expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27850 |
| fragaria_vesca | FvH4_4g24320 FvH4_4g24320 FvH4_4g24320 FvH4_4g24320 FvH4_4g24320 |
| malus_domestica | MD13G1112200.v1.1 MD16G1111800.v1.1 |
| prunus_persica | Prupe.1G233200_v2.0.a1 Prupe.1G233200_v2.0.a1 |
| pyrus_communis | pycom13g09760 pycom16g09480 |
| rosa_chinensis | RchiOBHm_Chr4g0431121 |
| rosa_laevigata | RLG00000006923 |
| rosa_multiflora | Rmu_sc0005258.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00372710 |
| rosa_rugosa | Rorug04G0248400 Rorug04G0248500.1 |
| rosa_samantha | Rh4AG304800 Rh4BG312000 Rh4CG328300 Rh4DG308600 |
| rosa_wichuraiana | Rw4G026490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 390 |
| AccB1I | GGYRCC | 1 cut(s) | 1459 |
| AccI | GTMKAC | 1 cut(s) | 559 |
| AciI | CCGC | 1 cut(s) | 936 |
| AclWI | GGATC | 3 cut(s) | 330, 1242, 1555 |
| AcoI | YGGCCR | 2 cut(s) | 1170, 1624 |
| AcsI | RAATTY | 1 cut(s) | 1571 |
| AcuI | CTGAAG | 3 cut(s) | 149, 1431, 1635 |
| AfaI | GTAC | 4 cut(s) | 372, 502, 625, 1390 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 248, 491, 702, 941 |
| AflIII | ACRYGT | 1 cut(s) | 1257 |
| AgsI | TTSAA | 5 cut(s) | 127, 182, 223, 978, 1571 |
| AjiI | CACGTC | 1 cut(s) | 617 |
| AjnI | CCWGG | 6 cut(s) | 31, 619, 698, 739, 1340, 1428 |
| AluBI | AGCT | 4 cut(s) | 226, 1130, 1148, 1604 |
| AluI | AGCT | 4 cut(s) | 226, 1130, 1148, 1604 |
| Alw21I | GWGCWC | 1 cut(s) | 713 |
| Alw26I | GTCTC | 4 cut(s) | 376, 631, 969, 1005 |
| AlwI | GGATC | 3 cut(s) | 330, 1242, 1555 |
| Ama87I | CYCGRG | 2 cut(s) | 141, 246 |
| AoxI | GGCC | 5 cut(s) | 34, 521, 1170, 1265, 1624 |
| ApeKI | GCWGC | 3 cut(s) | 444, 1365, 1604 |
| ApoI | RAATTY | 1 cut(s) | 1571 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1472, 1504 |
| AspS9I | GGNCC | 2 cut(s) | 24, 717 |
| AsuC2I | CCSGG | 3 cut(s) | 493, 715, 825 |
| AsuHPI | GGTGA | 4 cut(s) | 783, 924, 1067, 1693 |
| AvaI | CYCGRG | 2 cut(s) | 141, 246 |
| AvaII | GGWCC | 2 cut(s) | 24, 717 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1380, 1413 |
| BalI | TGGCCA | 1 cut(s) | 1626 |
| BanI | GGYRCC | 1 cut(s) | 1459 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1448, 1480 |
| BbsI | GAAGAC | 3 cut(s) | 189, 675, 1527 |
| Bbv12I | GWGCWC | 1 cut(s) | 713 |
| BbvI | GCAGC | 3 cut(s) | 456, 1377, 1591 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1472, 1506 |
| BciT130I | CCWGG | 6 cut(s) | 33, 621, 700, 741, 1342, 1430 |
| BciVI | GTATCC | 1 cut(s) | 938 |
| BclI | TGATCA | 1 cut(s) | 1420 |
| BcnI | CCSGG | 3 cut(s) | 493, 715, 825 |
| BcoDI | GTCTC | 4 cut(s) | 376, 631, 969, 1005 |
| BfaI | CTAG | 5 cut(s) | 459, 654, 912, 1362, 1578 |
| BfmI | CTRYAG | 1 cut(s) | 1587 |
| BfuI | GTATCC | 1 cut(s) | 938 |
| BglII | AGATCT | 2 cut(s) | 112, 1205 |
| BisI | GCNGC | 3 cut(s) | 445, 1366, 1605 |
| BlsI | GCNGC | 3 cut(s) | 446, 1367, 1606 |
| Bme1390I | CCNGG | 9 cut(s) | 33, 493, 621, 700, 715, 741, 825, 1342, 1430 |
| Bme18I | GGWCC | 2 cut(s) | 24, 717 |
| BmeT110I | CYCGRG | 2 cut(s) | 141, 246 |
| BmgBI | CACGTC | 1 cut(s) | 617 |
| BmgT120I | GGNCC | 2 cut(s) | 24, 717 |
| BmiI | GGNNCC | 5 cut(s) | 718, 735, 898, 928, 1461 |
| BmrFI | CCNGG | 9 cut(s) | 33, 493, 621, 700, 715, 741, 825, 1342, 1430 |
| BmrI | ACTGGG | 2 cut(s) | 459, 1536 |
| BmsI | GCATC | 5 cut(s) | 797, 829, 917, 947, 1333 |
| BmuI | ACTGGG | 2 cut(s) | 459, 1536 |
| BpiI | GAAGAC | 3 cut(s) | 189, 675, 1527 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 13, 45 |
| BpmI | CTGGAG | 4 cut(s) | 15, 526, 817, 888 |
| Bpu10I | CCTNAGC | 1 cut(s) | 473 |
| BpuMI | CCSGG | 3 cut(s) | 493, 715, 825 |
| Bsa29I | ATCGAT | 1 cut(s) | 1697 |
| BsaBI | GATNNNNATC | 1 cut(s) | 111 |
| BsaI | GGTCTC | 3 cut(s) | 376, 631, 1005 |
| BsaJI | CCNNGG | 4 cut(s) | 339, 677, 698, 740 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 248, 491, 702, 941 |
| Bse118I | RCCGGY | 1 cut(s) | 877 |
| Bse1I | ACTGG | 8 cut(s) | 359, 465, 543, 720, 834, 1182, 1278, 1531 |
| Bse3DI | GCAATG | 1 cut(s) | 1375 |
| Bse8I | GATNNNNATC | 1 cut(s) | 111 |
| BseBI | CCWGG | 6 cut(s) | 33, 621, 700, 741, 1342, 1430 |
| BseCI | ATCGAT | 1 cut(s) | 1697 |
| BseDI | CCNNGG | 4 cut(s) | 339, 677, 698, 740 |
| BseGI | GGATG | 8 cut(s) | 178, 349, 416, 665, 711, 1438, 1513, 1627 |
| BseJI | GATNNNNATC | 1 cut(s) | 111 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 248, 491, 702, 941 |
| BseMI | GCAATG | 1 cut(s) | 1375 |
| BseMII | CTCAG | 3 cut(s) | 1040, 1365, 1443 |
| BseNI | ACTGG | 8 cut(s) | 359, 465, 543, 720, 834, 1182, 1278, 1531 |
| BseRI | GAGGAG | 3 cut(s) | 315, 474, 1339 |
| BseXI | GCAGC | 3 cut(s) | 456, 1377, 1591 |
| BseYI | CCCAGC | 1 cut(s) | 226 |
| Bsh1285I | CGRYCG | 1 cut(s) | 878 |
| BshFI | GGCC | 5 cut(s) | 36, 523, 1172, 1267, 1626 |
| BshNI | GGYRCC | 1 cut(s) | 1459 |
| BshVI | ATCGAT | 1 cut(s) | 1697 |
| BsiEI | CGRYCG | 1 cut(s) | 878 |
| BsiHKAI | GWGCWC | 1 cut(s) | 713 |
| BsiHKCI | CYCGRG | 2 cut(s) | 141, 246 |
| BsiSI | CCGG | 5 cut(s) | 14, 492, 714, 824, 878 |
| BslFI | GGGAC | 2 cut(s) | 447, 766 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 248, 491, 702, 941 |
| BsmAI | GTCTC | 4 cut(s) | 376, 631, 969, 1005 |
| BsmFI | GGGAC | 2 cut(s) | 447, 766 |
| BsnI | GGCC | 5 cut(s) | 36, 523, 1172, 1267, 1626 |
| Bso31I | GGTCTC | 3 cut(s) | 376, 631, 1005 |
| BsoBI | CYCGRG | 2 cut(s) | 141, 246 |
| Bsp1286I | GDGCHC | 1 cut(s) | 713 |
| BspACI | CCGC | 1 cut(s) | 936 |
| BspANI | GGCC | 5 cut(s) | 36, 523, 1172, 1267, 1626 |
| BspCNI | CTCAG | 3 cut(s) | 1039, 1364, 1444 |
| BspDI | ATCGAT | 1 cut(s) | 1697 |
| BspHI | TCATGA | 3 cut(s) | 1003, 1477, 1638 |
| BspLI | GGNNCC | 5 cut(s) | 718, 735, 898, 928, 1461 |
| BspPI | GGATC | 3 cut(s) | 330, 1242, 1555 |
| BspT107I | GGYRCC | 1 cut(s) | 1459 |
| BspTNI | GGTCTC | 3 cut(s) | 376, 631, 1005 |
| BsrDI | GCAATG | 1 cut(s) | 1375 |
| BsrFI | RCCGGY | 1 cut(s) | 877 |
| BsrI | ACTGG | 8 cut(s) | 359, 465, 543, 720, 834, 1182, 1278, 1531 |
| BssAI | RCCGGY | 1 cut(s) | 877 |
| BssECI | CCNNGG | 4 cut(s) | 339, 677, 698, 740 |
| BssT1I | CCWWGG | 2 cut(s) | 339, 677 |
| Bst2UI | CCWGG | 6 cut(s) | 33, 621, 700, 741, 1342, 1430 |
| Bst4CI | ACNGT | 3 cut(s) | 370, 510, 1591 |
| Bst6I | CTCTTC | 4 cut(s) | 276, 425, 1054, 1089 |
| BstC8I | GCNNGC | 1 cut(s) | 535 |
| BstDEI | CTNAG | 4 cut(s) | 473, 1026, 1351, 1452 |
| BstF5I | GGATG | 8 cut(s) | 178, 349, 416, 665, 711, 1438, 1513, 1627 |
| BstMAI | GTCTC | 4 cut(s) | 376, 631, 969, 1005 |
| BstMCI | CGRYCG | 1 cut(s) | 878 |
| BstNI | CCWGG | 6 cut(s) | 33, 621, 700, 741, 1342, 1430 |
| BstNSI | RCATGY | 1 cut(s) | 1261 |
| BstSCI | CCNGG | 9 cut(s) | 31, 491, 619, 698, 713, 739, 823, 1340, 1428 |
| BstSFI | CTRYAG | 1 cut(s) | 1587 |
| BstV1I | GCAGC | 3 cut(s) | 456, 1377, 1591 |
| BstV2I | GAAGAC | 3 cut(s) | 189, 675, 1527 |
| BstX2I | RGATCY | 2 cut(s) | 112, 1205 |
| BstYI | RGATCY | 2 cut(s) | 112, 1205 |
| Bsu15I | ATCGAT | 1 cut(s) | 1697 |
| BsuI | GTATCC | 1 cut(s) | 938 |
| BsuRI | GGCC | 5 cut(s) | 36, 523, 1172, 1267, 1626 |
| BsuTUI | ATCGAT | 1 cut(s) | 1697 |
| BtrI | CACGTC | 1 cut(s) | 617 |
| BtsCI | GGATG | 8 cut(s) | 178, 349, 416, 665, 711, 1438, 1513, 1627 |
| BtsIMutI | CAGTG | 3 cut(s) | 841, 1285, 1524 |
| Cac8I | GCNNGC | 1 cut(s) | 535 |
| CciI | TCATGA | 3 cut(s) | 1003, 1477, 1638 |
| Cfr10I | RCCGGY | 1 cut(s) | 877 |
| Cfr13I | GGNCC | 2 cut(s) | 24, 717 |
| ClaI | ATCGAT | 1 cut(s) | 1697 |
| Csp6I | GTAC | 4 cut(s) | 371, 501, 624, 1389 |
| CviAII | CATG | 8 cut(s) | 807, 1004, 1258, 1478, 1532, 1541, 1639, 1672 |
| CviQI | GTAC | 4 cut(s) | 371, 501, 624, 1389 |
| DdeI | CTNAG | 4 cut(s) | 473, 1026, 1351, 1452 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 390 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 390 |
| EaeI | YGGCCR | 2 cut(s) | 1170, 1624 |
| Eam1104I | CTCTTC | 4 cut(s) | 276, 425, 1054, 1089 |
| EarI | CTCTTC | 4 cut(s) | 276, 425, 1054, 1089 |
| Eco130I | CCWWGG | 2 cut(s) | 339, 677 |
| Eco31I | GGTCTC | 3 cut(s) | 376, 631, 1005 |
| Eco32I | GATATC | 1 cut(s) | 1537 |
| Eco47I | GGWCC | 2 cut(s) | 24, 717 |
| Eco57I | CTGAAG | 3 cut(s) | 149, 1431, 1635 |
| Eco88I | CYCGRG | 2 cut(s) | 141, 246 |
| EcoO109I | RGGNCCY | 1 cut(s) | 24 |
| EcoRI | GAATTC | 1 cut(s) | 1571 |
| EcoRII | CCWGG | 6 cut(s) | 31, 619, 698, 739, 1340, 1428 |
| EcoRV | GATATC | 1 cut(s) | 1537 |
| EcoT14I | CCWWGG | 2 cut(s) | 339, 677 |
| ErhI | CCWWGG | 2 cut(s) | 339, 677 |
| FaeI | CATG | 8 cut(s) | 810, 1007, 1261, 1481, 1535, 1544, 1642, 1675 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 739, 771 |
| FaqI | GGGAC | 2 cut(s) | 447, 766 |
| FatI | CATG | 8 cut(s) | 806, 1003, 1257, 1477, 1531, 1540, 1638, 1671 |
| FauI | CCCGC | 1 cut(s) | 943 |
| FauNDI | CATATG | 1 cut(s) | 886 |
| FbaI | TGATCA | 1 cut(s) | 1420 |
| FblI | GTMKAC | 1 cut(s) | 559 |
| Fnu4HI | GCNGC | 3 cut(s) | 445, 1366, 1605 |
| FokI | GGATG | 8 cut(s) | 185, 356, 403, 652, 718, 1445, 1520, 1614 |
| Fsp4HI | GCNGC | 3 cut(s) | 445, 1366, 1605 |
| FspBI | CTAG | 5 cut(s) | 459, 654, 912, 1362, 1578 |
| GluI | GCNGC | 3 cut(s) | 445, 1366, 1605 |
| GsaI | CCCAGC | 1 cut(s) | 230 |
| GsuI | CTGGAG | 4 cut(s) | 15, 526, 817, 888 |
| HaeIII | GGCC | 5 cut(s) | 36, 523, 1172, 1267, 1626 |
| HapII | CCGG | 5 cut(s) | 14, 492, 714, 824, 878 |
| Hin1II | CATG | 8 cut(s) | 810, 1007, 1261, 1481, 1535, 1544, 1642, 1675 |
| HincII | GTYRAC | 1 cut(s) | 395 |
| HindII | GTYRAC | 1 cut(s) | 395 |
| HinfI | GANTC | 6 cut(s) | 52, 1070, 1214, 1448, 1610, 1619 |
| HpaII | CCGG | 5 cut(s) | 14, 492, 714, 824, 878 |
| HphI | GGTGA | 4 cut(s) | 783, 924, 1067, 1693 |
| Hpy166II | GTNNAC | 2 cut(s) | 395, 560 |
| Hpy8I | GTNNAC | 2 cut(s) | 395, 560 |
| HpyAV | CCTTC | 9 cut(s) | 18, 513, 585, 741, 863, 945, 1306, 1406, 1450 |
| HpyCH4III | ACNGT | 3 cut(s) | 370, 510, 1591 |
| HpyCH4IV | ACGT | 4 cut(s) | 562, 598, 616, 1557 |
| HpyCH4V | TGCA | 7 cut(s) | 136, 788, 842, 1078, 1324, 1373, 1400 |
| HpyF3I | CTNAG | 4 cut(s) | 473, 1026, 1351, 1452 |
| HpySE526I | ACGT | 4 cut(s) | 562, 598, 616, 1557 |
| Hsp92II | CATG | 8 cut(s) | 810, 1007, 1261, 1481, 1535, 1544, 1642, 1675 |
| Ksp22I | TGATCA | 1 cut(s) | 1420 |
| LmnI | GCTCC | 3 cut(s) | 679, 739, 1201 |
| Lsp1109I | GCAGC | 3 cut(s) | 456, 1377, 1591 |
| LweI | GCATC | 5 cut(s) | 797, 829, 917, 947, 1333 |
| MaeI | CTAG | 5 cut(s) | 459, 654, 912, 1362, 1578 |
| MaeII | ACGT | 4 cut(s) | 562, 598, 616, 1557 |
| MaeIII | GTNAC | 6 cut(s) | 260, 361, 434, 763, 1055, 1354 |
| MflI | RGATCY | 2 cut(s) | 112, 1205 |
| MhlI | GDGCHC | 1 cut(s) | 713 |
| MlsI | TGGCCA | 1 cut(s) | 1626 |
| MluCI | AATT | 4 cut(s) | 200, 209, 231, 1571 |
| MluNI | TGGCCA | 1 cut(s) | 1626 |
| MlyI | GAGTC | 2 cut(s) | 1064, 1457 |
| MmeI | TCCRAC | 2 cut(s) | 150, 992 |
| Mox20I | TGGCCA | 1 cut(s) | 1626 |
| MscI | TGGCCA | 1 cut(s) | 1626 |
| MseI | TTAA | 3 cut(s) | 270, 308, 1676 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1002, 1560 |
| Msp20I | TGGCCA | 1 cut(s) | 1626 |
| MspI | CCGG | 5 cut(s) | 14, 492, 714, 824, 878 |
| MspR9I | CCNGG | 9 cut(s) | 33, 493, 621, 700, 715, 741, 825, 1342, 1430 |
| MvaI | CCWGG | 6 cut(s) | 33, 621, 700, 741, 1342, 1430 |
| NciI | CCSGG | 3 cut(s) | 493, 715, 825 |
| NdeI | CATATG | 1 cut(s) | 886 |
| NlaIII | CATG | 8 cut(s) | 810, 1007, 1261, 1481, 1535, 1544, 1642, 1675 |
| NlaIV | GGNNCC | 5 cut(s) | 718, 735, 898, 928, 1461 |
| NmeAIII | GCCGAG | 2 cut(s) | 62, 69 |
| NmuCI | GTSAC | 3 cut(s) | 260, 1055, 1354 |
| NspI | RCATGY | 1 cut(s) | 1261 |
| PagI | TCATGA | 3 cut(s) | 1003, 1477, 1638 |
| PciI | ACATGT | 1 cut(s) | 1257 |
| PfeI | GAWTC | 4 cut(s) | 52, 1214, 1610, 1619 |
| PfoI | TCCNGGA | 2 cut(s) | 491, 1340 |
| PkrI | GCNGC | 3 cut(s) | 446, 1367, 1606 |
| PleI | GAGTC | 2 cut(s) | 1064, 1456 |
| PpsI | GAGTC | 2 cut(s) | 1064, 1456 |
| PpuMI | RGGWCCY | 1 cut(s) | 24 |
| PscI | ACATGT | 1 cut(s) | 1257 |
| Psp5II | RGGWCCY | 1 cut(s) | 24 |
| Psp6I | CCWGG | 6 cut(s) | 31, 619, 698, 739, 1340, 1428 |
| PspFI | CCCAGC | 1 cut(s) | 226 |
| PspGI | CCWGG | 6 cut(s) | 31, 619, 698, 739, 1340, 1428 |
| PspN4I | GGNNCC | 5 cut(s) | 718, 735, 898, 928, 1461 |
| PspPI | GGNCC | 2 cut(s) | 24, 717 |
| PspPPI | RGGWCCY | 1 cut(s) | 24 |
| PsuI | RGATCY | 2 cut(s) | 112, 1205 |
| RsaI | GTAC | 4 cut(s) | 372, 502, 625, 1390 |
| RsaNI | GTAC | 4 cut(s) | 371, 501, 624, 1389 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1002, 1560 |
| SaqAI | TTAA | 3 cut(s) | 270, 308, 1676 |
| SatI | GCNGC | 3 cut(s) | 445, 1366, 1605 |
| Sau96I | GGNCC | 2 cut(s) | 24, 717 |
| SchI | GAGTC | 2 cut(s) | 1064, 1457 |
| ScrFI | CCNGG | 9 cut(s) | 33, 493, 621, 700, 715, 741, 825, 1342, 1430 |
| SduI | GDGCHC | 1 cut(s) | 713 |
| SfaNI | GCATC | 5 cut(s) | 797, 829, 917, 947, 1333 |
| SfcI | CTRYAG | 1 cut(s) | 1587 |
| SinI | GGWCC | 2 cut(s) | 24, 717 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1002, 1560 |
| Sse9I | AATT | 4 cut(s) | 200, 209, 231, 1571 |
| SsiI | CCGC | 1 cut(s) | 936 |
| SspI | AATATT | 1 cut(s) | 820 |
| SspMI | CTAG | 5 cut(s) | 459, 654, 912, 1362, 1578 |
| StyD4I | CCNGG | 9 cut(s) | 31, 491, 619, 698, 713, 739, 823, 1340, 1428 |
| StyI | CCWWGG | 2 cut(s) | 339, 677 |
| TaaI | ACNGT | 3 cut(s) | 370, 510, 1591 |
| TaiI | ACGT | 4 cut(s) | 565, 601, 619, 1560 |
| TaqI | TCGA | 6 cut(s) | 78, 334, 388, 874, 1225, 1697 |
| TaqII | GACCGA | 1 cut(s) | 1119 |
| TasI | AATT | 4 cut(s) | 200, 209, 231, 1571 |
| TatI | WGTACW | 1 cut(s) | 500 |
| TfiI | GAWTC | 4 cut(s) | 52, 1214, 1610, 1619 |
| Tru1I | TTAA | 3 cut(s) | 270, 308, 1676 |
| Tru9I | TTAA | 3 cut(s) | 270, 308, 1676 |
| TscAI | CASTG | 3 cut(s) | 841, 1285, 1531 |
| TseFI | GTSAC | 3 cut(s) | 260, 1055, 1354 |
| TseI | GCWGC | 3 cut(s) | 444, 1365, 1604 |
| Tsp45I | GTSAC | 3 cut(s) | 260, 1055, 1354 |
| TspDTI | ATGAA | 4 cut(s) | 123, 600, 981, 1533 |
| TspGWI | ACGGA | 1 cut(s) | 649 |
| TspRI | CASTG | 3 cut(s) | 841, 1285, 1531 |
| VpaK11BI | GGWCC | 2 cut(s) | 24, 717 |
| XapI | RAATTY | 1 cut(s) | 1571 |
| XbaI | TCTAGA | 1 cut(s) | 911 |
| XceI | RCATGY | 1 cut(s) | 1261 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 727, 1228, 1639 |
| XmiI | GTMKAC | 1 cut(s) | 559 |
| XspI | CTAG | 5 cut(s) | 459, 654, 912, 1362, 1578 |