Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0013055

Physical Location & Seq

Genomic Coordinates Forward (+)

27739225 .. 27743265

Gene Structure 4041 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1295600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2667 bp

ATGAAATTGCAAGCTCCTCCTCACCATCTCATTTTCTCCGTTGTTCTCTCCCTCTCCCTCTCTCTCTCCCTCACTCCCCTCAACGCTCTTCAATTTCAAACGCTCACTGCAATTCACAGAAGAATTCTCCACCAGCCCCTGTTTCCAGACAGCTCCTCCCCTCCGCCGGACACCCCGTCGCCGCCGATTCCACCGCCGCCTCCGCCGGACACTTCAAGCGACCAGCCATTTTTCCATGAATTGCCATCTGGGTCGACCCCAGATCAGACTCAACCCGCACCGCTGCCGTCGAACGCCACCACTGTGCAGAATCCACAAGCGCCGCAACCGACCAAGGGGACGAAGAAAGTCGCCATTGCTGCTTTGGTCGGAATTGTGACTCTCGGAATGCTCTCCGGATTCGCCTTCTTCCTTTACCGCCACCGAGTCAAACACCCGTCCGAGTCTCAGAAACTCGTCAATGGCGGAGGACCCGGTTCCCAGAGATTCGCCGACGACCCGAGTGTCCCACCCTCGAACTTCCTCTACATTGGCACAGTCGAACCCAGCCACACGTCGACGACGAGCAGCGAAGCCGTTAGCGGACCAACAACTGTGGAATTGAACCGGTCTCCGTATCACAGACTGAACTCTGTCAAAAGATCGGATCGGTACCGGCCGAGTCCCGAGTTGCAGCCGCTTCCTCCTCTGACCAAACCTCCTCAGAACCTCAACTCGCCGTCAGCTATGTCGTCTTCCGATGAAGAGAGCAATGAAACGGCGTTTCATTCGCCGAATTGCTCCTCCATCAGCTACGATGACAGCTACTACACGCCGAAGCAGAGCAGCAACAATGGAGTCGCCAATTGTGCTCCAATTCACGTTGCCAGTTCAATTCCCCACTCGAAACGAACTTCTCCGAAATCGCGGCTTTCGGTTTCTTCCACCACAAGGAACCATGCCGCTCCGTCGCCTCCCCAGCCACCTCCCCCGCCGCCAATGCAAATTCAGACTCAAACCCACGACGCCCAACAGGGAGCTCCATCGTTTTCTAATAAGAGGCCGAAATTCTCCTCCCCTCCACCACCTCCACCAAATTTGGTGCGTGTATCTAGAGCCCCTGTTCCGCCTCCTCCGCCACCGCCGCCGTCGCGACCGACGATATTAAGGCAAGTTGGGGATTCAGAAAGGGTTGTTTCTGCAAGGCCAGCCCAATCTCCCGCAAAGCCACAGCCACAATCCTCCTTTGCAGCAATCCCAAAAGGGCCTTTCGAAAATGGGACAAGAAAACCTGCTGAGAGATTTGTTGATGAGAGCTTGGCGTCTTCAGAGAGTTTTGAGAATGAAGATTCAGGAGGGGCAAAGCCCAAGCTGAAGCCTCTGCACTGGGACAAGGTCCGGGCAACCTCCGACCGCGCTACCGTGTGGGATCAGCTGAAATCGAGCTCATTCCAGTTAAATGAGGACATGATGGAGACTCTTTTCGGGTGTAACCCGGCGAATTCAGTCCCGAAAGAGACTACTAGACGATCAGTTCTTCCTCCTGTTGAGCAGGAGAACAGGGTTTTGGATCCAAAGAAGTCACAGAACATAGCAATACTATTGAGAGCACTGAATGTAGCACGAGATGAGGTCACTGAAGCGCTTTTAGATGGTAACCCCGAAGGCTTGGGCACTGAGCTGTTGGAAACTCTGGTGAAGATGGCTCCAACAAAGGAAGAAGAAATTAAGCTTCGAGACTACAAGGGTGACGTCTCAAAATTAGGGACTGCTGAACGCTTTCTGAAAGCTGTGCTCGATATCCCATTTGCCTTTAAGAGAGTTGAGGCAATGCTATACAGAGCTAATTTTGATACAGAAGTGAAGTACCTGAGAAAGTCCTTTCAAACGTTGGAGGAAGCAAGTGAAGAACTAAAGAGCAGTCGATTATTCCTCAAACTCCTTGAAGCTGTTCTCAAGACAGGGAACCGAATGAATGTTGGGACCAATCGTGGTGATGCTAAATCTTTCAAACTTGATACACTTTTAAAACTAGTAGACGTAAAGGCAACAGATGGAAAGACCACATTGCTCCATTTTGTGGTCCAAGAGATCATAAAATCCGAAGGTGAAGTTGTTGATTCTACAAATGAGAATGCTAAAAACATGCCTGTCAATACCAAGGAAGATGGTTTCAGAAAGCAAGGATTACAAATGGTTGCAGGGCTGGGCAGAGACCTCAGCAACGTCAAGAAGGCAGCAGGAATGGACTCAGATGTCCTAAGTAGCTACGTGTCGAAGCTTGAAATGGGGCTTCAGAAGGTCAAACAGGTTTTGCAGTATGAGAAGCCCGATATGCAAGGGAAATTCTTCAACTCGATGAAGGTATTTTTAAAAGAGGCCGAGGATGAAATTCTTAGGGTCAAGGCTGATGAAAGAAAGGCTTTAATTCTGGTGAAAGAGGTTACCGAATATTTTCATGGGGATACAACAAAGGAGGAAGCCCATCCTTTCAGAATCTTCATGATCGTGAGAGATTTTCTAACTGTACTGGACCAAGTTTGCAAGGAAGTGGGGATGCTGCAGGATAGAACACTGGTGGGCTCTGCTAGATCATTCCGCATAACATCAACTGCTCCTCTACCAGTTCTCAACAGTTATAACGTGAGACAAGATAACAGTTCGGATGATGAAAGCTTGTCACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005819 GO:0005856 GO:0005886 GO:0008092 GO:0009524 GO:0015630 GO:0016020 GO:0030312 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

889

Amino Acids

97.58

Weight (kDa)

8.81

Isoelectric Point (pI)

54.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	447 - 837	2.8e-116	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67470
fragaria_vesca	FvH4_1g17500 FvH4_1g17500 FvH4_1g17500
malus_domestica	MD02G1184200.v1.1 MD15G1295600.v1.1
prunus_persica	Prupe.6G222200_v2.0.a1 Prupe.6G222200_v2.0.a1
pyrus_communis	pycom02g14940 pycom15g25850
rosa_chinensis	RchiOBHm_Chr2g0107731
rosa_laevigata	RLG00000017611
rosa_multiflora	Rmu_sc0009624.1_g000008
rosa_roxburghii	Rroxscaffold_2G00135990
rosa_rugosa	Rorug02G0147200
rosa_samantha	Rh2BG209400 Rh2CG201600
rosa_wichuraiana	Rw2G015550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2619
AasI	GACNNNNNNGTC	2 cut(s)	503, 2234
AatII	GACGTC	1 cut(s)	1734
Acc36I	ACCTGC	1 cut(s)	1279
Acc65I	GGTACC	1 cut(s)	651
AccB1I	GGYRCC	1 cut(s)	651
AccB7I	CCANNNNNTGG	1 cut(s)	2059
AccBSI	CCGCTC	1 cut(s)	944
AccI	GTMKAC	3 cut(s)	254, 557, 2016
AccII	CGCG	3 cut(s)	907, 1132, 1395
AccIII	TCCGGA	1 cut(s)	395
AclI	AACGTT	1 cut(s)	1868
AclWI	GGATC	4 cut(s)	654, 1416, 1544, 1557
AcoI	YGGCCR	1 cut(s)	656
AcsI	RAATTY	7 cut(s)	123, 984, 1046, 1075, 1480, 2324, 2370
AcuI	CTGAAG	4 cut(s)	1290, 1373, 1638, 2258
AcyI	GRCGYC	3 cut(s)	1005, 1301, 1731
AfaI	GTAC	3 cut(s)	653, 1847, 2508
AfeI	AGCGCT	1 cut(s)	1623
AfiI	CCNNNNNNNGG	4 cut(s)	166, 335, 930, 2059
AflIII	ACRYGT	2 cut(s)	552, 2250
AgeI	ACCGGT	1 cut(s)	606
AhdI	GACNNNNNGTC	1 cut(s)	175
AhlI	ACTAGT	1 cut(s)	2011
AjiI	CACGTC	1 cut(s)	555
AjuI	GAANNNNNNNTTGG	2 cut(s)	1529, 1561
AleI	CACNNNNGTG	1 cut(s)	302
Alw21I	GWGCWC	5 cut(s)	853, 1021, 1427, 1591, 1776
Alw26I	GTCTC	8 cut(s)	450, 615, 1448, 1490, 1710, 1738, 2187, 2620
AlwI	GGATC	4 cut(s)	654, 1416, 1544, 1557
AlwNI	CAGNNNCTG	1 cut(s)	139
Ama87I	CYCGRG	2 cut(s)	499, 665
Aor13HI	TCCGGA	1 cut(s)	395
Aor51HI	AGCGCT	1 cut(s)	1623
AoxI	GGCC	5 cut(s)	656, 1040, 1184, 1244, 2358
ApeKI	GCWGC	8 cut(s)	283, 359, 567, 673, 825, 1229, 2216, 2539
ApoI	RAATTY	7 cut(s)	123, 984, 1046, 1075, 1480, 2324, 2370
AsiGI	ACCGGT	1 cut(s)	606
Asp700I	GAANNNNTTC	4 cut(s)	1758, 1929, 2327, 2433
Asp718I	GGTACC	1 cut(s)	651
AspLEI	GCGC	3 cut(s)	322, 1397, 1624
AspS9I	GGNCC	7 cut(s)	470, 584, 1244, 1375, 1962, 2062, 2512
AsuC2I	CCSGG	3 cut(s)	474, 1379, 1475
AsuHPI	GGTGA	7 cut(s)	14, 1687, 1739, 1985, 2099, 2425, 2652
AsuII	TTCGAA	1 cut(s)	1251
AvaI	CYCGRG	2 cut(s)	499, 665
AvaII	GGWCC	6 cut(s)	470, 584, 1375, 1962, 2062, 2512
BaeGI	GKGCMC	1 cut(s)	1655
BaeI	ACNNNNGTAYC	2 cut(s)	1824, 1857
BamHI	GGATCC	1 cut(s)	1549
BanI	GGYRCC	1 cut(s)	651
BanII	GRGCYC	4 cut(s)	1021, 1099, 1427, 2564
BauI	CACGAG	1 cut(s)	1602
BbsI	GAAGAC	2 cut(s)	726, 1296
Bbv12I	GWGCWC	5 cut(s)	853, 1021, 1427, 1591, 1776
BbvCI	CCTCAGC	1 cut(s)	2198
BbvI	GCAGC	8 cut(s)	270, 346, 579, 685, 837, 1241, 2228, 2526
BceAI	ACGGC	5 cut(s)	271, 560, 703, 774, 1111
BciVI	GTATCC	1 cut(s)	2437
BcnI	CCSGG	3 cut(s)	474, 1379, 1475
BcoDI	GTCTC	8 cut(s)	450, 615, 1448, 1490, 1710, 1738, 2187, 2620
BcuI	ACTAGT	1 cut(s)	2011
BfaI	CTAG	4 cut(s)	1092, 1503, 2012, 2568
BfmI	CTRYAG	1 cut(s)	2540
BfoI	RGCGCY	2 cut(s)	323, 1625
BfuAI	ACCTGC	1 cut(s)	1279
BfuI	GTATCC	1 cut(s)	2437
Bme1390I	CCNGG	3 cut(s)	474, 1379, 1475
Bme18I	GGWCC	6 cut(s)	470, 584, 1375, 1962, 2062, 2512
BmeRI	GACNNNNNGTC	1 cut(s)	175
BmeT110I	CYCGRG	2 cut(s)	499, 665
BmgBI	CACGTC	1 cut(s)	555
BmgT120I	GGNCC	7 cut(s)	470, 584, 1244, 1375, 1962, 2062, 2512
BmiI	GGNNCC	8 cut(s)	472, 478, 653, 935, 1551, 1686, 1946, 1963
BmrFI	CCNGG	3 cut(s)	474, 1379, 1475
BmrI	ACTGGG	1 cut(s)	1375
BmsI	GCATC	2 cut(s)	1966, 2526
BmuI	ACTGGG	1 cut(s)	1375
BpiI	GAAGAC	2 cut(s)	726, 1296
Bpu10I	CCTNAGC	1 cut(s)	2198
Bpu14I	TTCGAA	1 cut(s)	1251
BpuEI	CTTGAG	1 cut(s)	1919
BpuMI	CCSGG	3 cut(s)	474, 1379, 1475
BsaAI	YACGTR	1 cut(s)	2251
BsaHI	GRCGYC	3 cut(s)	1005, 1301, 1731
BsaI	GGTCTC	2 cut(s)	615, 2187
BsaJI	CCNNGG	3 cut(s)	333, 2139, 2361
BsaWI	WCCGGW	2 cut(s)	395, 606
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 682, 712
Bsc4I	CCNNNNNNNGG	4 cut(s)	166, 335, 930, 2059
Bse118I	RCCGGY	2 cut(s)	606, 654
Bse1I	ACTGG	6 cut(s)	867, 1370, 1432, 2514, 2559, 2603
Bse3DI	GCAATG	4 cut(s)	354, 757, 1815, 2045
BseAI	TCCGGA	1 cut(s)	395
BseDI	CCNNGG	3 cut(s)	333, 2139, 2361
BseGI	GGATG	4 cut(s)	2371, 2464, 2541, 2650
BseLI	CCNNNNNNNGG	4 cut(s)	166, 335, 930, 2059
BseMI	GCAATG	4 cut(s)	354, 757, 1815, 2045
BseMII	CTCAG	7 cut(s)	461, 716, 1266, 1647, 1841, 2212, 2244
BseNI	ACTGG	6 cut(s)	867, 1370, 1432, 2514, 2559, 2603
BseRI	GAGGAG	9 cut(s)	6, 9, 145, 675, 690, 772, 1042, 1101, 2586
BseSI	GKGCMC	1 cut(s)	1655
BseX3I	CGGCCG	1 cut(s)	656
BseXI	GCAGC	8 cut(s)	270, 346, 579, 685, 837, 1241, 2228, 2526
BseYI	CCCAGC	3 cut(s)	545, 957, 2185
BsgI	GTGCAG	2 cut(s)	326, 1346
Bsh1236I	CGCG	3 cut(s)	907, 1132, 1395
Bsh1285I	CGRYCG	3 cut(s)	659, 1136, 1393
BshFI	GGCC	5 cut(s)	658, 1042, 1186, 1246, 2360
BshNI	GGYRCC	1 cut(s)	651
BshTI	ACCGGT	1 cut(s)	606
BsiEI	CGRYCG	3 cut(s)	659, 1136, 1393
BsiHKAI	GWGCWC	5 cut(s)	853, 1021, 1427, 1591, 1776
BsiHKCI	CYCGRG	2 cut(s)	499, 665
BsiSI	CCGG	8 cut(s)	167, 206, 396, 474, 607, 655, 1378, 1475
BslFI	GGGAC	8 cut(s)	352, 491, 648, 1273, 1382, 1472, 1759, 1975
BslI	CCNNNNNNNGG	4 cut(s)	166, 335, 930, 2059
BsmAI	GTCTC	8 cut(s)	450, 615, 1448, 1490, 1710, 1738, 2187, 2620
BsmBI	CGTCTC	1 cut(s)	1738
BsmFI	GGGAC	8 cut(s)	352, 491, 648, 1273, 1382, 1472, 1759, 1975
BsmI	GAATGC	2 cut(s)	393, 2119
BsnI	GGCC	5 cut(s)	658, 1042, 1186, 1246, 2360
Bso31I	GGTCTC	2 cut(s)	615, 2187
BsoBI	CYCGRG	2 cut(s)	499, 665
Bsp119I	TTCGAA	1 cut(s)	1251
Bsp1286I	GDGCHC	8 cut(s)	853, 1021, 1099, 1427, 1591, 1655, 1776, 2564
Bsp13I	TCCGGA	1 cut(s)	395
Bsp143I	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
Bsp68I	TCGCGA	1 cut(s)	1132
BspANI	GGCC	5 cut(s)	658, 1042, 1186, 1246, 2360
BspCNI	CTCAG	7 cut(s)	460, 715, 1267, 1648, 1842, 2211, 2243
BspEI	TCCGGA	1 cut(s)	395
BspFNI	CGCG	3 cut(s)	907, 1132, 1395
BspHI	TCATGA	1 cut(s)	2481
BspLI	GGNNCC	8 cut(s)	472, 478, 653, 935, 1551, 1686, 1946, 1963
BspMAI	CTGCAG	1 cut(s)	2544
BspMI	ACCTGC	1 cut(s)	1279
BspPI	GGATC	4 cut(s)	654, 1416, 1544, 1557
BspQI	GCTCTTC	1 cut(s)	93
BspT104I	TTCGAA	1 cut(s)	1251
BspT107I	GGYRCC	1 cut(s)	651
BspTNI	GGTCTC	2 cut(s)	615, 2187
BsrBI	CCGCTC	1 cut(s)	944
BsrDI	GCAATG	4 cut(s)	354, 757, 1815, 2045
BsrFI	RCCGGY	2 cut(s)	606, 654
BsrI	ACTGG	6 cut(s)	867, 1370, 1432, 2514, 2559, 2603
BssAI	RCCGGY	2 cut(s)	606, 654
BssECI	CCNNGG	3 cut(s)	333, 2139, 2361
BssMI	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
BssNI	GRCGYC	3 cut(s)	1005, 1301, 1731
BssSI	CACGAG	1 cut(s)	1602
BssT1I	CCWWGG	2 cut(s)	333, 2139
Bst2BI	CACGAG	1 cut(s)	1602
Bst4CI	ACNGT	7 cut(s)	304, 538, 595, 1402, 2506, 2615, 2639
Bst6I	CTCTTC	2 cut(s)	93, 738
BstACI	GRCGYC	3 cut(s)	1005, 1301, 1731
BstBAI	YACGTR	1 cut(s)	2251
BstBI	TTCGAA	1 cut(s)	1251
BstC8I	GCNNGC	2 cut(s)	12, 1188
BstDEI	CTNAG	9 cut(s)	447, 702, 1275, 1656, 1850, 2198, 2230, 2240, 2375
BstEII	GGTNACC	2 cut(s)	1634, 2422
BstF5I	GGATG	4 cut(s)	2371, 2464, 2541, 2650
BstFNI	CGCG	3 cut(s)	907, 1132, 1395
BstH2I	RGCGCY	2 cut(s)	323, 1625
BstHHI	GCGC	3 cut(s)	322, 1397, 1624
BstKTI	GATC	9 cut(s)	265, 644, 649, 1411, 1511, 1552, 2073, 2487, 2573
BstMAI	GTCTC	8 cut(s)	450, 615, 1448, 1490, 1710, 1738, 2187, 2620
BstMBI	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
BstMCI	CGRYCG	3 cut(s)	659, 1136, 1393
BstNSI	RCATGY	1 cut(s)	2128
BstPI	GGTNACC	2 cut(s)	1634, 2422
BstSCI	CCNGG	3 cut(s)	472, 1377, 1473
BstSFI	CTRYAG	1 cut(s)	2540
BstSLI	GKGCMC	1 cut(s)	1655
BstUI	CGCG	3 cut(s)	907, 1132, 1395
BstV1I	GCAGC	8 cut(s)	270, 346, 579, 685, 837, 1241, 2228, 2526
BstV2I	GAAGAC	2 cut(s)	726, 1296
BstX2I	RGATCY	1 cut(s)	1549
BstYI	RGATCY	1 cut(s)	1549
BstZI	CGGCCG	1 cut(s)	656
BsuI	GTATCC	1 cut(s)	2437
BsuRI	GGCC	5 cut(s)	658, 1042, 1186, 1246, 2360
BtrI	CACGTC	1 cut(s)	555
BtsCI	GGATG	4 cut(s)	2371, 2464, 2541, 2650
BtsI	GCAGTG	1 cut(s)	105
BtsIMutI	CAGTG	7 cut(s)	105, 300, 1363, 1589, 1614, 1653, 2552
BtuMI	TCGCGA	1 cut(s)	1132
BveI	ACCTGC	1 cut(s)	1279
Cac8I	GCNNGC	2 cut(s)	12, 1188
CaiI	CAGNNNCTG	1 cut(s)	139
CciI	TCATGA	1 cut(s)	2481
CfoI	GCGC	3 cut(s)	322, 1397, 1624
Cfr10I	RCCGGY	2 cut(s)	606, 654
Cfr13I	GGNCC	7 cut(s)	470, 584, 1244, 1375, 1962, 2062, 2512
CseI	GACGC	2 cut(s)	1013, 1290
Csp6I	GTAC	3 cut(s)	652, 1846, 2507
CspAI	ACCGGT	1 cut(s)	606
CspCI	CAANNNNNGTGG	4 cut(s)	576, 611, 1059, 1094
CviAII	CATG	6 cut(s)	236, 938, 1447, 2125, 2438, 2482
CviQI	GTAC	3 cut(s)	652, 1846, 2507
DdeI	CTNAG	9 cut(s)	447, 702, 1275, 1656, 1850, 2198, 2230, 2240, 2375
DpnI	GATC	9 cut(s)	264, 643, 648, 1410, 1510, 1551, 2072, 2486, 2572
DpnII	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
DraI	TTTAAA	2 cut(s)	2007, 2352
DrdI	GACNNNNNNGTC	2 cut(s)	503, 2234
DriI	GACNNNNNGTC	1 cut(s)	175
DseDI	GACNNNNNNGTC	2 cut(s)	503, 2234
EaeI	YGGCCR	1 cut(s)	656
EagI	CGGCCG	1 cut(s)	656
Eam1104I	CTCTTC	2 cut(s)	93, 738
Eam1105I	GACNNNNNGTC	1 cut(s)	175
EarI	CTCTTC	2 cut(s)	93, 738
EciI	GGCGGA	5 cut(s)	153, 192, 480, 1095, 1104
Ecl136II	GAGCTC	2 cut(s)	1019, 1425
EclXI	CGGCCG	1 cut(s)	656
Eco130I	CCWWGG	2 cut(s)	333, 2139
Eco24I	GRGCYC	4 cut(s)	1021, 1099, 1427, 2564
Eco31I	GGTCTC	2 cut(s)	615, 2187
Eco32I	GATATC	1 cut(s)	1780
Eco47I	GGWCC	6 cut(s)	470, 584, 1375, 1962, 2062, 2512
Eco47III	AGCGCT	1 cut(s)	1623
Eco52I	CGGCCG	1 cut(s)	656
Eco53kI	GAGCTC	2 cut(s)	1019, 1425
Eco57I	CTGAAG	4 cut(s)	1290, 1373, 1638, 2258
Eco88I	CYCGRG	2 cut(s)	499, 665
Eco91I	GGTNACC	2 cut(s)	1634, 2422
EcoICRI	GAGCTC	2 cut(s)	1019, 1425
EcoO109I	RGGNCCY	2 cut(s)	470, 1244
EcoO65I	GGTNACC	2 cut(s)	1634, 2422
EcoRI	GAATTC	2 cut(s)	123, 1480
EcoRV	GATATC	1 cut(s)	1780
EcoT14I	CCWWGG	2 cut(s)	333, 2139
EcoT38I	GRGCYC	4 cut(s)	1021, 1099, 1427, 2564
ErhI	CCWWGG	2 cut(s)	333, 2139
Esp3I	CGTCTC	1 cut(s)	1738
FaeI	CATG	6 cut(s)	239, 941, 1450, 2128, 2441, 2485
FalI	AAGNNNNNCTT	2 cut(s)	2386, 2418
FaqI	GGGAC	8 cut(s)	352, 491, 648, 1273, 1382, 1472, 1759, 1975
FatI	CATG	6 cut(s)	235, 937, 1446, 2124, 2437, 2481
FauI	CCCGC	3 cut(s)	283, 978, 1207
FblI	GTMKAC	3 cut(s)	254, 557, 2016
FokI	GGATG	4 cut(s)	2378, 2451, 2548, 2657
FriOI	GRGCYC	4 cut(s)	1021, 1099, 1427, 2564
FspBI	CTAG	4 cut(s)	1092, 1503, 2012, 2568
GlaI	GCGC	3 cut(s)	321, 1396, 1623
GsaI	CCCAGC	3 cut(s)	549, 961, 2189
HaeII	RGCGCY	2 cut(s)	323, 1625
HaeIII	GGCC	5 cut(s)	658, 1042, 1186, 1246, 2360
HapII	CCGG	8 cut(s)	167, 206, 396, 474, 607, 655, 1378, 1475
HgaI	GACGC	2 cut(s)	1013, 1290
HhaI	GCGC	3 cut(s)	322, 1397, 1624
Hin1I	GRCGYC	3 cut(s)	1005, 1301, 1731
Hin1II	CATG	6 cut(s)	239, 941, 1450, 2128, 2441, 2485
Hin6I	GCGC	3 cut(s)	320, 1395, 1622
HinP1I	GCGC	3 cut(s)	320, 1395, 1622
HincII	GTYRAC	2 cut(s)	255, 558
HindII	GTYRAC	2 cut(s)	255, 558
HindIII	AAGCTT	3 cut(s)	1709, 2258, 2653
HpaII	CCGG	8 cut(s)	167, 206, 396, 474, 607, 655, 1378, 1475
HphI	GGTGA	7 cut(s)	14, 1687, 1739, 1985, 2099, 2425, 2652
Hpy166II	GTNNAC	3 cut(s)	255, 558, 2017
Hpy8I	GTNNAC	3 cut(s)	255, 558, 2017
HpyAV	CCTTC	6 cut(s)	415, 1637, 2078, 2206, 2272, 2335
HpyCH4III	ACNGT	7 cut(s)	304, 538, 595, 1402, 2506, 2615, 2639
HpyCH4IV	ACGT	8 cut(s)	554, 861, 1731, 1868, 2019, 2205, 2250, 2622
HpyF3I	CTNAG	9 cut(s)	447, 702, 1275, 1656, 1850, 2198, 2230, 2240, 2375
HpySE526I	ACGT	8 cut(s)	554, 861, 1731, 1868, 2019, 2205, 2250, 2622
Hsp92I	GRCGYC	3 cut(s)	1005, 1301, 1731
Hsp92II	CATG	6 cut(s)	239, 941, 1450, 2128, 2441, 2485
HspAI	GCGC	3 cut(s)	320, 1395, 1622
Kpn2I	TCCGGA	1 cut(s)	395
KpnI	GGTACC	1 cut(s)	655
Kzo9I	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
LguI	GCTCTTC	1 cut(s)	93
Lsp1109I	GCAGC	8 cut(s)	270, 346, 579, 685, 837, 1241, 2228, 2526
LweI	GCATC	2 cut(s)	1966, 2526
MaeI	CTAG	4 cut(s)	1092, 1503, 2012, 2568
MaeII	ACGT	8 cut(s)	554, 861, 1731, 1868, 2019, 2205, 2250, 2622
MaeIII	GTNAC	8 cut(s)	376, 1469, 1560, 1612, 1634, 1727, 2422, 2658
MalI	GATC	9 cut(s)	264, 643, 648, 1410, 1510, 1551, 2072, 2486, 2572
MbiI	CCGCTC	1 cut(s)	944
MboI	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
MfeI	CAATTG	1 cut(s)	844
MflI	RGATCY	1 cut(s)	1549
MhlI	GDGCHC	8 cut(s)	853, 1021, 1099, 1427, 1591, 1655, 1776, 2564
MlyI	GAGTC	9 cut(s)	262, 373, 435, 452, 670, 846, 985, 1450, 2222
MmeI	TCCRAC	5 cut(s)	349, 1413, 1644, 1712, 1851
MroI	TCCGGA	1 cut(s)	395
MroXI	GAANNNNTTC	4 cut(s)	1758, 1929, 2327, 2433
MseI	TTAA	7 cut(s)	1145, 1436, 1707, 1794, 2006, 2351, 2405
MslI	CAYNNNNRTG	2 cut(s)	302, 2486
MspA1I	CMGCKG	2 cut(s)	283, 1414
MspI	CCGG	8 cut(s)	167, 206, 396, 474, 607, 655, 1378, 1475
MspR9I	CCNGG	3 cut(s)	474, 1379, 1475
MunI	CAATTG	1 cut(s)	844
Mva1269I	GAATGC	2 cut(s)	393, 2119
MvnI	CGCG	3 cut(s)	907, 1132, 1395
NciI	CCSGG	3 cut(s)	474, 1379, 1475
NdeII	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
NlaIII	CATG	6 cut(s)	239, 941, 1450, 2128, 2441, 2485
NlaIV	GGNNCC	8 cut(s)	472, 478, 653, 935, 1551, 1686, 1946, 1963
NmeAIII	GCCGAG	2 cut(s)	684, 2386
NmuCI	GTSAC	5 cut(s)	376, 1560, 1612, 1727, 2658
NruI	TCGCGA	1 cut(s)	1132
NspI	RCATGY	1 cut(s)	2128
NspV	TTCGAA	1 cut(s)	1251
OliI	CACNNNNGTG	1 cut(s)	302
PagI	TCATGA	1 cut(s)	2481
PciSI	GCTCTTC	1 cut(s)	93
PcsI	WCGNNNNNNNCGW	2 cut(s)	560, 1136
PctI	GAATGC	2 cut(s)	393, 2119
PdmI	GAANNNNTTC	4 cut(s)	1758, 1929, 2327, 2433
PfeI	GAWTC	8 cut(s)	187, 310, 399, 486, 1160, 1328, 2099, 2475
PflFI	GACNNNGTC	1 cut(s)	1373
PflMI	CCANNNNNTGG	1 cut(s)	2059
PinAI	ACCGGT	1 cut(s)	606
PleI	GAGTC	9 cut(s)	262, 373, 434, 451, 669, 845, 985, 1450, 2222
PpsI	GAGTC	9 cut(s)	262, 373, 434, 451, 669, 845, 985, 1450, 2222
Ppu21I	YACGTR	1 cut(s)	2251
PpuMI	RGGWCCY	1 cut(s)	470
PsiI	TTATAA	1 cut(s)	2619
Psp124BI	GAGCTC	2 cut(s)	1021, 1427
Psp1406I	AACGTT	1 cut(s)	1868
Psp5II	RGGWCCY	1 cut(s)	470
PspEI	GGTNACC	2 cut(s)	1634, 2422
PspFI	CCCAGC	3 cut(s)	545, 957, 2185
PspN4I	GGNNCC	8 cut(s)	472, 478, 653, 935, 1551, 1686, 1946, 1963
PspPI	GGNCC	7 cut(s)	470, 584, 1244, 1375, 1962, 2062, 2512
PspPPI	RGGWCCY	1 cut(s)	470
PsrI	GAACNNNNNNTAC	2 cut(s)	509, 541
PstI	CTGCAG	1 cut(s)	2544
PstNI	CAGNNNCTG	1 cut(s)	139
PsuI	RGATCY	1 cut(s)	1549
PsyI	GACNNNGTC	1 cut(s)	1373
PvuII	CAGCTG	1 cut(s)	1414
RruI	TCGCGA	1 cut(s)	1132
RsaI	GTAC	3 cut(s)	653, 1847, 2508
RsaNI	GTAC	3 cut(s)	652, 1846, 2507
RseI	CAYNNNNRTG	2 cut(s)	302, 2486
SacI	GAGCTC	2 cut(s)	1021, 1427
SalI	GTCGAC	2 cut(s)	253, 556
SapI	GCTCTTC	1 cut(s)	93
SaqAI	TTAA	7 cut(s)	1145, 1436, 1707, 1794, 2006, 2351, 2405
Sau3AI	GATC	9 cut(s)	262, 641, 646, 1408, 1508, 1549, 2070, 2484, 2570
Sau96I	GGNCC	7 cut(s)	470, 584, 1244, 1375, 1962, 2062, 2512
SchI	GAGTC	9 cut(s)	262, 373, 435, 452, 670, 846, 985, 1450, 2222
ScrFI	CCNGG	3 cut(s)	474, 1379, 1475
SduI	GDGCHC	8 cut(s)	853, 1021, 1099, 1427, 1591, 1655, 1776, 2564
SfaNI	GCATC	2 cut(s)	1966, 2526
SfcI	CTRYAG	1 cut(s)	2540
SfuI	TTCGAA	1 cut(s)	1251
SgrDI	CGTCGACG	1 cut(s)	556
SinI	GGWCC	6 cut(s)	470, 584, 1375, 1962, 2062, 2512
SmiMI	CAYNNNNRTG	2 cut(s)	302, 2486
SmlI	CTYRAG	1 cut(s)	1934
SmoI	CTYRAG	1 cut(s)	1934
SpeI	ACTAGT	1 cut(s)	2011
SspI	AATATT	1 cut(s)	2432
SspMI	CTAG	4 cut(s)	1092, 1503, 2012, 2568
SstI	GAGCTC	2 cut(s)	1021, 1427
StyD4I	CCNGG	3 cut(s)	472, 1377, 1473
StyI	CCWWGG	2 cut(s)	333, 2139
TaaI	ACNGT	7 cut(s)	304, 538, 595, 1402, 2506, 2615, 2639
TaiI	ACGT	8 cut(s)	557, 864, 1734, 1871, 2022, 2208, 2253, 2625
TaqII	GACCGA	1 cut(s)	1150
TatI	WGTACW	1 cut(s)	2506
TauI	GCSGC	8 cut(s)	184, 199, 325, 679, 910, 944, 976, 1126
TfiI	GAWTC	8 cut(s)	187, 310, 399, 486, 1160, 1328, 2099, 2475
Tru1I	TTAA	7 cut(s)	1145, 1436, 1707, 1794, 2006, 2351, 2405
Tru9I	TTAA	7 cut(s)	1145, 1436, 1707, 1794, 2006, 2351, 2405
TscAI	CASTG	7 cut(s)	112, 307, 1370, 1596, 1621, 1660, 2559
TseFI	GTSAC	5 cut(s)	376, 1560, 1612, 1727, 2658
TseI	GCWGC	8 cut(s)	283, 359, 567, 673, 825, 1229, 2216, 2539
Tsp45I	GTSAC	5 cut(s)	376, 1560, 1612, 1727, 2658
TspGWI	ACGGA	3 cut(s)	28, 603, 936
TspRI	CASTG	7 cut(s)	112, 307, 1370, 1596, 1621, 1660, 2559
Tth111I	GACNNNGTC	1 cut(s)	1373
Van91I	CCANNNNNTGG	1 cut(s)	2059
VpaK11BI	GGWCC	6 cut(s)	470, 584, 1375, 1962, 2062, 2512
XapI	RAATTY	7 cut(s)	123, 984, 1046, 1075, 1480, 2324, 2370
XbaI	TCTAGA	1 cut(s)	1091
XceI	RCATGY	1 cut(s)	2128
XcmI	CCANNNNNNNNNTGG	1 cut(s)	361
XmiI	GTMKAC	3 cut(s)	254, 557, 2016
XmnI	GAANNNNTTC	4 cut(s)	1758, 1929, 2327, 2433
XspI	CTAG	4 cut(s)	1092, 1503, 2012, 2568
ZraI	GACGTC	1 cut(s)	1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.