Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0005237

Physical Location & Seq

Genomic Coordinates Reverse (-)

58520334 .. 58524205

Gene Structure 3872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG268400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGAAGAGACATTTGTACCGTTTCGTGGAATCAGGAATGATCTTCGAGGGAGGTTGAGTTGTTACAAGCAAGACTGGACTGGTGGTTTCCGGGCAGGCTTCAGGATTTTGGCTCCCACCACATACATATTTTTCGCTTCAGCTATTCCAGTTATTTCATTTGGAGAACAATTAGAAAGAGAGACGGACGGGGTTCTAACAGCAGTTCAAACATTATCATCTACGGCTTTATGTGGAATAATACACTCAATACTTGGGGGTCAGCCTCTGTTGATTCTTGGGGTTGCAGAGCCAACTGTTATTATGTACACATTCATGTTTAATTTTGCTAAAAATAGGCCGGAGTTGGGATCAAAGCTCTTCTTAGCATGGACTGCATGGGTATGCATGTGGACGGCAATACTGTTGTTCCTGCTGGCTATATTAGGGGCTTGCTCCATTATAAACAGATTCACTCGTCTTGCGGGAGAGTTATTTGGCCTTCTTATTGCAATGCTCTTCATGCAGGAAGCTATCAAAGGACTTGTTGAGGAGTTTCGCATACCTGAAAGAGAGAACCCAAATTCAATTCAATTTCAACCTTCATGGAGATTTGCAAATGGGATGTTTGCTTTGGTTCTGTCATTTGGTCTTCTACTAACTTCTTTGAAAAGCAGAAAAGCAAGGTCTTGGCGATATGGGTCTGGGTCACTACGAGGTTTCATAGCAGATTATGGTGTGCCACTGATGGTTTTGATCTGGTCCGCCATTTCCTATATACCAGCTGGAAGTGGAAGTGTTCCAAAAGAAATTCCAAGGCGCCTCTTCAGTCCAAATCCATGGTCACCAGGAGCTTACGAGAATTGGACTGTCGTCAAGGACATGCTAAATGTGCCAGTGCTGTATATAATTGGAGCATTCATTCCAGCAACAATGATTGCGGTGCTGTATTATTTTGACCATAGTGTAGCTTCTCAACTGGCTCAGCAGAAAGAATTTAATTTGAGAAAGCCACCTTCTTTCCATTATGATCTACTTCTTTTGGGATTCATGGTCATAATATGTGGTCTGATAGGTATACCTCCAGCCAATGGTGTCATACCACAATCTCCAATGCATACTAGAAGTTTGGCCACACTGAAACATCAGTTACTTCGCAATCGACTTGTAACAGCAGCAAGGAAATGTATGAGAAACAATGCAAGCTTGGGTCAAGTATATGGAAGCATGCAAGAAGCATATCAACATATGCAAACCCCACTAATATATCAGGAACCTTCAGCTCAGGGGCTAAAGGAATTGAAGGATTCAACTATTCAAATGGCTTCAAGCATGGGAAACATAAATGCTCCAGTTGATGAGACAGTGTTTGATGTTGAGAAAGAGATAGATGATTTATTACCTGTTGAGGTGAAAGAACAGCGGCTCAGCAACTTGCTTCAAGCTATAATTGTAGGAGCATGTGTTGGAGCCATGCCTTTTCTTAAAAAGATCCCAACTTCAGTACTCTGGGGTTATTTTGCCTTCATGGCGGTTGAAAGCTTACCGGGCAACCAGTTTTGGGAGAGGATTCTTTTGCTCTTCACGGCTCCAAGTAGAAGATACAAAGTCCTTGAGGAATACCATGCCACTTTTGTGGAAACAGTACCATTCAAGATGATTGCAGCATTTACAGTTTTCCAAACTGTGTACTTGCTTGTTTGTTTTGGAATTACATGGATACCTATTGCTGGGGTTCTCTTCCCATTAATGATCATGCTCCTGGTTCCTGTTAGACAATACATATTGCCAAAGTTCTTCAAAGGGGCACACCTTCAAGATTTAGATGCCTCAGAGTATGAAGAGGCACCTGCTGTATCATTCAACCTTGCAACTGAACGGGAGATGAGTAGGGCGGCATCATTTGCAGACGACGGAGAAATTTTAGATGGGGTAATGACTAGAAGCCGGGGTGAGATCAGGCATGTGTGTAGTCCTAAAATTACAAGCTCAACTACAACACCATCCAAGGAATTCACATGTATACAGAGCCCACTGTTCTCAGATAAGATATACAGTCCTCATCTCAGTGAGCTGAGAGTTGGGCAAAGTCCTCGGAACAGTGGAAAAGGGGAGTTTAGCCAAAGAACTGGACAGACAAAACCATCTAGTTTAGGGAAGGGTAAACCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0008509 GO:0009987 GO:0010036 GO:0012505 GO:0015075 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0097708 GO:0098656 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

716

Amino Acids

79.93

Weight (kDa)

8.96

Isoelectric Point (pI)

43.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	7 - 180	1.1e-35	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	201 - 374	2.2e-23	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	462 - 604	2e-30	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06450 AT3G06450 AT3G06450 AT3G06450
fragaria_vesca	FvH4_4g21020 FvH4_4g21020 FvH4_4g21020 FvH4_4g21020
malus_domestica	MD16G1140300.v1.1
prunus_persica	Prupe.1G109900_v2.0.a1 Prupe.1G109900_v2.0.a1 Prupe.1G109900_v2.0.a1 Prupe.1G109900_v2.0.a1
pyrus_communis	pycom16g12440
rosa_chinensis	RchiOBHm_Chr4g0426551
rosa_laevigata	RLG00000007291
rosa_multiflora	Rmu_sc0001821.1_g000007
rosa_roxburghii	Rroxscaffold_5G00368560
rosa_rugosa	Rorug04G0212700 Rorug04G0212800 Rorug04G0212900 Rorug04G0213000 Rorug04G0213000 Rorug04G0213100
rosa_samantha	Rh4AG268400 Rh4BG274700 Rh4CG289100 Rh4DG271500
rosa_wichuraiana	Rw4G023290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	443
AarI	CACCTGC	1 cut(s)	1837
Acc36I	ACCTGC	1 cut(s)	1837
AccB1I	GGYRCC	2 cut(s)	798, 1825
AccB7I	CCANNNNNTGG	1 cut(s)	1070
AccI	GTMKAC	2 cut(s)	1057, 2002
AciI	CCGC	6 cut(s)	464, 744, 920, 1402, 1511, 1874
AclWI	GGATC	2 cut(s)	358, 1465
AcoI	YGGCCR	1 cut(s)	1110
AcsI	RAATTY	5 cut(s)	562, 789, 974, 1899, 1991
AcuI	CTGAAG	5 cut(s)	85, 123, 790, 1242, 1464
AcyI	GRCGYC	1 cut(s)	799
AfaI	GTAC	5 cut(s)	18, 308, 1485, 1626, 1670
AfiI	CCNNNNNNNGG	5 cut(s)	26, 347, 1070, 1540, 1709
AflIII	ACRYGT	1 cut(s)	1997
AjnI	CCWGG	2 cut(s)	826, 1740
AleI	CACNNNNGTG	1 cut(s)	1613
Alw26I	GTCTC	3 cut(s)	2, 176, 1334
AlwI	GGATC	2 cut(s)	358, 1465
AlwNI	CAGNNNCTG	1 cut(s)	268
AoxI	GGCC	3 cut(s)	338, 478, 1110
ApeKI	GCWGC	2 cut(s)	1154, 1643
ApoI	RAATTY	5 cut(s)	562, 789, 974, 1899, 1991
ArsI	GACNNNNNNTTYG	2 cut(s)	806, 838
AseI	ATTAAT	1 cut(s)	1727
AspLEI	GCGC	1 cut(s)	801
AspS9I	GGNCC	1 cut(s)	741
AsuC2I	CCSGG	3 cut(s)	92, 1527, 1928
AsuHPI	GGTGA	3 cut(s)	816, 1402, 1943
AvaII	GGWCC	1 cut(s)	741
BaeGI	GKGCMC	1 cut(s)	1789
BaeI	ACNNNNGTAYC	1 cut(s)	33
BalI	TGGCCA	1 cut(s)	1112
BanI	GGYRCC	2 cut(s)	798, 1825
BanII	GRGCYC	1 cut(s)	2012
BbsI	GAAGAC	1 cut(s)	623
BbvI	GCAGC	2 cut(s)	1166, 1655
BccI	CCATC	4 cut(s)	721, 1901, 1990, 2131
BceAI	ACGGC	3 cut(s)	240, 411, 1581
BcgI	CGANNNNNNTGC	2 cut(s)	2054, 2088
BciT130I	CCWGG	2 cut(s)	828, 1742
BciVI	GTATCC	1 cut(s)	1692
BclI	TGATCA	1 cut(s)	1731
BcnI	CCSGG	3 cut(s)	92, 1527, 1928
BcoDI	GTCTC	3 cut(s)	2, 176, 1334
BfaI	CTAG	3 cut(s)	1101, 1920, 2127
BfoI	RGCGCY	1 cut(s)	802
BfuAI	ACCTGC	1 cut(s)	1837
BfuI	GTATCC	1 cut(s)	1692
BglI	GCCNNNNNGGC	1 cut(s)	1508
BisI	GCNGC	4 cut(s)	1155, 1403, 1644, 1875
BlpI	GCTNAGC	2 cut(s)	963, 1406
BlsI	GCNGC	4 cut(s)	1156, 1404, 1645, 1876
BmcAI	AGTACT	1 cut(s)	1485
Bme1390I	CCNGG	5 cut(s)	92, 828, 1527, 1742, 1928
Bme18I	GGWCC	1 cut(s)	741
BmgT120I	GGNCC	1 cut(s)	741
BmiI	GGNNCC	7 cut(s)	114, 800, 1254, 1450, 1569, 1746, 1827
BmrFI	CCNGG	5 cut(s)	92, 828, 1527, 1742, 1928
BmsI	GCATC	2 cut(s)	1795, 1886
BoxI	GACNNNNGTC	1 cut(s)	851
BpiI	GAAGAC	1 cut(s)	623
BpmI	CTGGAG	2 cut(s)	1047, 1314
Bpu10I	CCTNAGC	1 cut(s)	1263
Bpu1102I	GCTNAGC	2 cut(s)	963, 1406
BpuEI	CTTGAG	1 cut(s)	1613
BpuMI	CCSGG	3 cut(s)	92, 1527, 1928
BsaHI	GRCGYC	1 cut(s)	799
BsaJI	CCNNGG	5 cut(s)	794, 818, 1927, 1986, 2072
BsaXI	ACNNNNNCTCC	4 cut(s)	43, 73, 1428, 1458
Bsc4I	CCNNNNNNNGG	5 cut(s)	26, 347, 1070, 1540, 1709
Bse1I	ACTGG	8 cut(s)	80, 85, 149, 875, 963, 1331, 1534, 2113
Bse3DI	GCAATG	1 cut(s)	498
BseBI	CCWGG	2 cut(s)	828, 1742
BseDI	CCNNGG	5 cut(s)	794, 818, 1927, 1986, 2072
BseGI	GGATG	2 cut(s)	609, 1982
BseLI	CCNNNNNNNGG	5 cut(s)	26, 347, 1070, 1540, 1709
BseMI	GCAATG	1 cut(s)	498
BseMII	CTCAG	7 cut(s)	977, 1277, 1420, 1824, 2034, 2045, 2059
BseNI	ACTGG	8 cut(s)	80, 85, 149, 875, 963, 1331, 1534, 2113
BseRI	GAGGAG	1 cut(s)	545
BseSI	GKGCMC	1 cut(s)	1789
BseXI	GCAGC	2 cut(s)	1166, 1655
BseYI	CCCAGC	1 cut(s)	1709
BshFI	GGCC	3 cut(s)	340, 480, 1112
BshNI	GGYRCC	2 cut(s)	798, 1825
BsiSI	CCGG	4 cut(s)	91, 341, 1526, 1927
BslI	CCNNNNNNNGG	5 cut(s)	26, 347, 1070, 1540, 1709
BsmAI	GTCTC	3 cut(s)	2, 176, 1334
BsmBI	CGTCTC	1 cut(s)	176
BsmI	GAATGC	1 cut(s)	896
BsnI	GGCC	3 cut(s)	340, 480, 1112
Bsp1286I	GDGCHC	2 cut(s)	1789, 2012
Bsp1407I	TGTACA	1 cut(s)	306
Bsp143I	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
Bsp1720I	GCTNAGC	2 cut(s)	963, 1406
Bsp19I	CCATGG	1 cut(s)	818
BspACI	CCGC	6 cut(s)	464, 744, 920, 1402, 1511, 1874
BspANI	GGCC	3 cut(s)	340, 480, 1112
BspCNI	CTCAG	7 cut(s)	976, 1276, 1419, 1823, 2033, 2046, 2058
BspLI	GGNNCC	7 cut(s)	114, 800, 1254, 1450, 1569, 1746, 1827
BspMI	ACCTGC	1 cut(s)	1837
BspPI	GGATC	2 cut(s)	358, 1465
BspQI	GCTCTTC	3 cut(s)	365, 503, 1565
BspT107I	GGYRCC	2 cut(s)	798, 1825
BsrDI	GCAATG	1 cut(s)	498
BsrGI	TGTACA	1 cut(s)	306
BsrI	ACTGG	8 cut(s)	80, 85, 149, 875, 963, 1331, 1534, 2113
BssECI	CCNNGG	5 cut(s)	794, 818, 1927, 1986, 2072
BssMI	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
BssNAI	GTATAC	2 cut(s)	1058, 2003
BssNI	GRCGYC	1 cut(s)	799
BssT1I	CCWWGG	3 cut(s)	794, 818, 1986
Bst1107I	GTATAC	2 cut(s)	1058, 2003
Bst2UI	CCWGG	2 cut(s)	828, 1742
Bst6I	CTCTTC	6 cut(s)	365, 503, 809, 1565, 1724, 1815
BstACI	GRCGYC	1 cut(s)	799
BstAPI	GCANNNNNTGC	2 cut(s)	374, 1883
BstAUI	TGTACA	1 cut(s)	306
BstC8I	GCNNGC	5 cut(s)	97, 417, 433, 1183, 1208
BstDEI	CTNAG	9 cut(s)	364, 963, 1263, 1406, 1810, 2020, 2045, 2054, 2148
BstDSI	CCRYGG	1 cut(s)	818
BstEII	GGTNACC	1 cut(s)	822
BstF5I	GGATG	2 cut(s)	609, 1982
BstH2I	RGCGCY	1 cut(s)	802
BstHHI	GCGC	1 cut(s)	801
BstKTI	GATC	7 cut(s)	43, 353, 738, 1012, 1473, 1734, 1938
BstMAI	GTCTC	3 cut(s)	2, 176, 1334
BstMBI	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
BstMWI	GCNNNNNNNGC	6 cut(s)	374, 502, 871, 1508, 1527, 1883
BstNI	CCWGG	2 cut(s)	828, 1742
BstNSI	RCATGY	6 cut(s)	391, 865, 1210, 1443, 1946, 2001
BstPAI	GACNNNNGTC	1 cut(s)	851
BstPI	GGTNACC	1 cut(s)	822
BstSCI	CCNGG	5 cut(s)	90, 826, 1525, 1740, 1926
BstSLI	GKGCMC	1 cut(s)	1789
BstV1I	GCAGC	2 cut(s)	1166, 1655
BstV2I	GAAGAC	1 cut(s)	623
BstX2I	RGATCY	1 cut(s)	1470
BstXI	CCANNNNNNTGG	3 cut(s)	819, 1615, 2108
BstYI	RGATCY	1 cut(s)	1470
BstZ17I	GTATAC	2 cut(s)	1058, 2003
BsuI	GTATCC	1 cut(s)	1692
BsuRI	GGCC	3 cut(s)	340, 480, 1112
BtgI	CCRYGG	1 cut(s)	818
BtsCI	GGATG	2 cut(s)	609, 1982
BtsIMutI	CAGTG	7 cut(s)	722, 882, 1115, 1350, 2012, 2053, 2086
BveI	ACCTGC	1 cut(s)	1837
Cac8I	GCNNGC	5 cut(s)	97, 417, 433, 1183, 1208
CaiI	CAGNNNCTG	1 cut(s)	268
CfoI	GCGC	1 cut(s)	801
Cfr13I	GGNCC	1 cut(s)	741
Csp6I	GTAC	5 cut(s)	17, 307, 1484, 1625, 1669
CviQI	GTAC	5 cut(s)	17, 307, 1484, 1625, 1669
DdeI	CTNAG	9 cut(s)	364, 963, 1263, 1406, 1810, 2020, 2045, 2054, 2148
DinI	GGCGCC	1 cut(s)	800
DpnI	GATC	7 cut(s)	42, 352, 737, 1011, 1472, 1733, 1937
DpnII	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
EaeI	YGGCCR	1 cut(s)	1110
Eam1104I	CTCTTC	6 cut(s)	365, 503, 809, 1565, 1724, 1815
EarI	CTCTTC	6 cut(s)	365, 503, 809, 1565, 1724, 1815
EciI	GGCGGA	1 cut(s)	733
Eco130I	CCWWGG	3 cut(s)	794, 818, 1986
Eco24I	GRGCYC	1 cut(s)	2012
Eco47I	GGWCC	1 cut(s)	741
Eco57I	CTGAAG	5 cut(s)	85, 123, 790, 1242, 1464
Eco91I	GGTNACC	1 cut(s)	822
EcoO65I	GGTNACC	1 cut(s)	822
EcoRI	GAATTC	1 cut(s)	1991
EcoRII	CCWGG	2 cut(s)	826, 1740
EcoT14I	CCWWGG	3 cut(s)	794, 818, 1986
EcoT22I	ATGCAT	2 cut(s)	389, 1098
EcoT38I	GRGCYC	1 cut(s)	2012
EgeI	GGCGCC	1 cut(s)	800
EheI	GGCGCC	1 cut(s)	800
ErhI	CCWWGG	3 cut(s)	794, 818, 1986
Esp3I	CGTCTC	1 cut(s)	176
FalI	AAGNNNNNCTT	2 cut(s)	347, 379
FauI	CCCGC	1 cut(s)	457
FauNDI	CATATG	1 cut(s)	1227
FbaI	TGATCA	1 cut(s)	1731
FblI	GTMKAC	2 cut(s)	1057, 2002
Fnu4HI	GCNGC	4 cut(s)	1155, 1403, 1644, 1875
FokI	GGATG	2 cut(s)	616, 1969
FriOI	GRGCYC	1 cut(s)	2012
Fsp4HI	GCNGC	4 cut(s)	1155, 1403, 1644, 1875
FspBI	CTAG	3 cut(s)	1101, 1920, 2127
GlaI	GCGC	1 cut(s)	800
GluI	GCNGC	4 cut(s)	1155, 1403, 1644, 1875
GsaI	CCCAGC	1 cut(s)	1713
GsuI	CTGGAG	2 cut(s)	1047, 1314
HaeII	RGCGCY	1 cut(s)	802
HaeIII	GGCC	3 cut(s)	340, 480, 1112
HapII	CCGG	4 cut(s)	91, 341, 1526, 1927
HhaI	GCGC	1 cut(s)	801
Hin1I	GRCGYC	1 cut(s)	799
Hin6I	GCGC	1 cut(s)	799
HinP1I	GCGC	1 cut(s)	799
HindIII	AAGCTT	2 cut(s)	1183, 1519
HinfI	GANTC	6 cut(s)	30, 274, 450, 1026, 1286, 1549
HpaII	CCGG	4 cut(s)	91, 341, 1526, 1927
HphI	GGTGA	3 cut(s)	816, 1402, 1943
Hpy166II	GTNNAC	6 cut(s)	309, 393, 1058, 1669, 2003, 2144
Hpy188I	TCNGA	4 cut(s)	1050, 1813, 2023, 2076
Hpy188III	TCNNGA	5 cut(s)	34, 103, 1250, 1633, 1796
Hpy8I	GTNNAC	6 cut(s)	309, 393, 1058, 1669, 2003, 2144
Hpy99I	CGWCG	1 cut(s)	1895
HpyAV	CCTTC	8 cut(s)	491, 591, 1005, 1266, 1276, 1513, 1802, 2131
HpyF10VI	GCNNNNNNNGC	6 cut(s)	374, 502, 871, 1508, 1527, 1883
HpyF3I	CTNAG	9 cut(s)	364, 963, 1263, 1406, 1810, 2020, 2045, 2054, 2148
Hsp92I	GRCGYC	1 cut(s)	799
HspAI	GCGC	1 cut(s)	799
KasI	GGCGCC	1 cut(s)	798
Ksp22I	TGATCA	1 cut(s)	1731
Kzo9I	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
LguI	GCTCTTC	3 cut(s)	365, 503, 1565
LmnI	GCTCC	9 cut(s)	118, 440, 830, 893, 1333, 1436, 1448, 1573, 1743
Lsp1109I	GCAGC	2 cut(s)	1166, 1655
LweI	GCATC	2 cut(s)	1795, 1886
MaeI	CTAG	3 cut(s)	1101, 1920, 2127
MaeIII	GTNAC	5 cut(s)	62, 687, 822, 1128, 1147
MalI	GATC	7 cut(s)	42, 352, 737, 1011, 1472, 1733, 1937
MboI	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
MflI	RGATCY	1 cut(s)	1470
MhlI	GDGCHC	2 cut(s)	1789, 2012
MlsI	TGGCCA	1 cut(s)	1112
MluNI	TGGCCA	1 cut(s)	1112
Mly113I	GGCGCC	1 cut(s)	799
MmeI	TCCRAC	1 cut(s)	1426
Mox20I	TGGCCA	1 cut(s)	1112
Mph1103I	ATGCAT	2 cut(s)	389, 1098
MscI	TGGCCA	1 cut(s)	1112
MseI	TTAA	4 cut(s)	321, 978, 1464, 1727
MslI	CAYNNNNRTG	4 cut(s)	314, 382, 1613, 2046
Msp20I	TGGCCA	1 cut(s)	1112
MspA1I	CMGCKG	2 cut(s)	764, 1402
MspI	CCGG	4 cut(s)	91, 341, 1526, 1927
MspR9I	CCNGG	5 cut(s)	92, 828, 1527, 1742, 1928
Mva1269I	GAATGC	1 cut(s)	896
MvaI	CCWGG	2 cut(s)	828, 1742
MwoI	GCNNNNNNNGC	6 cut(s)	374, 502, 871, 1508, 1527, 1883
NarI	GGCGCC	1 cut(s)	799
NciI	CCSGG	3 cut(s)	92, 1527, 1928
NcoI	CCATGG	1 cut(s)	818
NdeI	CATATG	1 cut(s)	1227
NdeII	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
NlaIV	GGNNCC	7 cut(s)	114, 800, 1254, 1450, 1569, 1746, 1827
NmuCI	GTSAC	2 cut(s)	687, 822
NsiI	ATGCAT	2 cut(s)	389, 1098
NspI	RCATGY	6 cut(s)	391, 865, 1210, 1443, 1946, 2001
OliI	CACNNNNGTG	1 cut(s)	1613
PaeI	GCATGC	1 cut(s)	1210
PaqCI	CACCTGC	1 cut(s)	1837
PciI	ACATGT	1 cut(s)	1997
PciSI	GCTCTTC	3 cut(s)	365, 503, 1565
PctI	GAATGC	1 cut(s)	896
PfeI	GAWTC	6 cut(s)	30, 274, 450, 1026, 1286, 1549
PflMI	CCANNNNNTGG	1 cut(s)	1070
PkrI	GCNGC	4 cut(s)	1156, 1404, 1645, 1876
PluTI	GGCGCC	1 cut(s)	802
PscI	ACATGT	1 cut(s)	1997
PshAI	GACNNNNGTC	1 cut(s)	851
PshBI	ATTAAT	1 cut(s)	1727
PsiI	TTATAA	1 cut(s)	443
Psp6I	CCWGG	2 cut(s)	826, 1740
PspEI	GGTNACC	1 cut(s)	822
PspFI	CCCAGC	1 cut(s)	1709
PspGI	CCWGG	2 cut(s)	826, 1740
PspN4I	GGNNCC	7 cut(s)	114, 800, 1254, 1450, 1569, 1746, 1827
PspPI	GGNCC	1 cut(s)	741
PstNI	CAGNNNCTG	1 cut(s)	268
PsuI	RGATCY	1 cut(s)	1470
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	5 cut(s)	18, 308, 1485, 1626, 1670
RsaNI	GTAC	5 cut(s)	17, 307, 1484, 1625, 1669
RseI	CAYNNNNRTG	4 cut(s)	314, 382, 1613, 2046
SapI	GCTCTTC	3 cut(s)	365, 503, 1565
SaqAI	TTAA	4 cut(s)	321, 978, 1464, 1727
SatI	GCNGC	4 cut(s)	1155, 1403, 1644, 1875
Sau3AI	GATC	7 cut(s)	40, 350, 735, 1009, 1470, 1731, 1935
Sau96I	GGNCC	1 cut(s)	741
ScaI	AGTACT	1 cut(s)	1485
ScrFI	CCNGG	5 cut(s)	92, 828, 1527, 1742, 1928
SduI	GDGCHC	2 cut(s)	1789, 2012
SfaNI	GCATC	2 cut(s)	1795, 1886
SfoI	GGCGCC	1 cut(s)	800
SinI	GGWCC	1 cut(s)	741
SmiMI	CAYNNNNRTG	4 cut(s)	314, 382, 1613, 2046
SmlI	CTYRAG	1 cut(s)	1592
SmoI	CTYRAG	1 cut(s)	1592
SphI	GCATGC	1 cut(s)	1210
SsiI	CCGC	6 cut(s)	464, 744, 920, 1402, 1511, 1874
SspDI	GGCGCC	1 cut(s)	798
SspMI	CTAG	3 cut(s)	1101, 1920, 2127
StyD4I	CCNGG	5 cut(s)	90, 826, 1525, 1740, 1926
StyI	CCWWGG	3 cut(s)	794, 818, 1986
TaqI	TCGA	2 cut(s)	46, 1141
TatI	WGTACW	3 cut(s)	306, 1483, 1668
TauI	GCSGC	2 cut(s)	1405, 1877
TfiI	GAWTC	6 cut(s)	30, 274, 450, 1026, 1286, 1549
Tru1I	TTAA	4 cut(s)	321, 978, 1464, 1727
Tru9I	TTAA	4 cut(s)	321, 978, 1464, 1727
TscAI	CASTG	7 cut(s)	729, 882, 1122, 1350, 2019, 2053, 2086
TseFI	GTSAC	2 cut(s)	687, 822
TseI	GCWGC	2 cut(s)	1154, 1643
Tsp45I	GTSAC	2 cut(s)	687, 822
TspDTI	ATGAA	9 cut(s)	147, 304, 490, 573, 691, 889, 1018, 1495, 1833
TspGWI	ACGGA	2 cut(s)	200, 1908
TspRI	CASTG	7 cut(s)	729, 882, 1122, 1350, 2019, 2053, 2086
Van91I	CCANNNNNTGG	1 cut(s)	1070
VpaK11BI	GGWCC	1 cut(s)	741
VspI	ATTAAT	1 cut(s)	1727
XapI	RAATTY	5 cut(s)	562, 789, 974, 1899, 1991
XceI	RCATGY	6 cut(s)	391, 865, 1210, 1443, 1946, 2001
XmiI	GTMKAC	2 cut(s)	1057, 2002
XspI	CTAG	3 cut(s)	1101, 1920, 2127
ZrmI	AGTACT	1 cut(s)	1485
Zsp2I	ATGCAT	2 cut(s)	389, 1098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.