Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0008666

Physical Location & Seq

Genomic Coordinates Forward (+)

5409031 .. 5413049

Gene Structure 4019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1077300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGAACAACTTCTGGGTTCCTATCTGTTTCTTGCTTCTCACTCTATCCATCTCCTCTCAAATCTCAACCGCTCAGCTCAGTCCAAGCGAAGTTCGAATCCTCTTCCAAGTGCAAAAGCTTCTCGAATACCCCGAACCTCTTCAGGGATGGACGAACTGGACCAACTTCTGCTTCCTCCCTTCCTCCCCCTCCCTCCGGATCGTCTGCACAAACAACCGCCTAACCGAATTAACCGTCACCGGAAACAAAACCAAAACCTCCCCTCCAAACCAGAGCACTCTGTCCAAATCCTTCTCCATCGACTCCTTGTTCACCGTCCTCACCAAGCTCTCCAACCTCAAATCCCTCTCATTGGTCTCCCTCGGCCTGTGGGGCCCGCTGCCGACGAAGATCAACCGGTTCTGGTCGCTCGAAACGCTCAACCTCAGCTCGAACTCCATCTCCGGCGAGATACCGGCCTCCCTCAGCTCGATCAAGAATCTCACGAGCATAAATTTGGCTGACAATCTCCTCAACGGAAGCGTTCCGGATCTCAGACCGCTAACATTTCTCCAAGAAATCAACCTCGGAAACAACACACTGGGTCCTGGATTTCCCTCTTTGGGAGACAGTATTCAAATCATCGTTCTCAGAAACAACTCCATGAGATCTGATATTCCGACAGGACTGAAGAACTTCGATCAGCTGACGAAACTGGACATCTCCTACAACAAATTTGTGGGTCACATCCCATCTTTCCTCCTCTCGCTGCCCTCCATCCAGTTCATCAATCTTTCCAAGAACGAGCTCAGTGGGGCCCTGTCATCCAACGTAACCTGCGGTAAAAACCTCATAGTTTTGGACATTTCCCAGAATTTTTTGATTGGGAAGCTGCCCACCTGCGTCGGATCGAACTCGAAGGCTTCGAACAGGACGGTTCTGGATTCGTGGAACTGTTTGTCGGGTGGGAACTCGAAGTACCAGCATCCGTATTCCTTTTGCCACAAGGAAGCTCTGGCCGTGAAGCCGCCGGCTGAAACTGCAGGGAAGAAGGAGGAGAACAGGACAAAGCTAGGTGTGTTGCTGGGTGTGATTGGTGGCATTGTGGGTGTTGCTGGTGTTGTTGGGTTGCTGGTTTTGGTCATCATCAAAAGGGCAGGGAAGAGGGAGGCAGAGGATCGATTTGACAGATCCATGGCGGAGAAAACCTCTGTCAGAAGCTCCCCAAAGCATAATATTAATGCAAGGCGTGTGCCGCAGATGATGAGGCTGCCGACACTCGGGCTCCCTCCGTATCGTGGTTTCACACTCGAAGAAATCGATGATGCAACGAACAATTTCGACGCTGCAAATTTGATGGCGGAAGGATCCCATGGACAGGTGTACAAAGGTTGGCTGAGAGATGGTTCACAGGTGCAAGTGAGATGCGTGAAGTTAAAGCAGAAGCAGTTGCCACAAAACTTGAACCAGAGCATGGAAGGCTTGTCAAAGATGAGGCATAGGCATTTGGTCAGCCTTATAGGACACTGCACTGTCACGTACCAGGACCATCCCACCGCATCTAGCACGGTATTTATTGTTCTCGAGAACATCACCAACGGGTCGTTGATAGACCATCTCACTGATTGGAGAAAGAAGGAATGGATGAAATGGCCGCAGAGAATGGCGGTTACTATTGGCATTGCGAGGGGAGTCCAGTTCTTGCACACCGGCGTGGCTCCCGGGATCTTTGGAAACAATTTGAAGATAGAGAACATATTGTTGGATGAGAGTGTTTCTGCCAAAATCAGCAACTACAATCTTCCGTTGCCATTTCAGGTTGGTTCAGAGGATCCTCGTAATGGACAAGGGATTAGCAGTAATTCCCATCTGAACAGCGCCGAAGCCGAGAAGGAGGATATTTACCAGCTGGGCATTATTCTGCTTCAAGTTCTTACTGGTAGATTGATCAAATCAGCTACTGAATTGGATGAGCTTAGGGTTCAGTTAGAAAAGGGCTTGATGGAAGGACCATCGACACTACGAGAAATCGTAGATTCGTCGATGATGGGAAGTTTTGCGTACCAGTCGCTGAAGACAGCAGTTGAAATCACAGTCAATTGTTTGAGCAGAGATCCAAGCAAGCGTCCTTCGATAGATAATGTTCTTTGGAATTTGCAGTATTCGATTCAAGTTCAAGAGGGATGGACTAGCAGTGGAAACCTCAGCGCACAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

733

Amino Acids

80.64

Weight (kDa)

9.08

Isoelectric Point (pI)

39.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	445 - 709	7.8e-16	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	446 - 709	5.4e-18	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14390 AT2G02780 AT2G02780 AT2G02780
fragaria_vesca	FvH4_4g31730 FvH4_4g31730
malus_domestica	MD13G1077200.v1.1 MD16G1077300.v1.1
prunus_persica	Prupe.1G269800_v2.0.a1
pyrus_communis	pycom13g06730 pycom16g06660
rosa_chinensis	RchiOBHm_Chr4g0440331
rosa_laevigata	RLG00000006191
rosa_multiflora	Rmu_co8366655.1_g000001 Rmu_co8382523.1_g000001 Rmu_sc0001685.1_g000042
rosa_roxburghii	Rroxscaffold_5G00381210
rosa_rugosa	Rorug04G0325700
rosa_samantha	Rh4AG376600 Rh4BG389600 Rh4CG404400 Rh4DG383300
rosa_wichuraiana	Rw4G032240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	887
Acc36I	ACCTGC	2 cut(s)	824, 887
AccB7I	CCANNNNNTGG	1 cut(s)	1453
AccBSI	CCGCTC	1 cut(s)	71
AccIII	TCCGGA	2 cut(s)	195, 526
AcoI	YGGCCR	2 cut(s)	996, 1631
AcsI	RAATTY	5 cut(s)	493, 713, 853, 1330, 2131
AcuI	CTGAAG	3 cut(s)	125, 689, 2072
AfaI	GTAC	4 cut(s)	959, 1364, 1520, 2042
AfiI	CCNNNNNNNGG	9 cut(s)	143, 195, 352, 602, 1259, 1277, 1357, 1453, 1820
AgeI	ACCGGT	1 cut(s)	396
AgsI	TTSAA	7 cut(s)	617, 1444, 1723, 1907, 2066, 2150, 2156
AjnI	CCWGG	2 cut(s)	586, 1521
AjuI	GAANNNNNNNTTGG	4 cut(s)	155, 187, 1724, 1756
AleI	CACNNNNGTG	1 cut(s)	1691
AloI	GAACNNNNNNTCC	2 cut(s)	425, 457
Alw21I	GWGCWC	2 cut(s)	278, 789
Alw26I	GTCTC	2 cut(s)	361, 600
AlwNI	CAGNNNCTG	2 cut(s)	1940, 2050
Ama87I	CYCGRG	3 cut(s)	1259, 1562, 1700
Aor13HI	TCCGGA	2 cut(s)	195, 526
AoxI	GGCC	6 cut(s)	364, 373, 456, 795, 996, 1631
ApaI	GGGCCC	2 cut(s)	377, 799
ApeKI	GCWGC	5 cut(s)	379, 748, 871, 1249, 1325
ApoI	RAATTY	5 cut(s)	493, 713, 853, 1330, 2131
ArsI	GACNNNNNNTTYG	2 cut(s)	219, 251
AseI	ATTAAT	1 cut(s)	1218
AsiGI	ACCGGT	1 cut(s)	396
Asp700I	GAANNNNTTC	4 cut(s)	8, 138, 674, 1316
AspLEI	GCGC	2 cut(s)	1859, 2189
AspS9I	GGNCC	8 cut(s)	159, 373, 374, 584, 795, 796, 1525, 1988
AsuC2I	CCSGG	2 cut(s)	1701, 1702
AsuHPI	GGTGA	4 cut(s)	229, 304, 313, 1564
AsuII	TTCGAA	2 cut(s)	94, 905
AvaI	CYCGRG	3 cut(s)	1259, 1562, 1700
AvaII	GGWCC	4 cut(s)	159, 584, 1525, 1988
BaeGI	GKGCMC	2 cut(s)	377, 799
BamHI	GGATCC	2 cut(s)	1346, 1810
BanII	GRGCYC	4 cut(s)	377, 789, 799, 1266
BauI	CACGAG	1 cut(s)	484
BbsI	GAAGAC	1 cut(s)	2060
Bbv12I	GWGCWC	2 cut(s)	278, 789
BbvCI	CCTCAGC	3 cut(s)	425, 464, 2183
BbvI	GCAGC	5 cut(s)	366, 735, 858, 1236, 1312
BceAI	ACGGC	1 cut(s)	983
BciT130I	CCWGG	2 cut(s)	588, 1523
BclI	TGATCA	1 cut(s)	1926
BcnI	CCSGG	2 cut(s)	1701, 1702
BcoDI	GTCTC	2 cut(s)	361, 600
BfaI	CTAG	3 cut(s)	1052, 1542, 2169
BfmI	CTRYAG	1 cut(s)	1020
BfoI	RGCGCY	1 cut(s)	1860
BfuAI	ACCTGC	2 cut(s)	824, 887
BglI	GCCNNNNNGGC	1 cut(s)	372
BglII	AGATCT	1 cut(s)	647
BisI	GCNGC	8 cut(s)	380, 749, 872, 1007, 1235, 1250, 1326, 1634
BlpI	GCTNAGC	1 cut(s)	72
BlsI	GCNGC	8 cut(s)	381, 750, 873, 1008, 1236, 1251, 1327, 1635
Bme1390I	CCNGG	4 cut(s)	588, 1523, 1701, 1702
Bme18I	GGWCC	4 cut(s)	159, 584, 1525, 1988
BmeT110I	CYCGRG	3 cut(s)	1259, 1562, 1700
BmgT120I	GGNCC	8 cut(s)	159, 373, 374, 584, 795, 796, 1525, 1988
BmrFI	CCNGG	4 cut(s)	588, 1523, 1701, 1702
BmrI	ACTGGG	1 cut(s)	590
BmsI	GCATC	4 cut(s)	973, 1294, 1394, 1547
BmuI	ACTGGG	1 cut(s)	590
BpiI	GAAGAC	1 cut(s)	2060
BplI	GAGNNNNNCTC	2 cut(s)	1172, 1204
Bpu10I	CCTNAGC	4 cut(s)	425, 464, 1955, 2183
Bpu1102I	GCTNAGC	1 cut(s)	72
Bpu14I	TTCGAA	2 cut(s)	94, 905
BpuMI	CCSGG	2 cut(s)	1701, 1702
Bsa29I	ATCGAT	2 cut(s)	1159, 1299
BsaAI	YACGTR	1 cut(s)	1518
BsaI	GGTCTC	1 cut(s)	361
BsaJI	CCNNGG	5 cut(s)	361, 565, 1173, 1351, 1700
BsaWI	WCCGGW	4 cut(s)	195, 239, 396, 526
BsaXI	ACNNNNNCTCC	6 cut(s)	247, 277, 425, 455, 1248, 1278
Bsc4I	CCNNNNNNNGG	9 cut(s)	143, 195, 352, 602, 1259, 1277, 1357, 1453, 1820
Bse118I	RCCGGY	4 cut(s)	396, 454, 1009, 1688
Bse1I	ACTGG	7 cut(s)	161, 585, 699, 760, 1675, 1921, 2044
Bse3DI	GCAATG	1 cut(s)	1659
BseAI	TCCGGA	2 cut(s)	195, 526
BseBI	CCWGG	2 cut(s)	588, 1523
BseCI	ATCGAT	2 cut(s)	1159, 1299
BseDI	CCNNGG	5 cut(s)	361, 565, 1173, 1351, 1700
BseLI	CCNNNNNNNGG	9 cut(s)	143, 195, 352, 602, 1259, 1277, 1357, 1453, 1820
BseMI	GCAATG	1 cut(s)	1659
BseMII	CTCAG	9 cut(s)	86, 91, 439, 478, 547, 643, 802, 1367, 2197
BseNI	ACTGG	7 cut(s)	161, 585, 699, 760, 1675, 1921, 2044
BseRI	GAGGAG	4 cut(s)	43, 500, 731, 1049
BseSI	GKGCMC	2 cut(s)	377, 799
BseXI	GCAGC	5 cut(s)	366, 735, 858, 1236, 1312
BseYI	CCCAGC	2 cut(s)	1063, 1888
BsgI	GTGCAG	2 cut(s)	190, 1492
BshFI	GGCC	6 cut(s)	366, 375, 458, 797, 998, 1633
BshTI	ACCGGT	1 cut(s)	396
BshVI	ATCGAT	2 cut(s)	1159, 1299
BsiHKAI	GWGCWC	2 cut(s)	278, 789
BsiHKCI	CYCGRG	3 cut(s)	1259, 1562, 1700
BsiSI	CCGG	9 cut(s)	196, 240, 397, 444, 455, 527, 1010, 1689, 1701
BslI	CCNNNNNNNGG	9 cut(s)	143, 195, 352, 602, 1259, 1277, 1357, 1453, 1820
BsmAI	GTCTC	2 cut(s)	361, 600
BsnI	GGCC	6 cut(s)	366, 375, 458, 797, 998, 1633
Bso31I	GGTCTC	1 cut(s)	361
BsoBI	CYCGRG	3 cut(s)	1259, 1562, 1700
Bsp119I	TTCGAA	2 cut(s)	94, 905
Bsp120I	GGGCCC	2 cut(s)	373, 795
Bsp1286I	GDGCHC	5 cut(s)	278, 377, 789, 799, 1266
Bsp13I	TCCGGA	2 cut(s)	195, 526
Bsp1407I	TGTACA	1 cut(s)	1362
Bsp1720I	GCTNAGC	1 cut(s)	72
Bsp19I	CCATGG	2 cut(s)	1173, 1351
BspANI	GGCC	6 cut(s)	366, 375, 458, 797, 998, 1633
BspCNI	CTCAG	9 cut(s)	85, 90, 438, 477, 546, 642, 801, 1368, 2196
BspDI	ATCGAT	2 cut(s)	1159, 1299
BspEI	TCCGGA	2 cut(s)	195, 526
BspMAI	CTGCAG	1 cut(s)	1024
BspMI	ACCTGC	2 cut(s)	824, 887
BspT104I	TTCGAA	2 cut(s)	94, 905
BspTNI	GGTCTC	1 cut(s)	361
BsrBI	CCGCTC	1 cut(s)	71
BsrDI	GCAATG	1 cut(s)	1659
BsrFI	RCCGGY	4 cut(s)	396, 454, 1009, 1688
BsrGI	TGTACA	1 cut(s)	1362
BsrI	ACTGG	7 cut(s)	161, 585, 699, 760, 1675, 1921, 2044
BssAI	RCCGGY	4 cut(s)	396, 454, 1009, 1688
BssECI	CCNNGG	5 cut(s)	361, 565, 1173, 1351, 1700
BssSI	CACGAG	1 cut(s)	484
BssT1I	CCWWGG	2 cut(s)	1173, 1351
Bst2BI	CACGAG	1 cut(s)	484
Bst2UI	CCWGG	2 cut(s)	588, 1523
Bst4CI	ACNGT	8 cut(s)	235, 316, 611, 916, 935, 1513, 1549, 2074
Bst6I	CTCTTC	3 cut(s)	107, 144, 1136
BstAUI	TGTACA	1 cut(s)	1362
BstBAI	YACGTR	1 cut(s)	1518
BstBI	TTCGAA	2 cut(s)	94, 905
BstC8I	GCNNGC	3 cut(s)	377, 1011, 2102
BstDSI	CCRYGG	2 cut(s)	1173, 1351
BstH2I	RGCGCY	1 cut(s)	1860
BstHHI	GCGC	2 cut(s)	1859, 2189
BstMAI	GTCTC	2 cut(s)	361, 600
BstMWI	GCNNNNNNNGC	5 cut(s)	372, 415, 1019, 1234, 1458
BstNI	CCWGG	2 cut(s)	588, 1523
BstSCI	CCNGG	4 cut(s)	586, 1521, 1699, 1700
BstSFI	CTRYAG	1 cut(s)	1020
BstSLI	GKGCMC	2 cut(s)	377, 799
BstV1I	GCAGC	5 cut(s)	366, 735, 858, 1236, 1312
BstV2I	GAAGAC	1 cut(s)	2060
BstX2I	RGATCY	7 cut(s)	529, 647, 1169, 1346, 1704, 1810, 2092
BstYI	RGATCY	7 cut(s)	529, 647, 1169, 1346, 1704, 1810, 2092
Bsu15I	ATCGAT	2 cut(s)	1159, 1299
BsuRI	GGCC	6 cut(s)	366, 375, 458, 797, 998, 1633
BsuTUI	ATCGAT	2 cut(s)	1159, 1299
BtgI	CCRYGG	2 cut(s)	1173, 1351
BtsI	GCAGTG	2 cut(s)	1504, 2179
BtsIMutI	CAGTG	6 cut(s)	578, 796, 1504, 1509, 1599, 2179
BveI	ACCTGC	2 cut(s)	824, 887
Cac8I	GCNNGC	3 cut(s)	377, 1011, 2102
CaiI	CAGNNNCTG	2 cut(s)	1940, 2050
CfoI	GCGC	2 cut(s)	1859, 2189
Cfr10I	RCCGGY	4 cut(s)	396, 454, 1009, 1688
Cfr13I	GGNCC	8 cut(s)	159, 373, 374, 584, 795, 796, 1525, 1988
Cfr9I	CCCGGG	1 cut(s)	1700
ClaI	ATCGAT	2 cut(s)	1159, 1299
CseI	GACGC	3 cut(s)	871, 1331, 2093
Csp6I	GTAC	4 cut(s)	958, 1363, 1519, 2041
CspAI	ACCGGT	1 cut(s)	396
CspCI	CAANNNNNGTGG	2 cut(s)	1422, 1457
CviAII	CATG	4 cut(s)	643, 1174, 1352, 1453
CviQI	GTAC	4 cut(s)	958, 1363, 1519, 2041
EaeI	YGGCCR	2 cut(s)	996, 1631
Eam1104I	CTCTTC	3 cut(s)	107, 144, 1136
EarI	CTCTTC	3 cut(s)	107, 144, 1136
EciI	GGCGGA	2 cut(s)	1193, 1355
Ecl136II	GAGCTC	1 cut(s)	787
Eco130I	CCWWGG	2 cut(s)	1173, 1351
Eco24I	GRGCYC	4 cut(s)	377, 789, 799, 1266
Eco31I	GGTCTC	1 cut(s)	361
Eco47I	GGWCC	4 cut(s)	159, 584, 1525, 1988
Eco53kI	GAGCTC	1 cut(s)	787
Eco57I	CTGAAG	3 cut(s)	125, 689, 2072
Eco88I	CYCGRG	3 cut(s)	1259, 1562, 1700
EcoICRI	GAGCTC	1 cut(s)	787
EcoO109I	RGGNCCY	4 cut(s)	373, 584, 795, 796
EcoRII	CCWGG	2 cut(s)	586, 1521
EcoT14I	CCWWGG	2 cut(s)	1173, 1351
EcoT38I	GRGCYC	4 cut(s)	377, 789, 799, 1266
ErhI	CCWWGG	2 cut(s)	1173, 1351
FaeI	CATG	4 cut(s)	646, 1177, 1355, 1456
FatI	CATG	4 cut(s)	642, 1173, 1351, 1452
FauI	CCCGC	1 cut(s)	384
FbaI	TGATCA	1 cut(s)	1926
Fnu4HI	GCNGC	8 cut(s)	380, 749, 872, 1007, 1235, 1250, 1326, 1634
FriOI	GRGCYC	4 cut(s)	377, 789, 799, 1266
Fsp4HI	GCNGC	8 cut(s)	380, 749, 872, 1007, 1235, 1250, 1326, 1634
FspBI	CTAG	3 cut(s)	1052, 1542, 2169
GlaI	GCGC	2 cut(s)	1858, 2188
GluI	GCNGC	8 cut(s)	380, 749, 872, 1007, 1235, 1250, 1326, 1634
GsaI	CCCAGC	2 cut(s)	1067, 1892
HaeII	RGCGCY	1 cut(s)	1860
HaeIII	GGCC	6 cut(s)	366, 375, 458, 797, 998, 1633
HapII	CCGG	9 cut(s)	196, 240, 397, 444, 455, 527, 1010, 1689, 1701
HgaI	GACGC	3 cut(s)	871, 1331, 2093
HhaI	GCGC	2 cut(s)	1859, 2189
Hin1II	CATG	4 cut(s)	646, 1177, 1355, 1456
Hin6I	GCGC	2 cut(s)	1857, 2187
HinP1I	GCGC	2 cut(s)	1857, 2187
HindIII	AAGCTT	1 cut(s)	116
HinfI	GANTC	7 cut(s)	96, 302, 478, 923, 1671, 2015, 2146
HpaII	CCGG	9 cut(s)	196, 240, 397, 444, 455, 527, 1010, 1689, 1701
HphI	GGTGA	4 cut(s)	229, 304, 313, 1564
Hpy166II	GTNNAC	3 cut(s)	312, 1363, 1388
Hpy188I	TCNGA	9 cut(s)	536, 569, 632, 652, 660, 887, 1196, 1807, 1851
Hpy188III	TCNNGA	9 cut(s)	122, 196, 475, 484, 527, 920, 1562, 1564, 2156
Hpy8I	GTNNAC	3 cut(s)	312, 1363, 1388
Hpy99I	CGWCG	4 cut(s)	388, 887, 1325, 2023
HpyCH4III	ACNGT	8 cut(s)	235, 316, 611, 916, 935, 1513, 1549, 2074
HpyCH4IV	ACGT	2 cut(s)	810, 1517
HpyF10VI	GCNNNNNNNGC	5 cut(s)	372, 415, 1019, 1234, 1458
HpySE526I	ACGT	2 cut(s)	810, 1517
Hsp92II	CATG	4 cut(s)	646, 1177, 1355, 1456
HspAI	GCGC	2 cut(s)	1857, 2187
Kpn2I	TCCGGA	2 cut(s)	195, 526
KroI	GCCGGC	1 cut(s)	1009
KroNI	GCCGGC	1 cut(s)	1011
Ksp22I	TGATCA	1 cut(s)	1926
LmnI	GCTCC	3 cut(s)	1205, 1269, 1702
Lsp1109I	GCAGC	5 cut(s)	366, 735, 858, 1236, 1312
LweI	GCATC	4 cut(s)	973, 1294, 1394, 1547
MaeI	CTAG	3 cut(s)	1052, 1542, 2169
MaeII	ACGT	2 cut(s)	810, 1517
MaeIII	GTNAC	5 cut(s)	235, 722, 811, 1513, 1648
MbiI	CCGCTC	1 cut(s)	71
MfeI	CAATTG	1 cut(s)	2077
MflI	RGATCY	7 cut(s)	529, 647, 1169, 1346, 1704, 1810, 2092
MhlI	GDGCHC	5 cut(s)	278, 377, 789, 799, 1266
MlyI	GAGTC	2 cut(s)	296, 1680
MmeI	TCCRAC	5 cut(s)	357, 683, 831, 865, 1722
MroI	TCCGGA	2 cut(s)	195, 526
MroNI	GCCGGC	1 cut(s)	1009
MroXI	GAANNNNTTC	4 cut(s)	8, 138, 674, 1316
MseI	TTAA	3 cut(s)	230, 1218, 1415
MslI	CAYNNNNRTG	1 cut(s)	1691
MspA1I	CMGCKG	3 cut(s)	379, 685, 1888
MspI	CCGG	9 cut(s)	196, 240, 397, 444, 455, 527, 1010, 1689, 1701
MspR9I	CCNGG	4 cut(s)	588, 1523, 1701, 1702
MunI	CAATTG	1 cut(s)	2077
MvaI	CCWGG	2 cut(s)	588, 1523
MwoI	GCNNNNNNNGC	5 cut(s)	372, 415, 1019, 1234, 1458
NaeI	GCCGGC	1 cut(s)	1011
NciI	CCSGG	2 cut(s)	1701, 1702
NcoI	CCATGG	2 cut(s)	1173, 1351
NgoMIV	GCCGGC	1 cut(s)	1009
NlaIII	CATG	4 cut(s)	646, 1177, 1355, 1456
NmeAIII	GCCGAG	2 cut(s)	342, 1891
NmuCI	GTSAC	3 cut(s)	235, 722, 1513
NspV	TTCGAA	2 cut(s)	94, 905
OliI	CACNNNNGTG	1 cut(s)	1691
PaeR7I	CTCGAG	1 cut(s)	1562
PaqCI	CACCTGC	1 cut(s)	887
PcsI	WCGNNNNNNNCGW	3 cut(s)	129, 902, 1296
PdiI	GCCGGC	1 cut(s)	1011
PdmI	GAANNNNTTC	4 cut(s)	8, 138, 674, 1316
PfeI	GAWTC	5 cut(s)	96, 478, 923, 2015, 2146
PflMI	CCANNNNNTGG	1 cut(s)	1453
PfoI	TCCNGGA	1 cut(s)	586
PinAI	ACCGGT	1 cut(s)	396
PkrI	GCNGC	8 cut(s)	381, 750, 873, 1008, 1236, 1251, 1327, 1635
PleI	GAGTC	2 cut(s)	296, 1679
PpsI	GAGTC	2 cut(s)	296, 1679
Ppu21I	YACGTR	1 cut(s)	1518
PpuMI	RGGWCCY	1 cut(s)	584
PshBI	ATTAAT	1 cut(s)	1218
Psp124BI	GAGCTC	1 cut(s)	789
Psp5II	RGGWCCY	1 cut(s)	584
Psp6I	CCWGG	2 cut(s)	586, 1521
PspFI	CCCAGC	2 cut(s)	1063, 1888
PspGI	CCWGG	2 cut(s)	586, 1521
PspOMI	GGGCCC	2 cut(s)	373, 795
PspPI	GGNCC	8 cut(s)	159, 373, 374, 584, 795, 796, 1525, 1988
PspPPI	RGGWCCY	1 cut(s)	584
PsrI	GAACNNNNNNTAC	4 cut(s)	941, 973, 1542, 1574
PstI	CTGCAG	1 cut(s)	1024
PstNI	CAGNNNCTG	2 cut(s)	1940, 2050
PsuI	RGATCY	7 cut(s)	529, 647, 1169, 1346, 1704, 1810, 2092
PvuII	CAGCTG	2 cut(s)	685, 1888
RsaI	GTAC	4 cut(s)	959, 1364, 1520, 2042
RsaNI	GTAC	4 cut(s)	958, 1363, 1519, 2041
RseI	CAYNNNNRTG	1 cut(s)	1691
SacI	GAGCTC	1 cut(s)	789
SaqAI	TTAA	3 cut(s)	230, 1218, 1415
SatI	GCNGC	8 cut(s)	380, 749, 872, 1007, 1235, 1250, 1326, 1634
Sau96I	GGNCC	8 cut(s)	159, 373, 374, 584, 795, 796, 1525, 1988
SchI	GAGTC	2 cut(s)	296, 1680
ScrFI	CCNGG	4 cut(s)	588, 1523, 1701, 1702
SduI	GDGCHC	5 cut(s)	278, 377, 789, 799, 1266
SfaNI	GCATC	4 cut(s)	973, 1294, 1394, 1547
SfcI	CTRYAG	1 cut(s)	1020
SfiI	GGCCNNNNNGGCC	1 cut(s)	372
Sfr274I	CTCGAG	1 cut(s)	1562
SfuI	TTCGAA	2 cut(s)	94, 905
SgrAI	CRCCGGYG	1 cut(s)	1688
SinI	GGWCC	4 cut(s)	159, 584, 1525, 1988
SlaI	CTCGAG	1 cut(s)	1562
SmaI	CCCGGG	1 cut(s)	1702
SmiMI	CAYNNNNRTG	1 cut(s)	1691
SmlI	CTYRAG	1 cut(s)	1562
SmoI	CTYRAG	1 cut(s)	1562
SspI	AATATT	1 cut(s)	1216
SspMI	CTAG	3 cut(s)	1052, 1542, 2169
SstI	GAGCTC	1 cut(s)	789
StyD4I	CCNGG	4 cut(s)	586, 1521, 1699, 1700
StyI	CCWWGG	2 cut(s)	1173, 1351
TaaI	ACNGT	8 cut(s)	235, 316, 611, 916, 935, 1513, 1549, 2074
TaiI	ACGT	2 cut(s)	813, 1520
TatI	WGTACW	1 cut(s)	1362
TauI	GCSGC	3 cut(s)	1009, 1237, 1636
TfiI	GAWTC	5 cut(s)	96, 478, 923, 2015, 2146
Tru1I	TTAA	3 cut(s)	230, 1218, 1415
Tru9I	TTAA	3 cut(s)	230, 1218, 1415
TscAI	CASTG	6 cut(s)	585, 796, 1511, 1516, 1606, 2179
TseFI	GTSAC	3 cut(s)	235, 722, 1513
TseI	GCWGC	5 cut(s)	379, 748, 871, 1249, 1325
Tsp45I	GTSAC	3 cut(s)	235, 722, 1513
TspDTI	ATGAA	3 cut(s)	17, 754, 1640
TspGWI	ACGGA	4 cut(s)	531, 957, 1260, 1773
TspMI	CCCGGG	1 cut(s)	1700
TspRI	CASTG	6 cut(s)	585, 796, 1511, 1516, 1606, 2179
Van91I	CCANNNNNTGG	1 cut(s)	1453
VpaK11BI	GGWCC	4 cut(s)	159, 584, 1525, 1988
VspI	ATTAAT	1 cut(s)	1218
XapI	RAATTY	5 cut(s)	493, 713, 853, 1330, 2131
XhoI	CTCGAG	1 cut(s)	1562
XmaI	CCCGGG	1 cut(s)	1700
XmnI	GAANNNNTTC	4 cut(s)	8, 138, 674, 1316
XspI	CTAG	3 cut(s)	1052, 1542, 2169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.