Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013055

Physical Location & Seq

Genomic Coordinates Forward (+)

19083980 .. 19088001

Gene Structure 4022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017611

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

ATGAGAGCTCAATTTTTCTGCATTATTCTACTATCCATCACTCTCGTCCATTCCGCTTCTTCTTCTGAGAATCAAATTAACCGAAGGATTCTACACCAACCGCTTTTTCCAGAGAGTTCGTCTCCTCCGCCGGAGCTTCTATCCCCGCCGCCTCCACCGCCTCCTCCGCCGGACAGTCCCGACCAGCCATTCTTCCATGAGCTGCCGACGGGACCTACGACTCCCGAGCAGAGCCAATCGCCGCCTGCAGTGTCGCAGAACAACACCGTTCCGTTGCCACAAGCGCCGTTGCCGACAAAGTCAACAAAGAAAGTGGCGGTGGCCGTCTCCGTCGGAATCGTCACTCTCGGAATGCTGTCGGCTCTCGCGTTTTTTCTCTACCGCCACCGAGTCAAGCACCCGTCGGAGACTCAGAAACTCGTCAATGGCGGAGGGAGCAGCTCGCAGCGGTTCGCGGACGATTCCAGAGCGGCGCCGTCGAGCTTCCTCTATATCGGCACTGTCGAGCCGAGCCAGAACTCCACGAGCAGCGACGCCATGAGTGGAGCGACGCCGGAAGTGAACCGGTCGCCGTACCGGAAACTCAACTCGATCAAGAGATCGGATCGGTACAGGCCAAGTCCCGAGTTGCAACCGTTGCCGCCGCTGGCGAAGCCTCCGCCTCCTCAGAACCCCGATTCGCCGTCGTCGCTGACGTCTTCCGACGACGAAGAAAGCCACGAGACGGCGTTTCACTCGCCGCAGTGCTCGTCGATTAGCTACGACGACAGCTATTACACGCCGAAGCAGAGCAGTATGTGTAGTACGGTCAGTAATGGCAGCAATCAGTCTCAGTCTCAGTCTCAGACTCTCAATACAAATTCGGTTCCTCACTCAAAACGGACTTCACCGAAATCTCGACTCTCAGTCTCTAACAGGGCTGCTCCGGCTCCACCGCCGCCTCCTCCGCCACCGCCAATGCCGGCAATTCACGACTTTCATCAAACAGTTTCGCATTCTCATAAGAAGCCAAAATTCTCAACCCCGCCACCACCGCCAAATATGAGTCTGCTTCAGTCAATAGCCAACCCGAGCCGCCAAGTACCTACAGCCCCGGTTCCACCTCCGCCGCCTCCGCCACCGTCACGAAGAATTGGGGATGATTCAGAAACAGTTGTTGATGCTAAGCCGACTCCAGTATCATCAAGGCCACAATTGTCATCCACATCAACCCCGAAAGGCTGGTTTGAGAATGACACGAGTAAAACCAAACCTCTTCACCGAGCTGAGAAAAGCTTAGGTTCTGCAGAGAGTTTCGAGAATGATGATTCCGGGGGAGCAAAGCCGAAGTTGAAGCCTCTGCACTGGGACAAAGTTCGAGCAACCTCTGATAGAGCTACAGTTTGGGACCAGCTGAAATCTAGCTCATTTCAATTAAATGAAGATATGATGGAGACTCTTTTCGGCTGCAATCCCGCGAATACGGTCCCAAAAGAACCTAGTACTACTACTAGAAGATCGGTTATGCCTCCTGTTGAGCAGGAAAACAGGGTTTTGGACCCCAAGAAGTCGCAGAACATAGCTATACTGTTAAGAGCACTAAATGTAGCAAGAGATGAGGTCGTTGAAGCACTTTCCGATGGTAACCCAGAAGGCTTGGGCGCCGAGCTTTTGGAGACTCTGGTTAAGATGGCACCGACAAAGGAAGAAGAAATTAAACTTCGAGAGTACCAGGGTGACATCTCAAAATTAGGGTCTGCTGAACGGTTTCTGAAGGCAGTGCTTGATATCCCATTTGCTTTTAAGAGAGTTGAGGCAATGCTATACAGAGCTAACTTTGATACAGAAGTGAAATACCTAAGGAAGTCTTTTCAAACGCTCGAGGAAGCAAGTGAAGAATTGAAGAACAGTCGATTATTCCTAAAACTCCTTGAAGCTGTTCTCAGGACTGGAAACCGAATGAATGTTGGGACCAACCGTGGTGATGCTAAAGCTTTCAAACTTGATACACTCTTAAAACTGGTCGACATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTTCAAGAGATTATAAGATCTGAAAGTCCAGGTTCTGAAACAAAGGAGAACATCAAGACAAAGGAAGGTGATTTCAAAAAGCAAGGATTGAAAATGGTGGCAGGGCTGAGCAAAGACCTTGGCAACGTCGCAAAAGCAGCAGGAATGGACTCAGACGTCCTAAGTAGCTATGTGTCAAAGCTTGCAATGGGGCTTGAGAAGGTCAGACTGGTCTTGCAGTATGACAAGGCAGATGTTGATGGAAAATTCTTCAACTCGATGAAGCTCTTTCTAAAAGAGGCTGAGGAGGAAATTCTTAGGATCAAGGCTGATGAAAGAAAGGCTTTATTTCTGGTGAAAGAGGTTACTCAATATTTCCATGGGGATACAGCAAAGGAGGAAGCCCATCCTTTCAGAATCTTCATGATCGTAAGAGATTTTCTAAAAGTATTGGACCATGTGTGCAAGGAAGTCGGGAATATGCAGGACAGAACACTGGTGGGTTCTGCTAGGTCATTCCGGATAGCTGCAACTGCTCCTCTACCAGTTCTTTCCAAGTATCACTTGAGACAAGAAGACACCTCGGACGACGACAGCTTTTCTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005819 GO:0005856 GO:0005886 GO:0008092 GO:0009524 GO:0015630 GO:0016020 GO:0030312 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

879

Amino Acids

96.64

Weight (kDa)

8.67

Isoelectric Point (pI)

57.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	440 - 827	1.2e-116	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67470
fragaria_vesca	FvH4_1g17500 FvH4_1g17500 FvH4_1g17500
malus_domestica	MD02G1184200.v1.1 MD15G1295600.v1.1
prunus_persica	Prupe.6G222200_v2.0.a1 Prupe.6G222200_v2.0.a1
pyrus_communis	pycom02g14940 pycom15g25850
rosa_chinensis	RchiOBHm_Chr2g0107731
rosa_laevigata	RLG00000017611
rosa_multiflora	Rmu_sc0009624.1_g000008
rosa_roxburghii	Rroxscaffold_2G00135990
rosa_rugosa	Rorug02G0147200
rosa_samantha	Rh2BG209400 Rh2CG201600
rosa_wichuraiana	Rw2G015550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2063
AasI	GACNNNNNNGTC	1 cut(s)	2204
AatII	GACGTC	2 cut(s)	698, 2208
AccB1I	GGYRCC	3 cut(s)	472, 1640, 1672
AccB7I	CCANNNNNTGG	1 cut(s)	2047
AccBSI	CCGCTC	1 cut(s)	470
AccI	GTMKAC	1 cut(s)	2004
AccII	CGCG	3 cut(s)	368, 455, 1457
AccIII	TCCGGA	1 cut(s)	2547
AclWI	GGATC	2 cut(s)	612, 2357
AcoI	YGGCCR	1 cut(s)	321
AcsI	RAATTY	4 cut(s)	859, 1013, 2294, 2340
AcuI	CTGAAG	2 cut(s)	1037, 1772
AcyI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1641, 2205
AdeI	CACNNNGTG	1 cut(s)	2047
AfaI	GTAC	6 cut(s)	575, 611, 805, 1083, 1483, 1709
AfiI	CCNNNNNNNGG	2 cut(s)	724, 2047
AgeI	ACCGGT	1 cut(s)	564
AhdI	GACNNNNNGTC	1 cut(s)	905
AjnI	CCWGG	2 cut(s)	1710, 2077
AjuI	GAANNNNNNNTTGG	2 cut(s)	90, 122
Alw21I	GWGCWC	3 cut(s)	10, 749, 1579
AlwI	GGATC	2 cut(s)	612, 2357
AlwNI	CAGNNNCTG	1 cut(s)	2084
Ama87I	CYCGRG	4 cut(s)	224, 623, 1069, 1859
Aor13HI	TCCGGA	1 cut(s)	2547
AoxI	GGCC	3 cut(s)	321, 614, 1187
ApeKI	GCWGC	9 cut(s)	202, 438, 445, 528, 819, 920, 1446, 2186, 2555
ApoI	RAATTY	4 cut(s)	859, 1013, 2294, 2340
ArsI	GACNNNNNNTTYG	2 cut(s)	1718, 1750
AsiGI	ACCGGT	1 cut(s)	564
Asp700I	GAANNNNTTC	2 cut(s)	1746, 1917
AspLEI	GCGC	3 cut(s)	286, 475, 1643
AspS9I	GGNCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
AsuC2I	CCSGG	2 cut(s)	1094, 1312
AsuHPI	GGTGA	6 cut(s)	879, 1250, 1727, 1973, 2129, 2395
AvaI	CYCGRG	4 cut(s)	224, 623, 1069, 1859
AvaII	GGWCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
AxyI	CCTNAGG	1 cut(s)	1838
BaeI	ACNNNNGTAYC	4 cut(s)	1161, 1194, 1812, 1845
BanI	GGYRCC	3 cut(s)	472, 1640, 1672
BanII	GRGCYC	1 cut(s)	10
BauI	CACGAG	3 cut(s)	523, 719, 1237
BbsI	GAAGAC	2 cut(s)	690, 2610
Bbv12I	GWGCWC	3 cut(s)	10, 749, 1579
BbvCI	CCTCAGC	1 cut(s)	2331
BbvI	GCAGC	9 cut(s)	189, 450, 457, 540, 831, 907, 1433, 2198, 2542
BccI	CCATC	7 cut(s)	44, 1423, 1613, 1663, 2015, 2282, 2442
BceAI	ACGGC	6 cut(s)	271, 308, 460, 556, 667, 741
BcgI	CGANNNNNNTGC	2 cut(s)	2482, 2516
BciT130I	CCWGG	2 cut(s)	1712, 2079
BciVI	GTATCC	1 cut(s)	2407
BcnI	CCSGG	2 cut(s)	1094, 1312
BfaI	CTAG	4 cut(s)	1401, 1479, 1491, 2538
BfmI	CTRYAG	4 cut(s)	246, 1086, 1284, 1377
BfoI	RGCGCY	3 cut(s)	287, 476, 1644
BfuI	GTATCC	1 cut(s)	2407
BglII	AGATCT	1 cut(s)	2066
BlpI	GCTNAGC	2 cut(s)	1164, 2156
BmcAI	AGTACT	1 cut(s)	1483
Bme1390I	CCNGG	4 cut(s)	1094, 1312, 1712, 2079
Bme18I	GGWCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
BmeRI	GACNNNNNGTC	1 cut(s)	905
BmeT110I	CYCGRG	4 cut(s)	224, 623, 1069, 1859
BmgT120I	GGNCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
BmrFI	CCNGG	4 cut(s)	1094, 1312, 1712, 2079
BmrI	ACTGGG	1 cut(s)	1354
BmsI	GCATC	2 cut(s)	1150, 1954
BmuI	ACTGGG	1 cut(s)	1354
BpiI	GAAGAC	2 cut(s)	690, 2610
BplI	GAGNNNNNCTC	2 cut(s)	106, 138
BpmI	CTGGAG	1 cut(s)	1158
Bpu10I	CCTNAGC	2 cut(s)	1276, 2331
Bpu1102I	GCTNAGC	2 cut(s)	1164, 2156
BpuEI	CTTGAG	2 cut(s)	2264, 2614
BpuMI	CCSGG	2 cut(s)	1094, 1312
BsaHI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1641, 2205
BsaJI	CCNNGG	7 cut(s)	1092, 1311, 1711, 1957, 2167, 2407, 2610
BsaWI	WCCGGW	3 cut(s)	564, 576, 2547
Bsc4I	CCNNNNNNNGG	2 cut(s)	724, 2047
Bse118I	RCCGGY	2 cut(s)	564, 961
Bse1I	ACTGG	7 cut(s)	1175, 1349, 1933, 2004, 2262, 2529, 2573
Bse21I	CCTNAGG	1 cut(s)	1838
Bse3DI	GCAATG	3 cut(s)	1803, 2033, 2241
BseAI	TCCGGA	1 cut(s)	2547
BseBI	CCWGG	2 cut(s)	1712, 2079
BseDI	CCNNGG	7 cut(s)	1092, 1311, 1711, 1957, 2167, 2407, 2610
BseGI	GGATG	3 cut(s)	1144, 1199, 2434
BseLI	CCNNNNNNNGG	2 cut(s)	724, 2047
BseMI	GCAATG	3 cut(s)	1803, 2033, 2241
BseNI	ACTGG	7 cut(s)	1175, 1349, 1933, 2004, 2262, 2529, 2573
BseRI	GAGGAG	6 cut(s)	114, 153, 654, 933, 2348, 2556
BseXI	GCAGC	9 cut(s)	189, 450, 457, 540, 831, 907, 1433, 2198, 2542
BsgI	GTGCAG	1 cut(s)	1325
Bsh1236I	CGCG	3 cut(s)	368, 455, 1457
Bsh1285I	CGRYCG	1 cut(s)	569
BshFI	GGCC	3 cut(s)	323, 616, 1189
BshNI	GGYRCC	3 cut(s)	472, 1640, 1672
BshTI	ACCGGT	1 cut(s)	564
BsiEI	CGRYCG	1 cut(s)	569
BsiHKAI	GWGCWC	3 cut(s)	10, 749, 1579
BsiHKCI	CYCGRG	4 cut(s)	224, 623, 1069, 1859
BslFI	GGGAC	7 cut(s)	162, 225, 606, 1361, 1400, 1451, 1963
BslI	CCNNNNNNNGG	2 cut(s)	724, 2047
BsmBI	CGTCTC	3 cut(s)	126, 331, 716
BsmFI	GGGAC	7 cut(s)	162, 225, 606, 1361, 1400, 1451, 1963
BsmI	GAATGC	2 cut(s)	357, 994
BsnI	GGCC	3 cut(s)	323, 616, 1189
BsoBI	CYCGRG	4 cut(s)	224, 623, 1069, 1859
Bsp1286I	GDGCHC	3 cut(s)	10, 749, 1579
Bsp13I	TCCGGA	1 cut(s)	2547
Bsp143I	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
Bsp1720I	GCTNAGC	2 cut(s)	1164, 2156
Bsp19I	CCATGG	1 cut(s)	2407
BspANI	GGCC	3 cut(s)	323, 616, 1189
BspEI	TCCGGA	1 cut(s)	2547
BspFNI	CGCG	3 cut(s)	368, 455, 1457
BspHI	TCATGA	1 cut(s)	2451
BspMAI	CTGCAG	2 cut(s)	250, 1288
BspPI	GGATC	2 cut(s)	612, 2357
BspT107I	GGYRCC	3 cut(s)	472, 1640, 1672
BsrBI	CCGCTC	1 cut(s)	470
BsrDI	GCAATG	3 cut(s)	1803, 2033, 2241
BsrFI	RCCGGY	2 cut(s)	564, 961
BsrI	ACTGG	7 cut(s)	1175, 1349, 1933, 2004, 2262, 2529, 2573
BssAI	RCCGGY	2 cut(s)	564, 961
BssECI	CCNNGG	7 cut(s)	1092, 1311, 1711, 1957, 2167, 2407, 2610
BssMI	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
BssNI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1641, 2205
BssSI	CACGAG	3 cut(s)	523, 719, 1237
BssT1I	CCWWGG	2 cut(s)	2167, 2407
Bst2BI	CACGAG	3 cut(s)	523, 719, 1237
Bst2UI	CCWGG	2 cut(s)	1712, 2079
Bst6I	CTCTTC	1 cut(s)	1260
BstACI	GRCGYC	6 cut(s)	473, 534, 551, 695, 1641, 2205
BstAPI	GCANNNNNTGC	1 cut(s)	637
BstC8I	GCNNGC	5 cut(s)	246, 443, 648, 963, 2232
BstDSI	CCRYGG	2 cut(s)	1957, 2407
BstEII	GGTNACC	1 cut(s)	1622
BstF5I	GGATG	3 cut(s)	1144, 1199, 2434
BstFNI	CGCG	3 cut(s)	368, 455, 1457
BstH2I	RGCGCY	3 cut(s)	287, 476, 1644
BstHHI	GCGC	3 cut(s)	286, 475, 1643
BstKTI	GATC	7 cut(s)	594, 602, 607, 1499, 2069, 2352, 2457
BstMBI	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
BstMCI	CGRYCG	1 cut(s)	569
BstNI	CCWGG	2 cut(s)	1712, 2079
BstPI	GGTNACC	1 cut(s)	1622
BstSCI	CCNGG	4 cut(s)	1092, 1310, 1710, 2077
BstSFI	CTRYAG	4 cut(s)	246, 1086, 1284, 1377
BstUI	CGCG	3 cut(s)	368, 455, 1457
BstV1I	GCAGC	9 cut(s)	189, 450, 457, 540, 831, 907, 1433, 2198, 2542
BstV2I	GAAGAC	2 cut(s)	690, 2610
BstX2I	RGATCY	1 cut(s)	2066
BstYI	RGATCY	1 cut(s)	2066
Bsu36I	CCTNAGG	1 cut(s)	1838
BsuI	GTATCC	1 cut(s)	2407
BsuRI	GGCC	3 cut(s)	323, 616, 1189
BtgI	CCRYGG	2 cut(s)	1957, 2407
BtsCI	GGATG	3 cut(s)	1144, 1199, 2434
BtsI	GCAGTG	3 cut(s)	255, 749, 1764
BtsIMutI	CAGTG	6 cut(s)	255, 498, 749, 1342, 1764, 2522
Cac8I	GCNNGC	5 cut(s)	246, 443, 648, 963, 2232
CaiI	CAGNNNCTG	1 cut(s)	2084
CciI	TCATGA	1 cut(s)	2451
CfoI	GCGC	3 cut(s)	286, 475, 1643
Cfr10I	RCCGGY	2 cut(s)	564, 961
Cfr13I	GGNCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
CseI	GACGC	2 cut(s)	542, 559
Csp6I	GTAC	6 cut(s)	574, 610, 804, 1082, 1482, 1708
CspAI	ACCGGT	1 cut(s)	564
CspCI	CAANNNNNGTGG	2 cut(s)	294, 329
CviAII	CATG	5 cut(s)	197, 538, 2408, 2452, 2486
CviQI	GTAC	6 cut(s)	574, 610, 804, 1082, 1482, 1708
DinI	GGCGCC	2 cut(s)	474, 1642
DpnI	GATC	7 cut(s)	593, 601, 606, 1498, 2068, 2351, 2456
DpnII	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
DraIII	CACNNNGTG	1 cut(s)	2047
DrdI	GACNNNNNNGTC	1 cut(s)	2204
DriI	GACNNNNNGTC	1 cut(s)	905
DseDI	GACNNNNNNGTC	1 cut(s)	2204
EaeI	YGGCCR	1 cut(s)	321
Eam1104I	CTCTTC	1 cut(s)	1260
Eam1105I	GACNNNNNGTC	1 cut(s)	905
EarI	CTCTTC	1 cut(s)	1260
EciI	GGCGGA	7 cut(s)	117, 156, 444, 648, 936, 1095, 1104
Ecl136II	GAGCTC	1 cut(s)	8
Eco130I	CCWWGG	2 cut(s)	2167, 2407
Eco24I	GRGCYC	1 cut(s)	10
Eco32I	GATATC	1 cut(s)	1768
Eco47I	GGWCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
Eco53kI	GAGCTC	1 cut(s)	8
Eco57I	CTGAAG	2 cut(s)	1037, 1772
Eco81I	CCTNAGG	1 cut(s)	1838
Eco88I	CYCGRG	4 cut(s)	224, 623, 1069, 1859
Eco91I	GGTNACC	1 cut(s)	1622
EcoICRI	GAGCTC	1 cut(s)	8
EcoO109I	RGGNCCY	1 cut(s)	212
EcoO65I	GGTNACC	1 cut(s)	1622
EcoRII	CCWGG	2 cut(s)	1710, 2077
EcoRV	GATATC	1 cut(s)	1768
EcoT14I	CCWWGG	2 cut(s)	2167, 2407
EcoT38I	GRGCYC	1 cut(s)	10
EgeI	GGCGCC	2 cut(s)	474, 1642
EheI	GGCGCC	2 cut(s)	474, 1642
ErhI	CCWWGG	2 cut(s)	2167, 2407
Esp3I	CGTCTC	3 cut(s)	126, 331, 716
FaeI	CATG	5 cut(s)	200, 541, 2411, 2455, 2489
FalI	AAGNNNNNCTT	6 cut(s)	1831, 1863, 2356, 2388, 2576, 2608
FaqI	GGGAC	7 cut(s)	162, 225, 606, 1361, 1400, 1451, 1963
FatI	CATG	5 cut(s)	196, 537, 2407, 2451, 2485
FauI	CCCGC	3 cut(s)	153, 1032, 1462
FblI	GTMKAC	1 cut(s)	2004
FokI	GGATG	3 cut(s)	1151, 1186, 2421
FriOI	GRGCYC	1 cut(s)	10
FspBI	CTAG	4 cut(s)	1401, 1479, 1491, 2538
GlaI	GCGC	3 cut(s)	285, 474, 1642
GsuI	CTGGAG	1 cut(s)	1158
HaeII	RGCGCY	3 cut(s)	287, 476, 1644
HaeIII	GGCC	3 cut(s)	323, 616, 1189
HgaI	GACGC	2 cut(s)	542, 559
HhaI	GCGC	3 cut(s)	286, 475, 1643
Hin1I	GRCGYC	6 cut(s)	473, 534, 551, 695, 1641, 2205
Hin1II	CATG	5 cut(s)	200, 541, 2411, 2455, 2489
Hin6I	GCGC	3 cut(s)	284, 473, 1641
HinP1I	GCGC	3 cut(s)	284, 473, 1641
HincII	GTYRAC	2 cut(s)	303, 2005
HindII	GTYRAC	2 cut(s)	303, 2005
HindIII	AAGCTT	3 cut(s)	1273, 1971, 2228
HphI	GGTGA	6 cut(s)	879, 1250, 1727, 1973, 2129, 2395
Hpy166II	GTNNAC	3 cut(s)	303, 562, 2005
Hpy8I	GTNNAC	3 cut(s)	303, 562, 2005
HpyAV	CCTTC	5 cut(s)	78, 1625, 1747, 2108, 2242
HpyCH4IV	ACGT	3 cut(s)	695, 2175, 2205
HpySE526I	ACGT	3 cut(s)	695, 2175, 2205
Hsp92I	GRCGYC	6 cut(s)	473, 534, 551, 695, 1641, 2205
Hsp92II	CATG	5 cut(s)	200, 541, 2411, 2455, 2489
HspAI	GCGC	3 cut(s)	284, 473, 1641
KasI	GGCGCC	2 cut(s)	472, 1640
Kpn2I	TCCGGA	1 cut(s)	2547
KroI	GCCGGC	1 cut(s)	961
KroNI	GCCGGC	1 cut(s)	963
Kzo9I	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
LmnI	GCTCC	8 cut(s)	133, 435, 545, 928, 934, 1316, 2043, 2569
Lsp1109I	GCAGC	9 cut(s)	189, 450, 457, 540, 831, 907, 1433, 2198, 2542
LweI	GCATC	2 cut(s)	1150, 1954
MaeI	CTAG	4 cut(s)	1401, 1479, 1491, 2538
MaeII	ACGT	3 cut(s)	695, 2175, 2205
MaeIII	GTNAC	5 cut(s)	340, 1122, 1622, 1715, 2392
MalI	GATC	7 cut(s)	593, 601, 606, 1498, 2068, 2351, 2456
MbiI	CCGCTC	1 cut(s)	470
MboI	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
MfeI	CAATTG	1 cut(s)	1193
MflI	RGATCY	1 cut(s)	2066
MhlI	GDGCHC	3 cut(s)	10, 749, 1579
Mly113I	GGCGCC	2 cut(s)	473, 1641
MmeI	TCCRAC	3 cut(s)	313, 384, 726
MroI	TCCGGA	1 cut(s)	2547
MroNI	GCCGGC	1 cut(s)	961
MroXI	GAANNNNTTC	2 cut(s)	1746, 1917
MseI	TTAA	7 cut(s)	78, 1415, 1571, 1665, 1695, 1782, 1994
MspA1I	CMGCKG	3 cut(s)	448, 646, 1393
MspR9I	CCNGG	4 cut(s)	1094, 1312, 1712, 2079
MunI	CAATTG	1 cut(s)	1193
Mva1269I	GAATGC	2 cut(s)	357, 994
MvaI	CCWGG	2 cut(s)	1712, 2079
MvnI	CGCG	3 cut(s)	368, 455, 1457
NaeI	GCCGGC	1 cut(s)	963
NarI	GGCGCC	2 cut(s)	473, 1641
NciI	CCSGG	2 cut(s)	1094, 1312
NcoI	CCATGG	1 cut(s)	2407
NdeII	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
NgoMIV	GCCGGC	1 cut(s)	961
NlaIII	CATG	5 cut(s)	200, 541, 2411, 2455, 2489
NmeAIII	GCCGAG	2 cut(s)	534, 1669
NmuCI	GTSAC	3 cut(s)	340, 1122, 1715
PaeR7I	CTCGAG	1 cut(s)	1859
PagI	TCATGA	1 cut(s)	2451
PcsI	WCGNNNNNNNCGW	4 cut(s)	215, 365, 501, 692
PctI	GAATGC	2 cut(s)	357, 994
PdiI	GCCGGC	1 cut(s)	963
PdmI	GAANNNNTTC	2 cut(s)	1746, 1917
PfeI	GAWTC	8 cut(s)	70, 88, 336, 461, 677, 1142, 1307, 2445
PflFI	GACNNNGTC	1 cut(s)	298
PflMI	CCANNNNNTGG	1 cut(s)	2047
PinAI	ACCGGT	1 cut(s)	564
PluTI	GGCGCC	2 cut(s)	476, 1644
PpuMI	RGGWCCY	1 cut(s)	212
PsiI	TTATAA	1 cut(s)	2063
Psp124BI	GAGCTC	1 cut(s)	10
Psp5II	RGGWCCY	1 cut(s)	212
Psp6I	CCWGG	2 cut(s)	1710, 2077
PspEI	GGTNACC	1 cut(s)	1622
PspGI	CCWGG	2 cut(s)	1710, 2077
PspPI	GGNCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
PspPPI	RGGWCCY	1 cut(s)	212
PspXI	VCTCGAGB	1 cut(s)	1859
PstI	CTGCAG	2 cut(s)	250, 1288
PstNI	CAGNNNCTG	1 cut(s)	2084
PsuI	RGATCY	1 cut(s)	2066
PsyI	GACNNNGTC	1 cut(s)	298
PvuII	CAGCTG	1 cut(s)	1393
RsaI	GTAC	6 cut(s)	575, 611, 805, 1083, 1483, 1709
RsaNI	GTAC	6 cut(s)	574, 610, 804, 1082, 1482, 1708
SacI	GAGCTC	1 cut(s)	10
SalI	GTCGAC	1 cut(s)	2003
SaqAI	TTAA	7 cut(s)	78, 1415, 1571, 1665, 1695, 1782, 1994
Sau3AI	GATC	7 cut(s)	591, 599, 604, 1496, 2066, 2349, 2454
Sau96I	GGNCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
ScaI	AGTACT	1 cut(s)	1483
ScrFI	CCNGG	4 cut(s)	1094, 1312, 1712, 2079
SduI	GDGCHC	3 cut(s)	10, 749, 1579
SfaNI	GCATC	2 cut(s)	1150, 1954
SfcI	CTRYAG	4 cut(s)	246, 1086, 1284, 1377
SfoI	GGCGCC	2 cut(s)	474, 1642
Sfr274I	CTCGAG	1 cut(s)	1859
SinI	GGWCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
SlaI	CTCGAG	1 cut(s)	1859
SmlI	CTYRAG	3 cut(s)	1859, 2243, 2593
SmoI	CTYRAG	3 cut(s)	1859, 2243, 2593
SspDI	GGCGCC	2 cut(s)	472, 1640
SspI	AATATT	1 cut(s)	2402
SspMI	CTAG	4 cut(s)	1401, 1479, 1491, 2538
SstI	GAGCTC	1 cut(s)	10
StyD4I	CCNGG	4 cut(s)	1092, 1310, 1710, 2077
StyI	CCWWGG	2 cut(s)	2167, 2407
TaiI	ACGT	3 cut(s)	698, 2178, 2208
TatI	WGTACW	1 cut(s)	1481
TauI	GCSGC	9 cut(s)	151, 244, 473, 643, 646, 742, 940, 1077, 1111
TfiI	GAWTC	8 cut(s)	70, 88, 336, 461, 677, 1142, 1307, 2445
Tru1I	TTAA	7 cut(s)	78, 1415, 1571, 1665, 1695, 1782, 1994
Tru9I	TTAA	7 cut(s)	78, 1415, 1571, 1665, 1695, 1782, 1994
TscAI	CASTG	6 cut(s)	255, 505, 749, 1349, 1764, 2529
TseFI	GTSAC	3 cut(s)	340, 1122, 1715
TseI	GCWGC	9 cut(s)	202, 438, 445, 528, 819, 920, 1446, 2186, 2555
Tsp45I	GTSAC	3 cut(s)	340, 1122, 1715
TspDTI	ATGAA	6 cut(s)	968, 1434, 1955, 2324, 2376, 2440
TspGWI	ACGGA	3 cut(s)	261, 319, 895
TspRI	CASTG	6 cut(s)	255, 505, 749, 1349, 1764, 2529
Tth111I	GACNNNGTC	1 cut(s)	298
Van91I	CCANNNNNTGG	1 cut(s)	2047
VpaK11BI	GGWCC	6 cut(s)	212, 1387, 1465, 1537, 1950, 2482
XapI	RAATTY	4 cut(s)	859, 1013, 2294, 2340
XhoI	CTCGAG	1 cut(s)	1859
XmiI	GTMKAC	1 cut(s)	2004
XmnI	GAANNNNTTC	2 cut(s)	1746, 1917
XspI	CTAG	4 cut(s)	1401, 1479, 1491, 2538
ZraI	GACGTC	2 cut(s)	696, 2206
ZrmI	AGTACT	1 cut(s)	1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.