MD15G1206200.v1.1

Ectonucleotide pyrophosphatase phosphodiesterase family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0006656
Physical Location & Seq
Reverse (-)
16380872 .. 16382628
1757 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1206200.v1.1.491

Sequence Viewer

Length: 1488 bp
ATGGGTTCGGATTTGACTCCCGTGAAATCCACTCCGATTCCGACCCACGACGAAGACTCGCGGTCGCGGAGCCCATCTGCGGCGCTGCTCTCTTTCAACACCGACCCCTCCGCCTCTCCGACCCCATCGTCTTCCCCTTCTCACAAACCCAGCACCACCGTCATCTTCATCTCTCTCCTCCTCACCACCTGCGTTGCTCTCTCCGCCGCCTTCGCCTTCGCCTTTCTATTCTTCTCCAACTCACCGAAATCCGCGCCCGTCTACGAGTCCTCGTCACTGGAATACAAGGCTCGAGCTTTGAGAAAACTCGATCATCCGGTTGTTCTGTTGGTTTCCTCGGATGGGTTTCGATTCGGGTACCAGTTCAAGGCGCCGACGCCGAATATCCGCCGCCTCATCGCCAACGGGACGGAGGCGGAAGAGGGTTTGATTCCGGTGTTTCCAACTCTGACATTTCCTAACCATTACTCAATTGTCACAGGTCTTTACCCTGCTTACCATGGAATTGTCGACAACCACTTTGTGGACCCGCACACAGGGGAGTCCTTCACCATGAGAAGCCACGAGTCCAAGTGGTGGCTCGGCGAGCCGCTGTGGGAGACGGTGGCGAATCATGGTTTGAAGGCTGCCACTTACTTCTGGCCGGGTTCTGAGGTAATTAAAGGTTCTTGGACTTGCCCTGATAAGCTTTGTATGCAGTATAATGGCTCTGTTCCTTTCGAACAACGGGTTGATGCCGTTTTGAATTACTTTGATATGCCTAGTAGTGAAATTCCTGTGTTTATGACTCTGTACTTCGAGGATCCCGATCATCAGGGTCACCAGGTCGGGCCTGACGATCGGGAGATTACTGAAGCTGTTGCTGGAATTGATAAAATGATTGGGAGGTTGATTGAAGGTTTAGAGAAAAAAGGTGTTTTCGAGGATGTTACTATAATTTTGGTGGGTGATCATGGGATGGTTGGTACATGCGATAAAAAGCTAATTTATTTAAGTGATTTGGCCCCTTGGATTGAAATTCCTAATGATTGGGTCCAGTCACTTACTCCATTGCTCGCCATTCGTCCACCTTCAGGTGTTGATCCTGTGAGTGTTGTTGAGAAGATGAATGAAGGGTTGAAATCGGGCAAGGTTGAGAATGGGAAGAATTTGAGAGTGTATCTTAAGGAGGAGCTTCCTAGTCGGCTCCATTATGCAGCGAGTGATCGAATTACGCCTATAGTAGGGTTGGTTGAAGAGGGATTTAAGGTAGAACAAAAGAGGACGAAAGGGAGAGAGTGTGGAGGTGCACACGGTTATGACAATGCTTTTTTCTCCATGCGGACCATATTTGTTGGGCATGGTCCTCGGTTTGAAAGAGGTCGCAAGGTTCCTAGTTTTGAAAATGTCCACATATACAATTTGGTCACAACGATTCTCAATATTCAGGGTGCTCCTAACAATGGATCTGCGTCATTTCCAAAGTCTGTTCTTTTGCCTGCTCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002276 GO:0002366 GO:0002376 GO:0002682 GO:0002683 GO:0002684 GO:0002694 GO:0002695 GO:0002697 GO:0002698 GO:0002699 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004528 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006163 GO:0006220 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006955 GO:0008081 GO:0008150 GO:0008152 GO:0008270 GO:0008285 GO:0009056 GO:0009058 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009143 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009897 GO:0009986 GO:0009987 GO:0016020 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017144 GO:0018130 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0033003 GO:0033004 GO:0033006 GO:0033007 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0036230 GO:0042127 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045321 GO:0045575 GO:0046034 GO:0046434 GO:0046483 GO:0046700 GO:0046872 GO:0046914 GO:0047429 GO:0048471 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050727 GO:0050728 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0050865 GO:0050866 GO:0050896 GO:0055086 GO:0065007 GO:0070663 GO:0070664 GO:0070666 GO:0070667 GO:0071704 GO:0071944 GO:0072521 GO:0072527 GO:0080134 GO:0090304 GO:0090305 GO:0098552 GO:1901135 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko00500 ko00740 ko00760 ko00770 ko01100 map00230 map00240 map00500 map00740 map00760 map00770 map01100
Pfam Domains
Protein Families
Phosphodiest

Protein Analysis

496

Amino Acids

54.61

Weight (kDa)

5.99

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphodiest PF01663 108 - 434 6.7e-107 Type I phosphodiesterase / nucleotide pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 197
AasI GACNNNNNNGTC 1 cut(s) 127
Acc36I ACCTGC 1 cut(s) 197
Acc65I GGTACC 1 cut(s) 357
AccB1I GGYRCC 2 cut(s) 357, 370
AccB7I CCANNNNNTGG 2 cut(s) 523, 576
AccI GTMKAC 2 cut(s) 261, 510
AccII CGCG 3 cut(s) 61, 67, 254
AclWI GGATC 4 cut(s) 797, 810, 1076, 1453
AcoI YGGCCR 1 cut(s) 641
AcsI RAATTY 3 cut(s) 771, 1017, 1147
AcuI CTGAAG 2 cut(s) 873, 1056
AcyI GRCGYC 2 cut(s) 371, 377
AdeI CACNNNGTG 1 cut(s) 523
AfaI GTAC 3 cut(s) 359, 794, 967
AfiI CCNNNNNNNGG 9 cut(s) 79, 342, 367, 523, 536, 576, 1073, 1223, 1442
AflII CTTAAG 1 cut(s) 1163
AhdI GACNNNNNGTC 1 cut(s) 61
AjnI CCWGG 1 cut(s) 822
AluBI AGCT 5 cut(s) 296, 688, 857, 982, 1174
AluI AGCT 5 cut(s) 296, 688, 857, 982, 1174
Alw21I GWGCWC 2 cut(s) 1291, 1435
Alw26I GTCTC 1 cut(s) 593
Alw44I GTGCAC 1 cut(s) 1287
AlwI GGATC 4 cut(s) 797, 810, 1076, 1453
Ama87I CYCGRG 1 cut(s) 291
AoxI GGCC 3 cut(s) 641, 830, 1002
ApaLI GTGCAC 1 cut(s) 1287
ApeKI GCWGC 3 cut(s) 85, 626, 1196
ApoI RAATTY 3 cut(s) 771, 1017, 1147
ArsI GACNNNNNNTTYG 2 cut(s) 503, 535
Asp718I GGTACC 1 cut(s) 357
AspLEI GCGC 3 cut(s) 85, 256, 373
AspS9I GGNCC 6 cut(s) 526, 830, 1003, 1033, 1323, 1343
AsuC2I CCSGG 1 cut(s) 645
AsuHPI GGTGA 5 cut(s) 175, 234, 541, 812, 959
AsuII TTCGAA 1 cut(s) 720
AvaI CYCGRG 1 cut(s) 291
AvaII GGWCC 4 cut(s) 526, 1033, 1323, 1343
BaeGI GKGCMC 1 cut(s) 1291
BamHI GGATCC 1 cut(s) 802
BanI GGYRCC 2 cut(s) 357, 370
BanII GRGCYC 1 cut(s) 74
BauI CACGAG 1 cut(s) 563
BbsI GAAGAC 2 cut(s) 60, 123
Bbv12I GWGCWC 2 cut(s) 1291, 1435
BbvI GCAGC 3 cut(s) 72, 613, 1208
BccI CCATC 4 cut(s) 82, 133, 335, 952
BceAI ACGGC 1 cut(s) 722
BcgI CGANNNNNNTGC 2 cut(s) 1328, 1362
BciT130I CCWGG 1 cut(s) 824
BclI TGATCA 1 cut(s) 949
BcnI CCSGG 1 cut(s) 645
BcoDI GTCTC 1 cut(s) 593
BfaI CTAG 3 cut(s) 762, 1179, 1374
BfmI CTRYAG 1 cut(s) 1218
BfoI RGCGCY 2 cut(s) 86, 374
BfrI CTTAAG 1 cut(s) 1163
BfuAI ACCTGC 1 cut(s) 197
BisI GCNGC 7 cut(s) 81, 86, 207, 391, 590, 627, 1197
BlsI GCNGC 7 cut(s) 82, 87, 208, 392, 591, 628, 1198
Bme1390I CCNGG 2 cut(s) 645, 824
Bme18I GGWCC 4 cut(s) 526, 1033, 1323, 1343
BmeRI GACNNNNNGTC 1 cut(s) 61
BmeT110I CYCGRG 1 cut(s) 291
BmgT120I GGNCC 6 cut(s) 526, 830, 1003, 1033, 1323, 1343
BmiI GGNNCC 9 cut(s) 71, 359, 372, 528, 804, 1005, 1034, 1187, 1371
BmrFI CCNGG 2 cut(s) 645, 824
BmsI GCATC 1 cut(s) 724
BpiI GAAGAC 2 cut(s) 60, 123
Bpu14I TTCGAA 1 cut(s) 720
BpuMI CCSGG 1 cut(s) 645
BsaBI GATNNNNATC 1 cut(s) 807
BsaHI GRCGYC 2 cut(s) 371, 377
BsaJI CCNNGG 4 cut(s) 336, 499, 1007, 1346
BsaWI WCCGGW 2 cut(s) 316, 433
BsaXI ACNNNNNCTCC 2 cut(s) 1264, 1294
Bsc4I CCNNNNNNNGG 9 cut(s) 79, 342, 367, 523, 536, 576, 1073, 1223, 1442
Bse1I ACTGG 3 cut(s) 282, 361, 1036
Bse3DI GCAATG 1 cut(s) 1049
Bse8I GATNNNNATC 1 cut(s) 807
BseBI CCWGG 1 cut(s) 824
BseDI CCNNGG 4 cut(s) 336, 499, 1007, 1346
BseGI GGATG 4 cut(s) 313, 346, 931, 963
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 9 cut(s) 79, 342, 367, 523, 536, 576, 1073, 1223, 1442
BseMI GCAATG 1 cut(s) 1049
BseMII CTCAG 1 cut(s) 642
BseNI ACTGG 3 cut(s) 282, 361, 1036
BseRI GAGGAG 3 cut(s) 167, 170, 1184
BseSI GKGCMC 1 cut(s) 1291
BseXI GCAGC 3 cut(s) 72, 613, 1208
BseYI CCCAGC 1 cut(s) 149
Bsh1236I CGCG 3 cut(s) 61, 67, 254
Bsh1285I CGRYCG 2 cut(s) 65, 841
BshFI GGCC 3 cut(s) 643, 832, 1004
BshNI GGYRCC 2 cut(s) 357, 370
BsiEI CGRYCG 2 cut(s) 65, 841
BsiHKAI GWGCWC 2 cut(s) 1291, 1435
BsiHKCI CYCGRG 1 cut(s) 291
BsiSI CCGG 3 cut(s) 317, 434, 644
BslFI GGGAC 1 cut(s) 421
BslI CCNNNNNNNGG 9 cut(s) 79, 342, 367, 523, 536, 576, 1073, 1223, 1442
BsmAI GTCTC 1 cut(s) 593
BsmBI CGTCTC 1 cut(s) 593
BsmFI GGGAC 1 cut(s) 421
BsnI GGCC 3 cut(s) 643, 832, 1004
BsoBI CYCGRG 1 cut(s) 291
Bsp119I TTCGAA 1 cut(s) 720
Bsp1286I GDGCHC 3 cut(s) 74, 1291, 1435
Bsp143I GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
Bsp19I CCATGG 1 cut(s) 499
BspANI GGCC 3 cut(s) 643, 832, 1004
BspCNI CTCAG 1 cut(s) 643
BspFNI CGCG 3 cut(s) 61, 67, 254
BspLI GGNNCC 9 cut(s) 71, 359, 372, 528, 804, 1005, 1034, 1187, 1371
BspMI ACCTGC 1 cut(s) 197
BspPI GGATC 4 cut(s) 797, 810, 1076, 1453
BspT104I TTCGAA 1 cut(s) 720
BspT107I GGYRCC 2 cut(s) 357, 370
BspTI CTTAAG 1 cut(s) 1163
BsrDI GCAATG 1 cut(s) 1049
BsrI ACTGG 3 cut(s) 282, 361, 1036
BssECI CCNNGG 4 cut(s) 336, 499, 1007, 1346
BssMI GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
BssNI GRCGYC 2 cut(s) 371, 377
BssSI CACGAG 1 cut(s) 563
BssT1I CCWWGG 2 cut(s) 499, 1007
Bst2BI CACGAG 1 cut(s) 563
Bst2UI CCWGG 1 cut(s) 824
Bst4CI ACNGT 3 cut(s) 160, 604, 1295
Bst6I CTCTTC 2 cut(s) 414, 1230
BstACI GRCGYC 2 cut(s) 371, 377
BstAFI CTTAAG 1 cut(s) 1163
BstBI TTCGAA 1 cut(s) 720
BstC8I GCNNGC 3 cut(s) 587, 1056, 1479
BstDEI CTNAG 1 cut(s) 651
BstDSI CCRYGG 1 cut(s) 499
BstEII GGTNACC 1 cut(s) 818
BstENI CCTNNNNNAGG 1 cut(s) 1221
BstF5I GGATG 4 cut(s) 313, 346, 931, 963
BstFNI CGCG 3 cut(s) 61, 67, 254
BstH2I RGCGCY 2 cut(s) 86, 374
BstHHI GCGC 3 cut(s) 85, 256, 373
BstKTI GATC 8 cut(s) 313, 805, 811, 841, 952, 1084, 1207, 1448
BstMAI GTCTC 1 cut(s) 593
BstMBI GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
BstMCI CGRYCG 2 cut(s) 65, 841
BstMWI GCNNNNNNNGC 4 cut(s) 203, 212, 586, 694
BstNI CCWGG 1 cut(s) 824
BstNSI RCATGY 1 cut(s) 972
BstPI GGTNACC 1 cut(s) 818
BstSCI CCNGG 2 cut(s) 643, 822
BstSFI CTRYAG 1 cut(s) 1218
BstSLI GKGCMC 1 cut(s) 1291
BstUI CGCG 3 cut(s) 61, 67, 254
BstV1I GCAGC 3 cut(s) 72, 613, 1208
BstV2I GAAGAC 2 cut(s) 60, 123
BstX2I RGATCY 2 cut(s) 802, 1445
BstYI RGATCY 2 cut(s) 802, 1445
BsuRI GGCC 3 cut(s) 643, 832, 1004
BtgI CCRYGG 1 cut(s) 499
BtgZI GCGATG 1 cut(s) 382
BtsCI GGATG 4 cut(s) 313, 346, 931, 963
BtsIMutI CAGTG 1 cut(s) 275
BveI ACCTGC 1 cut(s) 197
Cac8I GCNNGC 3 cut(s) 587, 1056, 1479
CfoI GCGC 3 cut(s) 85, 256, 373
Cfr13I GGNCC 6 cut(s) 526, 830, 1003, 1033, 1323, 1343
CseI GACGC 2 cut(s) 385, 1440
CsiI ACCWGGT 1 cut(s) 822
Csp6I GTAC 3 cut(s) 358, 793, 966
CspCI CAANNNNNGTGG 2 cut(s) 175, 210
CviAII CATG 7 cut(s) 500, 553, 614, 953, 969, 1318, 1340
CviQI GTAC 3 cut(s) 358, 793, 966
DdeI CTNAG 1 cut(s) 651
DinI GGCGCC 1 cut(s) 372
DpnI GATC 8 cut(s) 312, 804, 810, 840, 951, 1083, 1206, 1447
DpnII GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
DraIII CACNNNGTG 1 cut(s) 523
DrdI GACNNNNNNGTC 1 cut(s) 127
DriI GACNNNNNGTC 1 cut(s) 61
DseDI GACNNNNNNGTC 1 cut(s) 127
EaeI YGGCCR 1 cut(s) 641
Eam1104I CTCTTC 2 cut(s) 414, 1230
Eam1105I GACNNNNNGTC 1 cut(s) 61
EarI CTCTTC 2 cut(s) 414, 1230
EciI GGCGGA 4 cut(s) 100, 193, 377, 431
Eco130I CCWWGG 2 cut(s) 499, 1007
Eco24I GRGCYC 1 cut(s) 74
Eco47I GGWCC 4 cut(s) 526, 1033, 1323, 1343
Eco57I CTGAAG 2 cut(s) 873, 1056
Eco88I CYCGRG 1 cut(s) 291
Eco91I GGTNACC 1 cut(s) 818
EcoNI CCTNNNNNAGG 1 cut(s) 1221
EcoO65I GGTNACC 1 cut(s) 818
EcoRII CCWGG 1 cut(s) 822
EcoT14I CCWWGG 2 cut(s) 499, 1007
EcoT38I GRGCYC 1 cut(s) 74
EgeI GGCGCC 1 cut(s) 372
EheI GGCGCC 1 cut(s) 372
ErhI CCWWGG 2 cut(s) 499, 1007
Esp3I CGTCTC 1 cut(s) 593
FaeI CATG 7 cut(s) 503, 556, 617, 956, 972, 1321, 1343
FaqI GGGAC 1 cut(s) 421
FatI CATG 7 cut(s) 499, 552, 613, 952, 968, 1317, 1339
FauI CCCGC 1 cut(s) 537
FbaI TGATCA 1 cut(s) 949
FblI GTMKAC 2 cut(s) 261, 510
Fnu4HI GCNGC 7 cut(s) 81, 86, 207, 391, 590, 627, 1197
FokI GGATG 4 cut(s) 300, 353, 938, 970
FriOI GRGCYC 1 cut(s) 74
Fsp4HI GCNGC 7 cut(s) 81, 86, 207, 391, 590, 627, 1197
FspBI CTAG 3 cut(s) 762, 1179, 1374
GlaI GCGC 3 cut(s) 84, 255, 372
GluI GCNGC 7 cut(s) 81, 86, 207, 391, 590, 627, 1197
GsaI CCCAGC 1 cut(s) 153
HaeII RGCGCY 2 cut(s) 86, 374
HaeIII GGCC 3 cut(s) 643, 832, 1004
HapII CCGG 3 cut(s) 317, 434, 644
HgaI GACGC 2 cut(s) 385, 1440
HhaI GCGC 3 cut(s) 85, 256, 373
Hin1I GRCGYC 2 cut(s) 371, 377
Hin1II CATG 7 cut(s) 503, 556, 617, 956, 972, 1321, 1343
Hin6I GCGC 3 cut(s) 83, 254, 371
HinP1I GCGC 3 cut(s) 83, 254, 371
HincII GTYRAC 1 cut(s) 511
HindII GTYRAC 1 cut(s) 511
HindIII AAGCTT 1 cut(s) 686
HpaII CCGG 3 cut(s) 317, 434, 644
HphI GGTGA 5 cut(s) 175, 234, 541, 812, 959
Hpy166II GTNNAC 6 cut(s) 262, 511, 526, 1067, 1289, 1390
Hpy188I TCNGA 7 cut(s) 10, 36, 42, 120, 340, 450, 652
Hpy188III TCNNGA 2 cut(s) 806, 842
Hpy8I GTNNAC 6 cut(s) 262, 511, 526, 1067, 1289, 1390
Hpy99I CGWCG 2 cut(s) 53, 379
HpyAV CCTTC 8 cut(s) 147, 220, 226, 556, 616, 890, 1080, 1106
HpyCH4III ACNGT 3 cut(s) 160, 604, 1295
HpyCH4V TGCA 3 cut(s) 697, 1196, 1289
HpyF10VI GCNNNNNNNGC 4 cut(s) 203, 212, 586, 694
HpyF3I CTNAG 1 cut(s) 651
Hsp92I GRCGYC 2 cut(s) 371, 377
Hsp92II CATG 7 cut(s) 503, 556, 617, 956, 972, 1321, 1343
HspAI GCGC 3 cut(s) 83, 254, 371
KasI GGCGCC 1 cut(s) 370
KpnI GGTACC 1 cut(s) 361
Ksp22I TGATCA 1 cut(s) 949
Kzo9I GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
LmnI GCTCC 5 cut(s) 69, 1171, 1191, 1438, 1486
Lsp1109I GCAGC 3 cut(s) 72, 613, 1208
LweI GCATC 1 cut(s) 724
MabI ACCWGGT 1 cut(s) 822
MaeI CTAG 3 cut(s) 762, 1179, 1374
MaeIII GTNAC 6 cut(s) 273, 475, 818, 928, 1038, 1405
MalI GATC 8 cut(s) 312, 804, 810, 840, 951, 1083, 1206, 1447
MboI GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
MboII GAAGA 8 cut(s) 65, 123, 157, 223, 431, 1114, 1156, 1247
MfeI CAATTG 1 cut(s) 471
MflI RGATCY 2 cut(s) 802, 1445
MhlI GDGCHC 3 cut(s) 74, 1291, 1435
Mly113I GGCGCC 1 cut(s) 371
MlyI GAGTC 6 cut(s) 10, 50, 275, 551, 575, 781
MmeI TCCRAC 4 cut(s) 65, 143, 261, 467
MseI TTAA 4 cut(s) 660, 992, 1164, 1245
MslI CAYNNNNRTG 1 cut(s) 1296
MspA1I CMGCKG 1 cut(s) 592
MspCI CTTAAG 1 cut(s) 1163
MspI CCGG 3 cut(s) 317, 434, 644
MspR9I CCNGG 2 cut(s) 645, 824
MunI CAATTG 1 cut(s) 471
MvaI CCWGG 1 cut(s) 824
MvnI CGCG 3 cut(s) 61, 67, 254
MwoI GCNNNNNNNGC 4 cut(s) 203, 212, 586, 694
NarI GGCGCC 1 cut(s) 371
NciI CCSGG 1 cut(s) 645
NcoI CCATGG 1 cut(s) 499
NdeII GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
NlaIII CATG 7 cut(s) 503, 556, 617, 956, 972, 1321, 1343
NlaIV GGNNCC 9 cut(s) 71, 359, 372, 528, 804, 1005, 1034, 1187, 1371
NmeAIII GCCGAG 1 cut(s) 561
NmuCI GTSAC 5 cut(s) 273, 475, 818, 1038, 1405
NspI RCATGY 1 cut(s) 972
NspV TTCGAA 1 cut(s) 720
PaeR7I CTCGAG 1 cut(s) 291
PaqCI CACCTGC 1 cut(s) 197
PcsI WCGNNNNNNNCGW 2 cut(s) 804, 834
PfeI GAWTC 5 cut(s) 37, 351, 430, 610, 1414
PflMI CCANNNNNTGG 2 cut(s) 523, 576
PkrI GCNGC 7 cut(s) 82, 87, 208, 392, 591, 628, 1198
Ple19I CGATCG 1 cut(s) 841
PleI GAGTC 6 cut(s) 10, 50, 274, 550, 574, 781
PluTI GGCGCC 1 cut(s) 374
PpsI GAGTC 6 cut(s) 10, 50, 274, 550, 574, 781
Psp6I CCWGG 1 cut(s) 822
PspEI GGTNACC 1 cut(s) 818
PspFI CCCAGC 1 cut(s) 149
PspGI CCWGG 1 cut(s) 822
PspN4I GGNNCC 9 cut(s) 71, 359, 372, 528, 804, 1005, 1034, 1187, 1371
PspPI GGNCC 6 cut(s) 526, 830, 1003, 1033, 1323, 1343
PspXI VCTCGAGB 1 cut(s) 291
PsuI RGATCY 2 cut(s) 802, 1445
PvuI CGATCG 1 cut(s) 841
RsaI GTAC 3 cut(s) 359, 794, 967
RsaNI GTAC 3 cut(s) 358, 793, 966
RseI CAYNNNNRTG 1 cut(s) 1296
SalI GTCGAC 1 cut(s) 509
SaqAI TTAA 4 cut(s) 660, 992, 1164, 1245
SatI GCNGC 7 cut(s) 81, 86, 207, 391, 590, 627, 1197
Sau3AI GATC 8 cut(s) 310, 802, 808, 838, 949, 1081, 1204, 1445
Sau96I GGNCC 6 cut(s) 526, 830, 1003, 1033, 1323, 1343
SchI GAGTC 6 cut(s) 10, 50, 275, 551, 575, 781
ScrFI CCNGG 2 cut(s) 645, 824
SduI GDGCHC 3 cut(s) 74, 1291, 1435
SexAI ACCWGGT 1 cut(s) 822
SfaNI GCATC 1 cut(s) 724
SfcI CTRYAG 1 cut(s) 1218
SfoI GGCGCC 1 cut(s) 372
Sfr274I CTCGAG 1 cut(s) 291
SfuI TTCGAA 1 cut(s) 720
SinI GGWCC 4 cut(s) 526, 1033, 1323, 1343
SlaI CTCGAG 1 cut(s) 291
SmiMI CAYNNNNRTG 1 cut(s) 1296
SmlI CTYRAG 2 cut(s) 291, 1163
SmoI CTYRAG 2 cut(s) 291, 1163
SspDI GGCGCC 1 cut(s) 370
SspI AATATT 1 cut(s) 1423
SspMI CTAG 3 cut(s) 762, 1179, 1374
StyD4I CCNGG 2 cut(s) 643, 822
StyI CCWWGG 2 cut(s) 499, 1007
TaaI ACNGT 3 cut(s) 160, 604, 1295
TaqI TCGA 8 cut(s) 292, 309, 349, 510, 720, 798, 921, 1207
TatI WGTACW 1 cut(s) 792
TauI GCSGC 4 cut(s) 83, 209, 393, 592
TfiI GAWTC 5 cut(s) 37, 351, 430, 610, 1414
Tru1I TTAA 4 cut(s) 660, 992, 1164, 1245
Tru9I TTAA 4 cut(s) 660, 992, 1164, 1245
TscAI CASTG 1 cut(s) 282
TseFI GTSAC 5 cut(s) 273, 475, 818, 1038, 1405
TseI GCWGC 3 cut(s) 85, 626, 1196
Tsp45I GTSAC 5 cut(s) 273, 475, 818, 1038, 1405
TspDTI ATGAA 3 cut(s) 157, 1121, 1125
TspGWI ACGGA 2 cut(s) 425, 1473
TspRI CASTG 1 cut(s) 282
Van91I CCANNNNNTGG 2 cut(s) 523, 576
Vha464I CTTAAG 1 cut(s) 1163
VneI GTGCAC 1 cut(s) 1287
VpaK11BI GGWCC 4 cut(s) 526, 1033, 1323, 1343
XagI CCTNNNNNAGG 1 cut(s) 1221
XapI RAATTY 3 cut(s) 771, 1017, 1147
XceI RCATGY 1 cut(s) 972
XhoI CTCGAG 1 cut(s) 291
XmiI GTMKAC 2 cut(s) 261, 510
XspI CTAG 3 cut(s) 762, 1179, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.