Prupe.7G211200_v2.0.a1

Ectonucleotide pyrophosphatase phosphodiesterase family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0006656
Physical Location & Seq
Forward (+)
19316856 .. 19319051
2196 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G211200.1

Sequence Viewer

Length: 1488 bp
ATGGGTTCGGATTCGTTGCCCATGAAACCCACACCGATCCCAACCCAAGATGAAGAGCTTCCAAACCCAGCTACGGCTCTGCTCTCTTTCAACACAGACTCATCCACCTCCTCACCTTCGACCTCATCCCCTTCTCACAAACCCAGCACCACCATCATCTTCATCTCTCTCTTGCTCATCACCTGCATAGCTCTCTCCGCTGCTATTGCTTTCGCTTTCCTCTTCTTCTCGTACCCATCAAAGGCCACAGCAACGCCCGCACACAACTCCACATCAGTCGAATCCAAGGCTCGGGTTTTAGCAAAACTTGACCATCCAGTGGTTCTATTAGTTTCCTCAGATGGCTTTCGATTCGGTTACCAATTCAAGACTCCGACGCCGAATATCGGTAGACTCATCGCCAATGGGACCGAGGCCGAGCAGGGTTTGATTCCTGTGTTCCCGACTCTAACATTTCCCAACCATTACTCAATTGTCACAGGTCTTTACCCTGCTTATCATGGAATAGTCAACAACCACTTTGTGGATCCGCACACAGGGGAGTTTTTCAACATGGGAAGCCACGAACCCAAGTGGTGGCTAGGTGAGCCCTTGTGGGAGACTGTGGTCAATCATGGTTTGAAGGCTGCCACTTATTTCTGGCCTGGTTCTGAGGTAAATAAAGGTTCTTGGACTTGCCCTGAAAAGCTTTGCATGCAGTATAATGGTTCTGTTCCTTTTGAGCAAAGGGTTGATACTGTTTTGAACTACTTTGATCTGCCTAGTAGTGAAATTCCTGCGTTTATGACTCTGTATTTTGAGGACCCTGATCATCAGGGTCACCAGGTTGGGCCTGATGATCCTGAGATTACTGAAGCTGTTGCTAGAATTGATAGGATGATTGGGAGGTTGATTGAAGGTTTAGAGAAAAGAGGGGTCTTTGAGGATGTTACTATAATTTTGGTGGGTGATCATGGGATGGTTGGTACTTGTGATAAAAAGCTAATTTACCTAGATGATTTGGCCTCTTGGATTGAAATTCCTGATAATTGGGTCCTGTCACATACTCCATTACTTGCTATTCGTCCGCCTTCAGGAATTGATCCTTCGAATGTTGTTGCTAAGATGAATGAAGGATTGAAATCAGGGAAAGTTGAGAATGGGAAGAATTTGAGAATGTATCTTAAGGAGGAGCTTCCTAGTAGGCTCCATTATGCAGCGAGTGATCGAATTCCGCCTATAATAGGGTTGGTTGAAGAGGGGTTTAAGATAGAACAAAAGAGGACGAAGCGGAGAGAATGTGGAGGATCACATGGTTATGACAATGCTGTATTTTCCATGAGAACCATATTCGTTGGGCATGGTCCTCAGTTTGCAAGAGGTCGTAAGGTTCCTAGTTTTGAAAATGTCCACATATACAACTTGGTCACTAAGATTCTTAATATTCAGGGTGCCCCTAACAATGGATCTTTATCATTTTCAAAGTCTGTTCTTTTGCCTAGTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002276 GO:0002366 GO:0002376 GO:0002682 GO:0002683 GO:0002684 GO:0002694 GO:0002695 GO:0002697 GO:0002698 GO:0002699 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004528 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006163 GO:0006220 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006955 GO:0008081 GO:0008150 GO:0008152 GO:0008270 GO:0008285 GO:0009056 GO:0009058 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009143 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009897 GO:0009986 GO:0009987 GO:0016020 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017144 GO:0018130 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0033003 GO:0033004 GO:0033006 GO:0033007 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0036230 GO:0042127 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045321 GO:0045575 GO:0046034 GO:0046434 GO:0046483 GO:0046700 GO:0046872 GO:0046914 GO:0047429 GO:0048471 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050727 GO:0050728 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0050865 GO:0050866 GO:0050896 GO:0055086 GO:0065007 GO:0070663 GO:0070664 GO:0070666 GO:0070667 GO:0071704 GO:0071944 GO:0072521 GO:0072527 GO:0080134 GO:0090304 GO:0090305 GO:0098552 GO:1901135 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko00500 ko00740 ko00760 ko00770 ko01100 map00230 map00240 map00500 map00740 map00760 map00770 map01100
Pfam Domains
Protein Families
Phosphodiest

Protein Analysis

496

Amino Acids

54.58

Weight (kDa)

6.02

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 191
Acc36I ACCTGC 1 cut(s) 191
AccB1I GGYRCC 1 cut(s) 1430
AccB7I CCANNNNNTGG 3 cut(s) 319, 523, 576
AccI GTMKAC 1 cut(s) 391
AciI CCGC 6 cut(s) 198, 258, 530, 1067, 1214, 1270
AclWI GGATC 7 cut(s) 31, 521, 534, 833, 1076, 1294, 1453
AcsI RAATTY 4 cut(s) 771, 1017, 1147, 1209
AcuI CTGAAG 2 cut(s) 873, 1056
AcyI GRCGYC 1 cut(s) 377
AdeI CACNNNGTG 1 cut(s) 523
AfaI GTAC 2 cut(s) 233, 967
AflII CTTAAG 1 cut(s) 1163
AjnI CCWGG 2 cut(s) 643, 822
AluBI AGCT 7 cut(s) 58, 71, 191, 688, 857, 982, 1174
AluI AGCT 7 cut(s) 58, 71, 191, 688, 857, 982, 1174
Alw26I GTCTC 1 cut(s) 593
AlwI GGATC 7 cut(s) 31, 521, 534, 833, 1076, 1294, 1453
Ama87I CYCGRG 1 cut(s) 291
AoxI GGCC 5 cut(s) 243, 414, 641, 830, 1002
ApeKI GCWGC 3 cut(s) 200, 626, 1196
ApoI RAATTY 4 cut(s) 771, 1017, 1147, 1209
Asp700I GAANNNNTTC 1 cut(s) 57
AspS9I GGNCC 5 cut(s) 408, 802, 830, 1033, 1343
AsuHPI GGTGA 5 cut(s) 105, 172, 596, 812, 959
AsuII TTCGAA 1 cut(s) 1088
AvaI CYCGRG 1 cut(s) 291
AvaII GGWCC 4 cut(s) 408, 802, 1033, 1343
BaeGI GKGCMC 1 cut(s) 1435
BamHI GGATCC 1 cut(s) 526
BanI GGYRCC 1 cut(s) 1430
BanII GRGCYC 1 cut(s) 591
BbvI GCAGC 3 cut(s) 187, 613, 1208
BccI CCATC 5 cut(s) 161, 244, 321, 335, 952
BceAI ACGGC 1 cut(s) 90
BciT130I CCWGG 2 cut(s) 645, 824
BclI TGATCA 2 cut(s) 808, 949
BcoDI GTCTC 1 cut(s) 593
BfaI CTAG 7 cut(s) 581, 762, 864, 992, 1179, 1374, 1479
BfrI CTTAAG 1 cut(s) 1163
BfuAI ACCTGC 1 cut(s) 191
BisI GCNGC 3 cut(s) 201, 627, 1197
BlsI GCNGC 3 cut(s) 202, 628, 1198
Bme1390I CCNGG 2 cut(s) 645, 824
Bme18I GGWCC 4 cut(s) 408, 802, 1033, 1343
BmeT110I CYCGRG 1 cut(s) 291
BmgT120I GGNCC 5 cut(s) 408, 802, 830, 1033, 1343
BmiI GGNNCC 7 cut(s) 409, 528, 804, 1034, 1187, 1371, 1432
BmrFI CCNGG 2 cut(s) 645, 824
BoxI GACNNNNGTC 1 cut(s) 605
Bpu14I TTCGAA 1 cut(s) 1088
BsaBI GATNNNNATC 2 cut(s) 1120, 1450
BsaHI GRCGYC 1 cut(s) 377
BsaJI CCNNGG 2 cut(s) 285, 411
BsaXI ACNNNNNCTCC 2 cut(s) 1264, 1294
Bse1I ACTGG 1 cut(s) 317
Bse8I GATNNNNATC 2 cut(s) 1120, 1450
BseBI CCWGG 2 cut(s) 645, 824
BseDI CCNNGG 2 cut(s) 285, 411
BseGI GGATG 6 cut(s) 101, 125, 313, 882, 931, 963
BseJI GATNNNNATC 2 cut(s) 1120, 1450
BseMII CTCAG 4 cut(s) 351, 642, 834, 1361
BseNI ACTGG 1 cut(s) 317
BseRI GAGGAG 2 cut(s) 100, 1184
BseSI GKGCMC 1 cut(s) 1435
BseXI GCAGC 3 cut(s) 187, 613, 1208
BseYI CCCAGC 2 cut(s) 67, 143
BshFI GGCC 5 cut(s) 245, 416, 643, 832, 1004
BshNI GGYRCC 1 cut(s) 1430
BsiHKCI CYCGRG 1 cut(s) 291
BslFI GGGAC 1 cut(s) 421
BsmAI GTCTC 1 cut(s) 593
BsmFI GGGAC 1 cut(s) 421
BsnI GGCC 5 cut(s) 245, 416, 643, 832, 1004
BsoBI CYCGRG 1 cut(s) 291
Bsp119I TTCGAA 1 cut(s) 1088
Bsp1286I GDGCHC 2 cut(s) 591, 1435
BspACI CCGC 6 cut(s) 198, 258, 530, 1067, 1214, 1270
BspANI GGCC 5 cut(s) 245, 416, 643, 832, 1004
BspCNI CTCAG 4 cut(s) 350, 643, 835, 1360
BspLI GGNNCC 7 cut(s) 409, 528, 804, 1034, 1187, 1371, 1432
BspMI ACCTGC 1 cut(s) 191
BspPI GGATC 7 cut(s) 31, 521, 534, 833, 1076, 1294, 1453
BspQI GCTCTTC 1 cut(s) 48
BspT104I TTCGAA 1 cut(s) 1088
BspT107I GGYRCC 1 cut(s) 1430
BspTI CTTAAG 1 cut(s) 1163
BsrI ACTGG 1 cut(s) 317
BssECI CCNNGG 2 cut(s) 285, 411
BssNI GRCGYC 1 cut(s) 377
BssT1I CCWWGG 1 cut(s) 285
Bst2UI CCWGG 2 cut(s) 645, 824
Bst4CI ACNGT 2 cut(s) 604, 739
Bst6I CTCTTC 3 cut(s) 48, 227, 1230
BstACI GRCGYC 1 cut(s) 377
BstAFI CTTAAG 1 cut(s) 1163
BstBI TTCGAA 1 cut(s) 1088
BstC8I GCNNGC 2 cut(s) 258, 695
BstDEI CTNAG 7 cut(s) 337, 651, 843, 1101, 1347, 1410, 1485
BstEII GGTNACC 2 cut(s) 356, 818
BstENI CCTNNNNNAGG 1 cut(s) 1221
BstF5I GGATG 6 cut(s) 101, 125, 313, 882, 931, 963
BstMAI GTCTC 1 cut(s) 593
BstMWI GCNNNNNNNGC 5 cut(s) 197, 206, 257, 586, 694
BstNI CCWGG 2 cut(s) 645, 824
BstNSI RCATGY 1 cut(s) 697
BstPAI GACNNNNGTC 1 cut(s) 605
BstPI GGTNACC 2 cut(s) 356, 818
BstSCI CCNGG 2 cut(s) 643, 822
BstSLI GKGCMC 1 cut(s) 1435
BstV1I GCAGC 3 cut(s) 187, 613, 1208
BstX2I RGATCY 2 cut(s) 526, 1445
BstYI RGATCY 2 cut(s) 526, 1445
BsuRI GGCC 5 cut(s) 245, 416, 643, 832, 1004
BtgZI GCGATG 1 cut(s) 382
BtsCI GGATG 6 cut(s) 101, 125, 313, 882, 931, 963
BtsIMutI CAGTG 1 cut(s) 324
BveI ACCTGC 1 cut(s) 191
Cac8I GCNNGC 2 cut(s) 258, 695
Cfr13I GGNCC 5 cut(s) 408, 802, 830, 1033, 1343
CseI GACGC 1 cut(s) 385
CsiI ACCWGGT 1 cut(s) 822
Csp6I GTAC 2 cut(s) 232, 966
CviAII CATG 9 cut(s) 22, 500, 553, 614, 694, 953, 1292, 1318, 1340
CviQI GTAC 2 cut(s) 232, 966
DdeI CTNAG 7 cut(s) 337, 651, 843, 1101, 1347, 1410, 1485
DraIII CACNNNGTG 1 cut(s) 523
Eam1104I CTCTTC 3 cut(s) 48, 227, 1230
EarI CTCTTC 3 cut(s) 48, 227, 1230
EciI GGCGGA 2 cut(s) 1056, 1203
Eco130I CCWWGG 1 cut(s) 285
Eco24I GRGCYC 1 cut(s) 591
Eco47I GGWCC 4 cut(s) 408, 802, 1033, 1343
Eco57I CTGAAG 2 cut(s) 873, 1056
Eco88I CYCGRG 1 cut(s) 291
Eco91I GGTNACC 2 cut(s) 356, 818
EcoNI CCTNNNNNAGG 1 cut(s) 1221
EcoO109I RGGNCCY 2 cut(s) 802, 1033
EcoO65I GGTNACC 2 cut(s) 356, 818
EcoRI GAATTC 1 cut(s) 1209
EcoRII CCWGG 2 cut(s) 643, 822
EcoT14I CCWWGG 1 cut(s) 285
EcoT38I GRGCYC 1 cut(s) 591
ErhI CCWWGG 1 cut(s) 285
FaeI CATG 9 cut(s) 25, 503, 556, 617, 697, 956, 1295, 1321, 1343
FaqI GGGAC 1 cut(s) 421
FatI CATG 9 cut(s) 21, 499, 552, 613, 693, 952, 1291, 1317, 1339
FauI CCCGC 1 cut(s) 265
FbaI TGATCA 2 cut(s) 808, 949
FblI GTMKAC 1 cut(s) 391
Fnu4HI GCNGC 3 cut(s) 201, 627, 1197
FokI GGATG 6 cut(s) 88, 112, 300, 889, 938, 970
FriOI GRGCYC 1 cut(s) 591
Fsp4HI GCNGC 3 cut(s) 201, 627, 1197
FspBI CTAG 7 cut(s) 581, 762, 864, 992, 1179, 1374, 1479
GluI GCNGC 3 cut(s) 201, 627, 1197
GsaI CCCAGC 2 cut(s) 71, 147
HaeIII GGCC 5 cut(s) 245, 416, 643, 832, 1004
HgaI GACGC 1 cut(s) 385
Hin1I GRCGYC 1 cut(s) 377
Hin1II CATG 9 cut(s) 25, 503, 556, 617, 697, 956, 1295, 1321, 1343
HincII GTYRAC 1 cut(s) 511
HindII GTYRAC 1 cut(s) 511
HindIII AAGCTT 1 cut(s) 686
HphI GGTGA 5 cut(s) 105, 172, 596, 812, 959
Hpy166II GTNNAC 3 cut(s) 392, 511, 1390
Hpy188I TCNGA 4 cut(s) 10, 340, 375, 652
Hpy188III TCNNGA 5 cut(s) 367, 442, 842, 1022, 1074
Hpy8I GTNNAC 3 cut(s) 392, 511, 1390
Hpy99I CGWCG 1 cut(s) 379
HpyAV CCTTC 7 cut(s) 126, 141, 616, 890, 1080, 1095, 1106
HpyCH4III ACNGT 2 cut(s) 604, 739
HpyCH4V TGCA 5 cut(s) 186, 693, 697, 1196, 1355
HpyF10VI GCNNNNNNNGC 5 cut(s) 197, 206, 257, 586, 694
HpyF3I CTNAG 7 cut(s) 337, 651, 843, 1101, 1347, 1410, 1485
Hsp92I GRCGYC 1 cut(s) 377
Hsp92II CATG 9 cut(s) 25, 503, 556, 617, 697, 956, 1295, 1321, 1343
Ksp22I TGATCA 2 cut(s) 808, 949
LguI GCTCTTC 1 cut(s) 48
LmnI GCTCC 2 cut(s) 1171, 1191
Lsp1109I GCAGC 3 cut(s) 187, 613, 1208
MabI ACCWGGT 1 cut(s) 822
MaeI CTAG 7 cut(s) 581, 762, 864, 992, 1179, 1374, 1479
MaeIII GTNAC 6 cut(s) 356, 475, 818, 928, 1038, 1405
MboII GAAGA 6 cut(s) 65, 151, 214, 217, 1156, 1247
MfeI CAATTG 1 cut(s) 471
MflI RGATCY 2 cut(s) 526, 1445
MhlI GDGCHC 2 cut(s) 591, 1435
MlyI GAGTC 5 cut(s) 92, 364, 387, 439, 781
MmeI TCCRAC 1 cut(s) 398
MroXI GAANNNNTTC 1 cut(s) 57
MseI TTAA 3 cut(s) 1164, 1245, 1419
MslI CAYNNNNRTG 1 cut(s) 1296
MspA1I CMGCKG 1 cut(s) 200
MspCI CTTAAG 1 cut(s) 1163
MspR9I CCNGG 2 cut(s) 645, 824
MunI CAATTG 1 cut(s) 471
MvaI CCWGG 2 cut(s) 645, 824
MwoI GCNNNNNNNGC 5 cut(s) 197, 206, 257, 586, 694
NlaIII CATG 9 cut(s) 25, 503, 556, 617, 697, 956, 1295, 1321, 1343
NlaIV GGNNCC 7 cut(s) 409, 528, 804, 1034, 1187, 1371, 1432
NmeAIII GCCGAG 1 cut(s) 442
NmuCI GTSAC 4 cut(s) 475, 818, 1038, 1405
NspI RCATGY 1 cut(s) 697
NspV TTCGAA 1 cut(s) 1088
PaeI GCATGC 1 cut(s) 697
PaqCI CACCTGC 1 cut(s) 191
PciSI GCTCTTC 1 cut(s) 48
PdmI GAANNNNTTC 1 cut(s) 57
PfeI GAWTC 5 cut(s) 11, 281, 351, 430, 1414
PflMI CCANNNNNTGG 3 cut(s) 319, 523, 576
PkrI GCNGC 3 cut(s) 202, 628, 1198
PleI GAGTC 5 cut(s) 92, 364, 387, 439, 781
PpsI GAGTC 5 cut(s) 92, 364, 387, 439, 781
PpuMI RGGWCCY 2 cut(s) 802, 1033
PshAI GACNNNNGTC 1 cut(s) 605
Psp5II RGGWCCY 2 cut(s) 802, 1033
Psp6I CCWGG 2 cut(s) 643, 822
PspEI GGTNACC 2 cut(s) 356, 818
PspFI CCCAGC 2 cut(s) 67, 143
PspGI CCWGG 2 cut(s) 643, 822
PspN4I GGNNCC 7 cut(s) 409, 528, 804, 1034, 1187, 1371, 1432
PspPI GGNCC 5 cut(s) 408, 802, 830, 1033, 1343
PspPPI RGGWCCY 2 cut(s) 802, 1033
PsuI RGATCY 2 cut(s) 526, 1445
RsaI GTAC 2 cut(s) 233, 967
RsaNI GTAC 2 cut(s) 232, 966
RseI CAYNNNNRTG 1 cut(s) 1296
SapI GCTCTTC 1 cut(s) 48
SaqAI TTAA 3 cut(s) 1164, 1245, 1419
SatI GCNGC 3 cut(s) 201, 627, 1197
Sau96I GGNCC 5 cut(s) 408, 802, 830, 1033, 1343
SchI GAGTC 5 cut(s) 92, 364, 387, 439, 781
ScrFI CCNGG 2 cut(s) 645, 824
SduI GDGCHC 2 cut(s) 591, 1435
SexAI ACCWGGT 1 cut(s) 822
SfuI TTCGAA 1 cut(s) 1088
SinI GGWCC 4 cut(s) 408, 802, 1033, 1343
SmiMI CAYNNNNRTG 1 cut(s) 1296
SmlI CTYRAG 1 cut(s) 1163
SmoI CTYRAG 1 cut(s) 1163
SphI GCATGC 1 cut(s) 697
SsiI CCGC 6 cut(s) 198, 258, 530, 1067, 1214, 1270
SspI AATATT 1 cut(s) 1423
SspMI CTAG 7 cut(s) 581, 762, 864, 992, 1179, 1374, 1479
StyD4I CCNGG 2 cut(s) 643, 822
StyI CCWWGG 1 cut(s) 285
TaaI ACNGT 2 cut(s) 604, 739
TaqI TCGA 5 cut(s) 119, 279, 349, 1088, 1207
TaqII GACCGA 1 cut(s) 425
TfiI GAWTC 5 cut(s) 11, 281, 351, 430, 1414
Tru1I TTAA 3 cut(s) 1164, 1245, 1419
Tru9I TTAA 3 cut(s) 1164, 1245, 1419
TscAI CASTG 1 cut(s) 324
TseFI GTSAC 4 cut(s) 475, 818, 1038, 1405
TseI GCWGC 3 cut(s) 200, 626, 1196
Tsp45I GTSAC 4 cut(s) 475, 818, 1038, 1405
TspDTI ATGAA 5 cut(s) 38, 66, 151, 1121, 1125
TspRI CASTG 1 cut(s) 324
Van91I CCANNNNNTGG 3 cut(s) 319, 523, 576
Vha464I CTTAAG 1 cut(s) 1163
VpaK11BI GGWCC 4 cut(s) 408, 802, 1033, 1343
XagI CCTNNNNNAGG 1 cut(s) 1221
XapI RAATTY 4 cut(s) 771, 1017, 1147, 1209
XceI RCATGY 1 cut(s) 697
XmiI GTMKAC 1 cut(s) 391
XmnI GAANNNNTTC 1 cut(s) 57
XspI CTAG 7 cut(s) 581, 762, 864, 992, 1179, 1374, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.