RchiOBHm_Chr4g0431121

expressed protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
55430795 .. 55438267
7473 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39983

Sequence Viewer

Length: 3660 bp
ATGCCTCCTTCTCCGGCATTGAGGTCCTCTCCAGGCCGAGAGCCGAGTGGGAATCAGCATAGACGAGGTAGGAGTTTCGAGAGTGGAATGATTGTGAGAGGGAAAGATGAAGATCTTGCTTTGTTCAACGAAATGCAGACCCGAGAGAAAGAGGGTTTCTTGCTTCAGTCGGATGATCTTGAAGACACATTTTCTACGAAATTGAGGCAATTTTCGGATTTCAAGCTGGGAATCGCCATTCCTACTCGGGGGGAGAGTAGTGACTTGCTTAATGCGGAAGAAGAGAAAAATGACTACGAGTGGTTATTAACGCCTCCCGACACTCCTCTTTTTCGATCCTTGGATGATGAGCCACCACCAGTTACTACGGTACAGAGGGGGAGACCTCGAAGTCAACCTATTTCTATATCAAGATCATCCACGATGGAGAAGAGTTACCGAAGCAGCAGGGGTAGTGCTAGTCCCAGTCGCCTAAGCCCATCTCCTCGTTCTGGGAATAGTACATTACAGTCAAGAGGAAGGCCATCATCAGCACGCAACTCCAGTCCTACCCCAAGTCTACGTCCTGCTTCTCCTTCACATCTTGCTACTCCATCACGTTCTGCTACTTCATCACGTCCTGGTACTCCATCACGGAGACCATCTACTCCCCCTAGTAAATCCCCATCCCCTGCTCCGAGGTCTTCTACCCCTACCCCCAGGAGGATGAGCACCGGGTCCAGTAGTACTGTGGCTCCACCGGGGAGAAGGGGGACTTCTCCTGTAACGACAAGTAGAGGGAACTCTGCATCACCGAAAATAAAAGCATGGCAAACAAATATTCCGGGCTTCTCCAGTGATGCACCTCCCAACCTTCGCACTTCTCTTGCTGATCGACCGGCAACATATGTGAGGGGTTCCTCTCCAGCGTCTAGAAGTGGGAGGGGTTCCTCACCTGCATCTGGATACAGAAGGCAATCAATGTCTCCAACTGCTTCAAGAAGTGTCAGTTCATCTCATAGTCATGATAGAGACCCGTTTAGTTCTCTGAGCAAAGGTTCTATTGCCTCTTCTGGTGATGATGATCTGGACTCTCTGCAATCTCTTCCTGTGGGCAGTTTAGACCGATCAACTCCGAAAAGAGTTTCAGCTTTCTCAAACAACAGAGCTGTGGCGTTCTCAAAGAAATCGGCCAAACTGGTGTCCTCATCTTCTGCTCCAAAAAGATCTTTTGATTCTGCCATTCGACAAATGGATCATCGGAAAACCCCTCAAAACATGTTTAGGCCACTCTTGTCCAGTGTTCCGAGTAGCACCTTCTATGTTGGAAAATCAAGTTCTGTGCATCGTCCTCTGATTTCCAGGAACTCCTCAGTCACAACTAGCAGCAATGCAAGTTCTGATATAGGTACAAGTGTTGCACATGATACTGAAGGGAGTGATCACAACCAGGATGATATGGCTATTGAGTCTGAGAAGGTGCCATACTCTGATGGTCATGACGAAGTATTTGCCTTTGATAAGATGGATGTAGTAAATGAAGACACTGGGCATGATATCCATGATGGATCACACGACGTTGATGACATTGAATTCACTAGAAGTTCTACAATTGAGTGTTCTGGCCATCCCAATATCATGATGGAAGTCAGTCAAACTTCTGAAGATCCTCATGTTAAGGGTGATTTTTCTGAAATCGATAGTTTAGAAGACATGGAACTTTGTTTGAAATGTGGGTGCAAGTACTATGTTTCTAATGAGGTGGAAAGGAAAATTAGACTTTGTCTAGAATGCAGTAGGAAAGATAAACTTCTGAGTGTCCTGATTCTGGAGAGAGATGTAGTTCCTGAAAACTCCTCACCTTTGTCTGTAAAAAATTTGGAAGAAGAAAAGCCTTTAGATGCAATGGAACCAGTGATAGTTGTACCTGGATCTCCACAGGTGACTCATCTGGAGAAATCAAAGAATTCCCATGGTGAAGAGAAGGCTGATCAAGGCCAAATTACCTACAATGAGCGAATCCATAATGGCTTAGAAGAAAATTCTCTTGCAATGCCATTTGTCAAGGGAGGTGAGGATGGGCTTTCCAAGCAGCAAGAGGCGCGCTCATTATCTGTTGGTGGTGGTCCACCTAATAGTGACACTGGGAATCAGAAATTATATCATTCTAACAACTATTCAAAGATGAGGGATGACATTTCAGAAGGTACAGGCATTTCCATACTGCTGAAGAGGACTAGCAGTAGCAAGGGGGCTGCTTTTCAGGGTAGGACTTTCACAGCCGCTGCCATACCTTATGAGGATCTGTCATATGCTAGAGATAGTTCAAACAGTATGAGAAGCTCCATTGGGCATGGTACTTTCTCTGCTTCATCTTCAGTTGATTTTAGTCCAGCTAGACAAACAGAGGCTCGTGTCCAGCGGCAGTTGAGTGGCAAGAAATCAGAAATGGAAACTCACAGACAGGATACAAACATGAGGGCTCAAAGCATTGGGTTATCAGACATGGAGATTCTTAGACATGATACAAGCATGAAGCACCAAAGAGTTAGGTCATCTTCCTATGGACTTCCAAACTATTCTCATGAAGCGTTGGGTCTTTCTTCAGACACAATTGATGACGAGGGTACTGTTAATAATGGGGAATATGATGTTTCGGAAGGGACGCACACAACATCTGAAGAACACTTGCCAACTTCAGACTGTACGGAAGCAGATGGTACCACAACTTCTACCAGAACAACTGCTGTAGAAGAGGATGAGGAAATCACTGTTAGAAGTACAAGAGTTGATGCTTCTACTTCAGAACTGTCGAGCCATGCAGCGAACAGTTTGTTAGAGAACAATACAGTAGCAATGTTTCCCAATTGTGAAAATTGTGCTTCAAATGAATACAGTGAAGACTTGCAAAACAATGCGAGGAGTGCCACAAATATAGAAGTATCAGCTATAGATCCTGAGTCTTCATTGAACGAGGAAGATATCATCCAAAACAGTAATGGAGTGGATGTTGAAGAGATCACTAATCACAGCTCCTTGATTACAGTATCTGAAATAGGAATTGAAAAGGGTCATCACAGCACCTCTGGTTCCAGTAGCGATGATGCTTCACTTGAATCAAAGAGTACCATGGAGGAGATTCACGAGCCTTCAATTCCAAATCTTTCTGACAGTAGTCTGACATCTTCTATTCCAGAGATCAACACCACCAATAATGCACATTGCATCCTAGAAGAGGAATCAACAGTAATGGTAGAGTCTCAAGGCCGAAGCAAGGGAAGAAGCCTTACACTGGAAGAGGCAACTGATACGATACTCTTATGCAGCTCCATTGTCCATGATCTGGCCTACCAGGCTGCAACAATAGCAATAGAAAAGGAGCAGTCAGTACCATTAGAAGGTTCACAGCCTACAGTTACAATATTGGGGAAATCCAATCCCGAGAGAAAGGAACCACGTGGCAGAACCGTCAGTAGACGCTCTGTAAAGTCTCAGAAGGGTAGGCAAAAGCGGATGGAACCAGATGCAGGACCCCCTGCAAGTAAGACTGAGAATGACGAGAATGAGAATGAGAATGTTGATGAGTCTCTGCAACAACGCCCTGTAGGGCTTCCTCCTAACAAGGCAGACGGCATGAAGCCCCCAAAGCTGGAATCCAAGTGCAACTGCACGATAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1219

Amino Acids

132.21

Weight (kDa)

5.49

Isoelectric Point (pI)

67.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 943
AasI GACNNNNNNGTC 1 cut(s) 390
Acc36I ACCTGC 1 cut(s) 943
Acc65I GGTACC 1 cut(s) 2699
AccB1I GGYRCC 2 cut(s) 1459, 2699
AccB7I CCANNNNNTGG 1 cut(s) 3322
AccI GTMKAC 2 cut(s) 559, 3454
AccII CGCG 1 cut(s) 2083
AciI CCGC 4 cut(s) 275, 2262, 2401, 3490
AclWI GGATC 7 cut(s) 330, 1242, 1555, 1640, 1918, 2289, 2927
AcoI YGGCCR 2 cut(s) 1170, 1603
AcsI RAATTY 4 cut(s) 1571, 1855, 1945, 2020
AcuI CTGAAG 9 cut(s) 149, 1431, 1662, 2228, 2340, 2568, 2661, 2679, 2766
AcvI CACGTG 1 cut(s) 3437
AflIII ACRYGT 1 cut(s) 1257
AjiI CACGTC 1 cut(s) 617
AjnI CCWGG 7 cut(s) 31, 619, 698, 1340, 1428, 1906, 3330
AluBI AGCT 9 cut(s) 226, 1130, 1148, 2322, 2375, 2927, 3012, 3306, 3628
AluI AGCT 9 cut(s) 226, 1130, 1148, 2322, 2375, 2927, 3012, 3306, 3628
Alw21I GWGCWC 1 cut(s) 713
Alw26I GTCTC 7 cut(s) 376, 631, 969, 1005, 3243, 3474, 3570
AlwI GGATC 7 cut(s) 330, 1242, 1555, 1640, 1918, 2289, 2927
AlwNI CAGNNNCTG 2 cut(s) 2264, 3029
Ama87I CYCGRG 3 cut(s) 141, 246, 3419
AoxI GGCC 8 cut(s) 34, 521, 1170, 1265, 1603, 1975, 3244, 3324
ApeKI GCWGC 8 cut(s) 444, 1365, 2071, 2234, 2264, 2801, 3303, 3335
ApoI RAATTY 4 cut(s) 1571, 1855, 1945, 2020
ArsI GACNNNNNNTTYG 2 cut(s) 1472, 1504
Asp718I GGTACC 1 cut(s) 2699
AspLEI GCGC 2 cut(s) 2083, 2085
AspS9I GGNCC 4 cut(s) 24, 717, 2105, 3509
AsuC2I CCSGG 3 cut(s) 715, 741, 825
AsuHPI GGTGA 8 cut(s) 783, 924, 1067, 1673, 1830, 1933, 1967, 2063
AvaI CYCGRG 3 cut(s) 141, 246, 3419
AvaII GGWCC 4 cut(s) 24, 717, 2105, 3509
BaeI ACNNNNGTAYC 2 cut(s) 1380, 1413
BalI TGGCCA 1 cut(s) 1605
BanI GGYRCC 2 cut(s) 1459, 2699
BanII GRGCYC 1 cut(s) 2464
BarI GAAGNNNNNNTAC 6 cut(s) 1448, 1480, 2692, 2724, 3250, 3282
BauI CACGAG 2 cut(s) 2391, 3122
BbrPI CACGTG 1 cut(s) 3437
BbsI GAAGAC 6 cut(s) 189, 675, 1527, 1695, 2886, 2934
Bbv12I GWGCWC 1 cut(s) 713
BbvI GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3315, 3322
BceAI ACGGC 1 cut(s) 3625
BcgI CGANNNNNNTGC 2 cut(s) 1472, 1506
BciT130I CCWGG 7 cut(s) 33, 621, 700, 1342, 1430, 1908, 3332
BciVI GTATCC 2 cut(s) 938, 2440
BclI TGATCA 2 cut(s) 1420, 1969
BcnI CCSGG 3 cut(s) 715, 741, 825
BcoDI GTCTC 7 cut(s) 376, 631, 969, 1005, 3243, 3474, 3570
BfmI CTRYAG 4 cut(s) 2727, 2928, 3390, 3582
BfuAI ACCTGC 1 cut(s) 943
BfuI GTATCC 2 cut(s) 938, 2440
BglI GCCNNNNNGGC 1 cut(s) 3332
BglII AGATCT 2 cut(s) 112, 1205
BmcAI AGTACT 2 cut(s) 727, 1724
Bme18I GGWCC 4 cut(s) 24, 717, 2105, 3509
BmeT110I CYCGRG 3 cut(s) 141, 246, 3419
BmgBI CACGTC 1 cut(s) 617
BmgT120I GGNCC 4 cut(s) 24, 717, 2105, 3509
BmrI ACTGGG 3 cut(s) 459, 1536, 2133
BmsI GCATC 9 cut(s) 797, 829, 947, 1333, 1870, 2761, 3073, 3213, 3493
BmuI ACTGGG 3 cut(s) 459, 1536, 2133
BoxI GACNNNNGTC 1 cut(s) 3153
BpiI GAAGAC 6 cut(s) 189, 675, 1527, 1695, 2886, 2934
BplI GAGNNNNNCTC 4 cut(s) 13, 45, 2069, 2101
BpmI CTGGAG 6 cut(s) 15, 526, 817, 888, 1829, 1952
Bpu10I CCTNAGC 1 cut(s) 473
BpuEI CTTGAG 1 cut(s) 3225
BpuMI CCSGG 3 cut(s) 715, 741, 825
Bsa29I ATCGAT 1 cut(s) 1677
BsaAI YACGTR 1 cut(s) 3437
BsaBI GATNNNNATC 2 cut(s) 111, 1062
BsaI GGTCTC 3 cut(s) 376, 631, 1005
BsaJI CCNNGG 6 cut(s) 339, 677, 698, 740, 1951, 3108
BsaXI ACNNNNNCTCC 4 cut(s) 718, 748, 2973, 3003
Bse118I RCCGGY 1 cut(s) 877
Bse3DI GCAATG 5 cut(s) 1375, 1890, 2037, 2841, 3199
Bse8I GATNNNNATC 2 cut(s) 111, 1062
BseBI CCWGG 7 cut(s) 33, 621, 700, 1342, 1430, 1908, 3332
BseCI ATCGAT 1 cut(s) 1677
BseDI CCNNGG 6 cut(s) 339, 677, 698, 740, 1951, 3108
BseJI GATNNNNATC 2 cut(s) 111, 1062
BseMI GCAATG 5 cut(s) 1375, 1890, 2037, 2841, 3199
BseMII CTCAG 7 cut(s) 1019, 1365, 1443, 1784, 2928, 3485, 3519
BsePI GCGCGC 1 cut(s) 2081
BseRI GAGGAG 6 cut(s) 315, 474, 1339, 1825, 2914, 3128
BseXI GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3315, 3322
BseYI CCCAGC 1 cut(s) 226
BsgI GTGCAG 1 cut(s) 3631
Bsh1236I CGCG 1 cut(s) 2083
Bsh1285I CGRYCG 1 cut(s) 878
BshFI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3246, 3326
BshNI GGYRCC 2 cut(s) 1459, 2699
BshVI ATCGAT 1 cut(s) 1677
BsiEI CGRYCG 1 cut(s) 878
BsiHKAI GWGCWC 1 cut(s) 713
BsiHKCI CYCGRG 3 cut(s) 141, 246, 3419
BsiSI CCGG 5 cut(s) 14, 714, 740, 824, 878
BslFI GGGAC 3 cut(s) 447, 766, 2656
BsmAI GTCTC 7 cut(s) 376, 631, 969, 1005, 3243, 3474, 3570
BsmFI GGGAC 3 cut(s) 447, 766, 2656
BsmI GAATGC 1 cut(s) 1775
BsnI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3246, 3326
Bso31I GGTCTC 3 cut(s) 376, 631, 1005
BsoBI CYCGRG 3 cut(s) 141, 246, 3419
Bsp1286I GDGCHC 2 cut(s) 713, 2464
Bsp19I CCATGG 2 cut(s) 1951, 3108
BspACI CCGC 4 cut(s) 275, 2262, 2401, 3490
BspANI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3246, 3326
BspCNI CTCAG 7 cut(s) 1020, 1364, 1444, 1785, 2929, 3484, 3520
BspDI ATCGAT 1 cut(s) 1677
BspFNI CGCG 1 cut(s) 2083
BspHI TCATGA 4 cut(s) 1003, 1477, 1617, 2563
BspMI ACCTGC 1 cut(s) 943
BspPI GGATC 7 cut(s) 330, 1242, 1555, 1640, 1918, 2289, 2927
BspT107I GGYRCC 2 cut(s) 1459, 2699
BspTNI GGTCTC 3 cut(s) 376, 631, 1005
BsrDI GCAATG 5 cut(s) 1375, 1890, 2037, 2841, 3199
BsrFI RCCGGY 1 cut(s) 877
BssAI RCCGGY 1 cut(s) 877
BssECI CCNNGG 6 cut(s) 339, 677, 698, 740, 1951, 3108
BssHII GCGCGC 1 cut(s) 2081
BssSI CACGAG 2 cut(s) 2391, 3122
BssT1I CCWWGG 3 cut(s) 339, 1951, 3108
Bst2BI CACGAG 2 cut(s) 2391, 3122
Bst2UI CCWGG 7 cut(s) 33, 621, 700, 1342, 1430, 1908, 3332
BstBAI YACGTR 1 cut(s) 3437
BstC8I GCNNGC 2 cut(s) 535, 2083
BstDSI CCRYGG 2 cut(s) 1951, 3108
BstENI CCTNNNNNAGG 1 cut(s) 3212
BstFNI CGCG 1 cut(s) 2083
BstHHI GCGC 2 cut(s) 2083, 2085
BstMAI GTCTC 7 cut(s) 376, 631, 969, 1005, 3243, 3474, 3570
BstMCI CGRYCG 1 cut(s) 878
BstMWI GCNNNNNNNGC 6 cut(s) 2068, 2080, 2903, 3332, 3344, 3625
BstNI CCWGG 7 cut(s) 33, 621, 700, 1342, 1430, 1908, 3332
BstNSI RCATGY 1 cut(s) 1261
BstPAI GACNNNNGTC 1 cut(s) 3153
BstSFI CTRYAG 4 cut(s) 2727, 2928, 3390, 3582
BstUI CGCG 1 cut(s) 2083
BstV1I GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3315, 3322
BstV2I GAAGAC 6 cut(s) 189, 675, 1527, 1695, 2886, 2934
BstX2I RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
BstYI RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
Bsu15I ATCGAT 1 cut(s) 1677
BsuI GTATCC 2 cut(s) 938, 2440
BsuRI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3246, 3326
BsuTUI ATCGAT 1 cut(s) 1677
BtgI CCRYGG 2 cut(s) 1951, 3108
BtgZI GCGATG 1 cut(s) 3093
BtrI CACGTC 1 cut(s) 617
BtsIMutI CAGTG 8 cut(s) 841, 1285, 1524, 1899, 2121, 2748, 2881, 3269
BveI ACCTGC 1 cut(s) 943
Cac8I GCNNGC 2 cut(s) 535, 2083
CaiI CAGNNNCTG 2 cut(s) 2264, 3029
CciI TCATGA 4 cut(s) 1003, 1477, 1617, 2563
CfoI GCGC 2 cut(s) 2083, 2085
Cfr10I RCCGGY 1 cut(s) 877
Cfr13I GGNCC 4 cut(s) 24, 717, 2105, 3509
ClaI ATCGAT 1 cut(s) 1677
CseI GACGC 3 cut(s) 897, 2653, 3465
DrdI GACNNNNNNGTC 1 cut(s) 390
DseDI GACNNNNNNGTC 1 cut(s) 390
EaeI YGGCCR 2 cut(s) 1170, 1603
Eco130I CCWWGG 3 cut(s) 339, 1951, 3108
Eco24I GRGCYC 1 cut(s) 2464
Eco31I GGTCTC 3 cut(s) 376, 631, 1005
Eco32I GATATC 2 cut(s) 1537, 2962
Eco47I GGWCC 4 cut(s) 24, 717, 2105, 3509
Eco57I CTGAAG 9 cut(s) 149, 1431, 1662, 2228, 2340, 2568, 2661, 2679, 2766
Eco72I CACGTG 1 cut(s) 3437
Eco88I CYCGRG 3 cut(s) 141, 246, 3419
EcoNI CCTNNNNNAGG 1 cut(s) 3212
EcoO109I RGGNCCY 2 cut(s) 24, 3509
EcoRI GAATTC 2 cut(s) 1571, 1945
EcoRII CCWGG 7 cut(s) 31, 619, 698, 1340, 1428, 1906, 3330
EcoRV GATATC 2 cut(s) 1537, 2962
EcoT14I CCWWGG 3 cut(s) 339, 1951, 3108
EcoT38I GRGCYC 1 cut(s) 2464
ErhI CCWWGG 3 cut(s) 339, 1951, 3108
FalI AAGNNNNNCTT 4 cut(s) 739, 771, 1773, 1805
FaqI GGGAC 3 cut(s) 447, 766, 2656
FauNDI CATATG 2 cut(s) 886, 2290
FbaI TGATCA 2 cut(s) 1420, 1969
FblI GTMKAC 2 cut(s) 559, 3454
FriOI GRGCYC 1 cut(s) 2464
GlaI GCGC 2 cut(s) 2082, 2084
GsaI CCCAGC 1 cut(s) 230
GsuI CTGGAG 6 cut(s) 15, 526, 817, 888, 1829, 1952
HaeIII GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3246, 3326
HapII CCGG 5 cut(s) 14, 714, 740, 824, 878
HgaI GACGC 3 cut(s) 897, 2653, 3465
HhaI GCGC 2 cut(s) 2083, 2085
Hin6I GCGC 2 cut(s) 2081, 2083
HinP1I GCGC 2 cut(s) 2081, 2083
HincII GTYRAC 1 cut(s) 395
HindII GTYRAC 1 cut(s) 395
HpaII CCGG 5 cut(s) 14, 714, 740, 824, 878
HphI GGTGA 8 cut(s) 783, 924, 1067, 1673, 1830, 1933, 1967, 2063
Hpy166II GTNNAC 5 cut(s) 395, 560, 2108, 3383, 3455
Hpy8I GTNNAC 5 cut(s) 395, 560, 2108, 3383, 3455
Hpy99I CGWCG 1 cut(s) 1559
HpyCH4IV ACGT 5 cut(s) 562, 598, 616, 1557, 3436
HpyF10VI GCNNNNNNNGC 6 cut(s) 2068, 2080, 2903, 3332, 3344, 3625
HpySE526I ACGT 5 cut(s) 562, 598, 616, 1557, 3436
HspAI GCGC 2 cut(s) 2081, 2083
KpnI GGTACC 1 cut(s) 2703
Ksp22I TGATCA 2 cut(s) 1420, 1969
LmnI GCTCC 7 cut(s) 679, 739, 1201, 2327, 3017, 3311, 3358
Lsp1109I GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3315, 3322
LweI GCATC 9 cut(s) 797, 829, 947, 1333, 1870, 2761, 3073, 3213, 3493
MaeII ACGT 5 cut(s) 562, 598, 616, 1557, 3436
MaeIII GTNAC 8 cut(s) 260, 361, 434, 763, 1354, 1921, 2117, 3394
MfeI CAATTG 3 cut(s) 1590, 2592, 2845
MflI RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
MhlI GDGCHC 2 cut(s) 713, 2464
MlsI TGGCCA 1 cut(s) 1605
MluNI TGGCCA 1 cut(s) 1605
MlyI GAGTC 6 cut(s) 1064, 1457, 1918, 2948, 3245, 3572
MmeI TCCRAC 3 cut(s) 150, 992, 1285
Mox20I TGGCCA 1 cut(s) 1605
MscI TGGCCA 1 cut(s) 1605
MseI TTAA 4 cut(s) 270, 308, 1656, 2613
MslI CAYNNNNRTG 2 cut(s) 1002, 3653
Msp20I TGGCCA 1 cut(s) 1605
MspA1I CMGCKG 2 cut(s) 2264, 2401
MspI CCGG 5 cut(s) 14, 714, 740, 824, 878
MunI CAATTG 3 cut(s) 1590, 2592, 2845
Mva1269I GAATGC 1 cut(s) 1775
MvaI CCWGG 7 cut(s) 33, 621, 700, 1342, 1430, 1908, 3332
MvnI CGCG 1 cut(s) 2083
MwoI GCNNNNNNNGC 6 cut(s) 2068, 2080, 2903, 3332, 3344, 3625
NciI CCSGG 3 cut(s) 715, 741, 825
NcoI CCATGG 2 cut(s) 1951, 3108
NdeI CATATG 2 cut(s) 886, 2290
NmeAIII GCCGAG 2 cut(s) 62, 69
NmuCI GTSAC 4 cut(s) 260, 1354, 1921, 2117
NspI RCATGY 1 cut(s) 1261
PagI TCATGA 4 cut(s) 1003, 1477, 1617, 2563
PaqCI CACCTGC 1 cut(s) 943
PauI GCGCGC 1 cut(s) 2081
PciI ACATGT 1 cut(s) 1257
PctI GAATGC 1 cut(s) 1775
PflFI GACNNNGTC 1 cut(s) 1761
PflMI CCANNNNNTGG 1 cut(s) 3322
PfoI TCCNGGA 1 cut(s) 1340
PleI GAGTC 6 cut(s) 1064, 1456, 1918, 2947, 3244, 3571
PmaCI CACGTG 1 cut(s) 3437
PmlI CACGTG 1 cut(s) 3437
PpsI GAGTC 6 cut(s) 1064, 1456, 1918, 2947, 3244, 3571
Ppu21I YACGTR 1 cut(s) 3437
PpuMI RGGWCCY 2 cut(s) 24, 3509
PscI ACATGT 1 cut(s) 1257
PshAI GACNNNNGTC 1 cut(s) 3153
Psp5II RGGWCCY 2 cut(s) 24, 3509
Psp6I CCWGG 7 cut(s) 31, 619, 698, 1340, 1428, 1906, 3330
PspCI CACGTG 1 cut(s) 3437
PspFI CCCAGC 1 cut(s) 226
PspGI CCWGG 7 cut(s) 31, 619, 698, 1340, 1428, 1906, 3330
PspPI GGNCC 4 cut(s) 24, 717, 2105, 3509
PspPPI RGGWCCY 2 cut(s) 24, 3509
PstNI CAGNNNCTG 2 cut(s) 2264, 3029
PsuI RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
PsyI GACNNNGTC 1 cut(s) 1761
PteI GCGCGC 1 cut(s) 2081
RseI CAYNNNNRTG 2 cut(s) 1002, 3653
SaqAI TTAA 4 cut(s) 270, 308, 1656, 2613
Sau96I GGNCC 4 cut(s) 24, 717, 2105, 3509
ScaI AGTACT 2 cut(s) 727, 1724
SchI GAGTC 6 cut(s) 1064, 1457, 1918, 2948, 3245, 3572
SduI GDGCHC 2 cut(s) 713, 2464
SfaNI GCATC 9 cut(s) 797, 829, 947, 1333, 1870, 2761, 3073, 3213, 3493
SfcI CTRYAG 4 cut(s) 2727, 2928, 3390, 3582
SinI GGWCC 4 cut(s) 24, 717, 2105, 3509
SmiMI CAYNNNNRTG 2 cut(s) 1002, 3653
SmlI CTYRAG 1 cut(s) 3240
SmoI CTYRAG 1 cut(s) 3240
SsiI CCGC 4 cut(s) 275, 2262, 2401, 3490
SspI AATATT 2 cut(s) 820, 3402
StyI CCWWGG 3 cut(s) 339, 1951, 3108
TaiI ACGT 5 cut(s) 565, 601, 619, 1560, 3439
TaqI TCGA 7 cut(s) 78, 334, 388, 874, 1225, 1677, 2792
TaqII GACCGA 1 cut(s) 1119
TatI WGTACW 4 cut(s) 500, 725, 1722, 2759
TauI GCSGC 2 cut(s) 2264, 2404
Tru1I TTAA 4 cut(s) 270, 308, 1656, 2613
Tru9I TTAA 4 cut(s) 270, 308, 1656, 2613
TscAI CASTG 8 cut(s) 841, 1285, 1531, 1899, 2128, 2755, 2881, 3276
TseFI GTSAC 4 cut(s) 260, 1354, 1921, 2117
TseI GCWGC 8 cut(s) 444, 1365, 2071, 2234, 2264, 2801, 3303, 3335
Tsp45I GTSAC 4 cut(s) 260, 1354, 1921, 2117
TspGWI ACGGA 2 cut(s) 649, 2702
TspRI CASTG 8 cut(s) 841, 1285, 1531, 1899, 2128, 2755, 2881, 3276
Tth111I GACNNNGTC 1 cut(s) 1761
Van91I CCANNNNNTGG 1 cut(s) 3322
VpaK11BI GGWCC 4 cut(s) 24, 717, 2105, 3509
XagI CCTNNNNNAGG 1 cut(s) 3212
XapI RAATTY 4 cut(s) 1571, 1855, 1945, 2020
XbaI TCTAGA 2 cut(s) 911, 1765
XceI RCATGY 1 cut(s) 1261
XcmI CCANNNNNNNNNTGG 4 cut(s) 727, 1228, 1618, 2975
XmiI GTMKAC 2 cut(s) 559, 3454
ZrmI AGTACT 2 cut(s) 727, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.