Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0013055

Physical Location & Seq

Genomic Coordinates Forward (+)

19611800 .. 19615809

Gene Structure 4010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG209400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGAGAGCTCAATTTTTCTGCATTATTCTACTATCCATCACTCTCGTCCATTCCGCTTCTTCTTCTGAGAATCAAATTAACCGAAGGATTCTACACCAACCGCTTTTTCCAGAGAGTTCGTCTCCTCCGCCGGAGCTTCTATCCCCGCCTCCTCCACCGCCTCCTCCGCCGGACAGTCCCGACCAGCCATTCTTCCATGAGCTGCCGACGGGACCGACGACTCCCGAGCAGAGCCAATCGCCGCCGGCGGTGTCCCAAAACAGCACCGTTCCGTTGCCACAAGCGCCGTTGCCGACAAAGTCAACAAAGAAAGTGGCGGTGGCCGTCTCCGTCGGAATCGTCACGCTCGGAATGCTGTCGGGTCTCGCGTTTTTTCTCTACCGCCACCGAGTCAAGCACCCGTCGGAGACTCAGAAACTCGTCAATGGCGGAGGGAGCAGCTCGCAGCGGTTCGCGGACGATTCCAGAGCGGCGCCGTCGAGCTTCCTTTATATCGGCACTGTCGAGCCGAGCCAGAACTCCACGAGCAGCGACGCCATGAGTGGAGTGACGCCGGAAGTGAACCGGTCGCCGTACCGGAAACTCAACTCGATCAAGAGATCGGATCGGTACCGGCCGAGTCCCGAGTTGCAACCGCTGCCGCCGCTGGCGAAGCCTCCGCCGCCTCAGAATCCCGATTCGCCGTCGTCGATGACGTCTTCGGACGACGAAGAGAGCCACGCGACGGCGTTTCACTCGCCGCAGTGCTCGTCGATTAGCTACGACGACAGCTATTACACGCCGAAGCAGAGCAGTATGTGTAGTACGGTGAGTAATGGCAGCAATCACTCTCAGACTCTCAATACTAATTCGGTTCCTCACTCAAAACGGACTTCACCGAAATCTCGACTCTCAGTCTCTAACAGGGCTGCTCCGGCTCCGCCGCCGCCTCCTCCGCCACCGCCAATGCCGGCAATTCACGACTTTCATCAAACAGTTTCGCATTCTCATAAGAAGCCAAAATTCTCAACCCCGCCACCACCGCCAAATATGAGTCTGCTTCAGTCAATAGCCAAGCCGAGCCGCCAAGTACCTACAGCCCCGGTTCCACCTCCACCGCCTCCGCCACCGTCACGAAGAATTGGGGATGATTCAGAAACAGTTGTTGATGCTAAGCCGACTCCAGTATCATCAACGCCACAATTGTCATCCACATCAACCCCGAAAGGCTGGTTTGAGAACGGGACGAGTAAAGCCAAACCTCTTCACCGAGCTGAGAAAAGCTTAGGCTCTGCAGAGAGTTTCGAGAATGATGATTCTGGGGGAGCAAAGCCGAAGTTGAAGCCTCTGCACTGGGACAAAGTTCGAGCAACCTCTGATAGAGCTACAGTATGGGACCAGCTGAAATCAAGCTCATTTCAATTAAATGAAGATATGATGGAGACTCTTTTCGGCTGCAATCCCGCGAATACGGTCCCAAAAGAACCTAGTACTACTACTACTAGAAGATCGGTTATGCCTCCTGTTGAGCAGGAAAACAGGGTTTTGGACCCCAAGAAGTCGCAGAACATAGCTATACTGTTGAGAGCACTAAATGTAGCAAGAGATGAGGTCGTTGAAGCTCTTTCCGATGGTAACCCAGAAGGCTTGGGCGCCGAGCTTTTGGAGACTCTGGTTAAGATGGCACCGACAAAGGAAGAAGAAATTAAACTTCGAGAGTACCAGGGTGACATCTCAAAATTAGGGTCTGCTGAACGGTTTCTGAAGGCAGTGCTTGATATCCCATTTGCTTTTAAGAGAGTTGAGGCAATGCTATACAGAGCTAACTTTGATACAGAAGTGAAATACCTAAGGAAGTCTTTTCAAACGCTCGAGGAAGCAAGTGAAGAATTGAAGAACAGTCGATTATTCCTAAAACTCCTTGAAGCTGTTCTCAGGACTGGAAACCGAATGAATGTTGGGACCAACCGTGGTGATGCTAAAGCTTTCAAACTTGATACGCTCTTAAAACTGGTCGACATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTTCAAGAGATTATAAGATCTGAAAGTCCAGGTTCTGAAACAAAGGAGAACATCAAGACAAAGGAAGGTGATTTCAAAAAGCAAGGATTGAAAATGGTGGCAGGGCTGAGCAAAGACCTCGGCAACGTCGCAAAAGCAGCAGGAATGGACTCAGACGTCCTAAGTAGCTATGTGTCAAAGCTTGCAATGGGGCTTGAGAAGGTCAGACTGGTCTTGCAGTATGACAAGGCAGATGTAGATGGAAAATTCTTCAACTCGATGAAGCTCTTTCTAAAAGAGGCTGAGGAGGAAATTCTTAGGATCAAGGCTGATGAAAGAAAGGCTTTATTTCTGGTGAAAGAGGTTACTCAATATTTCCATGGGGATACAGCAAAGGAGGAAGCCCATCCTTTCAGAATCTTCATGATTGTAAGAGATTTTCTTAAAGTATTGGACCATGTGTGCAAGGAAGTCGGGAATATGCAGGACAGAACACTGGTGGGTTCTGCTAGGTCATTCCGGATAGCTGCAACTGCTCCTCTACCAGTTCTCTCCAAGTATCACTTAAGACAAGAAGACACCTCGGACGACGACAGCTTTTCTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005819 GO:0005856 GO:0005886 GO:0008092 GO:0009524 GO:0015630 GO:0016020 GO:0030312 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

875

Amino Acids

96.14

Weight (kDa)

8.83

Isoelectric Point (pI)

55.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	436 - 824	1.6e-116	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67470
fragaria_vesca	FvH4_1g17500 FvH4_1g17500 FvH4_1g17500
malus_domestica	MD02G1184200.v1.1 MD15G1295600.v1.1
prunus_persica	Prupe.6G222200_v2.0.a1 Prupe.6G222200_v2.0.a1
pyrus_communis	pycom02g14940 pycom15g25850
rosa_chinensis	RchiOBHm_Chr2g0107731
rosa_laevigata	RLG00000017611
rosa_multiflora	Rmu_sc0009624.1_g000008
rosa_roxburghii	Rroxscaffold_2G00135990
rosa_rugosa	Rorug02G0147200
rosa_samantha	Rh2BG209400 Rh2CG201600
rosa_wichuraiana	Rw2G015550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2054
AasI	GACNNNNNNGTC	1 cut(s)	2195
AatII	GACGTC	2 cut(s)	698, 2199
Acc65I	GGTACC	1 cut(s)	609
AccB1I	GGYRCC	4 cut(s)	472, 609, 1631, 1663
AccB7I	CCANNNNNTGG	1 cut(s)	2038
AccBSI	CCGCTC	1 cut(s)	470
AccI	GTMKAC	1 cut(s)	1995
AccII	CGCG	4 cut(s)	368, 455, 722, 1445
AccIII	TCCGGA	1 cut(s)	2538
AclWI	GGATC	2 cut(s)	612, 2348
AcoI	YGGCCR	2 cut(s)	321, 614
AcsI	RAATTY	3 cut(s)	1001, 2285, 2331
AcuI	CTGAAG	2 cut(s)	1025, 1763
AcyI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1632, 2196
AdeI	CACNNNGTG	1 cut(s)	2038
AfaI	GTAC	6 cut(s)	575, 611, 805, 1071, 1471, 1700
AfiI	CCNNNNNNNGG	2 cut(s)	724, 2038
AflII	CTTAAG	1 cut(s)	2584
AgeI	ACCGGT	1 cut(s)	564
AhdI	GACNNNNNGTC	1 cut(s)	893
AjnI	CCWGG	2 cut(s)	1701, 2068
AjuI	GAANNNNNNNTTGG	2 cut(s)	90, 122
Alw21I	GWGCWC	3 cut(s)	10, 749, 1570
Alw26I	GTCTC	7 cut(s)	126, 331, 368, 401, 901, 1415, 1640
AlwI	GGATC	2 cut(s)	612, 2348
AlwNI	CAGNNNCTG	1 cut(s)	2075
Ama87I	CYCGRG	3 cut(s)	224, 623, 1850
Aor13HI	TCCGGA	1 cut(s)	2538
AoxI	GGCC	2 cut(s)	321, 614
ApoI	RAATTY	3 cut(s)	1001, 2285, 2331
ArsI	GACNNNNNNTTYG	2 cut(s)	1709, 1741
AsiGI	ACCGGT	1 cut(s)	564
Asp700I	GAANNNNTTC	2 cut(s)	1737, 1908
Asp718I	GGTACC	1 cut(s)	609
AspLEI	GCGC	3 cut(s)	286, 475, 1634
AspS9I	GGNCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
AsuC2I	CCSGG	1 cut(s)	1082
AsuHPI	GGTGA	7 cut(s)	820, 867, 1238, 1718, 1964, 2120, 2386
AvaI	CYCGRG	3 cut(s)	224, 623, 1850
AvaII	GGWCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
AxyI	CCTNAGG	1 cut(s)	1829
BaeI	ACNNNNGTAYC	4 cut(s)	1149, 1182, 1803, 1836
BanI	GGYRCC	4 cut(s)	472, 609, 1631, 1663
BanII	GRGCYC	1 cut(s)	10
BauI	CACGAG	1 cut(s)	523
BbsI	GAAGAC	2 cut(s)	690, 2601
Bbv12I	GWGCWC	3 cut(s)	10, 749, 1570
BbvCI	CCTCAGC	1 cut(s)	2322
BccI	CCATC	7 cut(s)	44, 1411, 1604, 1654, 2006, 2273, 2433
BceAI	ACGGC	6 cut(s)	271, 308, 460, 556, 667, 741
BcgI	CGANNNNNNTGC	4 cut(s)	2140, 2174, 2473, 2507
BciT130I	CCWGG	2 cut(s)	1703, 2070
BciVI	GTATCC	1 cut(s)	2398
BcnI	CCSGG	1 cut(s)	1082
BcoDI	GTCTC	7 cut(s)	126, 331, 368, 401, 901, 1415, 1640
BfaI	CTAG	3 cut(s)	1467, 1482, 2529
BfmI	CTRYAG	3 cut(s)	1074, 1272, 1365
BfoI	RGCGCY	3 cut(s)	287, 476, 1635
BfrI	CTTAAG	1 cut(s)	2584
BfuI	GTATCC	1 cut(s)	2398
BglII	AGATCT	1 cut(s)	2057
BlpI	GCTNAGC	2 cut(s)	1152, 2147
BmcAI	AGTACT	1 cut(s)	1471
Bme1390I	CCNGG	3 cut(s)	1082, 1703, 2070
Bme18I	GGWCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
BmeRI	GACNNNNNGTC	1 cut(s)	893
BmeT110I	CYCGRG	3 cut(s)	224, 623, 1850
BmgT120I	GGNCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
BmrFI	CCNGG	3 cut(s)	1082, 1703, 2070
BmrI	ACTGGG	1 cut(s)	1342
BmsI	GCATC	2 cut(s)	1138, 1945
BmuI	ACTGGG	1 cut(s)	1342
BpiI	GAAGAC	2 cut(s)	690, 2601
BplI	GAGNNNNNCTC	2 cut(s)	106, 138
BpmI	CTGGAG	1 cut(s)	1146
Bpu10I	CCTNAGC	2 cut(s)	1264, 2322
Bpu1102I	GCTNAGC	2 cut(s)	1152, 2147
BpuEI	CTTGAG	1 cut(s)	2255
BpuMI	CCSGG	1 cut(s)	1082
BsaHI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1632, 2196
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	6 cut(s)	1080, 1702, 1948, 2158, 2398, 2601
BsaWI	WCCGGW	3 cut(s)	564, 576, 2538
Bsc4I	CCNNNNNNNGG	2 cut(s)	724, 2038
Bse118I	RCCGGY	4 cut(s)	244, 564, 612, 949
Bse1I	ACTGG	7 cut(s)	1163, 1337, 1924, 1995, 2253, 2520, 2564
Bse21I	CCTNAGG	1 cut(s)	1829
Bse3DI	GCAATG	3 cut(s)	1794, 2024, 2232
BseAI	TCCGGA	1 cut(s)	2538
BseBI	CCWGG	2 cut(s)	1703, 2070
BseDI	CCNNGG	6 cut(s)	1080, 1702, 1948, 2158, 2398, 2601
BseGI	GGATG	3 cut(s)	1132, 1187, 2425
BseLI	CCNNNNNNNGG	2 cut(s)	724, 2038
BseMI	GCAATG	3 cut(s)	1794, 2024, 2232
BseNI	ACTGG	7 cut(s)	1163, 1337, 1924, 1995, 2253, 2520, 2564
BseRI	GAGGAG	6 cut(s)	114, 141, 153, 921, 2339, 2547
BseX3I	CGGCCG	1 cut(s)	614
BsgI	GTGCAG	1 cut(s)	1313
Bsh1236I	CGCG	4 cut(s)	368, 455, 722, 1445
Bsh1285I	CGRYCG	2 cut(s)	569, 617
BshFI	GGCC	2 cut(s)	323, 616
BshNI	GGYRCC	4 cut(s)	472, 609, 1631, 1663
BshTI	ACCGGT	1 cut(s)	564
BsiEI	CGRYCG	2 cut(s)	569, 617
BsiHKAI	GWGCWC	3 cut(s)	10, 749, 1570
BsiHKCI	CYCGRG	3 cut(s)	224, 623, 1850
BslFI	GGGAC	9 cut(s)	162, 225, 238, 606, 1237, 1349, 1388, 1439, 1954
BslI	CCNNNNNNNGG	2 cut(s)	724, 2038
BsmAI	GTCTC	7 cut(s)	126, 331, 368, 401, 901, 1415, 1640
BsmBI	CGTCTC	2 cut(s)	126, 331
BsmFI	GGGAC	9 cut(s)	162, 225, 238, 606, 1237, 1349, 1388, 1439, 1954
BsmI	GAATGC	2 cut(s)	357, 982
BsnI	GGCC	2 cut(s)	323, 616
Bso31I	GGTCTC	1 cut(s)	368
BsoBI	CYCGRG	3 cut(s)	224, 623, 1850
Bsp1286I	GDGCHC	3 cut(s)	10, 749, 1570
Bsp13I	TCCGGA	1 cut(s)	2538
Bsp143I	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
Bsp1720I	GCTNAGC	2 cut(s)	1152, 2147
Bsp19I	CCATGG	1 cut(s)	2398
BspANI	GGCC	2 cut(s)	323, 616
BspEI	TCCGGA	1 cut(s)	2538
BspFNI	CGCG	4 cut(s)	368, 455, 722, 1445
BspHI	TCATGA	1 cut(s)	2442
BspMAI	CTGCAG	1 cut(s)	1276
BspPI	GGATC	2 cut(s)	612, 2348
BspT107I	GGYRCC	4 cut(s)	472, 609, 1631, 1663
BspTI	CTTAAG	1 cut(s)	2584
BspTNI	GGTCTC	1 cut(s)	368
BsrBI	CCGCTC	1 cut(s)	470
BsrDI	GCAATG	3 cut(s)	1794, 2024, 2232
BsrFI	RCCGGY	4 cut(s)	244, 564, 612, 949
BsrI	ACTGG	7 cut(s)	1163, 1337, 1924, 1995, 2253, 2520, 2564
BssAI	RCCGGY	4 cut(s)	244, 564, 612, 949
BssECI	CCNNGG	6 cut(s)	1080, 1702, 1948, 2158, 2398, 2601
BssMI	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
BssNI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1632, 2196
BssSI	CACGAG	1 cut(s)	523
BssT1I	CCWWGG	1 cut(s)	2398
Bst2BI	CACGAG	1 cut(s)	523
Bst2UI	CCWGG	2 cut(s)	1703, 2070
Bst6I	CTCTTC	2 cut(s)	705, 1248
BstACI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1632, 2196
BstAFI	CTTAAG	1 cut(s)	2584
BstAPI	GCANNNNNTGC	1 cut(s)	637
BstC8I	GCNNGC	5 cut(s)	246, 443, 648, 951, 2223
BstDSI	CCRYGG	2 cut(s)	1948, 2398
BstEII	GGTNACC	1 cut(s)	1613
BstF5I	GGATG	3 cut(s)	1132, 1187, 2425
BstFNI	CGCG	4 cut(s)	368, 455, 722, 1445
BstH2I	RGCGCY	3 cut(s)	287, 476, 1635
BstHHI	GCGC	3 cut(s)	286, 475, 1634
BstKTI	GATC	6 cut(s)	594, 602, 607, 1490, 2060, 2343
BstMAI	GTCTC	7 cut(s)	126, 331, 368, 401, 901, 1415, 1640
BstMBI	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
BstMCI	CGRYCG	2 cut(s)	569, 617
BstNI	CCWGG	2 cut(s)	1703, 2070
BstPI	GGTNACC	1 cut(s)	1613
BstSCI	CCNGG	3 cut(s)	1080, 1701, 2068
BstSFI	CTRYAG	3 cut(s)	1074, 1272, 1365
BstUI	CGCG	4 cut(s)	368, 455, 722, 1445
BstV2I	GAAGAC	2 cut(s)	690, 2601
BstX2I	RGATCY	1 cut(s)	2057
BstYI	RGATCY	1 cut(s)	2057
BstZI	CGGCCG	1 cut(s)	614
Bsu36I	CCTNAGG	1 cut(s)	1829
BsuI	GTATCC	1 cut(s)	2398
BsuRI	GGCC	2 cut(s)	323, 616
BtgI	CCRYGG	2 cut(s)	1948, 2398
BtsCI	GGATG	3 cut(s)	1132, 1187, 2425
BtsI	GCAGTG	2 cut(s)	749, 1755
BtsIMutI	CAGTG	5 cut(s)	498, 749, 1330, 1755, 2513
Cac8I	GCNNGC	5 cut(s)	246, 443, 648, 951, 2223
CaiI	CAGNNNCTG	1 cut(s)	2075
CciI	TCATGA	1 cut(s)	2442
CfoI	GCGC	3 cut(s)	286, 475, 1634
Cfr10I	RCCGGY	4 cut(s)	244, 564, 612, 949
Cfr13I	GGNCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
CseI	GACGC	2 cut(s)	542, 559
Csp6I	GTAC	6 cut(s)	574, 610, 804, 1070, 1470, 1699
CspAI	ACCGGT	1 cut(s)	564
CspCI	CAANNNNNGTGG	2 cut(s)	294, 329
CviAII	CATG	5 cut(s)	197, 538, 2399, 2443, 2477
CviQI	GTAC	6 cut(s)	574, 610, 804, 1070, 1470, 1699
DinI	GGCGCC	2 cut(s)	474, 1633
DpnI	GATC	6 cut(s)	593, 601, 606, 1489, 2059, 2342
DpnII	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
DraIII	CACNNNGTG	1 cut(s)	2038
DrdI	GACNNNNNNGTC	1 cut(s)	2195
DriI	GACNNNNNGTC	1 cut(s)	893
DseDI	GACNNNNNNGTC	1 cut(s)	2195
EaeI	YGGCCR	2 cut(s)	321, 614
EagI	CGGCCG	1 cut(s)	614
Eam1104I	CTCTTC	2 cut(s)	705, 1248
Eam1105I	GACNNNNNGTC	1 cut(s)	893
EarI	CTCTTC	2 cut(s)	705, 1248
EciI	GGCGGA	7 cut(s)	117, 156, 444, 648, 909, 924, 1092
Ecl136II	GAGCTC	1 cut(s)	8
EclXI	CGGCCG	1 cut(s)	614
Eco130I	CCWWGG	1 cut(s)	2398
Eco24I	GRGCYC	1 cut(s)	10
Eco31I	GGTCTC	1 cut(s)	368
Eco32I	GATATC	1 cut(s)	1759
Eco47I	GGWCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
Eco52I	CGGCCG	1 cut(s)	614
Eco53kI	GAGCTC	1 cut(s)	8
Eco57I	CTGAAG	2 cut(s)	1025, 1763
Eco81I	CCTNAGG	1 cut(s)	1829
Eco88I	CYCGRG	3 cut(s)	224, 623, 1850
Eco91I	GGTNACC	1 cut(s)	1613
EcoICRI	GAGCTC	1 cut(s)	8
EcoO65I	GGTNACC	1 cut(s)	1613
EcoRII	CCWGG	2 cut(s)	1701, 2068
EcoRV	GATATC	1 cut(s)	1759
EcoT14I	CCWWGG	1 cut(s)	2398
EcoT38I	GRGCYC	1 cut(s)	10
EgeI	GGCGCC	2 cut(s)	474, 1633
EheI	GGCGCC	2 cut(s)	474, 1633
ErhI	CCWWGG	1 cut(s)	2398
Esp3I	CGTCTC	2 cut(s)	126, 331
FaeI	CATG	5 cut(s)	200, 541, 2402, 2446, 2480
FalI	AAGNNNNNCTT	6 cut(s)	1822, 1854, 2347, 2379, 2567, 2599
FaqI	GGGAC	9 cut(s)	162, 225, 238, 606, 1237, 1349, 1388, 1439, 1954
FatI	CATG	5 cut(s)	196, 537, 2398, 2442, 2476
FauI	CCCGC	3 cut(s)	153, 1020, 1450
FblI	GTMKAC	1 cut(s)	1995
FokI	GGATG	3 cut(s)	1139, 1174, 2412
FriOI	GRGCYC	1 cut(s)	10
FspBI	CTAG	3 cut(s)	1467, 1482, 2529
GlaI	GCGC	3 cut(s)	285, 474, 1633
GsuI	CTGGAG	1 cut(s)	1146
HaeII	RGCGCY	3 cut(s)	287, 476, 1635
HaeIII	GGCC	2 cut(s)	323, 616
HgaI	GACGC	2 cut(s)	542, 559
HhaI	GCGC	3 cut(s)	286, 475, 1634
Hin1I	GRCGYC	6 cut(s)	473, 534, 551, 695, 1632, 2196
Hin1II	CATG	5 cut(s)	200, 541, 2402, 2446, 2480
Hin6I	GCGC	3 cut(s)	284, 473, 1632
HinP1I	GCGC	3 cut(s)	284, 473, 1632
HincII	GTYRAC	2 cut(s)	303, 1996
HindII	GTYRAC	2 cut(s)	303, 1996
HindIII	AAGCTT	3 cut(s)	1261, 1962, 2219
HphI	GGTGA	7 cut(s)	820, 867, 1238, 1718, 1964, 2120, 2386
Hpy166II	GTNNAC	3 cut(s)	303, 562, 1996
Hpy8I	GTNNAC	3 cut(s)	303, 562, 1996
HpyAV	CCTTC	5 cut(s)	78, 1616, 1738, 2099, 2233
HpyCH4IV	ACGT	3 cut(s)	695, 2166, 2196
HpySE526I	ACGT	3 cut(s)	695, 2166, 2196
Hsp92I	GRCGYC	6 cut(s)	473, 534, 551, 695, 1632, 2196
Hsp92II	CATG	5 cut(s)	200, 541, 2402, 2446, 2480
HspAI	GCGC	3 cut(s)	284, 473, 1632
KasI	GGCGCC	2 cut(s)	472, 1631
Kpn2I	TCCGGA	1 cut(s)	2538
KpnI	GGTACC	1 cut(s)	613
KroI	GCCGGC	2 cut(s)	244, 949
KroNI	GCCGGC	2 cut(s)	246, 951
Kzo9I	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
LmnI	GCTCC	7 cut(s)	133, 435, 916, 922, 1304, 2034, 2560
LweI	GCATC	2 cut(s)	1138, 1945
MaeI	CTAG	3 cut(s)	1467, 1482, 2529
MaeII	ACGT	3 cut(s)	695, 2166, 2196
MaeIII	GTNAC	6 cut(s)	340, 547, 1110, 1613, 1706, 2383
MalI	GATC	6 cut(s)	593, 601, 606, 1489, 2059, 2342
MbiI	CCGCTC	1 cut(s)	470
MboI	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
MfeI	CAATTG	1 cut(s)	1181
MflI	RGATCY	1 cut(s)	2057
MhlI	GDGCHC	3 cut(s)	10, 749, 1570
Mly113I	GGCGCC	2 cut(s)	473, 1632
MmeI	TCCRAC	2 cut(s)	313, 384
MreI	CGCCGGCG	1 cut(s)	244
MroI	TCCGGA	1 cut(s)	2538
MroNI	GCCGGC	2 cut(s)	244, 949
MroXI	GAANNNNTTC	2 cut(s)	1737, 1908
MseI	TTAA	8 cut(s)	78, 1403, 1656, 1686, 1773, 1985, 2463, 2585
MspA1I	CMGCKG	4 cut(s)	448, 637, 646, 1381
MspCI	CTTAAG	1 cut(s)	2584
MspR9I	CCNGG	3 cut(s)	1082, 1703, 2070
MunI	CAATTG	1 cut(s)	1181
Mva1269I	GAATGC	2 cut(s)	357, 982
MvaI	CCWGG	2 cut(s)	1703, 2070
MvnI	CGCG	4 cut(s)	368, 455, 722, 1445
NaeI	GCCGGC	2 cut(s)	246, 951
NarI	GGCGCC	2 cut(s)	473, 1632
NciI	CCSGG	1 cut(s)	1082
NcoI	CCATGG	1 cut(s)	2398
NdeII	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
NgoMIV	GCCGGC	2 cut(s)	244, 949
NlaIII	CATG	5 cut(s)	200, 541, 2402, 2446, 2480
NmeAIII	GCCGAG	5 cut(s)	534, 642, 1083, 1660, 2139
NmuCI	GTSAC	4 cut(s)	340, 547, 1110, 1706
PaeR7I	CTCGAG	1 cut(s)	1850
PagI	TCATGA	1 cut(s)	2442
PcsI	WCGNNNNNNNCGW	5 cut(s)	215, 365, 501, 686, 692
PctI	GAATGC	2 cut(s)	357, 982
PdiI	GCCGGC	2 cut(s)	246, 951
PdmI	GAANNNNTTC	2 cut(s)	1737, 1908
PfeI	GAWTC	9 cut(s)	70, 88, 336, 461, 670, 677, 1130, 1295, 2436
PflFI	GACNNNGTC	1 cut(s)	298
PflMI	CCANNNNNTGG	1 cut(s)	2038
PinAI	ACCGGT	1 cut(s)	564
PluTI	GGCGCC	2 cut(s)	476, 1635
PsiI	TTATAA	1 cut(s)	2054
Psp124BI	GAGCTC	1 cut(s)	10
Psp6I	CCWGG	2 cut(s)	1701, 2068
PspEI	GGTNACC	1 cut(s)	1613
PspGI	CCWGG	2 cut(s)	1701, 2068
PspPI	GGNCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
PspXI	VCTCGAGB	1 cut(s)	1850
PstI	CTGCAG	1 cut(s)	1276
PstNI	CAGNNNCTG	1 cut(s)	2075
PsuI	RGATCY	1 cut(s)	2057
PsyI	GACNNNGTC	1 cut(s)	298
PvuII	CAGCTG	1 cut(s)	1381
RsaI	GTAC	6 cut(s)	575, 611, 805, 1071, 1471, 1700
RsaNI	GTAC	6 cut(s)	574, 610, 804, 1070, 1470, 1699
SacI	GAGCTC	1 cut(s)	10
SalI	GTCGAC	1 cut(s)	1994
SaqAI	TTAA	8 cut(s)	78, 1403, 1656, 1686, 1773, 1985, 2463, 2585
Sau3AI	GATC	6 cut(s)	591, 599, 604, 1487, 2057, 2340
Sau96I	GGNCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
ScaI	AGTACT	1 cut(s)	1471
ScrFI	CCNGG	3 cut(s)	1082, 1703, 2070
SduI	GDGCHC	3 cut(s)	10, 749, 1570
SfaNI	GCATC	2 cut(s)	1138, 1945
SfcI	CTRYAG	3 cut(s)	1074, 1272, 1365
SfoI	GGCGCC	2 cut(s)	474, 1633
Sfr274I	CTCGAG	1 cut(s)	1850
SgrAI	CRCCGGYG	1 cut(s)	244
SinI	GGWCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
SlaI	CTCGAG	1 cut(s)	1850
SmlI	CTYRAG	3 cut(s)	1850, 2234, 2584
SmoI	CTYRAG	3 cut(s)	1850, 2234, 2584
SspDI	GGCGCC	2 cut(s)	472, 1631
SspI	AATATT	1 cut(s)	2393
SspMI	CTAG	3 cut(s)	1467, 1482, 2529
SstI	GAGCTC	1 cut(s)	10
StyD4I	CCNGG	3 cut(s)	1080, 1701, 2068
StyI	CCWWGG	1 cut(s)	2398
TaiI	ACGT	3 cut(s)	698, 2169, 2199
TaqII	GACCGA	1 cut(s)	229
TatI	WGTACW	1 cut(s)	1469
TauI	GCSGC	9 cut(s)	244, 473, 643, 646, 664, 742, 925, 928, 1065
TfiI	GAWTC	9 cut(s)	70, 88, 336, 461, 670, 677, 1130, 1295, 2436
Tru1I	TTAA	8 cut(s)	78, 1403, 1656, 1686, 1773, 1985, 2463, 2585
Tru9I	TTAA	8 cut(s)	78, 1403, 1656, 1686, 1773, 1985, 2463, 2585
TscAI	CASTG	5 cut(s)	505, 749, 1337, 1755, 2520
TseFI	GTSAC	4 cut(s)	340, 547, 1110, 1706
Tsp45I	GTSAC	4 cut(s)	340, 547, 1110, 1706
TspDTI	ATGAA	6 cut(s)	956, 1422, 1946, 2315, 2367, 2431
TspGWI	ACGGA	3 cut(s)	261, 319, 883
TspRI	CASTG	5 cut(s)	505, 749, 1337, 1755, 2520
Tth111I	GACNNNGTC	1 cut(s)	298
Van91I	CCANNNNNTGG	1 cut(s)	2038
Vha464I	CTTAAG	1 cut(s)	2584
VpaK11BI	GGWCC	6 cut(s)	212, 1375, 1453, 1528, 1941, 2473
XapI	RAATTY	3 cut(s)	1001, 2285, 2331
XhoI	CTCGAG	1 cut(s)	1850
XmiI	GTMKAC	1 cut(s)	1995
XmnI	GAANNNNTTC	2 cut(s)	1737, 1908
XspI	CTAG	3 cut(s)	1467, 1482, 2529
ZraI	GACGTC	2 cut(s)	696, 2197
ZrmI	AGTACT	1 cut(s)	1471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.