Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007779

Physical Location & Seq

Genomic Coordinates Reverse (-)

92304197 .. 92310816

Gene Structure 6620 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00155800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGCTTCGAGAGCGATTTTCAGACGGAGCAGATTGGTCAGGGACTATGTGAGCGCCTCCTCCCGCACAACCCAGTGGCTGGGGCATTGCCACGGTGGCTTGAATTCCTCTTTCTCTTTCAGCACCGGCGTCAATGATGACGATAGATTTTCGATTGCCAAAGAGGAATTCCGGCGATTCCCCCAGCCACCTCCGATGGGTGTCAGATGGATCGCTCAGTCCGTTCGTACTGTCACCACCGCCACCGCCACCGCGCCGGCCAAACCGCCGCCCCCGGACGATGAGGATAACGAAGGCCGGGTCTGCGACAAAAGAAAGCAAGCTTCTCCGGAGGATTGCGATCAAGCCGTGCAAGGCCTCAGCACCACTGCCAAAGCCGCCAAGGCCAAGAAGCTGCACGAGTCTCAGAAGGTTTCCAAAATGTTGAAGAAAGTGTGGGCCACTTTTTTGGGGATCGGTCCCGCTTTGAGAGCTGTGGCTTCCATGAGCAGGGAGGACTGGGCCAATAAGCTTGCTCATTGGAAAAAGGAGATTGTGTCAACATTGCAGCATTACTGGTTGGGTTTTAAGCTACTCGGCACTGATGTGAGGATCTGTTCGAGATTGCTGCTCAAGCTTGCTGGTGGCAAGACTCTCTCCAGAAGGGAGAGGCAGCAGCTGACGCGTACAACAGCTGATATCTTTAGGCTAGTTCCATTTGCAGTGTTTATCATTGTTCCATTCATGGAATTCTTGCTGCCAGTATTCCTCAAGTTGTTTCCCAACATGTTGCCTTCAACCTTTCAAGACAAATTGAAAGAAGAGGAAGCAATGAAAAGGAAGCTAAAGGCAAGAATAGAGTATGCTAAGTTCCTTCAAGACACAGCCAAAGAAATGGCAAAGGAAGTTCAAAACTCAAGGAGCGGAGAAATCAAACAAACAGCAGAAGATCTTGATGGGTTTTTAAACAGGCTGAGGACGGGTGCAGGGGTCTCTAATGAGGAGATTTTGGGGTTTGCCAAGTTGTTTAATGATGAACTTACCCTTGATAACATCAGCAGGCCCCGTTTAGTCAATATGTGCAAATATATGGGTATAAGCCCTTATGGTACAGATGCATATTTGAGATATATGCTCCGGCAAAGACTCAGGCGGATTAAAGCTGATGATAAGTTAATTCAAGCGGAGGGTGTTGAGTCACTTTCAGAAGACGAGCTTCGTGAGGATTGCAGGGAGCGGGGTATGCTTGGATTGCGTTCTGTGGAAGAAATGCGTCAGCAGCTTCGTGATTGGTTGGATTTGTCTCTCAATCACTCCGTGCCATCCTCACTTTTGATCCTTTCCAGGGCCTTCTATGTGTCTGGAAAATTGAAGCCAGAGGAAGCTGTTCGAGCTACACTGACTTCTATGCCAGATGAAGTGGTGGATACGATTAATGTTACATCATTGCCATCTGAAGATTCTGTTTCTGAAAGGAGGAGGAAGTTGGAGTACTTAGAGATGCAGGAAGAGATGATCAAGGAGGAAGAAGAGCGGGAGGAAGAAGAGCAACGCAGAATCAAGGAATCTAAAGCTAGTCAAGAAGATGTGGCATTGAAAGAGATGACTATTCCAACAGCAAGAGAAGCACAAGAGCAAGCCAAGGAAAGGACACTAGAAAAGCAAGAGCAGCTTTGCGAACTAAGTCGTGCTTTGGCTGTTTTAGCTTCTGCATCTTCAGTGAGTACAGAGCGTGAAGAATTCCTGAGGCTCGTAAGCAAGGAGATTGAACTTTACAATAGCATGGTGGAAAAGGATGGTACAGATGGTGAAAAGGATGCCTTCAAGGCTTATAGAGCTGCTCGAGATGAAACTGATACTGCTGGTGTTGAAGACGAAGCTGATCATGTTTCATCAGCACTCATAGATAAGGTTGATTCGATGCTTCAAAATCTGGAAAAGGAAATTGATGATGTGGATGCGCAAATTGGTGATCGCTACCAACTACTTGACAGGGATTTTGATGGGAAAGTAACTGCTGAGGAGGTTGCAGCTGCTGCAAACTATCTGAAGAATACTTTAGGCAAGGAAGGGGTCCAAGAACTCATAGGCAACCTCTCGAAAGATAGAGATGGTAAAATTCTTGTGGAAGACATTGTGAAATTGGGAAGTCGGACTGAAGATGCAAACAACCCAGATGAAGATGGACGAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 ko04139 ko04212 ko05152 map03018 map04139 map04212 map05152

Pfam Domains

Protein Families

LETM1

Protein Analysis

724

Amino Acids

82.1

Weight (kDa)

5.5

Isoelectric Point (pI)

53.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LETM1_RBD	PF07766	212 - 445	3e-86	LETM1-like, RBD
EF-hand_7	PF13499	647 - 707	2.9e-06	EF-hand domain pair

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65540 AT1G65540 AT1G65540 AT3G59820 AT3G59820 AT3G59820 AT3G59820
fragaria_vesca	FvH4_1g00380 FvH4_1g00380
malus_domestica	MD02G1003200.v1.1 MD15G1146400.v1.1
prunus_persica	Prupe.7G268000_v2.0.a1
pyrus_communis	pycom02g00170 pycom15g13140
rosa_chinensis	RchiOBHm_Chr2g0084811
rosa_laevigata	RLG00000015642
rosa_multiflora	Rmu_ssc0000436.1_g000003
rosa_roxburghii	Rroxscaffold_2G00155800
rosa_rugosa	Rorug01G0456500
rosa_samantha	Rh2AG003600 Rh2BG005200 Rh2CG005600 Rh2DG005000
rosa_wichuraiana	Rw2G000410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1941
AccB7I	CCANNNNNTGG	1 cut(s)	79
AccBSI	CCGCTC	3 cut(s)	903, 1216, 1513
AccII	CGCG	2 cut(s)	254, 664
AccIII	TCCGGA	1 cut(s)	328
AclWI	GGATC	4 cut(s)	218, 461, 599, 1309
AcoI	YGGCCR	1 cut(s)	258
AcsI	RAATTY	5 cut(s)	103, 167, 728, 1718, 2097
AcuI	CTGAAG	4 cut(s)	1455, 1680, 2048, 2157
AcyI	GRCGYC	1 cut(s)	129
AdeI	CACNNNGTG	1 cut(s)	1297
AfaI	GTAC	6 cut(s)	229, 667, 1090, 1472, 1705, 1780
AfiI	CCNNNNNNNGG	5 cut(s)	79, 197, 489, 1324, 1626
AflIII	ACRYGT	2 cut(s)	662, 765
AjnI	CCWGG	1 cut(s)	1322
AjuI	GAANNNNNNNTTGG	2 cut(s)	152, 184
AleI	CACNNNNGTG	1 cut(s)	584
Alw26I	GTCTC	3 cut(s)	408, 976, 1287
AlwI	GGATC	4 cut(s)	218, 461, 599, 1309
AlwNI	CAGNNNCTG	3 cut(s)	79, 658, 2015
Ama87I	CYCGRG	1 cut(s)	1821
Aor13HI	TCCGGA	1 cut(s)	328
AoxI	GGCC	8 cut(s)	258, 295, 355, 384, 438, 501, 1040, 1326
ApoI	RAATTY	5 cut(s)	103, 167, 728, 1718, 2097
ArsI	GACNNNNNNTTYG	4 cut(s)	285, 317, 1961, 1993
AseI	ATTAAT	1 cut(s)	1413
Asp700I	GAANNNNTTC	1 cut(s)	1365
AspLEI	GCGC	3 cut(s)	56, 256, 1942
AspS9I	GGNCC	6 cut(s)	438, 458, 501, 1041, 1326, 2053
AsuC2I	CCSGG	2 cut(s)	275, 299
AsuHPI	GGTGA	3 cut(s)	226, 1799, 1961
AvaI	CYCGRG	1 cut(s)	1821
AvaII	GGWCC	2 cut(s)	458, 2053
AxyI	CCTNAGG	1 cut(s)	1724
BarI	GAAGNNNNNNTAC	2 cut(s)	1454, 1486
BauI	CACGAG	1 cut(s)	398
BbsI	GAAGAC	3 cut(s)	1194, 1857, 2115
BbvCI	CCTCAGC	3 cut(s)	359, 953, 1998
BceAI	ACGGC	1 cut(s)	332
BcgI	CGANNNNNNTGC	2 cut(s)	589, 623
BciT130I	CCWGG	1 cut(s)	1324
BciVI	GTATCC	1 cut(s)	1399
BclI	TGATCA	2 cut(s)	1494, 1861
BcnI	CCSGG	2 cut(s)	275, 299
BcoDI	GTCTC	3 cut(s)	408, 976, 1287
BfaI	CTAG	3 cut(s)	689, 1554, 1634
BfoI	RGCGCY	1 cut(s)	57
BfuI	GTATCC	1 cut(s)	1399
BglI	GCCNNNNNGGC	3 cut(s)	96, 383, 1805
BglII	AGATCT	1 cut(s)	928
BmcAI	AGTACT	1 cut(s)	1472
Bme1390I	CCNGG	3 cut(s)	275, 299, 1324
Bme18I	GGWCC	2 cut(s)	458, 2053
BmeT110I	CYCGRG	1 cut(s)	1821
BmgT120I	GGNCC	6 cut(s)	438, 458, 501, 1041, 1326, 2053
BmiI	GGNNCC	3 cut(s)	460, 1043, 2054
BmrFI	CCNGG	3 cut(s)	275, 299, 1324
BmrI	ACTGGG	2 cut(s)	67, 508
BmsI	GCATC	7 cut(s)	1084, 1470, 1700, 1786, 1890, 1927, 2131
BmuI	ACTGGG	2 cut(s)	67, 508
BpiI	GAAGAC	3 cut(s)	1194, 1857, 2115
BpmI	CTGGAG	1 cut(s)	622
Bpu10I	CCTNAGC	3 cut(s)	359, 953, 1998
BpuEI	CTTGAG	3 cut(s)	596, 734, 880
BpuMI	CCSGG	2 cut(s)	275, 299
BsaBI	GATNNNNATC	1 cut(s)	339
BsaHI	GRCGYC	1 cut(s)	129
BsaI	GGTCTC	1 cut(s)	976
BsaJI	CCNNGG	5 cut(s)	91, 273, 381, 1323, 1620
BsaWI	WCCGGW	1 cut(s)	328
BsaXI	ACNNNNNCTCC	2 cut(s)	521, 551
Bsc4I	CCNNNNNNNGG	5 cut(s)	79, 197, 489, 1324, 1626
Bse118I	RCCGGY	2 cut(s)	125, 256
Bse1I	ACTGG	4 cut(s)	73, 503, 560, 740
Bse21I	CCTNAGG	1 cut(s)	1724
Bse3DI	GCAATG	4 cut(s)	85, 542, 816, 1424
Bse8I	GATNNNNATC	1 cut(s)	339
BseAI	TCCGGA	1 cut(s)	328
BseBI	CCWGG	1 cut(s)	1324
BseDI	CCNNGG	5 cut(s)	91, 273, 381, 1323, 1620
BseGI	GGATG	4 cut(s)	1301, 1780, 1801, 1942
BseJI	GATNNNNATC	1 cut(s)	339
BseLI	CCNNNNNNNGG	5 cut(s)	79, 197, 489, 1324, 1626
BseMI	GCAATG	4 cut(s)	85, 542, 816, 1424
BseMII	CTCAG	7 cut(s)	230, 373, 419, 944, 1141, 1715, 1989
BseNI	ACTGG	4 cut(s)	73, 503, 560, 740
BseRI	GAGGAG	4 cut(s)	49, 995, 1471, 2015
BseYI	CCCAGC	2 cut(s)	79, 183
BsgI	GTGCAG	2 cut(s)	380, 984
Bsh1236I	CGCG	2 cut(s)	254, 664
BshFI	GGCC	8 cut(s)	260, 297, 357, 386, 440, 503, 1042, 1328
BsiHKCI	CYCGRG	1 cut(s)	1821
BsiSI	CCGG	7 cut(s)	126, 172, 257, 275, 298, 329, 1117
BslFI	GGGAC	2 cut(s)	56, 444
BslI	CCNNNNNNNGG	5 cut(s)	79, 197, 489, 1324, 1626
BsmAI	GTCTC	3 cut(s)	408, 976, 1287
BsmFI	GGGAC	2 cut(s)	56, 444
BsnI	GGCC	8 cut(s)	260, 297, 357, 386, 440, 503, 1042, 1328
Bso31I	GGTCTC	1 cut(s)	976
BsoBI	CYCGRG	1 cut(s)	1821
Bsp13I	TCCGGA	1 cut(s)	328
Bsp143I	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
BspANI	GGCC	8 cut(s)	260, 297, 357, 386, 440, 503, 1042, 1328
BspCNI	CTCAG	7 cut(s)	229, 372, 418, 945, 1140, 1716, 1990
BspEI	TCCGGA	1 cut(s)	328
BspFNI	CGCG	2 cut(s)	254, 664
BspLI	GGNNCC	3 cut(s)	460, 1043, 2054
BspPI	GGATC	4 cut(s)	218, 461, 599, 1309
BspQI	GCTCTTC	2 cut(s)	1503, 1518
BspTNI	GGTCTC	1 cut(s)	976
BsrBI	CCGCTC	3 cut(s)	903, 1216, 1513
BsrDI	GCAATG	4 cut(s)	85, 542, 816, 1424
BsrFI	RCCGGY	2 cut(s)	125, 256
BsrI	ACTGG	4 cut(s)	73, 503, 560, 740
BssAI	RCCGGY	2 cut(s)	125, 256
BssECI	CCNNGG	5 cut(s)	91, 273, 381, 1323, 1620
BssMI	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
BssNI	GRCGYC	1 cut(s)	129
BssSI	CACGAG	1 cut(s)	398
BssT1I	CCWWGG	2 cut(s)	381, 1620
Bst2BI	CACGAG	1 cut(s)	398
Bst2UI	CCWGG	1 cut(s)	1324
Bst4CI	ACNGT	2 cut(s)	95, 232
Bst6I	CTCTTC	4 cut(s)	795, 1482, 1503, 1518
BstACI	GRCGYC	1 cut(s)	129
BstAPI	GCANNNNNTGC	1 cut(s)	2015
BstC8I	GCNNGC	6 cut(s)	258, 321, 513, 618, 1040, 1617
BstDSI	CCRYGG	1 cut(s)	91
BstF5I	GGATG	4 cut(s)	1301, 1780, 1801, 1942
BstFNI	CGCG	2 cut(s)	254, 664
BstH2I	RGCGCY	1 cut(s)	57
BstHHI	GCGC	3 cut(s)	56, 256, 1942
BstKTI	GATC	9 cut(s)	213, 343, 456, 594, 931, 1317, 1497, 1864, 1954
BstMAI	GTCTC	3 cut(s)	408, 976, 1287
BstMBI	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
BstNI	CCWGG	1 cut(s)	1324
BstNSI	RCATGY	1 cut(s)	769
BstSCI	CCNGG	3 cut(s)	273, 297, 1322
BstUI	CGCG	2 cut(s)	254, 664
BstV2I	GAAGAC	3 cut(s)	1194, 1857, 2115
BstX2I	RGATCY	2 cut(s)	591, 928
BstXI	CCANNNNNNTGG	2 cut(s)	448, 874
BstYI	RGATCY	2 cut(s)	591, 928
Bsu36I	CCTNAGG	1 cut(s)	1724
BsuI	GTATCC	1 cut(s)	1399
BsuRI	GGCC	8 cut(s)	260, 297, 357, 386, 440, 503, 1042, 1328
BtgI	CCRYGG	1 cut(s)	91
BtsCI	GGATG	4 cut(s)	1301, 1780, 1801, 1942
BtsI	GCAGTG	2 cut(s)	366, 708
BtsIMutI	CAGTG	6 cut(s)	80, 366, 579, 708, 1376, 1704
Cac8I	GCNNGC	6 cut(s)	258, 321, 513, 618, 1040, 1617
CaiI	CAGNNNCTG	3 cut(s)	79, 658, 2015
CfoI	GCGC	3 cut(s)	56, 256, 1942
Cfr10I	RCCGGY	2 cut(s)	125, 256
Cfr13I	GGNCC	6 cut(s)	438, 458, 501, 1041, 1326, 2053
CseI	GACGC	3 cut(s)	118, 670, 1241
Csp6I	GTAC	6 cut(s)	228, 666, 1089, 1471, 1704, 1779
CviAII	CATG	5 cut(s)	484, 724, 766, 1762, 1865
CviQI	GTAC	6 cut(s)	228, 666, 1089, 1471, 1704, 1779
DpnI	GATC	9 cut(s)	212, 342, 455, 593, 930, 1316, 1496, 1863, 1953
DpnII	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
DraI	TTTAAA	1 cut(s)	945
DraIII	CACNNNGTG	1 cut(s)	1297
EaeI	YGGCCR	1 cut(s)	258
Eam1104I	CTCTTC	4 cut(s)	795, 1482, 1503, 1518
EarI	CTCTTC	4 cut(s)	795, 1482, 1503, 1518
EciI	GGCGGA	1 cut(s)	1147
Eco130I	CCWWGG	2 cut(s)	381, 1620
Eco147I	AGGCCT	1 cut(s)	357
Eco31I	GGTCTC	1 cut(s)	976
Eco32I	GATATC	1 cut(s)	679
Eco47I	GGWCC	2 cut(s)	458, 2053
Eco57I	CTGAAG	4 cut(s)	1455, 1680, 2048, 2157
Eco81I	CCTNAGG	1 cut(s)	1724
Eco88I	CYCGRG	1 cut(s)	1821
EcoO109I	RGGNCCY	2 cut(s)	1041, 1326
EcoRI	GAATTC	4 cut(s)	103, 167, 728, 1718
EcoRII	CCWGG	1 cut(s)	1322
EcoRV	GATATC	1 cut(s)	679
EcoT14I	CCWWGG	2 cut(s)	381, 1620
EcoT22I	ATGCAT	1 cut(s)	1099
ErhI	CCWWGG	2 cut(s)	381, 1620
FaeI	CATG	5 cut(s)	487, 727, 769, 1765, 1868
FalI	AAGNNNNNCTT	8 cut(s)	1179, 1211, 1635, 1667, 1654, 1686, 1784, 1816
FaqI	GGGAC	2 cut(s)	56, 444
FatI	CATG	5 cut(s)	483, 723, 765, 1761, 1864
FauI	CCCGC	4 cut(s)	71, 469, 1209, 1506
FbaI	TGATCA	2 cut(s)	1494, 1861
FokI	GGATG	4 cut(s)	1288, 1787, 1808, 1949
FspBI	CTAG	3 cut(s)	689, 1554, 1634
FspI	TGCGCA	1 cut(s)	1941
GlaI	GCGC	3 cut(s)	55, 255, 1941
GsaI	CCCAGC	2 cut(s)	83, 187
GsuI	CTGGAG	1 cut(s)	622
HaeII	RGCGCY	1 cut(s)	57
HaeIII	GGCC	8 cut(s)	260, 297, 357, 386, 440, 503, 1042, 1328
HapII	CCGG	7 cut(s)	126, 172, 257, 275, 298, 329, 1117
HgaI	GACGC	3 cut(s)	118, 670, 1241
HhaI	GCGC	3 cut(s)	56, 256, 1942
Hin1I	GRCGYC	1 cut(s)	129
Hin1II	CATG	5 cut(s)	487, 727, 769, 1765, 1868
Hin6I	GCGC	3 cut(s)	54, 254, 1940
HinP1I	GCGC	3 cut(s)	54, 254, 1940
HincII	GTYRAC	1 cut(s)	540
HindII	GTYRAC	1 cut(s)	540
HindIII	AAGCTT	3 cut(s)	321, 509, 614
HinfI	GANTC	9 cut(s)	177, 401, 631, 1125, 1175, 1439, 1536, 1544, 1895
HpaII	CCGG	7 cut(s)	126, 172, 257, 275, 298, 329, 1117
HphI	GGTGA	3 cut(s)	226, 1799, 1961
Hpy166II	GTNNAC	1 cut(s)	540
Hpy188I	TCNGA	9 cut(s)	23, 195, 206, 408, 1186, 1435, 1450, 2028, 2133
Hpy8I	GTNNAC	1 cut(s)	540
HpyAV	CCTTC	8 cut(s)	287, 403, 636, 783, 863, 1339, 1810, 2042
HpyCH4III	ACNGT	2 cut(s)	95, 232
Hsp92I	GRCGYC	1 cut(s)	129
Hsp92II	CATG	5 cut(s)	487, 727, 769, 1765, 1868
HspAI	GCGC	3 cut(s)	54, 254, 1940
Kpn2I	TCCGGA	1 cut(s)	328
KroI	GCCGGC	1 cut(s)	256
KroNI	GCCGGC	1 cut(s)	258
Ksp22I	TGATCA	2 cut(s)	1494, 1861
Kzo9I	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
LguI	GCTCTTC	2 cut(s)	1503, 1518
LmnI	GCTCC	4 cut(s)	27, 900, 1119, 1213
LweI	GCATC	7 cut(s)	1084, 1470, 1700, 1786, 1890, 1927, 2131
MaeI	CTAG	3 cut(s)	689, 1554, 1634
MaeIII	GTNAC	4 cut(s)	232, 1176, 1417, 1990
MalI	GATC	9 cut(s)	212, 342, 455, 593, 930, 1316, 1496, 1863, 1953
MbiI	CCGCTC	3 cut(s)	903, 1216, 1513
MboI	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
MflI	RGATCY	2 cut(s)	591, 928
MluI	ACGCGT	1 cut(s)	662
MlyI	GAGTC	4 cut(s)	410, 625, 1119, 1184
MmeI	TCCRAC	4 cut(s)	1254, 1446, 1616, 2111
Mph1103I	ATGCAT	1 cut(s)	1099
MroI	TCCGGA	1 cut(s)	328
MroNI	GCCGGC	1 cut(s)	256
MroXI	GAANNNNTTC	1 cut(s)	1365
MseI	TTAA	6 cut(s)	567, 944, 1008, 1137, 1154, 1413
MslI	CAYNNNNRTG	1 cut(s)	584
MspA1I	CMGCKG	3 cut(s)	658, 674, 2012
MspI	CCGG	7 cut(s)	126, 172, 257, 275, 298, 329, 1117
MspR9I	CCNGG	3 cut(s)	275, 299, 1324
MvaI	CCWGG	1 cut(s)	1324
MvnI	CGCG	2 cut(s)	254, 664
NaeI	GCCGGC	1 cut(s)	258
NciI	CCSGG	2 cut(s)	275, 299
NdeII	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
NgoMIV	GCCGGC	1 cut(s)	256
NlaIII	CATG	5 cut(s)	487, 727, 769, 1765, 1868
NlaIV	GGNNCC	3 cut(s)	460, 1043, 2054
NmeAIII	GCCGAG	1 cut(s)	555
NmuCI	GTSAC	2 cut(s)	232, 1176
NsbI	TGCGCA	1 cut(s)	1941
NsiI	ATGCAT	1 cut(s)	1099
NspI	RCATGY	1 cut(s)	769
OliI	CACNNNNGTG	1 cut(s)	584
PaeR7I	CTCGAG	1 cut(s)	1821
PceI	AGGCCT	1 cut(s)	357
PciI	ACATGT	1 cut(s)	765
PciSI	GCTCTTC	2 cut(s)	1503, 1518
PcsI	WCGNNNNNNNCGW	1 cut(s)	219
PdiI	GCCGGC	1 cut(s)	258
PdmI	GAANNNNTTC	1 cut(s)	1365
PfeI	GAWTC	5 cut(s)	177, 1439, 1536, 1544, 1895
PflMI	CCANNNNNTGG	1 cut(s)	79
PleI	GAGTC	4 cut(s)	409, 625, 1119, 1183
PpsI	GAGTC	4 cut(s)	409, 625, 1119, 1183
PscI	ACATGT	1 cut(s)	765
PshBI	ATTAAT	1 cut(s)	1413
Psp6I	CCWGG	1 cut(s)	1322
PspFI	CCCAGC	2 cut(s)	79, 183
PspGI	CCWGG	1 cut(s)	1322
PspN4I	GGNNCC	3 cut(s)	460, 1043, 2054
PspPI	GGNCC	6 cut(s)	438, 458, 501, 1041, 1326, 2053
PsrI	GAACNNNNNNTAC	2 cut(s)	833, 865
PstNI	CAGNNNCTG	3 cut(s)	79, 658, 2015
PsuI	RGATCY	2 cut(s)	591, 928
PvuII	CAGCTG	3 cut(s)	658, 674, 2012
RsaI	GTAC	6 cut(s)	229, 667, 1090, 1472, 1705, 1780
RsaNI	GTAC	6 cut(s)	228, 666, 1089, 1471, 1704, 1779
RseI	CAYNNNNRTG	1 cut(s)	584
SapI	GCTCTTC	2 cut(s)	1503, 1518
SaqAI	TTAA	6 cut(s)	567, 944, 1008, 1137, 1154, 1413
Sau3AI	GATC	9 cut(s)	210, 340, 453, 591, 928, 1314, 1494, 1861, 1951
Sau96I	GGNCC	6 cut(s)	438, 458, 501, 1041, 1326, 2053
ScaI	AGTACT	1 cut(s)	1472
SchI	GAGTC	4 cut(s)	410, 625, 1119, 1184
ScrFI	CCNGG	3 cut(s)	275, 299, 1324
SfaNI	GCATC	7 cut(s)	1084, 1470, 1700, 1786, 1890, 1927, 2131
Sfr274I	CTCGAG	1 cut(s)	1821
SgrAI	CRCCGGYG	1 cut(s)	125
SinI	GGWCC	2 cut(s)	458, 2053
SlaI	CTCGAG	1 cut(s)	1821
SmiMI	CAYNNNNRTG	1 cut(s)	584
SmlI	CTYRAG	4 cut(s)	611, 749, 895, 1821
SmoI	CTYRAG	4 cut(s)	611, 749, 895, 1821
SseBI	AGGCCT	1 cut(s)	357
SspMI	CTAG	3 cut(s)	689, 1554, 1634
StuI	AGGCCT	1 cut(s)	357
StyD4I	CCNGG	3 cut(s)	273, 297, 1322
StyI	CCWWGG	2 cut(s)	381, 1620
TaaI	ACNGT	2 cut(s)	95, 232
TaqI	TCGA	7 cut(s)	8, 152, 599, 1369, 1822, 1898, 2078
TaqII	GACCGA	1 cut(s)	446
TatI	WGTACW	2 cut(s)	1470, 1703
TauI	GCSGC	2 cut(s)	271, 380
TfiI	GAWTC	5 cut(s)	177, 1439, 1536, 1544, 1895
Tru1I	TTAA	6 cut(s)	567, 944, 1008, 1137, 1154, 1413
Tru9I	TTAA	6 cut(s)	567, 944, 1008, 1137, 1154, 1413
TscAI	CASTG	6 cut(s)	80, 373, 586, 708, 1383, 1704
TseFI	GTSAC	2 cut(s)	232, 1176
Tsp45I	GTSAC	2 cut(s)	232, 1176
TspDTI	ATGAA	7 cut(s)	712, 827, 1029, 1410, 1842, 1860, 2172
TspGWI	ACGGA	3 cut(s)	40, 211, 1285
TspRI	CASTG	6 cut(s)	80, 373, 586, 708, 1383, 1704
Van91I	CCANNNNNTGG	1 cut(s)	79
VpaK11BI	GGWCC	2 cut(s)	458, 2053
VspI	ATTAAT	1 cut(s)	1413
XapI	RAATTY	5 cut(s)	103, 167, 728, 1718, 2097
XceI	RCATGY	1 cut(s)	769
XhoI	CTCGAG	1 cut(s)	1821
XmnI	GAANNNNTTC	1 cut(s)	1365
XspI	CTAG	3 cut(s)	689, 1554, 1634
ZrmI	AGTACT	1 cut(s)	1472
Zsp2I	ATGCAT	1 cut(s)	1099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.