expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27850 |
| fragaria_vesca | FvH4_4g24320 FvH4_4g24320 FvH4_4g24320 FvH4_4g24320 FvH4_4g24320 |
| malus_domestica | MD13G1112200.v1.1 MD16G1111800.v1.1 |
| prunus_persica | Prupe.1G233200_v2.0.a1 Prupe.1G233200_v2.0.a1 |
| pyrus_communis | pycom13g09760 pycom16g09480 |
| rosa_chinensis | RchiOBHm_Chr4g0431121 |
| rosa_laevigata | RLG00000006923 |
| rosa_multiflora | Rmu_sc0005258.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00372710 |
| rosa_rugosa | Rorug04G0248400 Rorug04G0248500.1 |
| rosa_samantha | Rh4AG304800 Rh4BG312000 Rh4CG328300 Rh4DG308600 |
| rosa_wichuraiana | Rw4G026490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 393 |
| Acc16I | TGCGCA | 1 cut(s) | 1308 |
| Acc36I | ACCTGC | 1 cut(s) | 1719 |
| AccB1I | GGYRCC | 1 cut(s) | 2689 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3367 |
| AccBSI | CCGCTC | 1 cut(s) | 1255 |
| AccI | GTMKAC | 4 cut(s) | 562, 677, 3499, 3630 |
| AccII | CGCG | 1 cut(s) | 250 |
| AciI | CCGC | 3 cut(s) | 356, 1253, 3535 |
| AclWI | GGATC | 6 cut(s) | 1185, 1227, 1927, 1973, 2581, 2582 |
| AcoI | YGGCCR | 4 cut(s) | 524, 1250, 1425, 2332 |
| AcsI | RAATTY | 1 cut(s) | 2140 |
| AcuI | CTGAAG | 8 cut(s) | 149, 1671, 1848, 2706, 2898, 3057, 3159, 3195 |
| AcvI | CACGTG | 1 cut(s) | 1538 |
| AcyI | GRCGYC | 1 cut(s) | 2690 |
| AfaI | GTAC | 8 cut(s) | 505, 537, 850, 1114, 1375, 1576, 2731, 3122 |
| AflII | CTTAAG | 2 cut(s) | 475, 2210 |
| AflIII | ACRYGT | 1 cut(s) | 248 |
| AhlI | ACTAGT | 2 cut(s) | 1376, 3233 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1458, 1490, 2414, 2446 |
| Alw21I | GWGCWC | 2 cut(s) | 29, 704 |
| Alw26I | GTCTC | 7 cut(s) | 580, 622, 954, 990, 2384, 2480, 3035 |
| AlwI | GGATC | 6 cut(s) | 1185, 1227, 1927, 1973, 2581, 2582 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3551 |
| Ama87I | CYCGRG | 1 cut(s) | 141 |
| AoxI | GGCC | 8 cut(s) | 524, 1137, 1151, 1250, 1425, 1984, 2332, 3369 |
| ApeKI | GCWGC | 7 cut(s) | 1350, 2401, 2415, 2497, 3348, 3380, 3483 |
| ApoI | RAATTY | 1 cut(s) | 2140 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2599, 2631 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3426 |
| AspLEI | GCGC | 4 cut(s) | 86, 1309, 2692, 3152 |
| AspS9I | GGNCC | 2 cut(s) | 708, 1087 |
| AsuC2I | CCSGG | 1 cut(s) | 2131 |
| AvaI | CYCGRG | 1 cut(s) | 141 |
| AvaII | GGWCC | 2 cut(s) | 708, 1087 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1365, 1398 |
| BalI | TGGCCA | 2 cut(s) | 1427, 2334 |
| BanI | GGYRCC | 1 cut(s) | 2689 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 709, 741, 1096, 1128 |
| BauI | CACGAG | 1 cut(s) | 2394 |
| BbrPI | CACGTG | 1 cut(s) | 1538 |
| BbsI | GAAGAC | 2 cut(s) | 1512, 1704 |
| Bbv12I | GWGCWC | 2 cut(s) | 29, 704 |
| BbvCI | CCTCAGC | 1 cut(s) | 2778 |
| BbvI | GCAGC | 7 cut(s) | 1362, 2413, 2427, 2509, 3360, 3367, 3495 |
| BceAI | ACGGC | 3 cut(s) | 539, 1567, 3649 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1581, 1615, 2340, 2374 |
| BclI | TGATCA | 3 cut(s) | 1405, 3063, 3097 |
| BcnI | CCSGG | 1 cut(s) | 2131 |
| BcoDI | GTCTC | 7 cut(s) | 580, 622, 954, 990, 2384, 2480, 3035 |
| BcuI | ACTAGT | 2 cut(s) | 1376, 3233 |
| BfmI | CTRYAG | 4 cut(s) | 931, 2880, 3346, 3381 |
| BfoI | RGCGCY | 1 cut(s) | 2693 |
| BfrI | CTTAAG | 2 cut(s) | 475, 2210 |
| BfuAI | ACCTGC | 1 cut(s) | 1719 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3377 |
| BglII | AGATCT | 1 cut(s) | 112 |
| BisI | GCNGC | 8 cut(s) | 1253, 1351, 2402, 2416, 2498, 3349, 3381, 3484 |
| BlpI | GCTNAGC | 2 cut(s) | 2470, 3552 |
| BlsI | GCNGC | 8 cut(s) | 1254, 1352, 2403, 2417, 2499, 3350, 3382, 3485 |
| Bme18I | GGWCC | 2 cut(s) | 708, 1087 |
| BmeT110I | CYCGRG | 1 cut(s) | 141 |
| BmgT120I | GGNCC | 2 cut(s) | 708, 1087 |
| BmiI | GGNNCC | 7 cut(s) | 53, 709, 889, 1234, 2691, 3171, 3477 |
| BmrI | ACTGGG | 3 cut(s) | 714, 746, 1266 |
| BmuI | ACTGGG | 3 cut(s) | 714, 746, 1266 |
| BpiI | GAAGAC | 2 cut(s) | 1512, 1704 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 13, 45 |
| BpmI | CTGGAG | 2 cut(s) | 1830, 2970 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2778 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2470, 3552 |
| BpuEI | CTTGAG | 1 cut(s) | 203 |
| BpuMI | CCSGG | 1 cut(s) | 2131 |
| BsaAI | YACGTR | 1 cut(s) | 1538 |
| BsaBI | GATNNNNATC | 2 cut(s) | 111, 1047 |
| BsaHI | GRCGYC | 1 cut(s) | 2690 |
| BsaI | GGTCTC | 3 cut(s) | 580, 622, 990 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 649, 679, 908, 938 |
| Bse3DI | GCAATG | 1 cut(s) | 1360 |
| Bse8I | GATNNNNATC | 2 cut(s) | 111, 1047 |
| BseJI | GATNNNNATC | 2 cut(s) | 111, 1047 |
| BseMI | GCAATG | 1 cut(s) | 1360 |
| BseRI | GAGGAG | 3 cut(s) | 477, 654, 1324 |
| BseX3I | CGGCCG | 1 cut(s) | 1250 |
| BseXI | GCAGC | 7 cut(s) | 1362, 2413, 2427, 2509, 3360, 3367, 3495 |
| BsgI | GTGCAG | 5 cut(s) | 1801, 2211, 2420, 2516, 3655 |
| Bsh1236I | CGCG | 1 cut(s) | 250 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1253 |
| BshFI | GGCC | 8 cut(s) | 526, 1139, 1153, 1252, 1427, 1986, 2334, 3371 |
| BshNI | GGYRCC | 1 cut(s) | 2689 |
| BsiEI | CGRYCG | 1 cut(s) | 1253 |
| BsiHKAI | GWGCWC | 2 cut(s) | 29, 704 |
| BsiHKCI | CYCGRG | 1 cut(s) | 141 |
| BsiSI | CCGG | 4 cut(s) | 711, 869, 1817, 2130 |
| BslFI | GGGAC | 3 cut(s) | 534, 929, 3398 |
| BsmAI | GTCTC | 7 cut(s) | 580, 622, 954, 990, 2384, 2480, 3035 |
| BsmFI | GGGAC | 3 cut(s) | 534, 929, 3398 |
| BsnI | GGCC | 8 cut(s) | 526, 1139, 1153, 1252, 1427, 1986, 2334, 3371 |
| Bso31I | GGTCTC | 3 cut(s) | 580, 622, 990 |
| BsoBI | CYCGRG | 1 cut(s) | 141 |
| Bsp1286I | GDGCHC | 2 cut(s) | 29, 704 |
| Bsp1407I | TGTACA | 1 cut(s) | 2729 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2470, 3552 |
| Bsp19I | CCATGG | 3 cut(s) | 1902, 2335, 2581 |
| BspACI | CCGC | 3 cut(s) | 356, 1253, 3535 |
| BspANI | GGCC | 8 cut(s) | 526, 1139, 1153, 1252, 1427, 1986, 2334, 3371 |
| BspFNI | CGCG | 1 cut(s) | 250 |
| BspHI | TCATGA | 3 cut(s) | 988, 1462, 1809 |
| BspLI | GGNNCC | 7 cut(s) | 53, 709, 889, 1234, 2691, 3171, 3477 |
| BspMAI | CTGCAG | 2 cut(s) | 3350, 3385 |
| BspMI | ACCTGC | 1 cut(s) | 1719 |
| BspPI | GGATC | 6 cut(s) | 1185, 1227, 1927, 1973, 2581, 2582 |
| BspT107I | GGYRCC | 1 cut(s) | 2689 |
| BspTI | CTTAAG | 2 cut(s) | 475, 2210 |
| BspTNI | GGTCTC | 3 cut(s) | 580, 622, 990 |
| BsrBI | CCGCTC | 1 cut(s) | 1255 |
| BsrDI | GCAATG | 1 cut(s) | 1360 |
| BsrGI | TGTACA | 1 cut(s) | 2729 |
| BssNI | GRCGYC | 1 cut(s) | 2690 |
| BssSI | CACGAG | 1 cut(s) | 2394 |
| BssT1I | CCWWGG | 5 cut(s) | 668, 1902, 2335, 2581, 3624 |
| Bst2BI | CACGAG | 1 cut(s) | 2394 |
| Bst6I | CTCTTC | 8 cut(s) | 428, 1074, 1099, 1962, 3033, 3252, 3315, 3347 |
| BstACI | GRCGYC | 1 cut(s) | 2690 |
| BstAFI | CTTAAG | 2 cut(s) | 475, 2210 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1304 |
| BstAUI | TGTACA | 1 cut(s) | 2729 |
| BstBAI | YACGTR | 1 cut(s) | 1538 |
| BstC8I | GCNNGC | 5 cut(s) | 1155, 1300, 2194, 2602, 3527 |
| BstDSI | CCRYGG | 4 cut(s) | 689, 1902, 2335, 2581 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3257, 3420 |
| BstFNI | CGCG | 1 cut(s) | 250 |
| BstH2I | RGCGCY | 1 cut(s) | 2693 |
| BstHHI | GCGC | 4 cut(s) | 86, 1309, 2692, 3152 |
| BstMAI | GTCTC | 7 cut(s) | 580, 622, 954, 990, 2384, 2480, 3035 |
| BstMCI | CGRYCG | 1 cut(s) | 1253 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 10, 1304, 2331, 2503, 2687, 3377, 3389, 3649 |
| BstSFI | CTRYAG | 4 cut(s) | 931, 2880, 3346, 3381 |
| BstUI | CGCG | 1 cut(s) | 250 |
| BstV1I | GCAGC | 7 cut(s) | 1362, 2413, 2427, 2509, 3360, 3367, 3495 |
| BstV2I | GAAGAC | 2 cut(s) | 1512, 1704 |
| BstX2I | RGATCY | 4 cut(s) | 112, 1190, 1919, 2587 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1579, 2570 |
| BstYI | RGATCY | 4 cut(s) | 112, 1190, 1919, 2587 |
| BstZI | CGGCCG | 1 cut(s) | 1250 |
| BsuRI | GGCC | 8 cut(s) | 526, 1139, 1153, 1252, 1427, 1986, 2334, 3371 |
| BtgI | CCRYGG | 4 cut(s) | 689, 1902, 2335, 2581 |
| BtgZI | GCGATG | 1 cut(s) | 3407 |
| BtsI | GCAGTG | 3 cut(s) | 93, 2815, 3390 |
| BtsIMutI | CAGTG | 8 cut(s) | 93, 702, 1435, 1584, 2052, 2815, 3202, 3390 |
| BveI | ACCTGC | 1 cut(s) | 1719 |
| Cac8I | GCNNGC | 5 cut(s) | 1155, 1300, 2194, 2602, 3527 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3551 |
| CciI | TCATGA | 3 cut(s) | 988, 1462, 1809 |
| CfoI | GCGC | 4 cut(s) | 86, 1309, 2692, 3152 |
| Cfr13I | GGNCC | 2 cut(s) | 708, 1087 |
| CseI | GACGC | 1 cut(s) | 256 |
| Csp6I | GTAC | 8 cut(s) | 504, 536, 849, 1113, 1374, 1575, 2730, 3121 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3519, 3554 |
| CviQI | GTAC | 8 cut(s) | 504, 536, 849, 1113, 1374, 1575, 2730, 3121 |
| DinI | GGCGCC | 1 cut(s) | 2691 |
| DraI | TTTAAA | 1 cut(s) | 3510 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 393 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 393 |
| EaeI | YGGCCR | 4 cut(s) | 524, 1250, 1425, 2332 |
| EagI | CGGCCG | 1 cut(s) | 1250 |
| Eam1104I | CTCTTC | 8 cut(s) | 428, 1074, 1099, 1962, 3033, 3252, 3315, 3347 |
| EarI | CTCTTC | 8 cut(s) | 428, 1074, 1099, 1962, 3033, 3252, 3315, 3347 |
| EclXI | CGGCCG | 1 cut(s) | 1250 |
| Eco130I | CCWWGG | 5 cut(s) | 668, 1902, 2335, 2581, 3624 |
| Eco31I | GGTCTC | 3 cut(s) | 580, 622, 990 |
| Eco47I | GGWCC | 2 cut(s) | 708, 1087 |
| Eco52I | CGGCCG | 1 cut(s) | 1250 |
| Eco57I | CTGAAG | 8 cut(s) | 149, 1671, 1848, 2706, 2898, 3057, 3159, 3195 |
| Eco72I | CACGTG | 1 cut(s) | 1538 |
| Eco88I | CYCGRG | 1 cut(s) | 141 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3257, 3420 |
| EcoT14I | CCWWGG | 5 cut(s) | 668, 1902, 2335, 2581, 3624 |
| EcoT22I | ATGCAT | 1 cut(s) | 3244 |
| EgeI | GGCGCC | 1 cut(s) | 2691 |
| EheI | GGCGCC | 1 cut(s) | 2691 |
| ErhI | CCWWGG | 5 cut(s) | 668, 1902, 2335, 2581, 3624 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1782, 1814 |
| FaqI | GGGAC | 3 cut(s) | 534, 929, 3398 |
| FauI | CCCGC | 1 cut(s) | 3528 |
| FauNDI | CATATG | 3 cut(s) | 877, 2293, 3244 |
| FbaI | TGATCA | 3 cut(s) | 1405, 3063, 3097 |
| FblI | GTMKAC | 4 cut(s) | 562, 677, 3499, 3630 |
| Fnu4HI | GCNGC | 8 cut(s) | 1253, 1351, 2402, 2416, 2498, 3349, 3381, 3484 |
| Fsp4HI | GCNGC | 8 cut(s) | 1253, 1351, 2402, 2416, 2498, 3349, 3381, 3484 |
| FspI | TGCGCA | 1 cut(s) | 1308 |
| GlaI | GCGC | 4 cut(s) | 85, 1308, 2691, 3151 |
| GluI | GCNGC | 8 cut(s) | 1253, 1351, 2402, 2416, 2498, 3349, 3381, 3484 |
| GsuI | CTGGAG | 2 cut(s) | 1830, 2970 |
| HaeII | RGCGCY | 1 cut(s) | 2693 |
| HaeIII | GGCC | 8 cut(s) | 526, 1139, 1153, 1252, 1427, 1986, 2334, 3371 |
| HapII | CCGG | 4 cut(s) | 711, 869, 1817, 2130 |
| HgaI | GACGC | 1 cut(s) | 256 |
| HhaI | GCGC | 4 cut(s) | 86, 1309, 2692, 3152 |
| Hin1I | GRCGYC | 1 cut(s) | 2690 |
| Hin6I | GCGC | 4 cut(s) | 84, 1307, 2690, 3150 |
| HinP1I | GCGC | 4 cut(s) | 84, 1307, 2690, 3150 |
| HincII | GTYRAC | 3 cut(s) | 398, 3500, 3592 |
| HindII | GTYRAC | 3 cut(s) | 398, 3500, 3592 |
| HindIII | AAGCTT | 1 cut(s) | 227 |
| HpaII | CCGG | 4 cut(s) | 711, 869, 1817, 2130 |
| Hpy166II | GTNNAC | 9 cut(s) | 398, 563, 678, 1615, 2021, 3361, 3500, 3592, 3631 |
| Hpy8I | GTNNAC | 9 cut(s) | 398, 563, 678, 1615, 2021, 3361, 3500, 3592, 3631 |
| Hpy99I | CGWCG | 2 cut(s) | 175, 250 |
| HpyCH4IV | ACGT | 2 cut(s) | 565, 1537 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 10, 1304, 2331, 2503, 2687, 3377, 3389, 3649 |
| HpySE526I | ACGT | 2 cut(s) | 565, 1537 |
| Hsp92I | GRCGYC | 1 cut(s) | 2690 |
| HspAI | GCGC | 4 cut(s) | 84, 1307, 2690, 3150 |
| KasI | GGCGCC | 1 cut(s) | 2689 |
| Ksp22I | TGATCA | 3 cut(s) | 1405, 3063, 3097 |
| LmnI | GCTCC | 8 cut(s) | 1186, 1238, 1589, 2330, 2717, 2890, 3169, 3356 |
| Lsp1109I | GCAGC | 7 cut(s) | 1362, 2413, 2427, 2509, 3360, 3367, 3495 |
| MaeII | ACGT | 2 cut(s) | 565, 1537 |
| MbiI | CCGCTC | 1 cut(s) | 1255 |
| MfeI | CAATTG | 1 cut(s) | 3153 |
| MflI | RGATCY | 4 cut(s) | 112, 1190, 1919, 2587 |
| MhlI | GDGCHC | 2 cut(s) | 29, 704 |
| MlsI | TGGCCA | 2 cut(s) | 1427, 2334 |
| MluI | ACGCGT | 1 cut(s) | 248 |
| MluNI | TGGCCA | 2 cut(s) | 1427, 2334 |
| Mly113I | GGCGCC | 1 cut(s) | 2690 |
| MlyI | GAGTC | 7 cut(s) | 1049, 1575, 2386, 2482, 2854, 3290, 3605 |
| MmeI | TCCRAC | 8 cut(s) | 153, 269, 575, 951, 977, 1270, 1667, 1840 |
| Mox20I | TGGCCA | 2 cut(s) | 1427, 2334 |
| Mph1103I | ATGCAT | 1 cut(s) | 3244 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3426 |
| MscI | TGGCCA | 2 cut(s) | 1427, 2334 |
| MseI | TTAA | 6 cut(s) | 273, 366, 476, 1665, 2211, 3509 |
| MslI | CAYNNNNRTG | 6 cut(s) | 22, 987, 2541, 2552, 2637, 3677 |
| Msp20I | TGGCCA | 2 cut(s) | 1427, 2334 |
| MspA1I | CMGCKG | 1 cut(s) | 2506 |
| MspCI | CTTAAG | 2 cut(s) | 475, 2210 |
| MspI | CCGG | 4 cut(s) | 711, 869, 1817, 2130 |
| MunI | CAATTG | 1 cut(s) | 3153 |
| MvnI | CGCG | 1 cut(s) | 250 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 10, 1304, 2331, 2503, 2687, 3377, 3389, 3649 |
| NarI | GGCGCC | 1 cut(s) | 2690 |
| NciI | CCSGG | 1 cut(s) | 2131 |
| NcoI | CCATGG | 3 cut(s) | 1902, 2335, 2581 |
| NdeI | CATATG | 3 cut(s) | 877, 2293, 3244 |
| NlaIV | GGNNCC | 7 cut(s) | 53, 709, 889, 1234, 2691, 3171, 3477 |
| NmuCI | GTSAC | 6 cut(s) | 1339, 1538, 1567, 2123, 3282, 3385 |
| NsbI | TGCGCA | 1 cut(s) | 1308 |
| NsiI | ATGCAT | 1 cut(s) | 3244 |
| PagI | TCATGA | 3 cut(s) | 988, 1462, 1809 |
| PasI | CCCWGGG | 1 cut(s) | 1960 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2401 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3426 |
| PflFI | GACNNNGTC | 1 cut(s) | 66 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3367 |
| PfoI | TCCNGGA | 3 cut(s) | 31, 1325, 2762 |
| PkrI | GCNGC | 8 cut(s) | 1254, 1352, 2403, 2417, 2499, 3350, 3382, 3485 |
| PleI | GAGTC | 7 cut(s) | 1049, 1574, 2386, 2482, 2853, 3289, 3604 |
| PluTI | GGCGCC | 1 cut(s) | 2693 |
| PmaCI | CACGTG | 1 cut(s) | 1538 |
| PmlI | CACGTG | 1 cut(s) | 1538 |
| PpsI | GAGTC | 7 cut(s) | 1049, 1574, 2386, 2482, 2853, 3289, 3604 |
| Ppu21I | YACGTR | 1 cut(s) | 1538 |
| PspCI | CACGTG | 1 cut(s) | 1538 |
| PspN4I | GGNNCC | 7 cut(s) | 53, 709, 889, 1234, 2691, 3171, 3477 |
| PspPI | GGNCC | 2 cut(s) | 708, 1087 |
| PstI | CTGCAG | 2 cut(s) | 3350, 3385 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3551 |
| PsuI | RGATCY | 4 cut(s) | 112, 1190, 1919, 2587 |
| PsyI | GACNNNGTC | 1 cut(s) | 66 |
| PvuII | CAGCTG | 1 cut(s) | 2506 |
| RsaI | GTAC | 8 cut(s) | 505, 537, 850, 1114, 1375, 1576, 2731, 3122 |
| RsaNI | GTAC | 8 cut(s) | 504, 536, 849, 1113, 1374, 1575, 2730, 3121 |
| RseI | CAYNNNNRTG | 6 cut(s) | 22, 987, 2541, 2552, 2637, 3677 |
| SalI | GTCGAC | 1 cut(s) | 3498 |
| SaqAI | TTAA | 6 cut(s) | 273, 366, 476, 1665, 2211, 3509 |
| SatI | GCNGC | 8 cut(s) | 1253, 1351, 2402, 2416, 2498, 3349, 3381, 3484 |
| Sau96I | GGNCC | 2 cut(s) | 708, 1087 |
| SchI | GAGTC | 7 cut(s) | 1049, 1575, 2386, 2482, 2854, 3290, 3605 |
| SduI | GDGCHC | 2 cut(s) | 29, 704 |
| SfcI | CTRYAG | 4 cut(s) | 931, 2880, 3346, 3381 |
| SfoI | GGCGCC | 1 cut(s) | 2691 |
| SinI | GGWCC | 2 cut(s) | 708, 1087 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 22, 987, 2541, 2552, 2637, 3677 |
| SmlI | CTYRAG | 3 cut(s) | 182, 475, 2210 |
| SmoI | CTYRAG | 3 cut(s) | 182, 475, 2210 |
| SpeI | ACTAGT | 2 cut(s) | 1376, 3233 |
| SsiI | CCGC | 3 cut(s) | 356, 1253, 3535 |
| SspDI | GGCGCC | 1 cut(s) | 2689 |
| SspI | AATATT | 3 cut(s) | 811, 1993, 3447 |
| StyI | CCWWGG | 5 cut(s) | 668, 1902, 2335, 2581, 3624 |
| TaiI | ACGT | 2 cut(s) | 568, 1540 |
| TaqI | TCGA | 9 cut(s) | 70, 391, 766, 994, 1695, 1977, 2843, 3292, 3499 |
| TaqII | GACCGA | 1 cut(s) | 1104 |
| TatI | WGTACW | 3 cut(s) | 503, 1574, 2729 |
| TauI | GCSGC | 1 cut(s) | 1255 |
| Tru1I | TTAA | 6 cut(s) | 273, 366, 476, 1665, 2211, 3509 |
| Tru9I | TTAA | 6 cut(s) | 273, 366, 476, 1665, 2211, 3509 |
| TscAI | CASTG | 8 cut(s) | 93, 709, 1435, 1584, 2052, 2815, 3202, 3390 |
| TseFI | GTSAC | 6 cut(s) | 1339, 1538, 1567, 2123, 3282, 3385 |
| TseI | GCWGC | 7 cut(s) | 1350, 2401, 2415, 2497, 3348, 3380, 3483 |
| Tsp45I | GTSAC | 6 cut(s) | 1339, 1538, 1567, 2123, 3282, 3385 |
| TspGWI | ACGGA | 4 cut(s) | 706, 1240, 2402, 3622 |
| TspRI | CASTG | 8 cut(s) | 93, 709, 1435, 1584, 2052, 2815, 3202, 3390 |
| Tth111I | GACNNNGTC | 1 cut(s) | 66 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3367 |
| Vha464I | CTTAAG | 2 cut(s) | 475, 2210 |
| VpaK11BI | GGWCC | 2 cut(s) | 708, 1087 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3257, 3420 |
| XapI | RAATTY | 1 cut(s) | 2140 |
| XbaI | TCTAGA | 3 cut(s) | 902, 962, 1051 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1627 |
| XmiI | GTMKAC | 4 cut(s) | 562, 677, 3499, 3630 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3426 |
| Zsp2I | ATGCAT | 1 cut(s) | 3244 |