1 cut(s)	1584
SaqAI	TTAA	8 cut(s)	150, 633, 978, 1010, 1074, 1203, 1220, 1868
Sau3AI	GATC	7 cut(s)	15, 106, 400, 994, 1380, 1560, 2017
Sau96I	GGNCC	3 cut(s)	504, 524, 567
ScaI	AGTACT	1 cut(s)	1906
SchI	GAGTC	6 cut(s)	128, 337, 467, 691, 1185, 1499
ScrFI	CCNGG	5 cut(s)	75, 124, 413, 515, 1687
SduI	GDGCHC	1 cut(s)	425
SfaNI	GCATC	8 cut(s)	1150, 1407, 1536, 1766, 1852, 1956, 1993, 2197
SfcI	CTRYAG	1 cut(s)	291
SfoI	GGCGCC	1 cut(s)	303
Sfr274I	CTCGAG	1 cut(s)	1887
SfuI	TTCGAA	1 cut(s)	274
SlaI	CTCGAG	1 cut(s)	1887
SmiMI	CAYNNNNRTG	1 cut(s)	99
SmlI	CTYRAG	5 cut(s)	149, 464, 961, 1541, 1887
SmoI	CTYRAG	5 cut(s)	149, 464, 961, 1541, 1887
SseBI	AGGCCT	1 cut(s)	1108
SspDI	GGCGCC	1 cut(s)	301
SspMI	CTAG	5 cut(s)	705, 755, 998, 1595, 1700
StuI	AGGCCT	1 cut(s)	1108
StyD4I	CCNGG	5 cut(s)	73, 122, 411, 513, 1685
StyI	CCWWGG	2 cut(s)	100, 438
TaaI	ACNGT	3 cut(s)	1446, 1477, 1904
TaiI	ACGT	2 cut(s)	1036, 1780
TaqI	TCGA	6 cut(s)	274, 665, 903, 1435, 1888, 1964
TaqII	GACCGA	1 cut(s)	2187
TatI	WGTACW	1 cut(s)	1904
TauI	GCSGC	4 cut(s)	299, 302, 437, 693
TfiI	GAWTC	8 cut(s)	33, 78, 112, 271, 900, 1241, 1610, 1961
Tru1I	TTAA	8 cut(s)	150, 633, 978, 1010, 1074, 1203, 1220, 1868
Tru9I	TTAA	8 cut(s)	150, 633, 978, 1010, 1074, 1203, 1220, 1868
TscAI	CASTG	6 cut(s)	89, 292, 340, 430, 590, 1449
TseFI	GTSAC	3 cut(s)	37, 142, 1898
Tsp45I	GTSAC	3 cut(s)	37, 142, 1898
TspGWI	ACGGA	2 cut(s)	178, 750
TspRI	CASTG	6 cut(s)	89, 292, 340, 430, 590, 1449
Van91I	CCANNNNNTGG	1 cut(s)	358
Vha464I	CTTAAG	1 cut(s)	149
XapI	RAATTY	5 cut(s)	203, 596, 794, 1004, 2163
XbaI	TCTAGA	2 cut(s)	704, 997
XceI	RCATGY	1 cut(s)	835
XhoI	CTCGAG	1 cut(s)	1887
XspI	CTAG	5 cut(s)	705, 755, 998, 1595, 1700
ZrmI	AGTACT	1 cut(s)	1906
Zsp2I	ATGCAT	1 cut(s)	1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.