Rroxscaffold_2G00148430

Ectonucleotide pyrophosphatase phosphodiesterase family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0006656
Physical Location & Seq
Forward (+)
86143591 .. 86145063
1473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00148430.1

Sequence Viewer

Length: 1473 bp
ATGGGTTCCGATACATTACCCATGAAACCCTCCCCGATTCCGACCCAGGACGATGACCCACCAAACCCATCTGCGGCTCTGCTCTCCTTCAACACAGACTCGACCTCTTCAACTTCAACCCCTTCTCACAGACCCACCATCATCTTCATCTCGCTATTACTCATCACCTGCATAGCTCTCTCTGCTGCTGCAGCTTTCGCTTTCCTCTTCTTCTCGAACCCATCAAACACCACCACCACACCCACCTCCACCACCACTTCAATGGACTCAAAGGCTCGGCCTTTAGCCAAGTTGAACCATCCGGTGGTGATCTTGGTCTCCTCAGATGGGTTTAGATTTGGTTACCAATTCAAGACCCCAACTCCAAATATTCATCGTCTCATAGCAAATGGGACTGAAGCCGAAACGGGTCTGATTCCGGTCTTCCCAACTCTTACTTTTCCTAATCACTACTCTATTGTCACAGGTCTTTACCCAGCTCACCATGGAATCGTCAACAACCACTTTGTGGATCCCTACACTGGGGAGTTCTTCAATATGGGAAGCCATGAGCCCAAGTGGTGGCTCGGCGAGCCGCTGTGGGAGACTGTGGTGAACCATGGTTTGAAGGCTGCTACGTATTTCTGGCCGGGTGCTGAGGTAAAGAAAGGTTCTTGGACTTGCCCTGAAAAGTATTGTCAACAATATAATGGTTCTGTTCCTTTTGAGGAGCGGGTTGATACTACTCTAGGGTTCTTTGATTTGCCTAGTAGTGAGATTCCTTATTTTATGACACTATATTTTGAGGACCCTGATCATCAGGGCCACCAGGTTGGGCCTGATGATCCCGAGATTACTGAGGCTGTTGCCAACATTGATAGGATGATTGGGAGGTTGATTGAGGGTTTGGAGAAAAGAGGGGTTTTCGAGGATGTGACGATTATTATGGTGGGTGATCATGGGATGGTTGGTACTTGTGATAAGAAGTTGATTTTCCTGGAGGATCTGGCCTCTTGGATTGAAATTCCGGCGAGTTGGGTCCAGTCGTATACTCCATTGCTTGCAATTCGTCCGCCCGCAGGAGTTGATACTGCGGATGTCGTGGCTAAGATGAATGAAGGTTTGAGTTCGGGGAAGGTTAAGAATGGGAAGCGATTGAAAATGTATCTCAAGGAGAAGCTTCCTAGGCGGTTACATTATGCAGCTAGTGATCGAATTCCTCCTGTTATAGGGTTGGTCGAAGAGGGGTTTAAGGTAGAACAGAAGATCTCAAAGAGGCAAGAATGTGGAGGAGCACATGGTTATGATAATGCTGTGTTTTCCATGAGGACGATATTCATTGGCCATGGTCCTCAGTTTGCAAGAGGGCGCAAGGTTCCTAGTTTTGAAAATGTCCAGATATACAACTTGGTCACTAAGATTCTCAATATCCAGGGTGCACCTAACAATGGATCTGAATCATTTCCAAAGTCTATTCTTTTGCCTAGTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002276 GO:0002366 GO:0002376 GO:0002682 GO:0002683 GO:0002684 GO:0002694 GO:0002695 GO:0002697 GO:0002698 GO:0002699 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004528 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006163 GO:0006220 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006955 GO:0008081 GO:0008150 GO:0008152 GO:0008270 GO:0008285 GO:0009056 GO:0009058 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009143 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009897 GO:0009986 GO:0009987 GO:0016020 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017144 GO:0018130 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0033003 GO:0033004 GO:0033006 GO:0033007 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0036230 GO:0042127 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045321 GO:0045575 GO:0046034 GO:0046434 GO:0046483 GO:0046700 GO:0046872 GO:0046914 GO:0047429 GO:0048471 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050727 GO:0050728 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0050865 GO:0050866 GO:0050896 GO:0055086 GO:0065007 GO:0070663 GO:0070664 GO:0070666 GO:0070667 GO:0071704 GO:0071944 GO:0072521 GO:0072527 GO:0080134 GO:0090304 GO:0090305 GO:0098552 GO:1901135 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko00500 ko00740 ko00760 ko00770 ko01100 map00230 map00240 map00500 map00740 map00760 map00770 map01100
Pfam Domains
Protein Families
Phosphodiest

Protein Analysis

490

Amino Acids

54.03

Weight (kDa)

6.02

Isoelectric Point (pI)

36.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphodiest PF01663 103 - 429 1.7e-110 Type I phosphodiesterase / nucleotide pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 176
Acc36I ACCTGC 1 cut(s) 176
AccB7I CCANNNNNTGG 3 cut(s) 304, 508, 561
AccBSI CCGCTC 1 cut(s) 712
AccI GTMKAC 1 cut(s) 1028
AciI CCGC 7 cut(s) 74, 575, 712, 1052, 1056, 1073, 1168
AclWI GGATC 5 cut(s) 506, 519, 818, 990, 1438
AcoI YGGCCR 2 cut(s) 626, 1321
AcsI RAATTY 2 cut(s) 1002, 1194
AcuI CTGAAG 1 cut(s) 417
AdeI CACNNNGTG 1 cut(s) 508
AfaI GTAC 1 cut(s) 952
AjnI CCWGG 4 cut(s) 45, 807, 975, 1410
AluBI AGCT 5 cut(s) 176, 194, 479, 1159, 1184
AluI AGCT 5 cut(s) 176, 194, 479, 1159, 1184
Alw21I GWGCWC 2 cut(s) 1276, 1420
Alw26I GTCTC 3 cut(s) 322, 383, 578
Alw44I GTGCAC 1 cut(s) 1416
AlwI GGATC 5 cut(s) 506, 519, 818, 990, 1438
Ama87I CYCGRG 1 cut(s) 827
AoxI GGCC 6 cut(s) 278, 626, 802, 815, 987, 1321
ApaLI GTGCAC 1 cut(s) 1416
ApeKI GCWGC 5 cut(s) 185, 188, 191, 611, 1181
ApoI RAATTY 2 cut(s) 1002, 1194
Asp700I GAANNNNTTC 1 cut(s) 1440
AspA2I CCTAGG 1 cut(s) 1163
AspLEI GCGC 1 cut(s) 1350
AspS9I GGNCC 5 cut(s) 787, 802, 815, 1018, 1328
AsuC2I CCSGG 1 cut(s) 630
AsuHPI GGTGA 5 cut(s) 157, 319, 473, 604, 944
AvaI CYCGRG 1 cut(s) 827
AvaII GGWCC 3 cut(s) 787, 1018, 1328
AvrII CCTAGG 1 cut(s) 1163
BaeGI GKGCMC 1 cut(s) 1420
BalI TGGCCA 1 cut(s) 1323
BamHI GGATCC 1 cut(s) 511
BanII GRGCYC 1 cut(s) 555
BbsI GAAGAC 1 cut(s) 415
Bbv12I GWGCWC 2 cut(s) 1276, 1420
BbvCI CCTCAGC 1 cut(s) 636
BbvI GCAGC 5 cut(s) 172, 175, 203, 598, 1193
BccI CCATC 6 cut(s) 76, 146, 229, 306, 320, 937
BciT130I CCWGG 4 cut(s) 47, 809, 977, 1412
BclI TGATCA 2 cut(s) 793, 934
BcnI CCSGG 1 cut(s) 630
BcoDI GTCTC 3 cut(s) 322, 383, 578
BfaI CTAG 6 cut(s) 728, 747, 1164, 1185, 1359, 1464
BfmI CTRYAG 1 cut(s) 189
BfuAI ACCTGC 1 cut(s) 176
BglII AGATCT 1 cut(s) 1245
BisI GCNGC 7 cut(s) 75, 186, 189, 192, 575, 612, 1182
BlnI CCTAGG 1 cut(s) 1163
BlsI GCNGC 7 cut(s) 76, 187, 190, 193, 576, 613, 1183
Bme1390I CCNGG 5 cut(s) 47, 630, 809, 977, 1412
Bme18I GGWCC 3 cut(s) 787, 1018, 1328
BmeT110I CYCGRG 1 cut(s) 827
BmgT120I GGNCC 5 cut(s) 787, 802, 815, 1018, 1328
BmiI GGNNCC 5 cut(s) 7, 513, 789, 1019, 1356
BmrFI CCNGG 5 cut(s) 47, 630, 809, 977, 1412
BmrI ACTGGG 1 cut(s) 531
BmuI ACTGGG 1 cut(s) 531
BpiI GAAGAC 1 cut(s) 415
BpmI CTGGAG 1 cut(s) 998
Bpu10I CCTNAGC 1 cut(s) 636
BpuEI CTTGAG 1 cut(s) 1133
BpuMI CCSGG 1 cut(s) 630
BsaAI YACGTR 1 cut(s) 618
BsaBI GATNNNNATC 1 cut(s) 1435
BsaI GGTCTC 1 cut(s) 322
BsaJI CCNNGG 6 cut(s) 45, 484, 598, 1163, 1324, 1411
BsaWI WCCGGW 2 cut(s) 301, 418
BsaXI ACNNNNNCTCC 2 cut(s) 346, 376
Bse1I ACTGG 2 cut(s) 526, 1021
Bse3DI GCAATG 1 cut(s) 1034
Bse8I GATNNNNATC 1 cut(s) 1435
BseBI CCWGG 4 cut(s) 47, 809, 977, 1412
BseDI CCNNGG 6 cut(s) 45, 484, 598, 1163, 1324, 1411
BseGI GGATG 5 cut(s) 298, 867, 916, 948, 1081
BseJI GATNNNNATC 1 cut(s) 1435
BseMI GCAATG 1 cut(s) 1034
BseMII CTCAG 4 cut(s) 336, 627, 828, 1346
BseNI ACTGG 2 cut(s) 526, 1021
BseRI GAGGAG 3 cut(s) 310, 722, 1284
BseSI GKGCMC 1 cut(s) 1420
BseXI GCAGC 5 cut(s) 172, 175, 203, 598, 1193
BseYI CCCAGC 1 cut(s) 475
BshFI GGCC 6 cut(s) 280, 628, 804, 817, 989, 1323
BsiHKAI GWGCWC 2 cut(s) 1276, 1420
BsiHKCI CYCGRG 1 cut(s) 827
BsiSI CCGG 4 cut(s) 302, 419, 629, 1007
BslFI GGGAC 1 cut(s) 406
BsmAI GTCTC 3 cut(s) 322, 383, 578
BsmBI CGTCTC 1 cut(s) 383
BsmFI GGGAC 1 cut(s) 406
BsnI GGCC 6 cut(s) 280, 628, 804, 817, 989, 1323
Bso31I GGTCTC 1 cut(s) 322
BsoBI CYCGRG 1 cut(s) 827
Bsp1286I GDGCHC 3 cut(s) 555, 1276, 1420
Bsp143I GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
Bsp19I CCATGG 3 cut(s) 484, 598, 1324
BspACI CCGC 7 cut(s) 74, 575, 712, 1052, 1056, 1073, 1168
BspANI GGCC 6 cut(s) 280, 628, 804, 817, 989, 1323
BspCNI CTCAG 4 cut(s) 335, 628, 829, 1345
BspLI GGNNCC 5 cut(s) 7, 513, 789, 1019, 1356
BspMAI CTGCAG 1 cut(s) 193
BspMI ACCTGC 1 cut(s) 176
BspPI GGATC 5 cut(s) 506, 519, 818, 990, 1438
BspTNI GGTCTC 1 cut(s) 322
BsrBI CCGCTC 1 cut(s) 712
BsrDI GCAATG 1 cut(s) 1034
BsrI ACTGG 2 cut(s) 526, 1021
BssECI CCNNGG 6 cut(s) 45, 484, 598, 1163, 1324, 1411
BssMI GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
BssNAI GTATAC 1 cut(s) 1029
BssT1I CCWWGG 4 cut(s) 484, 598, 1163, 1324
Bst1107I GTATAC 1 cut(s) 1029
Bst2UI CCWGG 4 cut(s) 47, 809, 977, 1412
Bst4CI ACNGT 1 cut(s) 589
Bst6I CTCTTC 3 cut(s) 112, 212, 1215
BstBAI YACGTR 1 cut(s) 618
BstC8I GCNNGC 3 cut(s) 572, 1041, 1056
BstDEI CTNAG 7 cut(s) 322, 636, 837, 1086, 1332, 1395, 1470
BstDSI CCRYGG 3 cut(s) 484, 598, 1324
BstEII GGTNACC 1 cut(s) 341
BstENI CCTNNNNNAGG 1 cut(s) 1206
BstF5I GGATG 5 cut(s) 298, 867, 916, 948, 1081
BstHHI GCGC 1 cut(s) 1350
BstKTI GATC 9 cut(s) 312, 514, 796, 826, 937, 985, 1192, 1248, 1433
BstMAI GTCTC 3 cut(s) 322, 383, 578
BstMBI GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
BstMWI GCNNNNNNNGC 5 cut(s) 182, 191, 197, 571, 1165
BstNI CCWGG 4 cut(s) 47, 809, 977, 1412
BstPI GGTNACC 1 cut(s) 341
BstSCI CCNGG 5 cut(s) 45, 628, 807, 975, 1410
BstSFI CTRYAG 1 cut(s) 189
BstSLI GKGCMC 1 cut(s) 1420
BstSNI TACGTA 1 cut(s) 618
BstV1I GCAGC 5 cut(s) 172, 175, 203, 598, 1193
BstV2I GAAGAC 1 cut(s) 415
BstX2I RGATCY 4 cut(s) 511, 982, 1245, 1430
BstXI CCANNNNNNTGG 2 cut(s) 262, 812
BstYI RGATCY 4 cut(s) 511, 982, 1245, 1430
BstZ17I GTATAC 1 cut(s) 1029
BsuRI GGCC 6 cut(s) 280, 628, 804, 817, 989, 1323
BtgI CCRYGG 3 cut(s) 484, 598, 1324
BtsCI GGATG 5 cut(s) 298, 867, 916, 948, 1081
BtsIMutI CAGTG 1 cut(s) 519
BveI ACCTGC 1 cut(s) 176
Cac8I GCNNGC 3 cut(s) 572, 1041, 1056
CfoI GCGC 1 cut(s) 1350
Cfr13I GGNCC 5 cut(s) 787, 802, 815, 1018, 1328
CsiI ACCWGGT 1 cut(s) 807
Csp6I GTAC 1 cut(s) 951
CviAII CATG 8 cut(s) 22, 485, 548, 599, 938, 1277, 1303, 1325
CviQI GTAC 1 cut(s) 951
DdeI CTNAG 7 cut(s) 322, 636, 837, 1086, 1332, 1395, 1470
DpnI GATC 9 cut(s) 311, 513, 795, 825, 936, 984, 1191, 1247, 1432
DpnII GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
DraIII CACNNNGTG 1 cut(s) 508
EaeI YGGCCR 2 cut(s) 626, 1321
Eam1104I CTCTTC 3 cut(s) 112, 212, 1215
EarI CTCTTC 3 cut(s) 112, 212, 1215
EciI GGCGGA 1 cut(s) 1041
Eco105I TACGTA 1 cut(s) 618
Eco130I CCWWGG 4 cut(s) 484, 598, 1163, 1324
Eco24I GRGCYC 1 cut(s) 555
Eco31I GGTCTC 1 cut(s) 322
Eco47I GGWCC 3 cut(s) 787, 1018, 1328
Eco57I CTGAAG 1 cut(s) 417
Eco88I CYCGRG 1 cut(s) 827
Eco91I GGTNACC 1 cut(s) 341
EcoNI CCTNNNNNAGG 1 cut(s) 1206
EcoO109I RGGNCCY 1 cut(s) 787
EcoO65I GGTNACC 1 cut(s) 341
EcoRI GAATTC 1 cut(s) 1194
EcoRII CCWGG 4 cut(s) 45, 807, 975, 1410
EcoT14I CCWWGG 4 cut(s) 484, 598, 1163, 1324
EcoT38I GRGCYC 1 cut(s) 555
ErhI CCWWGG 4 cut(s) 484, 598, 1163, 1324
Esp3I CGTCTC 1 cut(s) 383
FaeI CATG 8 cut(s) 25, 488, 551, 602, 941, 1280, 1306, 1328
FaqI GGGAC 1 cut(s) 406
FatI CATG 8 cut(s) 21, 484, 547, 598, 937, 1276, 1302, 1324
FauI CCCGC 2 cut(s) 705, 1063
FbaI TGATCA 2 cut(s) 793, 934
FblI GTMKAC 1 cut(s) 1028
Fnu4HI GCNGC 7 cut(s) 75, 186, 189, 192, 575, 612, 1182
FokI GGATG 5 cut(s) 285, 874, 923, 955, 1088
FriOI GRGCYC 1 cut(s) 555
Fsp4HI GCNGC 7 cut(s) 75, 186, 189, 192, 575, 612, 1182
FspBI CTAG 6 cut(s) 728, 747, 1164, 1185, 1359, 1464
GlaI GCGC 1 cut(s) 1349
GluI GCNGC 7 cut(s) 75, 186, 189, 192, 575, 612, 1182
GsaI CCCAGC 1 cut(s) 479
GsuI CTGGAG 1 cut(s) 998
HaeIII GGCC 6 cut(s) 280, 628, 804, 817, 989, 1323
HapII CCGG 4 cut(s) 302, 419, 629, 1007
HhaI GCGC 1 cut(s) 1350
Hin1II CATG 8 cut(s) 25, 488, 551, 602, 941, 1280, 1306, 1328
Hin6I GCGC 1 cut(s) 1348
HinP1I GCGC 1 cut(s) 1348
HincII GTYRAC 2 cut(s) 496, 680
HindII GTYRAC 2 cut(s) 496, 680
HindIII AAGCTT 1 cut(s) 1157
HinfI GANTC 8 cut(s) 37, 98, 266, 415, 489, 757, 1399, 1436
HpaII CCGG 4 cut(s) 302, 419, 629, 1007
HphI GGTGA 5 cut(s) 157, 319, 473, 604, 944
Hpy166II GTNNAC 5 cut(s) 496, 595, 680, 1029, 1418
Hpy188I TCNGA 5 cut(s) 10, 42, 325, 414, 1435
Hpy188III TCNNGA 4 cut(s) 214, 352, 827, 1375
Hpy8I GTNNAC 5 cut(s) 496, 595, 680, 1029, 1418
HpyAV CCTTC 5 cut(s) 97, 132, 601, 1091, 1108
HpyCH4III ACNGT 1 cut(s) 589
HpyCH4IV ACGT 1 cut(s) 617
HpyCH4V TGCA 6 cut(s) 171, 191, 1043, 1181, 1340, 1418
HpyF10VI GCNNNNNNNGC 5 cut(s) 182, 191, 197, 571, 1165
HpyF3I CTNAG 7 cut(s) 322, 636, 837, 1086, 1332, 1395, 1470
HpySE526I ACGT 1 cut(s) 617
Hsp92II CATG 8 cut(s) 25, 488, 551, 602, 941, 1280, 1306, 1328
HspAI GCGC 1 cut(s) 1348
Ksp22I TGATCA 2 cut(s) 793, 934
Kzo9I GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
LmnI GCTCC 2 cut(s) 709, 1271
Lsp1109I GCAGC 5 cut(s) 172, 175, 203, 598, 1193
MabI ACCWGGT 1 cut(s) 807
MaeI CTAG 6 cut(s) 728, 747, 1164, 1185, 1359, 1464
MaeII ACGT 1 cut(s) 617
MaeIII GTNAC 5 cut(s) 341, 460, 913, 1170, 1390
MalI GATC 9 cut(s) 311, 513, 795, 825, 936, 984, 1191, 1247, 1432
MbiI CCGCTC 1 cut(s) 712
MboI GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
MboII GAAGA 8 cut(s) 99, 136, 199, 202, 415, 523, 1232, 1255
MflI RGATCY 4 cut(s) 511, 982, 1245, 1430
MhlI GDGCHC 3 cut(s) 555, 1276, 1420
MlsI TGGCCA 1 cut(s) 1323
MluCI AATT 4 cut(s) 347, 1002, 1044, 1194
MluNI TGGCCA 1 cut(s) 1323
MlyI GAGTC 2 cut(s) 92, 260
MmeI TCCRAC 1 cut(s) 65
Mox20I TGGCCA 1 cut(s) 1323
MroXI GAANNNNTTC 1 cut(s) 1440
MscI TGGCCA 1 cut(s) 1323
MseI TTAA 2 cut(s) 1119, 1230
MslI CAYNNNNRTG 2 cut(s) 260, 1281
Msp20I TGGCCA 1 cut(s) 1323
MspA1I CMGCKG 1 cut(s) 577
MspI CCGG 4 cut(s) 302, 419, 629, 1007
MspR9I CCNGG 5 cut(s) 47, 630, 809, 977, 1412
MvaI CCWGG 4 cut(s) 47, 809, 977, 1412
MwoI GCNNNNNNNGC 5 cut(s) 182, 191, 197, 571, 1165
NciI CCSGG 1 cut(s) 630
NcoI CCATGG 3 cut(s) 484, 598, 1324
NdeII GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
NlaIII CATG 8 cut(s) 25, 488, 551, 602, 941, 1280, 1306, 1328
NlaIV GGNNCC 5 cut(s) 7, 513, 789, 1019, 1356
NmeAIII GCCGAG 2 cut(s) 256, 546
NmuCI GTSAC 3 cut(s) 460, 913, 1390
PaqCI CACCTGC 1 cut(s) 176
PdmI GAANNNNTTC 1 cut(s) 1440
PfeI GAWTC 6 cut(s) 37, 415, 489, 757, 1399, 1436
PflMI CCANNNNNTGG 3 cut(s) 304, 508, 561
PfoI TCCNGGA 1 cut(s) 975
PkrI GCNGC 7 cut(s) 76, 187, 190, 193, 576, 613, 1183
PleI GAGTC 2 cut(s) 92, 260
PpsI GAGTC 2 cut(s) 92, 260
Ppu21I YACGTR 1 cut(s) 618
PpuMI RGGWCCY 1 cut(s) 787
Psp5II RGGWCCY 1 cut(s) 787
Psp6I CCWGG 4 cut(s) 45, 807, 975, 1410
PspEI GGTNACC 1 cut(s) 341
PspFI CCCAGC 1 cut(s) 475
PspGI CCWGG 4 cut(s) 45, 807, 975, 1410
PspN4I GGNNCC 5 cut(s) 7, 513, 789, 1019, 1356
PspPI GGNCC 5 cut(s) 787, 802, 815, 1018, 1328
PspPPI RGGWCCY 1 cut(s) 787
PstI CTGCAG 1 cut(s) 193
PsuI RGATCY 4 cut(s) 511, 982, 1245, 1430
RsaI GTAC 1 cut(s) 952
RsaNI GTAC 1 cut(s) 951
RseI CAYNNNNRTG 2 cut(s) 260, 1281
SaqAI TTAA 2 cut(s) 1119, 1230
SatI GCNGC 7 cut(s) 75, 186, 189, 192, 575, 612, 1182
Sau3AI GATC 9 cut(s) 309, 511, 793, 823, 934, 982, 1189, 1245, 1430
Sau96I GGNCC 5 cut(s) 787, 802, 815, 1018, 1328
SchI GAGTC 2 cut(s) 92, 260
ScrFI CCNGG 5 cut(s) 47, 630, 809, 977, 1412
SduI GDGCHC 3 cut(s) 555, 1276, 1420
SexAI ACCWGGT 1 cut(s) 807
SfcI CTRYAG 1 cut(s) 189
SinI GGWCC 3 cut(s) 787, 1018, 1328
SmiMI CAYNNNNRTG 2 cut(s) 260, 1281
SmlI CTYRAG 1 cut(s) 1148
SmoI CTYRAG 1 cut(s) 1148
SnaBI TACGTA 1 cut(s) 618
Sse9I AATT 4 cut(s) 347, 1002, 1044, 1194
SsiI CCGC 7 cut(s) 74, 575, 712, 1052, 1056, 1073, 1168
SspI AATATT 1 cut(s) 370
SspMI CTAG 6 cut(s) 728, 747, 1164, 1185, 1359, 1464
StyD4I CCNGG 5 cut(s) 45, 628, 807, 975, 1410
StyI CCWWGG 4 cut(s) 484, 598, 1163, 1324
TaaI ACNGT 1 cut(s) 589
TaiI ACGT 1 cut(s) 620
TaqI TCGA 5 cut(s) 101, 215, 906, 1192, 1218
TasI AATT 4 cut(s) 347, 1002, 1044, 1194
TauI GCSGC 2 cut(s) 77, 577
TfiI GAWTC 6 cut(s) 37, 415, 489, 757, 1399, 1436
Tru1I TTAA 2 cut(s) 1119, 1230
Tru9I TTAA 2 cut(s) 1119, 1230
TscAI CASTG 1 cut(s) 526
TseFI GTSAC 3 cut(s) 460, 913, 1390
TseI GCWGC 5 cut(s) 185, 188, 191, 611, 1181
Tsp45I GTSAC 3 cut(s) 460, 913, 1390
TspDTI ATGAA 6 cut(s) 38, 136, 362, 1106, 1110, 1306
TspRI CASTG 1 cut(s) 526
Van91I CCANNNNNTGG 3 cut(s) 304, 508, 561
VneI GTGCAC 1 cut(s) 1416
VpaK11BI GGWCC 3 cut(s) 787, 1018, 1328
XagI CCTNNNNNAGG 1 cut(s) 1206
XapI RAATTY 2 cut(s) 1002, 1194
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XmaJI CCTAGG 1 cut(s) 1163
XmiI GTMKAC 1 cut(s) 1028
XmnI GAANNNNTTC 1 cut(s) 1440
XspI CTAG 6 cut(s) 728, 747, 1164, 1185, 1359, 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.