Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0005237

Physical Location & Seq

Genomic Coordinates Forward (+)

10791102 .. 10796177

Gene Structure 5076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1140300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGAAGAGACATTTGTACCGTTTCGCGGAATTAAGAATGATCTTCGAGGGAGAATGATGTGTTACAAGCAAGATTGGACTGGTGGTTTCAAGGCAGGCTTCAGGATTTTGGCGCCCACCACTTATATCTTTTTTGCATCCGCTATTCCGGTTATTTCATTTGGAGAACAATTGGAAAGAGACACAGGTGGGGTTCTCACAGCGGTTCAAACATTAGCATCTACGGCTTTGTGTGGAATTATACACTCGATTCTTGGAGGACAGCCTTTGCTGATTCTCGGAGTTGCAGAGCCAACTGTGATTATGTACACGTTTATGTTCAATTTTGCCAAAAATAGACCGGAGCTGGGATCAAAGCTCTTTTTAGCATGGAGTGGATGGGTGTGCGTCTGGACTGCGGCATTGCTGTTTCTGCTGGCTATATTAGGGGCTTGCTCCATCATAAACAGATTCACTCGTCTTGCAGGAGAGTTATTTGGCCTTCTCATTGCAATGCTGTTCATGCAGGAAGCTATAAAAGGACTTGTTCATGAGTTCCACATACCTGAAAGAGAAAACCCAAATTCAGTTCAATTTCAACCTTCATGGAGATTTGCAAATGGGATGTTTGCTTTGGTTCTATCATTTGGCCTTCTACTTACTTCATTAAGAAGCAGAAAAGCAAGGTCTTGGCGTTATGGATCTGGCAAGTGTTATTTTGTTTGGAGATGGCTGCGAGGTTTCGTAGCAGATTATGGCGTGCCATTGATGGTATTGATCTGGTCTGCTGTTTCCTATATACCTGCTGGAAATGTCCCAAAAGGAATTCCAAGGCGCCTCTTCAGTCCAAATCCATGGTCACCTGGGGCATACGAAAATTGGACTGACATGCTAAATGTGCCAGTGCTTTATATAATTGGAGCTTTCATTCCAGCAACAATGATTGCAGTGTTGTACTATTTTGACCACAGTGTGGCTTCCCAACTTGCTCAGCAGAAAGAATTCAATTTGAGAAAACCACCTTCTTTCCATTACGATCTACTTCTCTTAGGGTTCATGGTCATAATATGTGGTCTCTTAGGCATTCCTCCATCCAATGGTGTCATACCACAATCTCCAATGCATACGAAAAGTTTGGCCACACTGAAGCACCAGTTGCTTCGCAATCGACTTGTAGCGACAGCAAGGAGATGTATGAGAAACAATGCCAGCTTGGAACAAGTATATGGAAGCATGCAAGAATCGTATCAACAGATGCAAACCCCACTAGTATACCAGGAACCTTCAGCTCGGGGATTAAATGACTTGAAAGATTCAACTGTTCAAATGGCTTCAAGCATGGGTCACATAGATGCCCCAGTTGATGAGACTGTGTTTGATGTTGAGAAGGAGATCGATGATTTATTGCCTGTTGAGGTGAAAGAGCAGCGGCTCAGCAACTTGCTTCAAGCTACATTTGTAGGAGGATGTGTTGCGGCCATGCCTTTTCTTAAAATGATCCCAACATCGGTACTCTGGGGTTATTTTGCCTTTATGGCTGTTGAGAACTTACCGGGTAACCAATGTTGGGAGAGGATTCTATTGCTCTTCACAGCCCCGACTAGAAGATACAAAGTACTTGAGGAATACCATGCCACTTTTGTCGAAACAGTACCATTCAAGACAATTGCAGCATTCACCATTTTCCAAACTGCTTACTTGCTTGTTTGCTTCGGAATTACATGGATTCCTATTGCTGGGGTTCTTTTCCCATTAATGATCATGCTTCTGGTTCCTGTTAGACAATACATTTTGCCCAAGTTCTTCAAAGGTGCACACCTTCAAGATTTAGATGCTGCAGAGTATGAAGAGGCACCTGCTTTACTATTCAACCACGCAACTGAGAGGGAGATGAGTAGGACAGCTTCATTTCCAGATGATGGCGAGATTTTAGATGGGATGGTTACTAGAAGCCGGGGCGAGATCAGGCATGTGTGCAGTCCTAAAGTGACAAGCTCACCTACAACATCATCCAAGGAATTGAAAAGCACACTGAGCTTCTCTGACAAGGTAATCAGTCCTCGTCTAAGCGAGCTGAGAGGCGACCAAAGTCCTCGGAGTGGCGGAAAAGGACCATTTAGTCCAAGGAGCGGAGAACCGAAATCATCTAACTTAGGGAAGAGTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0008509 GO:0009987 GO:0010036 GO:0012505 GO:0015075 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0097708 GO:0098656 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

716

Amino Acids

79.89

Weight (kDa)

8.94

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	7 - 181	2e-34	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	232 - 376	1.6e-20	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	464 - 606	1.7e-29	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06450 AT3G06450 AT3G06450 AT3G06450
fragaria_vesca	FvH4_4g21020 FvH4_4g21020 FvH4_4g21020 FvH4_4g21020
malus_domestica	MD16G1140300.v1.1
prunus_persica	Prupe.1G109900_v2.0.a1 Prupe.1G109900_v2.0.a1 Prupe.1G109900_v2.0.a1 Prupe.1G109900_v2.0.a1
pyrus_communis	pycom16g12440
rosa_chinensis	RchiOBHm_Chr4g0426551
rosa_laevigata	RLG00000007291
rosa_multiflora	Rmu_sc0001821.1_g000007
rosa_roxburghii	Rroxscaffold_5G00368560
rosa_rugosa	Rorug04G0212700 Rorug04G0212800 Rorug04G0212900 Rorug04G0213000 Rorug04G0213000 Rorug04G0213100
rosa_samantha	Rh4AG268400 Rh4BG274700 Rh4CG289100 Rh4DG271500
rosa_wichuraiana	Rw4G023290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1843
AasI	GACNNNNNNGTC	1 cut(s)	2097
Acc36I	ACCTGC	2 cut(s)	790, 1843
AccB1I	GGYRCC	3 cut(s)	112, 813, 1831
AccB7I	CCANNNNNTGG	3 cut(s)	952, 1076, 1898
AccBSI	CCGCTC	1 cut(s)	2109
AccI	GTMKAC	1 cut(s)	1251
AccII	CGCG	1 cut(s)	27
AciI	CCGC	8 cut(s)	27, 141, 203, 398, 1408, 1454, 2082, 2109
AclWI	GGATC	3 cut(s)	358, 688, 1471
AcoI	YGGCCR	2 cut(s)	1116, 1455
AcsI	RAATTY	3 cut(s)	562, 804, 980
AcuI	CTGAAG	4 cut(s)	85, 805, 1145, 1248
AcyI	GRCGYC	2 cut(s)	113, 814
AdeI	CACNNNGTG	1 cut(s)	952
AfaI	GTAC	6 cut(s)	18, 308, 935, 1491, 1596, 1632
AflIII	ACRYGT	1 cut(s)	309
AhlI	ACTAGT	1 cut(s)	1246
AjnI	CCWGG	2 cut(s)	841, 1254
Alw21I	GWGCWC	1 cut(s)	1795
Alw26I	GTCTC	4 cut(s)	2, 174, 1058, 1340
Alw44I	GTGCAC	1 cut(s)	1791
AlwI	GGATC	3 cut(s)	358, 688, 1471
Ama87I	CYCGRG	1 cut(s)	1269
AoxI	GGCC	4 cut(s)	478, 628, 1116, 1455
ApaLI	GTGCAC	1 cut(s)	1791
ApeKI	GCWGC	4 cut(s)	712, 1405, 1649, 1814
ApoI	RAATTY	3 cut(s)	562, 804, 980
ArsI	GACNNNNNNTTYG	2 cut(s)	821, 853
AseI	ATTAAT	1 cut(s)	1733
Asp700I	GAANNNNTTC	1 cut(s)	980
AspLEI	GCGC	2 cut(s)	115, 816
AspS9I	GGNCC	1 cut(s)	2090
AsuC2I	CCSGG	2 cut(s)	1533, 1934
AsuHPI	GGTGA	4 cut(s)	831, 1408, 1648, 1968
AvaI	CYCGRG	1 cut(s)	1269
AvaII	GGWCC	1 cut(s)	2090
BaeGI	GKGCMC	1 cut(s)	1795
BaeI	ACNNNNGTAYC	1 cut(s)	33
BalI	TGGCCA	1 cut(s)	1118
BanI	GGYRCC	3 cut(s)	112, 813, 1831
BarI	GAAGNNNNNNTAC	2 cut(s)	1867, 1899
Bbv12I	GWGCWC	1 cut(s)	1795
BbvI	GCAGC	4 cut(s)	699, 1417, 1661, 1801
BccI	CCATC	8 cut(s)	372, 446, 702, 742, 1078, 1892, 1907, 1912
BceAI	ACGGC	1 cut(s)	240
BciT130I	CCWGG	2 cut(s)	843, 1256
BclI	TGATCA	1 cut(s)	1737
BcnI	CCSGG	2 cut(s)	1533, 1934
BcoDI	GTCTC	4 cut(s)	2, 174, 1058, 1340
BcuI	ACTAGT	1 cut(s)	1246
BfaI	CTAG	3 cut(s)	1247, 1581, 1926
BfmI	CTRYAG	1 cut(s)	1815
BfoI	RGCGCY	2 cut(s)	116, 817
BfuAI	ACCTGC	2 cut(s)	790, 1843
BglI	GCCNNNNNGGC	1 cut(s)	1514
BisI	GCNGC	7 cut(s)	399, 713, 1406, 1409, 1455, 1650, 1815
BlpI	GCTNAGC	2 cut(s)	969, 1412
BlsI	GCNGC	7 cut(s)	400, 714, 1407, 1410, 1456, 1651, 1816
BmcAI	AGTACT	1 cut(s)	1596
Bme1390I	CCNGG	4 cut(s)	843, 1256, 1533, 1934
Bme18I	GGWCC	1 cut(s)	2090
BmeT110I	CYCGRG	1 cut(s)	1269
BmgT120I	GGNCC	1 cut(s)	2090
BmiI	GGNNCC	5 cut(s)	114, 815, 1260, 1752, 1833
BmrFI	CCNGG	4 cut(s)	843, 1256, 1533, 1934
BmrI	ACTGGG	1 cut(s)	1331
BmsI	GCATC	5 cut(s)	146, 227, 1224, 1321, 1801
BmuI	ACTGGG	1 cut(s)	1331
BoxI	GACNNNNGTC	1 cut(s)	2067
Bpu1102I	GCTNAGC	2 cut(s)	969, 1412
BpuEI	CTTGAG	1 cut(s)	1619
BpuMI	CCSGG	2 cut(s)	1533, 1934
Bsa29I	ATCGAT	1 cut(s)	1374
BsaHI	GRCGYC	2 cut(s)	113, 814
BsaI	GGTCTC	1 cut(s)	1058
BsaJI	CCNNGG	7 cut(s)	809, 833, 842, 1933, 1992, 2072, 2102
BsaWI	WCCGGW	2 cut(s)	148, 340
BsaXI	ACNNNNNCTCC	2 cut(s)	1434, 1464
Bse1I	ACTGG	4 cut(s)	85, 881, 1132, 1337
Bse3DI	GCAATG	3 cut(s)	401, 486, 498
BseBI	CCWGG	2 cut(s)	843, 1256
BseCI	ATCGAT	1 cut(s)	1374
BseDI	CCNNGG	7 cut(s)	809, 833, 842, 1933, 1992, 2072, 2102
BseGI	GGATG	7 cut(s)	137, 383, 609, 1070, 1451, 1923, 1988
BseMI	GCAATG	3 cut(s)	401, 486, 498
BseMII	CTCAG	5 cut(s)	983, 1426, 1851, 2003, 2045
BseNI	ACTGG	4 cut(s)	85, 881, 1132, 1337
BseSI	GKGCMC	1 cut(s)	1795
BseXI	GCAGC	4 cut(s)	699, 1417, 1661, 1801
BseYI	CCCAGC	2 cut(s)	346, 1715
BsgI	GTGCAG	1 cut(s)	1975
Bsh1236I	CGCG	1 cut(s)	27
BshFI	GGCC	4 cut(s)	480, 630, 1118, 1457
BshNI	GGYRCC	3 cut(s)	112, 813, 1831
BshVI	ATCGAT	1 cut(s)	1374
BsiHKAI	GWGCWC	1 cut(s)	1795
BsiHKCI	CYCGRG	1 cut(s)	1269
BsiSI	CCGG	4 cut(s)	149, 341, 1532, 1933
BslFI	GGGAC	1 cut(s)	779
BsmAI	GTCTC	4 cut(s)	2, 174, 1058, 1340
BsmFI	GGGAC	1 cut(s)	779
BsmI	GAATGC	2 cut(s)	1062, 1652
BsnI	GGCC	4 cut(s)	480, 630, 1118, 1457
Bso31I	GGTCTC	1 cut(s)	1058
BsoBI	CYCGRG	1 cut(s)	1269
Bsp1286I	GDGCHC	1 cut(s)	1795
Bsp1407I	TGTACA	1 cut(s)	306
Bsp143I	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
Bsp1720I	GCTNAGC	2 cut(s)	969, 1412
Bsp19I	CCATGG	1 cut(s)	833
BspACI	CCGC	8 cut(s)	27, 141, 203, 398, 1408, 1454, 2082, 2109
BspANI	GGCC	4 cut(s)	480, 630, 1118, 1457
BspCNI	CTCAG	5 cut(s)	982, 1425, 1852, 2004, 2046
BspDI	ATCGAT	1 cut(s)	1374
BspFNI	CGCG	1 cut(s)	27
BspHI	TCATGA	1 cut(s)	529
BspLI	GGNNCC	5 cut(s)	114, 815, 1260, 1752, 1833
BspMAI	CTGCAG	1 cut(s)	1819
BspMI	ACCTGC	2 cut(s)	790, 1843
BspPI	GGATC	3 cut(s)	358, 688, 1471
BspQI	GCTCTTC	1 cut(s)	1571
BspT107I	GGYRCC	3 cut(s)	112, 813, 1831
BspTNI	GGTCTC	1 cut(s)	1058
BsrBI	CCGCTC	1 cut(s)	2109
BsrDI	GCAATG	3 cut(s)	401, 486, 498
BsrGI	TGTACA	1 cut(s)	306
BsrI	ACTGG	4 cut(s)	85, 881, 1132, 1337
BssECI	CCNNGG	7 cut(s)	809, 833, 842, 1933, 1992, 2072, 2102
BssMI	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
BssNAI	GTATAC	1 cut(s)	1252
BssNI	GRCGYC	2 cut(s)	113, 814
BssT1I	CCWWGG	4 cut(s)	809, 833, 1992, 2102
Bst1107I	GTATAC	1 cut(s)	1252
Bst2UI	CCWGG	2 cut(s)	843, 1256
Bst4CI	ACNGT	6 cut(s)	21, 298, 950, 1300, 1351, 1630
Bst6I	CTCTTC	4 cut(s)	824, 1571, 1821, 2132
BstACI	GRCGYC	2 cut(s)	113, 814
BstAPI	GCANNNNNTGC	1 cut(s)	1135
BstAUI	TGTACA	1 cut(s)	306
BstC8I	GCNNGC	7 cut(s)	97, 417, 433, 740, 1189, 1214, 2051
BstDEI	CTNAG	9 cut(s)	969, 1027, 1057, 1412, 1860, 2012, 2045, 2054, 2131
BstDSI	CCRYGG	1 cut(s)	833
BstEII	GGTNACC	2 cut(s)	837, 1535
BstF5I	GGATG	7 cut(s)	137, 383, 609, 1070, 1451, 1923, 1988
BstFNI	CGCG	1 cut(s)	27
BstH2I	RGCGCY	2 cut(s)	116, 817
BstHHI	GCGC	2 cut(s)	115, 816
BstKTI	GATC	9 cut(s)	43, 353, 683, 759, 1018, 1374, 1479, 1740, 1944
BstMAI	GTCTC	4 cut(s)	2, 174, 1058, 1340
BstMBI	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
BstMWI	GCNNNNNNNGC	7 cut(s)	224, 412, 502, 877, 1135, 1514, 2013
BstNI	CCWGG	2 cut(s)	843, 1256
BstNSI	RCATGY	3 cut(s)	871, 1216, 1952
BstPAI	GACNNNNGTC	1 cut(s)	2067
BstPI	GGTNACC	2 cut(s)	837, 1535
BstSCI	CCNGG	4 cut(s)	841, 1254, 1531, 1932
BstSFI	CTRYAG	1 cut(s)	1815
BstSLI	GKGCMC	1 cut(s)	1795
BstUI	CGCG	1 cut(s)	27
BstV1I	GCAGC	4 cut(s)	699, 1417, 1661, 1801
BstX2I	RGATCY	1 cut(s)	680
BstXI	CCANNNNNNTGG	1 cut(s)	834
BstYI	RGATCY	1 cut(s)	680
BstZ17I	GTATAC	1 cut(s)	1252
Bsu15I	ATCGAT	1 cut(s)	1374
BsuRI	GGCC	4 cut(s)	480, 630, 1118, 1457
BsuTUI	ATCGAT	1 cut(s)	1374
BtgI	CCRYGG	1 cut(s)	833
BtsCI	GGATG	7 cut(s)	137, 383, 609, 1070, 1451, 1923, 1988
BtsI	GCAGTG	1 cut(s)	933
BtsIMutI	CAGTG	5 cut(s)	888, 933, 955, 1121, 2009
BveI	ACCTGC	2 cut(s)	790, 1843
Cac8I	GCNNGC	7 cut(s)	97, 417, 433, 740, 1189, 1214, 2051
CciI	TCATGA	1 cut(s)	529
CfoI	GCGC	2 cut(s)	115, 816
Cfr13I	GGNCC	1 cut(s)	2090
ClaI	ATCGAT	1 cut(s)	1374
CseI	GACGC	1 cut(s)	376
Csp6I	GTAC	6 cut(s)	17, 307, 934, 1490, 1595, 1631
CviQI	GTAC	6 cut(s)	17, 307, 934, 1490, 1595, 1631
DdeI	CTNAG	9 cut(s)	969, 1027, 1057, 1412, 1860, 2012, 2045, 2054, 2131
DinI	GGCGCC	2 cut(s)	114, 815
DpnI	GATC	9 cut(s)	42, 352, 682, 758, 1017, 1373, 1478, 1739, 1943
DpnII	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
DraIII	CACNNNGTG	1 cut(s)	952
DrdI	GACNNNNNNGTC	1 cut(s)	2097
DseDI	GACNNNNNNGTC	1 cut(s)	2097
EaeI	YGGCCR	2 cut(s)	1116, 1455
Eam1104I	CTCTTC	4 cut(s)	824, 1571, 1821, 2132
EarI	CTCTTC	4 cut(s)	824, 1571, 1821, 2132
EciI	GGCGGA	1 cut(s)	2097
Eco130I	CCWWGG	4 cut(s)	809, 833, 1992, 2102
Eco31I	GGTCTC	1 cut(s)	1058
Eco47I	GGWCC	1 cut(s)	2090
Eco57I	CTGAAG	4 cut(s)	85, 805, 1145, 1248
Eco88I	CYCGRG	1 cut(s)	1269
Eco91I	GGTNACC	2 cut(s)	837, 1535
EcoO65I	GGTNACC	2 cut(s)	837, 1535
EcoRI	GAATTC	2 cut(s)	804, 980
EcoRII	CCWGG	2 cut(s)	841, 1254
EcoT14I	CCWWGG	4 cut(s)	809, 833, 1992, 2102
EcoT22I	ATGCAT	1 cut(s)	1104
EgeI	GGCGCC	2 cut(s)	114, 815
EheI	GGCGCC	2 cut(s)	114, 815
ErhI	CCWWGG	4 cut(s)	809, 833, 1992, 2102
FalI	AAGNNNNNCTT	2 cut(s)	83, 115
FaqI	GGGAC	1 cut(s)	779
FbaI	TGATCA	1 cut(s)	1737
FblI	GTMKAC	1 cut(s)	1251
Fnu4HI	GCNGC	7 cut(s)	399, 713, 1406, 1409, 1455, 1650, 1815
FokI	GGATG	7 cut(s)	124, 390, 616, 1057, 1458, 1930, 1975
Fsp4HI	GCNGC	7 cut(s)	399, 713, 1406, 1409, 1455, 1650, 1815
FspBI	CTAG	3 cut(s)	1247, 1581, 1926
GlaI	GCGC	2 cut(s)	114, 815
GluI	GCNGC	7 cut(s)	399, 713, 1406, 1409, 1455, 1650, 1815
GsaI	CCCAGC	2 cut(s)	350, 1719
HaeII	RGCGCY	2 cut(s)	116, 817
HaeIII	GGCC	4 cut(s)	480, 630, 1118, 1457
HapII	CCGG	4 cut(s)	149, 341, 1532, 1933
HgaI	GACGC	1 cut(s)	376
HhaI	GCGC	2 cut(s)	115, 816
Hin1I	GRCGYC	2 cut(s)	113, 814
Hin6I	GCGC	2 cut(s)	113, 814
HinP1I	GCGC	2 cut(s)	113, 814
HinfI	GANTC	7 cut(s)	250, 274, 450, 1220, 1292, 1555, 1705
HpaII	CCGG	4 cut(s)	149, 341, 1532, 1933
HphI	GGTGA	4 cut(s)	831, 1408, 1648, 1968
Hpy166II	GTNNAC	3 cut(s)	309, 1252, 1793
Hpy188I	TCNGA	4 cut(s)	281, 1694, 2023, 2076
Hpy188III	TCNNGA	6 cut(s)	103, 391, 530, 1639, 1802, 1892
Hpy8I	GTNNAC	3 cut(s)	309, 1252, 1793
HpyAV	CCTTC	7 cut(s)	491, 591, 641, 1011, 1272, 1360, 1808
HpyCH4III	ACNGT	6 cut(s)	21, 298, 950, 1300, 1351, 1630
HpyCH4IV	ACGT	1 cut(s)	311
HpyF10VI	GCNNNNNNNGC	7 cut(s)	224, 412, 502, 877, 1135, 1514, 2013
HpyF3I	CTNAG	9 cut(s)	969, 1027, 1057, 1412, 1860, 2012, 2045, 2054, 2131
HpySE526I	ACGT	1 cut(s)	311
Hsp92I	GRCGYC	2 cut(s)	113, 814
HspAI	GCGC	2 cut(s)	113, 814
KasI	GGCGCC	2 cut(s)	112, 813
Ksp22I	TGATCA	1 cut(s)	1737
Kzo9I	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
LguI	GCTCTTC	1 cut(s)	1571
LmnI	GCTCC	4 cut(s)	343, 440, 899, 2106
Lsp1109I	GCAGC	4 cut(s)	699, 1417, 1661, 1801
LweI	GCATC	5 cut(s)	146, 227, 1224, 1321, 1801
MaeI	CTAG	3 cut(s)	1247, 1581, 1926
MaeII	ACGT	1 cut(s)	311
MaeIII	GTNAC	6 cut(s)	62, 837, 1322, 1535, 1921, 1966
MalI	GATC	9 cut(s)	42, 352, 682, 758, 1017, 1373, 1478, 1739, 1943
MbiI	CCGCTC	1 cut(s)	2109
MboI	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
MboII	GAAGA	7 cut(s)	17, 35, 811, 1558, 1596, 1774, 1838
MfeI	CAATTG	2 cut(s)	170, 1644
MflI	RGATCY	1 cut(s)	680
MhlI	GDGCHC	1 cut(s)	1795
MlsI	TGGCCA	1 cut(s)	1118
MluNI	TGGCCA	1 cut(s)	1118
Mly113I	GGCGCC	2 cut(s)	113, 814
Mox20I	TGGCCA	1 cut(s)	1118
Mph1103I	ATGCAT	1 cut(s)	1104
MroXI	GAANNNNTTC	1 cut(s)	980
MscI	TGGCCA	1 cut(s)	1118
MseI	TTAA	5 cut(s)	33, 647, 1277, 1470, 1733
MslI	CAYNNNNRTG	3 cut(s)	314, 491, 1329
Msp20I	TGGCCA	1 cut(s)	1118
MspA1I	CMGCKG	2 cut(s)	203, 1408
MspI	CCGG	4 cut(s)	149, 341, 1532, 1933
MspR9I	CCNGG	4 cut(s)	843, 1256, 1533, 1934
MunI	CAATTG	2 cut(s)	170, 1644
Mva1269I	GAATGC	2 cut(s)	1062, 1652
MvaI	CCWGG	2 cut(s)	843, 1256
MvnI	CGCG	1 cut(s)	27
MwoI	GCNNNNNNNGC	7 cut(s)	224, 412, 502, 877, 1135, 1514, 2013
NarI	GGCGCC	2 cut(s)	113, 814
NciI	CCSGG	2 cut(s)	1533, 1934
NcoI	CCATGG	1 cut(s)	833
NdeII	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
NlaIV	GGNNCC	5 cut(s)	114, 815, 1260, 1752, 1833
NmuCI	GTSAC	3 cut(s)	837, 1322, 1966
NsiI	ATGCAT	1 cut(s)	1104
NspI	RCATGY	3 cut(s)	871, 1216, 1952
PaeI	GCATGC	1 cut(s)	1216
PagI	TCATGA	1 cut(s)	529
PaqCI	CACCTGC	1 cut(s)	1843
PciSI	GCTCTTC	1 cut(s)	1571
PctI	GAATGC	2 cut(s)	1062, 1652
PdmI	GAANNNNTTC	1 cut(s)	980
PfeI	GAWTC	7 cut(s)	250, 274, 450, 1220, 1292, 1555, 1705
PflMI	CCANNNNNTGG	3 cut(s)	952, 1076, 1898
PkrI	GCNGC	7 cut(s)	400, 714, 1407, 1410, 1456, 1651, 1816
PluTI	GGCGCC	2 cut(s)	116, 817
PshAI	GACNNNNGTC	1 cut(s)	2067
PshBI	ATTAAT	1 cut(s)	1733
Psp6I	CCWGG	2 cut(s)	841, 1254
PspEI	GGTNACC	2 cut(s)	837, 1535
PspFI	CCCAGC	2 cut(s)	346, 1715
PspGI	CCWGG	2 cut(s)	841, 1254
PspN4I	GGNNCC	5 cut(s)	114, 815, 1260, 1752, 1833
PspPI	GGNCC	1 cut(s)	2090
PstI	CTGCAG	1 cut(s)	1819
PsuI	RGATCY	1 cut(s)	680
RsaI	GTAC	6 cut(s)	18, 308, 935, 1491, 1596, 1632
RsaNI	GTAC	6 cut(s)	17, 307, 934, 1490, 1595, 1631
RseI	CAYNNNNRTG	3 cut(s)	314, 491, 1329
SapI	GCTCTTC	1 cut(s)	1571
SaqAI	TTAA	5 cut(s)	33, 647, 1277, 1470, 1733
SatI	GCNGC	7 cut(s)	399, 713, 1406, 1409, 1455, 1650, 1815
Sau3AI	GATC	9 cut(s)	40, 350, 680, 756, 1015, 1371, 1476, 1737, 1941
Sau96I	GGNCC	1 cut(s)	2090
ScaI	AGTACT	1 cut(s)	1596
ScrFI	CCNGG	4 cut(s)	843, 1256, 1533, 1934
SduI	GDGCHC	1 cut(s)	1795
SfaNI	GCATC	5 cut(s)	146, 227, 1224, 1321, 1801
SfcI	CTRYAG	1 cut(s)	1815
SfoI	GGCGCC	2 cut(s)	114, 815
SinI	GGWCC	1 cut(s)	2090
SmiMI	CAYNNNNRTG	3 cut(s)	314, 491, 1329
SmlI	CTYRAG	1 cut(s)	1598
SmoI	CTYRAG	1 cut(s)	1598
SpeI	ACTAGT	1 cut(s)	1246
SphI	GCATGC	1 cut(s)	1216
SsiI	CCGC	8 cut(s)	27, 141, 203, 398, 1408, 1454, 2082, 2109
SspDI	GGCGCC	2 cut(s)	112, 813
SspMI	CTAG	3 cut(s)	1247, 1581, 1926
StyD4I	CCNGG	4 cut(s)	841, 1254, 1531, 1932
StyI	CCWWGG	4 cut(s)	809, 833, 1992, 2102
TaaI	ACNGT	6 cut(s)	21, 298, 950, 1300, 1351, 1630
TaiI	ACGT	1 cut(s)	314
TaqI	TCGA	5 cut(s)	46, 248, 1147, 1374, 1623
TatI	WGTACW	3 cut(s)	306, 933, 1594
TauI	GCSGC	3 cut(s)	401, 1411, 1457
TfiI	GAWTC	7 cut(s)	250, 274, 450, 1220, 1292, 1555, 1705
Tru1I	TTAA	5 cut(s)	33, 647, 1277, 1470, 1733
Tru9I	TTAA	5 cut(s)	33, 647, 1277, 1470, 1733
TscAI	CASTG	5 cut(s)	888, 933, 955, 1128, 2016
TseFI	GTSAC	3 cut(s)	837, 1322, 1966
TseI	GCWGC	4 cut(s)	712, 1405, 1649, 1814
Tsp45I	GTSAC	3 cut(s)	837, 1322, 1966
TspDTI	ATGAA	9 cut(s)	147, 490, 518, 573, 633, 895, 1024, 1839, 1875
TspRI	CASTG	5 cut(s)	888, 933, 955, 1128, 2016
Van91I	CCANNNNNTGG	3 cut(s)	952, 1076, 1898
VneI	GTGCAC	1 cut(s)	1791
VpaK11BI	GGWCC	1 cut(s)	2090
VspI	ATTAAT	1 cut(s)	1733
XapI	RAATTY	3 cut(s)	562, 804, 980
XceI	RCATGY	3 cut(s)	871, 1216, 1952
XmiI	GTMKAC	1 cut(s)	1251
XmnI	GAANNNNTTC	1 cut(s)	980
XspI	CTAG	3 cut(s)	1247, 1581, 1926
ZrmI	AGTACT	1 cut(s)	1596
Zsp2I	ATGCAT	1 cut(s)	1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.